View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20721_high_4 (Length: 669)

Name: NF20721_high_4
Description: NF20721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20721_high_4
NF20721_high_4
[»] chr2 (49 HSPs)
chr2 (72-605)||(10840294-10840832)
chr2 (285-409)||(6846798-6846922)
chr2 (277-397)||(2940961-2941082)
chr2 (320-409)||(10841701-10841790)
chr2 (276-409)||(11689555-11689688)
chr2 (276-397)||(11721371-11721492)
chr2 (277-333)||(15848178-15848234)
chr2 (277-333)||(37895629-37895685)
chr2 (277-400)||(6848016-6848139)
chr2 (286-402)||(16099076-16099192)
chr2 (277-333)||(36382251-36382307)
chr2 (277-333)||(39423605-39423661)
chr2 (277-333)||(44714043-44714099)
chr2 (275-333)||(6577557-6577615)
chr2 (6-47)||(10840832-10840873)
chr2 (277-333)||(2318248-2318304)
chr2 (278-338)||(3653363-3653423)
chr2 (277-333)||(10712813-10712869)
chr2 (277-333)||(36479808-36479864)
chr2 (277-333)||(36755183-36755239)
chr2 (286-333)||(6657968-6658015)
chr2 (284-399)||(11349494-11349609)
chr2 (286-333)||(39498400-39498447)
chr2 (286-332)||(14900743-14900789)
chr2 (286-332)||(33739794-33739840)
chr2 (288-333)||(11163316-11163361)
chr2 (283-360)||(25623351-25623428)
chr2 (294-397)||(16105578-16105681)
chr2 (291-338)||(17266483-17266530)
chr2 (278-409)||(25231131-25231262)
chr2 (286-332)||(13995933-13995979)
chr2 (275-333)||(25892484-25892542)
chr2 (286-332)||(33062310-33062356)
chr2 (286-332)||(41248819-41248865)
chr2 (277-338)||(11347508-11347569)
chr2 (283-332)||(44045290-44045339)
chr2 (277-333)||(34447903-34447958)
chr2 (277-332)||(15848370-15848425)
chr2 (277-332)||(34448077-34448132)
chr2 (286-332)||(1696000-1696046)
chr2 (621-651)||(10840252-10840282)
chr2 (287-337)||(25624397-25624447)
chr2 (275-333)||(25893498-25893556)
chr2 (275-332)||(44044205-44044262)
chr2 (288-333)||(45556202-45556247)
chr2 (285-333)||(6573136-6573184)
chr2 (294-338)||(17266629-17266673)
chr2 (277-329)||(22051088-22051140)
chr2 (277-333)||(22051276-22051331)
[»] chr4 (58 HSPs)
chr4 (83-190)||(32063472-32063575)
chr4 (282-405)||(41583518-41583641)
chr4 (278-397)||(52298269-52298388)
chr4 (277-333)||(14801826-14801882)
chr4 (277-333)||(34765662-34765718)
chr4 (282-405)||(40387485-40387608)
chr4 (276-366)||(7280387-7280477)
chr4 (280-338)||(52298111-52298169)
chr4 (275-332)||(16605693-16605750)
chr4 (275-340)||(48529856-48529921)
chr4 (277-333)||(24411448-24411504)
chr4 (277-333)||(35028280-35028336)
chr4 (277-393)||(41582477-41582593)
chr4 (277-333)||(53701902-53701958)
chr4 (278-332)||(24349765-24349819)
chr4 (276-409)||(11857906-11858039)
chr4 (283-360)||(23455649-23455726)
chr4 (277-333)||(15507955-15508011)
chr4 (277-329)||(17356204-17356256)
chr4 (277-333)||(37976435-37976491)
chr4 (286-334)||(43155787-43155835)
chr4 (277-333)||(52909343-52909399)
chr4 (286-333)||(13058127-13058174)
chr4 (286-333)||(23613399-23613446)
chr4 (286-333)||(36009104-36009151)
chr4 (286-333)||(49879467-49879514)
chr4 (286-332)||(4982986-4983032)
chr4 (286-332)||(9145026-9145072)
chr4 (286-332)||(27934623-27934669)
chr4 (286-332)||(42738291-42738337)
chr4 (287-333)||(44967330-44967376)
chr4 (283-333)||(55867402-55867452)
chr4 (277-325)||(53129788-53129836)
chr4 (286-333)||(5369037-5369084)
chr4 (286-333)||(18831439-18831486)
chr4 (286-333)||(24711201-24711248)
chr4 (275-338)||(48528557-48528620)
chr4 (286-333)||(50418928-50418975)
chr4 (281-332)||(56014816-56014867)
chr4 (286-332)||(9400779-9400825)
chr4 (278-332)||(10781767-10781821)
chr4 (286-332)||(22566890-22566936)
chr4 (286-332)||(32950233-32950279)
chr4 (286-332)||(33247533-33247579)
chr4 (286-332)||(34837334-34837380)
chr4 (278-332)||(54434280-54434334)
chr4 (277-338)||(30642428-30642489)
chr4 (277-338)||(40388388-40388449)
chr4 (277-333)||(35508522-35508578)
chr4 (289-333)||(37248326-37248370)
chr4 (277-333)||(54086977-54087033)
chr4 (275-331)||(54435377-54435433)
chr4 (277-332)||(8439506-8439561)
chr4 (277-332)||(46661196-46661251)
chr4 (281-332)||(56015933-56015984)
chr4 (291-333)||(16005928-16005970)
chr4 (286-332)||(38012261-38012307)
chr4 (320-409)||(7280223-7280312)
[»] chr3 (43 HSPs)
chr3 (81-190)||(6956438-6956543)
chr3 (287-409)||(14634044-14634166)
chr3 (276-361)||(30380908-30380993)
chr3 (277-334)||(33689661-33689718)
chr3 (276-338)||(20704608-20704670)
chr3 (275-333)||(33156274-33156332)
chr3 (281-409)||(20704444-20704572)
chr3 (277-333)||(23458261-23458317)
chr3 (277-333)||(26463880-26463936)
chr3 (277-333)||(40758234-40758290)
chr3 (277-332)||(9367832-9367887)
chr3 (282-333)||(51994173-51994224)
chr3 (283-360)||(32717065-32717142)
chr3 (277-338)||(41988047-41988108)
chr3 (277-333)||(9294240-9294296)
chr3 (278-338)||(39399375-39399435)
chr3 (278-338)||(54317914-54317974)
chr3 (286-333)||(2796269-2796316)
chr3 (286-332)||(8041707-8041753)
chr3 (286-332)||(10770751-10770797)
chr3 (283-337)||(29192121-29192175)
chr3 (286-332)||(36314558-36314604)
chr3 (286-332)||(48322637-48322683)
chr3 (286-332)||(54466514-54466560)
chr3 (277-405)||(40506069-40506198)
chr3 (277-333)||(43384373-43384429)
chr3 (282-338)||(44654790-44654846)
chr3 (286-333)||(19741183-19741230)
chr3 (283-405)||(25107231-25107353)
chr3 (277-338)||(42854520-42854579)
chr3 (283-399)||(21783783-21783899)
chr3 (275-332)||(25108375-25108432)
chr3 (288-333)||(46474905-46474950)
chr3 (277-333)||(53756834-53756890)
chr3 (283-350)||(2943986-2944053)
chr3 (276-338)||(4521762-4521825)
chr3 (277-332)||(23458070-23458125)
chr3 (277-332)||(46475063-46475118)
chr3 (286-333)||(55052539-55052586)
chr3 (278-332)||(21185978-21186032)
chr3 (283-337)||(32716335-32716389)
chr3 (291-333)||(40033752-40033794)
chr3 (81-119)||(43608646-43608684)
[»] chr1 (63 HSPs)
chr1 (277-407)||(27999133-27999262)
chr1 (276-409)||(42267317-42267450)
chr1 (277-405)||(17662132-17662260)
chr1 (275-409)||(34850345-34850479)
chr1 (277-333)||(4960630-4960686)
chr1 (282-409)||(34849025-34849152)
chr1 (276-397)||(22103787-22103908)
chr1 (277-333)||(6367652-6367708)
chr1 (276-339)||(21444678-21444741)
chr1 (286-405)||(25647902-25648021)
chr1 (279-333)||(40210654-40210708)
chr1 (276-409)||(13245864-13245997)
chr1 (277-333)||(13914349-13914405)
chr1 (277-349)||(16970817-16970889)
chr1 (277-333)||(24009823-24009879)
chr1 (277-333)||(42248563-42248619)
chr1 (287-338)||(10304008-10304059)
chr1 (277-332)||(37578474-37578529)
chr1 (280-409)||(9443586-9443715)
chr1 (277-334)||(19017911-19017968)
chr1 (286-334)||(183482-183530)
chr1 (277-333)||(1103551-1103607)
chr1 (277-333)||(1841549-1841605)
chr1 (277-333)||(14879061-14879117)
chr1 (277-333)||(30711417-30711473)
chr1 (277-333)||(32917350-32917406)
chr1 (277-333)||(34464731-34464787)
chr1 (277-333)||(43758912-43758968)
chr1 (287-338)||(10304147-10304198)
chr1 (286-332)||(24905427-24905473)
chr1 (286-332)||(28011454-28011500)
chr1 (286-332)||(31514577-31514623)
chr1 (286-332)||(33442854-33442900)
chr1 (277-333)||(35152433-35152489)
chr1 (285-405)||(40435363-40435483)
chr1 (286-334)||(47999383-47999431)
chr1 (286-333)||(26024513-26024560)
chr1 (286-332)||(4716728-4716774)
chr1 (283-337)||(13295221-13295275)
chr1 (279-337)||(25065019-25065077)
chr1 (275-337)||(25065910-25065972)
chr1 (275-333)||(44523416-44523474)
chr1 (286-332)||(52134159-52134205)
chr1 (288-333)||(19515909-19515954)
chr1 (276-397)||(32927284-32927405)
chr1 (288-333)||(36694541-36694586)
chr1 (288-333)||(36710642-36710687)
chr1 (288-333)||(40772597-40772642)
chr1 (277-333)||(41098823-41098879)
chr1 (277-333)||(46163120-46163176)
chr1 (281-329)||(48691242-48691290)
chr1 (277-333)||(48779207-48779263)
chr1 (277-332)||(1841741-1841796)
chr1 (277-332)||(6367844-6367899)
chr1 (277-332)||(14879253-14879308)
chr1 (276-331)||(31197152-31197207)
chr1 (277-332)||(48779401-48779456)
chr1 (276-338)||(19227047-19227109)
chr1 (288-330)||(23209620-23209662)
chr1 (283-332)||(42534303-42534352)
chr1 (277-333)||(7821044-7821100)
chr1 (321-409)||(32928140-32928228)
chr1 (277-333)||(34464539-34464595)
[»] chr6 (28 HSPs)
chr6 (276-409)||(1215147-1215280)
chr6 (276-405)||(26463197-26463326)
chr6 (277-333)||(12080726-12080782)
chr6 (277-333)||(21627995-21628051)
chr6 (277-333)||(33517624-33517680)
chr6 (278-409)||(10782423-10782553)
chr6 (277-334)||(33647052-33647109)
chr6 (277-333)||(30725849-30725905)
chr6 (277-333)||(30803951-30804007)
chr6 (278-333)||(3059347-3059402)
chr6 (286-332)||(28000645-28000691)
chr6 (286-332)||(30337540-30337586)
chr6 (286-333)||(17734454-17734501)
chr6 (276-339)||(33648746-33648809)
chr6 (286-332)||(363090-363136)
chr6 (286-332)||(14196875-14196921)
chr6 (277-338)||(24210616-24210677)
chr6 (277-333)||(11392928-11392984)
chr6 (7-58)||(34535591-34535640)
chr6 (277-332)||(11434893-11434948)
chr6 (277-332)||(21627804-21627859)
chr6 (286-332)||(25486188-25486232)
chr6 (275-338)||(28498305-28498368)
chr6 (275-338)||(29810716-29810779)
chr6 (277-332)||(30726041-30726096)
chr6 (277-332)||(30804143-30804198)
chr6 (277-332)||(33517816-33517871)
chr6 (283-332)||(11435957-11436006)
[»] scaffold0031 (1 HSPs)
scaffold0031 (277-405)||(68983-69111)
[»] chr8 (42 HSPs)
chr8 (276-409)||(22890275-22890408)
chr8 (277-333)||(4405942-4405998)
chr8 (277-333)||(16388808-16388864)
chr8 (277-333)||(36928566-36928622)
chr8 (277-331)||(31608795-31608849)
chr8 (277-333)||(13186150-13186206)
chr8 (277-409)||(31873181-31873313)
chr8 (277-333)||(35756672-35756728)
chr8 (277-333)||(39071766-39071822)
chr8 (289-333)||(12273147-12273191)
chr8 (286-333)||(1425313-1425360)
chr8 (286-333)||(23663805-23663852)
chr8 (286-332)||(3041716-3041762)
chr8 (276-338)||(24085859-24085921)
chr8 (286-332)||(36325325-36325371)
chr8 (286-332)||(38845559-38845605)
chr8 (287-333)||(38862708-38862754)
chr8 (286-332)||(40775910-40775956)
chr8 (286-332)||(44407117-44407163)
chr8 (276-397)||(20050109-20050234)
chr8 (277-333)||(36186349-36186405)
chr8 (277-333)||(40318246-40318302)
chr8 (286-333)||(8316879-8316926)
chr8 (286-333)||(22915649-22915696)
chr8 (286-333)||(23698535-23698582)
chr8 (286-332)||(2266583-2266629)
chr8 (287-333)||(2534785-2534831)
chr8 (286-332)||(11674786-11674831)
chr8 (280-409)||(9499883-9500011)
chr8 (287-332)||(12199211-12199256)
chr8 (287-332)||(12443639-12443684)
chr8 (288-332)||(35449871-35449915)
chr8 (277-332)||(8747546-8747601)
chr8 (276-339)||(11291192-11291255)
chr8 (277-332)||(23663636-23663691)
chr8 (283-350)||(34213837-34213904)
chr8 (277-332)||(36928758-36928813)
chr8 (280-338)||(2693802-2693860)
chr8 (287-333)||(38955793-38955839)
chr8 (81-137)||(1231854-1231911)
chr8 (275-332)||(20385659-20385716)
chr8 (277-333)||(4994939-4994995)
[»] scaffold0005 (1 HSPs)
scaffold0005 (277-333)||(37845-37901)
[»] chr5 (55 HSPs)
chr5 (277-333)||(32242332-32242388)
chr5 (295-409)||(5326071-5326185)
chr5 (282-400)||(15644999-15645117)
chr5 (277-333)||(5993979-5994035)
chr5 (277-397)||(12904780-12904900)
chr5 (277-405)||(20840551-20840679)
chr5 (277-333)||(35512238-35512294)
chr5 (286-405)||(3529133-3529252)
chr5 (277-333)||(5024300-5024356)
chr5 (277-333)||(11047527-11047583)
chr5 (277-333)||(13962954-13963010)
chr5 (277-333)||(14194705-14194761)
chr5 (277-405)||(16157137-16157265)
chr5 (277-333)||(19892590-19892646)
chr5 (277-333)||(29646644-29646700)
chr5 (277-333)||(38442158-38442214)
chr5 (277-333)||(39453390-39453446)
chr5 (282-333)||(24547412-24547463)
chr5 (286-332)||(297274-297320)
chr5 (286-332)||(6758125-6758171)
chr5 (280-338)||(14848992-14849050)
chr5 (287-333)||(38475291-38475337)
chr5 (286-332)||(41930607-41930653)
chr5 (277-334)||(18247173-18247230)
chr5 (283-360)||(20856995-20857072)
chr5 (283-360)||(22869668-22869745)
chr5 (283-360)||(22870422-22870499)
chr5 (288-333)||(28269681-28269726)
chr5 (288-333)||(28771131-28771176)
chr5 (277-333)||(186509-186565)
chr5 (277-333)||(8322494-8322550)
chr5 (277-333)||(17202489-17202545)
chr5 (277-333)||(20814417-20814473)
chr5 (288-332)||(31482664-31482708)
chr5 (286-333)||(27587238-27587285)
chr5 (286-332)||(1506058-1506104)
chr5 (291-333)||(35920480-35920522)
chr5 (288-333)||(6150544-6150589)
chr5 (287-360)||(20857511-20857584)
chr5 (277-333)||(13362510-13362566)
chr5 (293-409)||(14848753-14848869)
chr5 (277-332)||(6150702-6150757)
chr5 (277-332)||(11047719-11047774)
chr5 (286-333)||(11761839-11761886)
chr5 (277-332)||(16156946-16157001)
chr5 (277-332)||(20814226-20814281)
chr5 (277-332)||(28269513-28269568)
chr5 (277-332)||(39453581-39453636)
chr5 (277-332)||(43159096-43159151)
chr5 (287-333)||(16083067-16083113)
chr5 (277-323)||(27937301-27937347)
chr5 (288-333)||(18670289-18670334)
chr5 (81-137)||(21978411-21978468)
chr5 (277-332)||(13362318-13362373)
chr5 (283-331)||(20072213-20072261)
[»] chr7 (55 HSPs)
chr7 (287-398)||(13311325-13311436)
chr7 (278-409)||(20563748-20563879)
chr7 (275-405)||(5457187-5457317)
chr7 (275-349)||(11397452-11397526)
chr7 (283-405)||(27396883-27397005)
chr7 (287-400)||(11400261-11400373)
chr7 (277-333)||(3914228-3914284)
chr7 (285-409)||(15714582-15714706)
chr7 (277-333)||(28469290-28469346)
chr7 (277-333)||(32053425-32053481)
chr7 (277-333)||(40379859-40379915)
chr7 (277-333)||(42731509-42731565)
chr7 (277-333)||(10935884-10935940)
chr7 (277-333)||(45010688-45010744)
chr7 (285-400)||(7354885-7355000)
chr7 (286-333)||(17102110-17102157)
chr7 (286-333)||(27991829-27991876)
chr7 (283-337)||(12644093-12644147)
chr7 (286-332)||(30948420-30948466)
chr7 (286-332)||(32680855-32680901)
chr7 (283-333)||(43124440-43124490)
chr7 (283-337)||(45914610-45914664)
chr7 (283-360)||(4226188-4226265)
chr7 (283-360)||(12643163-12643240)
chr7 (284-333)||(45010893-45010942)
chr7 (277-333)||(2640460-2640516)
chr7 (277-333)||(23181276-23181332)
chr7 (277-333)||(24388909-24388965)
chr7 (283-403)||(32688506-32688626)
chr7 (277-337)||(38643636-38643696)
chr7 (286-405)||(6571031-6571150)
chr7 (286-333)||(32298996-32299043)
chr7 (275-409)||(18670143-18670277)
chr7 (286-332)||(34928910-34928956)
chr7 (286-332)||(39686794-39686840)
chr7 (275-337)||(45915760-45915822)
chr7 (283-332)||(17886778-17886827)
chr7 (288-333)||(22871570-22871615)
chr7 (320-409)||(23608985-23609074)
chr7 (277-326)||(37656949-37656998)
chr7 (283-360)||(47558093-47558170)
chr7 (282-338)||(20426617-20426673)
chr7 (277-333)||(42019879-42019935)
chr7 (277-332)||(2640269-2640324)
chr7 (286-333)||(6253561-6253608)
chr7 (277-332)||(17885719-17885774)
chr7 (286-333)||(19204579-19204626)
chr7 (277-332)||(42731701-42731756)
chr7 (282-400)||(18855433-18855551)
chr7 (343-409)||(23608822-23608888)
chr7 (277-338)||(12229354-12229415)
chr7 (277-337)||(17203655-17203715)
chr7 (283-331)||(27480079-27480127)
chr7 (280-338)||(41075566-41075621)
chr7 (277-333)||(48789085-48789141)
[»] scaffold0347 (2 HSPs)
scaffold0347 (279-360)||(13672-13753)
scaffold0347 (275-360)||(14545-14630)
[»] scaffold0007 (1 HSPs)
scaffold0007 (286-333)||(1859-1906)
[»] scaffold0559 (1 HSPs)
scaffold0559 (286-332)||(1324-1370)
[»] scaffold0024 (1 HSPs)
scaffold0024 (286-332)||(141854-141900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (286-332)||(139763-139809)
[»] scaffold0295 (1 HSPs)
scaffold0295 (277-334)||(2232-2289)
[»] scaffold0205 (1 HSPs)
scaffold0205 (286-332)||(21229-21275)
[»] scaffold0008 (1 HSPs)
scaffold0008 (275-404)||(239831-239960)
[»] scaffold0181 (1 HSPs)
scaffold0181 (276-336)||(9294-9353)
[»] scaffold0100 (1 HSPs)
scaffold0100 (307-397)||(31218-31308)
[»] scaffold0027 (1 HSPs)
scaffold0027 (280-338)||(14076-14133)
[»] scaffold0220 (1 HSPs)
scaffold0220 (277-338)||(23316-23377)


Alignment Details
Target: chr2 (Bit Score: 454; Significance: 0; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 72 - 605
Target Start/End: Complemental strand, 10840832 - 10840294
Alignment:
Q  72 ctctttctgggttgttgggtttgatgctcagcaagaatgtttcatggaggttggttctggaagattatacgggaaagggagagagaaaaagagagattgc 171  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10840832 ctctttctgggttgttgggtttgatgctcagcaagagtgtttcatggaggttggttctggaagattatacgggaaagggagagagaaaaagagagattgc 10840733  T
Q  172 aatctgggttttggagaagaaacaagaataaaggggcaaaagggtaattttgcatgtgtcagacctcattaagggcaaaaaagtcattccattccat--- 268  Q
    ||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       
T  10840732 aatttgggttttggagaaggaacaagaataaaggagcaaaagggtaatttcgcatgtgtcagacctcattaagggcaaaaaagtcattccattccattcc 10840633  T
Q  269 --atgtttctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaat 366  Q
      ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10840632 atatgtttctaattagtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgtcaggattaatgaat 10840533  T
Q  367 taaggaaccaaattttaaatgacccctatttgcaaggattaaaactcaagctcaagtttaaaatacgtgatgaaaaagtaccagtcaaaactcaagaaac 466  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10840532 taaggaaccaaattttaaatgacccctatttgcaaggactaaaactcaagctcaagtttaaaatacgtgatgaaaaagtaccactcaaaactcaagaaac 10840433  T
Q  467 tcaagtttaaaggagttgtacttgtgnnnnnnngaaagataaaagtcaatatttctacacaattgtaatacgtacaatgttgtatgagactgacgaaaca 566  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10840432 tcaagtttaaaggagttgtacttgtgaaaaaaagaaagataaaagtcaatatttctacacaattgtaatacgtacaatgttgtatgagactaacgaaaca 10840333  T
Q  567 aagtcttttggaagatgcaacgaaaaagtaaacctagag 605  Q
    || ||||||||||||||||||||||||||||||||||||    
T  10840332 aaatcttttggaagatgcaacgaaaaagtaaacctagag 10840294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 285 - 409
Target Start/End: Complemental strand, 6846922 - 6846798
Alignment:
Q  285 acgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaa 384  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| || | |||||||   ||||||| ||||| | | ||||| ||||||    
T  6846922 acgtggcagtaattaagtgggaagagggacgaaattttaaatgattcaattttgcagggacaaaatgcccggattaacgaattcaaggaccaatttttaa 6846823  T
Q  385 atgacccctatttgcaaggattaaa 409  Q
    |||||||||||||||| ||||||||    
T  6846822 atgacccctatttgcagggattaaa 6846798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 277 - 397
Target Start/End: Complemental strand, 2941082 - 2940961
Alignment:
Q  277 aattagtgacgtggcagtgattaagtggga-agagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    ||||||||||||| || ||||||||||||  |||||||| ||| ||||||||| ||||||||| ||||  |||||| |||||||||  |||| ||| |||    
T  2941082 aattagtgacgtgacactgattaagtgggggagagggaccaaattttaaatgaataaattttgtagtgataaaatgctaggattaacaaattcagggacc 2940983  T
Q  376 aaattttaaatgacccctattt 397  Q
    ||||||||||||||||||||||    
T  2940982 aaattttaaatgacccctattt 2940961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 320 - 409
Target Start/End: Original strand, 10841701 - 10841790
Alignment:
Q  320 tttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccctatttgcaaggattaaa 409  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||| ||| |  ||||||||||||||||||||||||| ||| ||||    
T  10841701 tttaaatgattaaattttgaagtggcaaaatgccaggattaacgaattcagggataaaattttaaatgacccctatttgcagggactaaa 10841790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 276 - 409
Target Start/End: Complemental strand, 11689688 - 11689555
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||    | |||||||   ||||||| ||||  ||| | |    
T  11689688 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaattttggcaggacaaaatgccgggattaaagaatacagggatc 11689589  T
Q  376 aaattttaaatgacccctatttgcaaggattaaa 409  Q
    || ||||||||||||||||||| |||||| ||||    
T  11689588 aatttttaaatgacccctatttccaaggactaaa 11689555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 276 - 397
Target Start/End: Original strand, 11721371 - 11721492
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| ||||| |||||||||||||    |  ||||||| |||||||| ||||  ||| | |    
T  11721371 taattagtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaattttggcaggataaaatgtcaggattaaagaatacagggatc 11721470  T
Q  376 aaattttaaatgacccctattt 397  Q
    || |||||||||||||||||||    
T  11721471 aatttttaaatgacccctattt 11721492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 15848234 - 15848178
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  15848234 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 15848178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 37895629 - 37895685
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  37895629 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 37895685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 400
Target Start/End: Original strand, 6848016 - 6848139
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    ||||| |||||||| ||| ||||||||||  || |||||||| ||||||||||||||||||  || | |||||||| |||||||| ||||| |   ||||    
T  6848016 aattactgacgtggtagtaattaagtggggtgatggacgaaattttaaatgattaaatttttcagggacaaaatgtcaggattaacgaattcaatgacca 6848115  T
Q  377 aattttaaatgacccctatttgca 400  Q
    | ||||||||||||| ||||||||    
T  6848116 atttttaaatgacccttatttgca 6848139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 286 - 402
Target Start/End: Complemental strand, 16099192 - 16099076
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaa 385  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||   || || || ||| ||  ||||||| ||| |  ||| ||||| |||||||    
T  16099192 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagtgattacagggaccaatttttaaa 16099093  T
Q  386 tgacccctatttgcaag 402  Q
    ||||||||| |||||||    
T  16099092 tgacccctaattgcaag 16099076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 36382307 - 36382251
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  36382307 aattagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaa 36382251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 39423661 - 39423605
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  39423661 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaa 39423605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 44714043 - 44714099
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  44714043 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaa 44714099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 6577557 - 6577615
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  6577557 ctaattagtgacgtggcagtgattaagtgggaagagggacggatttttaaataattaaa 6577615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 10840873 - 10840832
Alignment:
Q  6 gtgagatgaatactgaaaacacagttatcactttgaagatgc 47  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10840873 gtgagatgaatactgaaaacacagttatcactttgaagatgc 10840832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 2318304 - 2318248
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||| | |||||||||| |||||||||||| ||||||||||||||    
T  2318304 aattagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaaa 2318248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 3653363 - 3653423
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||| ||||    
T  3653363 attagtgacgtggtagtgattaacttggaagagggacgaaattttaaatgattaaactttg 3653423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 10712869 - 10712813
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||    
T  10712869 aattagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaaa 10712813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 36479864 - 36479808
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||    
T  36479864 aattagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaa 36479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 36755239 - 36755183
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||    
T  36755239 aattagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaaa 36755183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 6658015 - 6657968
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6658015 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 6657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 11349494 - 11349609
Alignment:
Q  284 gacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaatttta 383  Q
    ||||||||| ||||||| ||||  ||||||||||| ||||||||||||||||||  ||   |||| ||| |||||||| ||||| |   | |||||||||    
T  11349494 gacgtggcactgattaactgggttgagggacgaaattttaaatgattaaattttataggtacaaactgtcaggattaacgaattcaaagatcaaatttta 11349593  T
Q  384 aatgacccctatttgc 399  Q
    |||||| |||||||||    
T  11349594 aatgactcctatttgc 11349609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 39498447 - 39498400
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  39498447 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 39498400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 14900743 - 14900789
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  14900743 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 14900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 33739840 - 33739794
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  33739840 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 11163316 - 11163361
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  11163316 tggcagtgattaagtggggagagggacgaaattttaaatgattaaa 11163361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 25623428 - 25623351
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||||||  ||| |||||||||||| ||||||||||||| ||||  || |||||||||  |||||||    
T  25623428 tgacgtggcagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggcaaaatgggaggatta 25623351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 397
Target Start/End: Complemental strand, 16105681 - 16105578
Alignment:
Q  294 tgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccct 393  Q
    ||||||||||||  ||| ||| ||| |||||||||||||||||||    |||||||||| |||||||| ||||  ||| ||||  ||||||||| |||||    
T  16105681 tgattaagtggggggagagactaaattttaaatgattaaattttgggagggcaaaatgtcaggattaaggaatgcagggaccattttttaaatggcccct 16105582  T
Q  394 attt 397  Q
    ||||    
T  16105581 attt 16105578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 17266530 - 17266483
Alignment:
Q  291 cagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  17266530 cagtgattaagtggggagagggaccaaattttaaatgattaaattttg 17266483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 409
Target Start/End: Original strand, 25231131 - 25231262
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaa 377  Q
    |||| |||||||||||| ||||| |||||  |||||||||| |||||||||||||| |||| |  || ||  || ||||||||  ||||  | | |||||    
T  25231131 attaatgacgtggcagtcattaactgggacaagggacgaaattttaaatgattaaagtttgcaagggtaatttgctaggattagcgaatacatggaccaa 25231230  T
Q  378 attttaaatgacccctatttgcaaggattaaa 409  Q
     ||||||| |||||||| ||||| ||||||||    
T  25231231 tttttaaacgacccctaattgcagggattaaa 25231262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 13995933 - 13995979
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  13995933 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 13995979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 25892542 - 25892484
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||| ||||||| ||| |||||||||| |||||||||||  ||||||||||||||    
T  25892542 ctaattagagacgtggtagtaattaagtggggagagggacgaatttttaaatgattaaa 25892484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 33062310 - 33062356
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||    
T  33062310 cgtggcagtgattaagtggggagagggacgaaattataaatgattaa 33062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 41248819 - 41248865
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  41248819 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 41248865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 11347569 - 11347508
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||| ||||||||| ||||||| | || |||| ||||||| |||||||||||||||||||    
T  11347569 aattagcgacgtggcactgattaattagggagagagacgaaattttaaatgattaaattttg 11347508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 44045290 - 44045339
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||||||||||    
T  44045290 tgacgtggcagtgattaactgggatgagggacaaaattttaaatgattaa 44045339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 34447958 - 34447903
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| ||||||| ||||||    
T  34447958 aattagtgatgtggcagtgattaagtggggagagagacgaaa-tttaaattattaaa 34447903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 15848370 - 15848425
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  15848370 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 15848425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 34448077 - 34448132
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  34448077 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 34448132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 1696000 - 1696046
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||||    
T  1696000 cgtgacagtgattaagtggggagagggacgaaattttaaacgattaa 1696046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 651
Target Start/End: Complemental strand, 10840282 - 10840252
Alignment:
Q  621 agggagaaacctagagttgtatatgcaaaaa 651  Q
    |||||||||||||||||||||||||||||||    
T  10840282 agggagaaacctagagttgtatatgcaaaaa 10840252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 25624397 - 25624447
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||||  ||| |||||||||||| ||||||||||||| ||||    
T  25624397 gtggcagtgattaaccgggtagagggacgaaattttaaatgattaattttt 25624447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 25893498 - 25893556
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||| |||||||||||||||||| ||| ||||  |||||  ||||||||||||||    
T  25893498 ctaattagggacgtggcagtgattaaggggggagagaaacgaatttttaaatgattaaa 25893556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 44044262 - 44044205
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||| |||||||||||||| ||||| ||||   |||||||||| |||||||||||||    
T  44044262 ctaatcagtgacgtggcagtaattaattgggctcagggacgaaattttaaatgattaa 44044205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 45556247 - 45556202
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||| || |||||||| ||| ||||||||||||||    
T  45556247 tggcagtgattaagtagggagagggacaaaattttaaatgattaaa 45556202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 6573184 - 6573136
Alignment:
Q  285 acgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||| ||||||||||| ||| |||||||||||  ||||||||||||||    
T  6573184 acgtgacagtgattaaggggggagagggacgaatttttaaatgattaaa 6573136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 17266629 - 17266673
Alignment:
Q  294 tgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||||| |||  ||||||| |||||||||||||||||||    
T  17266629 tgattaagtggggagaatgacgaaattttaaatgattaaattttg 17266673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 22051140 - 22051088
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgat 329  Q
    |||||||||||||||||||||||||| ||   | |||||||| ||||||||||    
T  22051140 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgat 22051088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 22051276 - 22051331
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||  |||||||||||| |||||| ||| ||||||| ||||||||||||||    
T  22051276 aattagtgatatggcagtgattaggtggga-gagagacgaaattttaaatgattaaa 22051331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 32063472 - 32063575
Alignment:
Q  83 ttgttgggtttgatgctcagcaagaatgtttcatggaggttggttctggaagattatacgggaaagggagagagaaaaagagagattgcaatctgggttt 182  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    |||||||||  |||||||| |||||| ||||||||||||||| |||||||    
T  32063472 ttgttgtgtttgatgctcagcaagaatgtttcatggaggttggttc----agattatacatgaaagggaaagagaagaagagagattgcaatttgggttt 32063567  T
Q  183 tggagaag 190  Q
    ||||||||    
T  32063568 tggagaag 32063575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 405
Target Start/End: Original strand, 41583518 - 41583641
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattt 381  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| || |||||  ||  |||||||  ||||  || || ||| |||    
T  41583518 gtgacgtggcagtgattaagtgagaagagggacgaaattttaaatgattaacttttgcaggggcaatttgccaggattagcgaatacagaaatcaatttt 41583617  T
Q  382 taaatgacccctatttgcaaggat 405  Q
    ||||||||||||| ||||| ||||    
T  41583618 taaatgacccctaattgcagggat 41583641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 278 - 397
Target Start/End: Original strand, 52298269 - 52298388
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaa 377  Q
    ||||||||| ||  || |||||| |||| | ||| |||||| ||||||||||||||||||| |  | ||||||| |||||||||  |||| |||||||||    
T  52298269 attagtgacatgatagagattaaatggggataggaacgaaattttaaatgattaaattttgcatagacaaaatgctaggattaacaaattcaggaaccaa 52298368  T
Q  378 attttaaatgacccctattt 397  Q
    ||||||||||||||||||||    
T  52298369 attttaaatgacccctattt 52298388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 14801882 - 14801826
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14801882 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 14801826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 34765662 - 34765718
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  34765662 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 34765718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 405
Target Start/End: Complemental strand, 40387608 - 40387485
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattt 381  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||| || |||||  ||  |||||||  ||||  ||| ||||| |||    
T  40387608 gtgacgtggcagtgattaagtgagaagaggaacgaaattttaaatgattaacttttgcaggggcaatttgccaggattagcgaatacagggaccaatttt 40387509  T
Q  382 taaatgacccctatttgcaaggat 405  Q
    |||||| |||||| ||||| ||||    
T  40387508 taaatggcccctaattgcagggat 40387485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 7280387 - 7280477
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaat 366  Q
    |||||||||||||||||||||||||||||| |||| |||  || ||||| ||||||||||||||  ||||||||||| || ||||| ||||    
T  7280387 taattagtgacgtggcagtgattaagtggggagagagacataattttaagtgattaaattttgacatggcaaaatgtcagaattaaagaat 7280477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 52298169 - 52298111
Alignment:
Q  280 tagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  52298169 tagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaattttg 52298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 16605750 - 16605693
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  16605750 ctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaa 16605693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 48529856 - 48529921
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaa 340  Q
    ||||| ||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||    
T  48529856 ctaatcagtgacgtggcagtgattaagtggagagagggacaaaattttaaatgattaaattttgaa 48529921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 24411504 - 24411448
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  24411504 aattagtgacgtgggagtgattaagtgggaagagggacgaatctttaaatgattaaa 24411448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 35028280 - 35028336
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  35028280 aattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaaa 35028336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 393
Target Start/End: Complemental strand, 41582593 - 41582477
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    |||||||||||||||| ||||||| || || ||||||||||| ||||||||||||| ||||| || |||||  ||  |||||||| || |  ||| ||||    
T  41582593 aattagtgacgtggcaatgattaactgtgatgagggacgaaattttaaatgattaacttttgcaggggcaatttgccaggattaacgattagagggacca 41582494  T
Q  377 aattttaaatgacccct 393  Q
    | |||||||||||||||    
T  41582493 atttttaaatgacccct 41582477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 53701958 - 53701902
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  53701958 aattagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaaa 53701902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 24349819 - 24349765
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  24349819 attagtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaa 24349765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 409
Target Start/End: Complemental strand, 11858039 - 11857906
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||||||||||||| |||||||||||||| | ||||||| ||  ||||| |||||||||||||     ||||||||  |||||||| ||||  ||| |||    
T  11858039 taattagtgacgtgacagtgattaagtggaatgagggaccaatttttaagtgattaaattttggcagagcaaaatgccaggattaaggaatacagggacc 11857940  T
Q  376 aaattttaaatgacccctatttgcaaggattaaa 409  Q
    |  |||||||||||| ||||||||| ||| ||||    
T  11857939 attttttaaatgacctctatttgcagggactaaa 11857906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 23455649 - 23455726
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||||||  |||||||||||||||| || |||||||||| ||||  ||||||||||||  |||||||    
T  23455649 tgacgtggcagtgattaatcgggaagagggacgaaatttgaaatgattaatttttacagtggcaaaatgggaggatta 23455726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 15507955 - 15508011
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||    
T  15507955 aattagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaaa 15508011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 17356204 - 17356256
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgat 329  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  17356204 aattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgat 17356256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 37976435 - 37976491
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||    
T  37976435 aattagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaa 37976491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 43155787 - 43155835
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  43155787 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaat 43155835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 52909399 - 52909343
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||    
T  52909399 aattagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaa 52909343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 13058174 - 13058127
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  13058174 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 13058127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 23613446 - 23613399
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  23613446 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 23613399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 36009104 - 36009151
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  36009104 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 36009151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 49879467 - 49879514
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  49879467 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 49879514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 4982986 - 4983032
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  4982986 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 4983032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 9145026 - 9145072
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  9145026 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 27934669 - 27934623
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  27934669 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 42738291 - 42738337
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  42738291 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 44967330 - 44967376
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  44967330 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 44967376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 55867402 - 55867452
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  55867402 tgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaa 55867452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 53129788 - 53129836
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaa 325  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||||    
T  53129788 aattagtgatgtggcagtgattaagtggggagagggacgaaattttaaa 53129836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 5369084 - 5369037
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  5369084 cgtggcagtgattaagtggggagagggacaaaattttaaatgattaaa 5369037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 18831486 - 18831439
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  18831486 cgtggcagtgattaagtggggagagagacgaaattttaaatgattaaa 18831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 24711248 - 24711201
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  24711248 cgtggtagtgattaagtggggagagggacgaaattttaaatgattaaa 24711201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 48528620 - 48528557
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||| ||||| ||| ||||||||||||||| | ||| |||||| |||||||||||||||||||    
T  48528620 ctaatcagtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaattttg 48528557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 50418928 - 50418975
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  50418928 cgtgacagtgattaagtggggagagggacgaaattttaaatgattaaa 50418975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 56014867 - 56014816
Alignment:
Q  281 agtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| || || ||||||||||| |||||||||||||    
T  56014867 agtgacgtggcagtgattaactgtgatgagggacgaaattttaaatgattaa 56014816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 9400779 - 9400825
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||    
T  9400779 cgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 9400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 10781767 - 10781821
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||| ||||| |||| |||| |||||||||||| |||||||||||||    
T  10781767 attagtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaa 10781821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 22566936 - 22566890
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||    
T  22566936 cgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 22566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 32950279 - 32950233
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||    
T  32950279 cgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 33247533 - 33247579
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||    
T  33247533 cgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 33247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 34837334 - 34837380
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  34837334 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 34837380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 54434334 - 54434280
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||||||| ||||| || ||||| || |||||||||||||    
T  54434334 attagtgacgtggcagtgattaactgggatgaaggacgtaattttaaatgattaa 54434280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 30642428 - 30642489
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||| |||||||||||| ||||||||||   |||||||||| |||||||||||||| ||||    
T  30642428 aattaatgacgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaaactttg 30642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 40388388 - 40388449
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||||||||| ||||||| || ||  |||||||||| ||||||||||||| |||||    
T  40388388 aattagtgacgtggcaatgattaactgtgatcagggacgaaattttaaatgattaacttttg 40388449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 35508522 - 35508578
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||| |||| |||||||||||||||||| ||||  |||||| ||||||||||||||    
T  35508522 aattaatgacatggcagtgattaagtggggagagatacgaaattttaaatgattaaa 35508578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 37248370 - 37248326
Alignment:
Q  289 ggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||    
T  37248370 ggcagtgattaagtggggagagcgacgaaattttaaatgattaaa 37248326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 54086977 - 54087033
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| ||  |||||||||||||| |||| ||||||| ||||||||||||||    
T  54086977 aattagtgacatgttagtgattaagtggggagagagacgaaattttaaatgattaaa 54087033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 331
Target Start/End: Original strand, 54435377 - 54435433
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgatta 331  Q
    ||||||||||| |||  |||||||||| |||||||||||||||| ||||||| ||||    
T  54435377 ctaattagtgatgtgttagtgattaagggggaagagggacgaaattttaaataatta 54435433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 8439506 - 8439561
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||| ||||||||| |||||||||||||   |||||||||| |||||||||||||    
T  8439506 aattactgacgtggcggtgattaagtgggtcaagggacgaaattttaaatgattaa 8439561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 46661196 - 46661251
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  46661196 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 46661251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 56015933 - 56015984
Alignment:
Q  281 agtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| || || || |||||||| |||||||||||||    
T  56015933 agtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaa 56015984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 333
Target Start/End: Complemental strand, 16005970 - 16005928
Alignment:
Q  291 cagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||| || |||||||||||| ||||||||||||||    
T  16005970 cagtgattaagtagggagagggacgaaattttaaatgattaaa 16005928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 38012307 - 38012261
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||| ||||||| |||||| ||||||    
T  38012307 cgtggcagtgattaagtggggagagagacgaaattttaaacgattaa 38012261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 409
Target Start/End: Complemental strand, 7280312 - 7280223
Alignment:
Q  320 tttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccctatttgcaaggattaaa 409  Q
    ||||| ||||||||||||||   |||||||||  |||||||| ||||  ||  ||||  ||||||||||||||||||| |||||| ||||    
T  7280312 tttaagtgattaaattttgacagggcaaaatgacaggattaaagaatacagagaccattttttaaatgacccctatttacaaggactaaa 7280223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 81 - 190
Target Start/End: Complemental strand, 6956543 - 6956438
Alignment:
Q  81 ggttgttgggtttgatgctcagcaagaatgtttcatggaggttggttctggaagattatacgggaaagggagagagaaaaagagagattgcaatctgggt 180  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    |||||||||  |||||||| |||||| ||||||||||||||| |||||    
T  6956543 ggttgttgtgtttgatgctcagcaagagtgtttcatggaggttggttc----agattatacatgaaagggaaagagaagaagagagattgcaatatgggt 6956448  T
Q  181 tttggagaag 190  Q
    ||||||||||    
T  6956447 tttggagaag 6956438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 14634044 - 14634166
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaat 386  Q
    ||||||||||||||||||| ||| |||||||||||| | |||||||||||||    |||||||||    |||||| ||||  ||| ||||| ||||||||    
T  14634044 gtggcagtgattaagtggggagaaggacgaaagttttagtgattaaattttggcagggcaaaatgcctcgattaaggaatacagggaccaatttttaaat 14634143  T
Q  387 gacccctatttgcaaggattaaa 409  Q
    |||||||||||||||||| ||||    
T  14634144 gacccctatttgcaaggactaaa 14634166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 30380993 - 30380908
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaa 361  Q
    |||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||||  || |||||| | ||||||||    
T  30380993 taattagtgacgtggcagtgatcaagtggacagagggacgaaattttaaatgattaaattttgacatgacaaaatatcaggattaa 30380908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 33689661 - 33689718
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  33689661 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaat 33689718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 20704608 - 20704670
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||||    
T  20704608 taattagtgacgtgactgtgattaagtgggaagagggacgaaattttaagtgattaaattttg 20704670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 33156274 - 33156332
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  33156274 ctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaaa 33156332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 281 - 409
Target Start/End: Complemental strand, 20704572 - 20704444
Alignment:
Q  281 agtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaatt 380  Q
    |||||| ||| |||||||||||||| ||||||||| || ||||| |||||||||||||    |||||||||| | |||||| ||||  ||||||||  ||    
T  20704572 agtgacatggtagtgattaagtggggagagggacggaattttaagtgattaaattttggcagggcaaaatgtcaagattaaggaatataggaaccatttt 20704473  T
Q  381 ttaaatgacccctatttgcaaggattaaa 409  Q
    ||||||||| | |||||||| ||| ||||    
T  20704472 ttaaatgactcttatttgcagggactaaa 20704444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 23458261 - 23458317
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  23458261 aattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 23458317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 26463880 - 26463936
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  26463880 aattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaa 26463936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 40758290 - 40758234
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  40758290 aattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaa 40758234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 9367887 - 9367832
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  9367887 aattagtgacgtggcagtgattaattgggatgagggacgaaattttaaatgattaa 9367832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 51994173 - 51994224
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 51994224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 32717065 - 32717142
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||  || |||||||||  |||||||    
T  32717065 tgacgtggcagtaattaattgggaagagggacgaaattttaaatgattaatttttacaggggcaaaatggaaggatta 32717142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 41988108 - 41988047
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||| ||||||||||||||||| | |||| ||||||| |||||||||||||||||||    
T  41988108 aattagtgatgtggcagtgattaagtgaggagagagacgaaattttaaatgattaaattttg 41988047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 9294240 - 9294296
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  9294240 aattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaa 9294296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 39399375 - 39399435
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||||||||||||||| |||| |||| || |||| |||||||||||||||||||    
T  39399375 attagtgacgtggcagtgattaactggggagagagatgaaattttaaatgattaaattttg 39399435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 54317914 - 54317974
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||||||||||||||| | || |||| ||||||| |||||||||||||||||||    
T  54317914 attagtgacgtggcagtgattaattagggagagagacgaaattttaaatgattaaattttg 54317974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 2796316 - 2796269
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  2796316 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 2796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 8041753 - 8041707
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  8041753 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 10770751 - 10770797
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  10770751 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 10770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 29192175 - 29192121
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||    
T  29192175 tgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaattttt 29192121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 36314558 - 36314604
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  36314558 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 48322637 - 48322683
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  48322637 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 48322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 54466560 - 54466514
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  54466560 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 54466514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 405
Target Start/End: Original strand, 40506069 - 40506198
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    ||||||| || || ||||||||||||| | |||| ||||||| |||||||||||||||  || |  || ||| ||| |||||||| || |  ||||||||    
T  40506069 aattagttacatgacagtgattaagtgcggagagagacgaaattttaaatgattaaataatgtaagggtaaattgtcaggattaacgattacaggaacca 40506168  T
Q  377 aattttaaatgacccc-tatttgcaaggat 405  Q
    | |||||||||||||| || ||||||||||    
T  40506169 acttttaaatgaccccataattgcaaggat 40506198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 43384429 - 43384373
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||| |||| ||||||| ||||||||||||||    
T  43384429 aattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaaa 43384373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 44654790 - 44654846
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||| |||||||||| |||| |||||||||||| ||||| |||||||||||||    
T  44654790 gtgacgtgacagtgattaaatggggagagggacgaaattttaagtgattaaattttg 44654846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 19741183 - 19741230
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  19741183 cgtggcagtgattaagtggggagagtgacgaaattttaaatgattaaa 19741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 405
Target Start/End: Complemental strand, 25107353 - 25107231
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaatttt 382  Q
    |||||||||||||||||| || || ||||||||||| |||||||||||||  |||| || |||||  ||  |||||||  || |  ||  ||||| ||||    
T  25107353 tgacgtggcagtgattaactgtgatgagggacgaaattttaaatgattaacatttgcaggggcaatttgccaggattagcgattagagagaccaattttt 25107254  T
Q  383 aaatgacccctatttgcaaggat 405  Q
    |||||||||||| ||||| ||||    
T  25107253 aaatgacccctaattgcagggat 25107231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 42854579 - 42854520
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||| ||| ||||||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  42854579 aattactgaggtggcagtgattaagtgg--agagagacgaaattttaaatgattaaattttg 42854520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 21783783 - 21783899
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaat-taaggaaccaaattt 381  Q
    ||||||| |||||||||| ||||  |||| |||||| ||||||||||||||||||| || |  ||||||  |||||||| |||| ||||| || || |||    
T  21783783 tgacgtgacagtgattaattgggctgaggaacgaaattttaaatgattaaattttgcagggataaaatgcaaggattaacgaatataagg-actaatttt 21783881  T
Q  382 taaatgacccctatttgc 399  Q
    |||| |||||||| ||||    
T  21783882 taaacgacccctaattgc 21783899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 25108375 - 25108432
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||| |||||||||||||||||||| || || || |||||||| |||||||||||||    
T  25108375 ctaatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaa 25108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 46474950 - 46474905
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||    
T  46474950 tggcagtgattaagtggggagagggacaaaattttaaatgattaaa 46474905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 53756890 - 53756834
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || || ||||||| |||||||| |||||||| ||||||||||||||    
T  53756890 aattagtgacatgacaatgattaaatgggaagatggacgaaattttaaatgattaaa 53756834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 2944053 - 2943986
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaat 350  Q
    ||||||||||||||||||  |||||||||||||||  || |||||||||| ||||  || ||||||||    
T  2944053 tgacgtggcagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaat 2943986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 4521762 - 4521825
Alignment:
Q  276 taattagtgacgtggcagtgattaagtggga-agagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||  |||| |||||||||||||  |||||||||||| ||||| |||||||||||||    
T  4521762 taattagtgatctggcggtgattaagtgggggagagggacgaaattttaagtgattaaattttg 4521825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 23458125 - 23458070
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  23458125 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 23458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 46475063 - 46475118
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  46475063 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 46475118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 55052539 - 55052586
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||| ||||||||| |||| |||||||||||| ||||||||||||||    
T  55052539 cgtggtagtgattaaatggggagagggacgaaattttaaatgattaaa 55052586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 21185978 - 21186032
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||| ||||||||| |||||||||||||   |||||||||| |||||||||||||    
T  21185978 attactgacgtggcggtgattaagtgggtcaagggacgaaattttaaatgattaa 21186032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 32716389 - 32716335
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||||||||   ||||||||||||||| |||||||| |||| ||||    
T  32716389 tgacgtggcagtgattaatctggaagagggacgaaattttaaatggttaattttt 32716335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 40033752 - 40033794
Alignment:
Q  291 cagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||    
T  40033752 cagtgattaagtggggagagggacaaaattttaaatgattaaa 40033794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 43608646 - 43608684
Alignment:
Q  81 ggttgttgggtttgatgctcagcaagaatgtttcatgga 119  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  43608646 ggttgttgtgtttgatgctcagcaagagtgtttcatgga 43608684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 5e-27; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 277 - 407
Target Start/End: Original strand, 27999133 - 27999262
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    ||||||||| |||||||||||||||||||||||| ||||||| || |||||||||||||||| |||||||||||  |   ||||| |||||  |||||||    
T  27999133 aattagtgaggtggcagtgattaagtgggaagagagacgaaatttaaaatgattaaattttgtagtggcaaaatact-ttattaacgaatttgggaacca 27999231  T
Q  377 aattttaaatgacccctatttgcaaggatta 407  Q
    |||||||||| | ||||||||||| ||||||    
T  27999232 aattttaaataagccctatttgcagggatta 27999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 276 - 409
Target Start/End: Complemental strand, 42267450 - 42267317
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    ||||||||||||||| |||||||||||||| |||| |||||||  ||||||||||||||||||    | |||| ||| |||||||| ||||  ||| |||    
T  42267450 taattagtgacgtggtagtgattaagtggggagagagacgaaatattaaatgattaaattttggcaggacaaattgtcaggattaaagaatacagggacc 42267351  T
Q  376 aaattttaaatgacccctatttgcaaggattaaa 409  Q
    || |||||||||||||||||||||| ||| ||||    
T  42267350 aatttttaaatgacccctatttgcagggaataaa 42267317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 277 - 405
Target Start/End: Original strand, 17662132 - 17662260
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   || |  || ||| ||  |||||||| || | |||||||||    
T  17662132 aattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattaaaggaacca 17662231  T
Q  377 aattttaaatgacccctatttgcaaggat 405  Q
    | ||||||| |||||| | ||||||||||    
T  17662232 atttttaaacgaccccaaattgcaaggat 17662260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 275 - 409
Target Start/End: Original strand, 34850345 - 34850479
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaac 374  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| |  || ||  ||  |||||||  ||||  ||| ||    
T  34850345 ctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacagggac 34850444  T
Q  375 caaattttaaatgacccctatttgcaaggattaaa 409  Q
    ||| ||||||| |||||||| ||||||||||||||    
T  34850445 caatttttaaacgacccctaattgcaaggattaaa 34850479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 4960686 - 4960630
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4960686 aattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaa 4960630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 34849152 - 34849025
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattt 381  Q
    |||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| |  || ||  ||  |||||||  ||||  ||| ||||| |||    
T  34849152 gtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacagggaccaatttt 34849053  T
Q  382 taaatgacccctatttgcaaggattaaa 409  Q
    |||| |||||||| ||||||||||||||    
T  34849052 taaaagacccctaattgcaaggattaaa 34849025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 276 - 397
Target Start/End: Original strand, 22103787 - 22103908
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||| ||||||||||||||   ||||||||   ||||||||  |||  | | |||    
T  22103787 taattagtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaattttgacagggcaaaatagcaggattaaaaaatacatggacc 22103886  T
Q  376 aaattttaaatgacccctattt 397  Q
    |  |||||||||||||||||||    
T  22103887 attttttaaatgacccctattt 22103908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 6367708 - 6367652
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6367708 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 6367652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 21444741 - 21444678
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttga 339  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||    
T  21444741 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaattttga 21444678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 25648021 - 25647902
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaa 385  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||  || || || ||| ||  |||||||| || |  ||| ||||| |||||||    
T  25648021 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaggggtaaattgccaggattaacgattacagggaccaatttttaaa 25647922  T
Q  386 tgacccctatttgcaaggat 405  Q
     |||||||| ||||||||||    
T  25647921 cgacccctaattgcaaggat 25647902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 40210654 - 40210708
Alignment:
Q  279 ttagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  40210654 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 40210708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 276 - 409
Target Start/End: Complemental strand, 13245997 - 13245864
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||||||||||||| ||||||||||||||| |||||||| ||| ||||| |||||||||||||    || ||||||  |||||||| ||||  | | |||    
T  13245997 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaattttggcagggtaaaatgccaggattaaggaatacaaggacc 13245898  T
Q  376 aaattttaaatgacccctatttgcaaggattaaa 409  Q
    || ||||||||||  |||||||||| ||| ||||    
T  13245897 aatttttaaatgaatcctatttgcagggactaaa 13245864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 13914349 - 13914405
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  13914349 aattagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaaa 13914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 349
Target Start/End: Original strand, 16970817 - 16970889
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaa 349  Q
    ||||| |||| ||||| |||||||||||| |||||||||||| ||||||||||||||||||  ||||||||||    
T  16970817 aattactgacatggcaatgattaagtggggagagggacgaaattttaaatgattaaattttacagtggcaaaa 16970889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 24009823 - 24009879
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  24009823 aattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 24009879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 42248619 - 42248563
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  42248619 aattagtcacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 42248563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 10304059 - 10304008
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  10304059 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaattttg 10304008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 37578474 - 37578529
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  37578474 aattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 37578529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 409
Target Start/End: Complemental strand, 9443715 - 9443586
Alignment:
Q  280 tagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaat 379  Q
    ||||||| || || ||||||||||||  ||||||| ||| |||||||||||||||||||    | |||||||  |||||||| ||||  ||  ||||  |    
T  9443715 tagtgacttgacaatgattaagtggggggagggaccaaattttaaatgattaaattttgggaggacaaaatgccaggattaaggaatacagagaccattt 9443616  T
Q  380 tttaaatgacccctatttgcaaggattaaa 409  Q
    ||||||||||||||||||||||||| ||||    
T  9443615 tttaaatgacccctatttgcaaggactaaa 9443586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 19017911 - 19017968
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    ||||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||    
T  19017911 aattagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaaat 19017968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 183482 - 183530
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  183482 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaat 183530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 1103607 - 1103551
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  1103607 aattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaa 1103551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 1841605 - 1841549
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||    
T  1841605 aattagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaa 1841549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 14879117 - 14879061
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  14879117 aattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaa 14879061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 30711473 - 30711417
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||    
T  30711473 aattagtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaaa 30711417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 32917406 - 32917350
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  32917406 aattagtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaaa 32917350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 34464731 - 34464787
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||    
T  34464731 aattagtgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaa 34464787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 43758968 - 43758912
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||    
T  43758968 aattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaa 43758912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 10304147 - 10304198
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  10304147 gtggcagtgattaagtggggagagagacgaaattttaaatgattaaattttg 10304198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 24905427 - 24905473
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  24905427 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 28011500 - 28011454
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  28011500 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 28011454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 31514577 - 31514623
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  31514577 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 31514623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 33442854 - 33442900
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  33442854 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 35152489 - 35152433
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| | |||||||||||||||| |||||||| ||| ||||||||||||||    
T  35152489 aattagtgacattgcagtgattaagtggggagagggacaaaattttaaatgattaaa 35152433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 285 - 405
Target Start/End: Complemental strand, 40435483 - 40435363
Alignment:
Q  285 acgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaa 384  Q
    |||||||||||||||| ||||  ||| |||| || ||||||||||||||||||  ||  ||||||||  |||||||| ||||  |   ||||| ||||||    
T  40435483 acgtggcagtgattaattgggctgagagacggaattttaaatgattaaattttacaggtgcaaaatgcaaggattaacgaatacaatgaccaatttttaa 40435384  T
Q  385 atgacccctatttgcaaggat 405  Q
    | |||||||| ||||||||||    
T  40435383 acgacccctaattgcaaggat 40435363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 47999383 - 47999431
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||    
T  47999383 cgtggcagtgattaagtggggagagggacgatattttaaatgattaaat 47999431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 26024560 - 26024513
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  26024560 cgtggcagtgattaagtggggagagggacgaacttttaaatgattaaa 26024513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 4716728 - 4716774
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||    
T  4716728 cgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 4716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 13295275 - 13295221
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||||||||  |||||||||||||| | ||||||||||||| ||||    
T  13295275 tgacgtggcagtgattaaccgggaagagggacgacattttaaatgattaattttt 13295221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 25065077 - 25065019
Alignment:
Q  279 ttagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||||||||| ||||| | ||||||||||||  |||||||||||| ||||    
T  25065077 ttagtgacgtggcagtgatcaagtgaggagagggacgaaatcttaaatgattaattttt 25065019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 25065910 - 25065972
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| ||||    
T  25065910 ctaatcagtgaggtggcagtgattaagtggagagagggacgaaatcttaaatgattaattttt 25065972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 44523416 - 44523474
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||||||||||    |||||| |||| ||||||||||||||    
T  44523416 ctaattagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaaa 44523474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 52134205 - 52134159
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  52134205 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 52134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 19515954 - 19515909
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  19515954 tggcagtgattaagtggggagagggacgaaattttaaataattaaa 19515909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 397
Target Start/End: Complemental strand, 32927405 - 32927284
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||| ||||| |||||||| ||||| |||    |||||| ||| ||||| ||||||||||||| || | |||||||| ||||||||| |||| | | ||     
T  32927405 taatcagtgatgtggcagtcattaaatggatttagggaccaaattttaactgattaaattttgtagcgacaaaatgtcaggattaataaattcaaggact 32927306  T
Q  376 aaattttaaatgacccctattt 397  Q
    || ||||||||||||| |||||    
T  32927305 aatttttaaatgacccatattt 32927284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 36694541 - 36694586
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||    
T  36694541 tggcagtgattaagtggggagagagacgaaattttaaatgattaaa 36694586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 36710642 - 36710687
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||    
T  36710642 tggcagtgattaagtggggagagagacgaaattttaaatgattaaa 36710687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 40772642 - 40772597
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||    
T  40772642 tggcggtgattaagtggggagagggacgaaattttaaatgattaaa 40772597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 41098879 - 41098823
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| |||| |||||||||||||| || ||||| ||| ||||||||||||||    
T  41098879 aattagtgatgtggtagtgattaagtggggagggggacaaaattttaaatgattaaa 41098823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 46163176 - 46163120
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || |||| |||||||||| |||| ||||||| ||||||||||||||    
T  46163176 aattagtgacatgacagtaattaagtggggagagagacgaaattttaaatgattaaa 46163120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 48691290 - 48691242
Alignment:
Q  281 agtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgat 329  Q
    ||||||||||||||||||||||||| |||| ||| ||| ||||||||||    
T  48691290 agtgacgtggcagtgattaagtggggagagtgacaaaattttaaatgat 48691242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 48779263 - 48779207
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| ||||| | | || ||||||||||||||    
T  48779263 aattagtgacatggcagtgattaagtggggagaggaaaggaattttaaatgattaaa 48779207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 1841741 - 1841796
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  1841741 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 1841796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 6367844 - 6367899
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  6367844 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 6367899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 14879253 - 14879308
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  14879253 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 14879308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 31197207 - 31197152
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgatta 331  Q
    |||| |||||||||||||||||||| | ||| |||||| |||| ||||||||||||    
T  31197207 taatcagtgacgtggcagtgattaactaggatgagggatgaaattttaaatgatta 31197152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 48779401 - 48779456
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  48779401 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 48779456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 19227109 - 19227047
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||| |||||||||  ||||| ||||| || |||||||||||| ||||| |||||||||||||    
T  19227109 taataagtgacgtgatagtgaataagttgggagagggacgaaattttaagtgattaaattttg 19227047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 23209620 - 23209662
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgatt 330  Q
    |||||||||||||||||| |||||||||||| | |||||||||    
T  23209620 tggcagtgattaagtggggagagggacgaaattgtaaatgatt 23209662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 42534303 - 42534352
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||| |||||||| ||||| | ||||||||| |||||||||||||    
T  42534303 tgacgtggccgtgattaactgggatgtgggacgaaattttaaatgattaa 42534352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 7821100 - 7821044
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||| || ||   | |||||||| ||||||||||||||    
T  7821100 aattagtgacgtggcagtgattacgttggtcaaaggacgaaattttaaatgattaaa 7821044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 409
Target Start/End: Original strand, 32928140 - 32928228
Alignment:
Q  321 ttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccctatttgcaaggattaaa 409  Q
    |||||| ||||||||||| |||||| |||||  || |||||  |||| | | ||||| | |||||||||||||||||||| ||| ||||    
T  32928140 ttaaataattaaattttgcagtggcgaaatgccagaattaacaaattcatggaccaattcttaaatgacccctatttgcacggactaaa 32928228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 34464595 - 34464539
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||||||| ||   |  ||||||| ||||||||||||||    
T  34464595 aattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaa 34464539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 5e-24; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 276 - 409
Target Start/End: Original strand, 1215147 - 1215280
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||   ||||||||| |||| |||| ||||  | ||| |    
T  1215147 taattagtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaattttgacagggcaaaatggtaggcttaaggaatacatgaatc 1215246  T
Q  376 aaattttaaatgacccctatttgcaaggattaaa 409  Q
    |  |||||||||| ||||||||||| ||| ||||    
T  1215247 attttttaaatgagccctatttgcagggagtaaa 1215280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 276 - 405
Target Start/End: Complemental strand, 26463326 - 26463197
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||| |  || ||  ||  |||||||| ||||  ||| |||    
T  26463326 taatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaactttgcaagggtaatttgccaggattaacgaatacagggacc 26463227  T
Q  376 aaattttaaatgacccctatttgcaaggat 405  Q
    || ||||||| |||||||| ||||| ||||    
T  26463226 aatttttaaacgacccctaattgcagggat 26463197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 12080782 - 12080726
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  12080782 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaa 12080726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 21627995 - 21628051
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  21627995 aattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaaa 21628051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 33517680 - 33517624
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  33517680 aattagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaaa 33517624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 278 - 409
Target Start/End: Complemental strand, 10782553 - 10782423
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaa 377  Q
    ||||||||| ||| || | |||||||||| ||| ||||||| ||||||||||||||||||| ||   |||||| |||||||||   |||| |  ||||||    
T  10782553 attagtgacatggtagagtttaagtggga-gagagacgaaattttaaatgattaaattttgcaggaacaaaatattaggattagcaaattcattaaccaa 10782455  T
Q  378 attttaaatgacccctatttgcaaggattaaa 409  Q
    |||||||||||||| |||||||| ||| ||||    
T  10782454 attttaaatgacccatatttgcagggactaaa 10782423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 33647109 - 33647052
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    |||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||||    
T  33647109 aattagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaaat 33647052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 30725905 - 30725849
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| ||||||||||||| |||| |||||||||||| ||||||||||||||    
T  30725905 aattagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaaa 30725849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 30804007 - 30803951
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||  |||||||||||||||||| |||||||||||| ||||||||||||||    
T  30804007 aattagtgagatggcagtgattaagtggggagagggacgaaattttaaatgattaaa 30803951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 3059402 - 3059347
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||    
T  3059402 attagtgacatggcagtgattaagtgaggagagggacgaaattttaaatgattaaa 3059347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 28000645 - 28000691
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  28000645 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 28000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 30337586 - 30337540
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  30337586 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 30337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 17734454 - 17734501
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  17734454 cgtggcagtgattaagtggggagagggacaaaattttaaatgattaaa 17734501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 33648746 - 33648809
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttga 339  Q
    |||||||||| |||||||| |||||||| | ||||||| |||| ||||| ||||||||||||||    
T  33648746 taattagtgatgtggcagtaattaagtgaggagagggaagaaattttaagtgattaaattttga 33648809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 363090 - 363136
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  363090 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 14196875 - 14196921
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||    
T  14196875 cgtggcagtgattaagtggggagaggggcgaaattttaaatgattaa 14196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 24210677 - 24210616
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||||||||||||| ||||||| | ||| ||||||| |||| |||||||||||||| ||||    
T  24210677 aattagtgacgtggcggtgattaggcggggagagggatgaaattttaaatgattaaactttg 24210616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 11392984 - 11392928
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| ||||||||||||||| || |||  ||||||| ||||||||||||||    
T  11392984 aattagtgacatggcagtgattaagttgggagatagacgaaattttaaatgattaaa 11392928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 34535640 - 34535591
Alignment:
Q  7 tgagatgaatactgaaaacacagttatcactttgaagatgcaaggacaaata 58  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| |||||||    
T  34535640 tgagaggaatactgaaaaca--gttatcactttgaagatgcaagcacaaata 34535591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 11434948 - 11434893
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||| ||||   | |||||||| |||||||||||||    
T  11434948 aattagtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaa 11434893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 21627859 - 21627804
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  21627859 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 21627804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 25486188 - 25486232
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  25486188 cgtggcagtgattaagtggg--gagggacgaaattttaaatgattaa 25486232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 28498305 - 28498368
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||| |||||||||||||||||||| ||||   |||||| ||| |||||||||||||| ||||    
T  28498305 ctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaaactttg 28498368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 29810716 - 29810779
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||| |||||||||||||||||||| ||||   |||||| ||| |||||||||||||| ||||    
T  29810716 ctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaaactttg 29810779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 30726041 - 30726096
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  30726041 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 30726096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 30804143 - 30804198
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  30804143 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 30804198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 33517816 - 33517871
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  33517816 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 33517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 11435957 - 11436006
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||| ||||||||||||   |||||||||| |||||||||||||    
T  11435957 tgacgtggcaatgattaagtgggtcaagggacgaaattttaaatgattaa 11436006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 277 - 405
Target Start/End: Complemental strand, 69111 - 68983
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||   || |  || ||| ||  ||||||| ||| |  ||| ||||    
T  69111 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagtgattacagggacca 69012  T
Q  377 aattttaaatgacccctatttgcaaggat 405  Q
    | |||||||||||||||| ||||||||||    
T  69011 atttttaaatgacccctaattgcaaggat 68983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 276 - 409
Target Start/End: Original strand, 22890275 - 22890408
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacc 375  Q
    |||||||||| ||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||    || ||||||| | |||||| ||||  ||| |||    
T  22890275 taattagtgatgtgacagtgattaagtgggaagagggacaaaattttaagtgattagattttgccagggaaaaatgtcaagattaaggaatacaggtacc 22890374  T
Q  376 aaattttaaatgacccctatttgcaaggattaaa 409  Q
    |  |||||||||||||||||||||| ||| ||||    
T  22890375 atgttttaaatgacccctatttgcagggactaaa 22890408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 4405942 - 4405998
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  4405942 aattagtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaaa 4405998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 16388808 - 16388864
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  16388808 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 16388864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 36928622 - 36928566
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  36928622 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 36928566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 31608795 - 31608849
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgatta 331  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  31608795 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgatta 31608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 13186206 - 13186150
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  13186206 aattagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaa 13186150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 409
Target Start/End: Original strand, 31873181 - 31873313
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    ||||||||| || |||||||||||||||||||||| || ||| |||||||||||||||||||    |||||| ||  | |||||| |||| || | ||||    
T  31873181 aattagtgatgtagcagtgattaagtgggaagaggaacaaaattttaaatgattaaattttgggagggcaaattgccaagattaacgaataaaaggacca 31873280  T
Q  377 aattttaaatgacccctatttgcaaggattaaa 409  Q
      ||||||||||||| |||||||| ||| ||||    
T  31873281 ttttttaaatgacccatatttgcagggactaaa 31873313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 35756728 - 35756672
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  35756728 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaa 35756672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 39071822 - 39071766
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  39071822 aattagtgacgcggcagtgattaagtggggagagggacgaaattttaaatgattaaa 39071766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 12273147 - 12273191
Alignment:
Q  289 ggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  12273147 ggcagtgattaagtgggaagagggacgaaattttaaatgattaaa 12273191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 1425313 - 1425360
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  1425313 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 1425360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 23663805 - 23663852
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  23663805 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 23663852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 3041716 - 3041762
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  3041716 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 24085921 - 24085859
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||||||| ||||||||||||||| |||||||| ||| |||||  ||||||||||||    
T  24085921 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagcgattaaattttg 24085859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 36325371 - 36325325
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  36325371 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 38845559 - 38845605
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  38845559 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 38862754 - 38862708
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  38862754 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 38862708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 40775910 - 40775956
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  40775910 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 44407117 - 44407163
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  44407117 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 276 - 397
Target Start/End: Complemental strand, 20050234 - 20050109
Alignment:
Q  276 taattagtgacgtggcagtgattaagtg----ggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaagg 371  Q
    |||||| ||||||||| |||||||||||    || |||||||||||| ||||| |||||||||||||    |||||||||  || ||||| ||||  | |    
T  20050234 taattaatgacgtggctgtgattaagtgtggagggagagggacgaaattttaagtgattaaattttggcagggcaaaatgccagaattaaggaatacatg 20050135  T
Q  372 aaccaaattttaaatgacccctattt 397  Q
     ||||| |||||||||||||||||||    
T  20050134 gaccaatttttaaatgacccctattt 20050109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 36186349 - 36186405
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||| | |||||||||||||||| || |||||||||||| ||||||||||||||    
T  36186349 aattagtaatgtggcagtgattaagtagggagagggacgaaattttaaatgattaaa 36186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 40318246 - 40318302
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||| | ||| |||||||| ||||||||||||||    
T  40318246 aattagtgacatggcagtgattaagtgaggagaaggacgaaattttaaatgattaaa 40318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 8316879 - 8316926
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  8316879 cgtggcagtgattaagtggggagatggacgaaattttaaatgattaaa 8316926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 22915649 - 22915696
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||    
T  22915649 cgtggcagtgattaagtggggagagggacggaattttaaatgattaaa 22915696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 23698535 - 23698582
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  23698535 cgtgacagtgattaagtggggagagggacgaaattttaaatgattaaa 23698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 2266629 - 2266583
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  2266629 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 2266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 2534831 - 2534785
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||    
T  2534831 gtggcagtgattaactgggaatagggacgaaattttaaatgattaaa 2534785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 11674831 - 11674786
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  11674831 cgtggcagtgattaagtggga-gagggacgaaattttaaatgattaa 11674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 409
Target Start/End: Original strand, 9499883 - 9500011
Alignment:
Q  280 tagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaat 379  Q
    |||||||||| |||||||||||||||  ||||||  ||| |||||||||||||||||||    || ||||||| ||||||||  |||  | ||||||  |    
T  9499883 tagtgacgtgacagtgattaagtggg-ggagggatcaaattttaaatgattaaattttgggagggtaaaatgtcaggattaagaaatacatgaaccattt 9499981  T
Q  380 tttaaatgacccctatttgcaaggattaaa 409  Q
    |||||  |||||||||||| ||||| ||||    
T  9499982 tttaatcgacccctatttgtaaggactaaa 9500011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 12199211 - 12199256
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||    
T  12199211 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 12199256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 12443639 - 12443684
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||    
T  12443639 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 12443684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 35449871 - 35449915
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||    
T  35449871 tggcagtgattaaatggggagagggacgaaattttaaatgattaa 35449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 8747546 - 8747601
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||| ||||||||| |||||||||||||   |||||||||| |||||||||||||    
T  8747546 aattactgacgtggcggtgattaagtgggttaagggacgaaattttaaatgattaa 8747601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 11291192 - 11291255
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttga 339  Q
    |||||||||| ||||||||||||||||| | ||||  || ||| ||||| ||||||||||||||    
T  11291192 taattagtgatgtggcagtgattaagtgaggagagatacaaaattttaagtgattaaattttga 11291255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 23663691 - 23663636
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  23663691 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 23663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 34213904 - 34213837
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaat 350  Q
    ||||||||||||||||||  |||||||||||||||  || |||||||||| ||||  || ||||||||    
T  34213904 tgacgtggcagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaat 34213837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 36928758 - 36928813
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  36928758 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 36928813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 2693802 - 2693860
Alignment:
Q  280 tagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||| |||||||||||||||  |||  || ||| |||||||||||||||||||    
T  2693802 tagtgacgtgacagtgattaagtggggggagtaaccaaattttaaatgattaaattttg 2693860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 38955839 - 38955793
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||| | ||||||| |||| ||||||||||||||    
T  38955839 gtggcagtgattaagtgaggagagggatgaaattttaaatgattaaa 38955793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 1231911 - 1231854
Alignment:
Q  81 ggttgttgggtttgatgct-cagcaagaatgtttcatggaggttggttctggaagatt 137  Q
    ||||||||||||||||  | || ||||| |||||||| ||||||||||||||||||||    
T  1231911 ggttgttgggtttgataattcatcaagagtgtttcatagaggttggttctggaagatt 1231854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 20385716 - 20385659
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||| |||||||||||||| ||||| ||||   |||||||||| |||||||||||||    
T  20385716 ctaatcagtgacgtggcagtaattaactgggctcagggacgaaattttaaatgattaa 20385659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 4994939 - 4994995
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||  ||||||||||| |||||||||||| || |||||||||||    
T  4994939 aattagtgacatgacatggattaagtggggagagggacgaaatttgaaatgattaaa 4994995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 37845 - 37901
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  37845 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 37901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 32242388 - 32242332
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  32242388 aattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 32242332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 409
Target Start/End: Complemental strand, 5326185 - 5326071
Alignment:
Q  295 gattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgaccccta 394  Q
    |||||||||||  |||| || ||| |||||| ||||||||||||||  |||||||||  |||||||| ||||  ||| ||||  ||||||||||||||||    
T  5326185 gattaagtgggtggaggaaccaaattttaaaagattaaattttgaaagggcaaaatgccaggattaaggaatgcagggaccattttttaaatgaccccta 5326086  T
Q  395 tttgcaaggattaaa 409  Q
    |||||| ||||||||    
T  5326085 tttgcagggattaaa 5326071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 400
Target Start/End: Original strand, 15644999 - 15645117
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattt 381  Q
    |||| |||||||||||||||||||   |||||||||| |||||||||||||||||||    |||||||||| |||||||| ||||  |  |||||| |||    
T  15644999 gtgatgtggcagtgattaagtgggtgtagggacgaaattttaaatgattaaattttgggagggcaaaatgtcaggattaacgaatacataaaccaatttt 15645098  T
Q  382 taaatgacccctatttgca 400  Q
    ||||||||||  |||||||    
T  15645099 taaatgacccacatttgca 15645117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 5994035 - 5993979
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  5994035 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaa 5993979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 397
Target Start/End: Complemental strand, 12904900 - 12904780
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    ||||||||||||| || |||||||||||| |||||||||||| ||||||| |||||||||||    | |||| ||| |||||||| ||||  ||| ||||    
T  12904900 aattagtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaattttgggaggacaaattgtcaggattaacgaatacagggacca 12904801  T
Q  377 aattttaaatgacccctattt 397  Q
      |||||||||| ||||||||    
T  12904800 ttttttaaatgatccctattt 12904780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 405
Target Start/End: Complemental strand, 20840679 - 20840551
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||   || |  || ||| || ||||||||| || |  ||| ||||    
T  20840679 aattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatcattaaacaatgcaagggtaaattgctaggattaacgattacaggtacca 20840580  T
Q  377 aattttaaatgacccctatttgcaaggat 405  Q
    | ||||||| |||||||| ||||||||||    
T  20840579 atttttaaacgacccctaattgcaaggat 20840551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 35512294 - 35512238
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  35512294 aattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 35512238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 405
Target Start/End: Original strand, 3529133 - 3529252
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaa 385  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||   || || || ||| ||  |||||||| || |  ||| ||||| |||||||    
T  3529133 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaggggtaaattgccaggattaacgattacagggaccaatttttaaa 3529232  T
Q  386 tgacccctatttgcaaggat 405  Q
     |||||||| ||||||||||    
T  3529233 cgacccctaattgcaaggat 3529252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 5024300 - 5024356
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  5024300 aattagtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaaa 5024356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 11047583 - 11047527
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||    
T  11047583 aattagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaaa 11047527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 13963010 - 13962954
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||    
T  13963010 aattagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaaa 13962954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 14194705 - 14194761
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| | |||||||||||||||| |||||||||||| ||||||||||||||    
T  14194705 aattagtgacatagcagtgattaagtggggagagggacgaaattttaaatgattaaa 14194761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 405
Target Start/End: Original strand, 16157137 - 16157265
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaacca 376  Q
    |||||||||| |||||| ||||||||||| |||||||| ||| ||||||||||||||   || |  || ||| ||| |||||||| || |  ||| ||||    
T  16157137 aattagtgacatggcagggattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattatagggacca 16157236  T
Q  377 aattttaaatgacccctatttgcaaggat 405  Q
    | ||||||| |||||||| ||||||||||    
T  16157237 atttttaaacgacccctaattgcaaggat 16157265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 19892590 - 19892646
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  19892590 aattagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaaa 19892646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 29646644 - 29646700
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  29646644 aattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaa 29646700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 38442214 - 38442158
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  38442214 aattagttatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 38442158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 39453446 - 39453390
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  39453446 aattagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaaa 39453390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 24547412 - 24547463
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaaa 24547463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 297274 - 297320
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  297274 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 6758125 - 6758171
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  6758125 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6758171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 14848992 - 14849050
Alignment:
Q  280 tagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||| |||||||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  14848992 tagtgatgtggcagtgattaagtggggtgagggaccaaattttaaatgattaaattttg 14849050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 38475291 - 38475337
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  38475291 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 38475337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 41930653 - 41930607
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  41930653 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 41930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 18247230 - 18247173
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    |||||||||| |||| ||||||||||||| |||||||||||| | |||||||||||||    
T  18247230 aattagtgacatggcggtgattaagtggggagagggacgaaattctaaatgattaaat 18247173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 20857072 - 20856995
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||||||  |||||||||||||||| || |||||||||| ||||  || |||||||||  |||||||    
T  20857072 tgacgtggcagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggatta 20856995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 22869745 - 22869668
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| |||| ||||  || |||||||||  |||||||    
T  22869745 tgacgtggcagtgattaaccgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggatta 22869668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 22870422 - 22870499
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||||||  |||||||| ||||||| ||||||||||||| ||||  || |||||||||  |||||||    
T  22870422 tgacgtggcagtgattaatcgggaagagagacgaaattttaaatgattaatttttacaggggcaaaatgggaggatta 22870499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 28269681 - 28269726
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  28269681 tggcagtgattaagtggggagagggacgaaattttaaatgattaaa 28269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 28771131 - 28771176
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  28771131 tggcagtgattaagtggggagagggacgaaattttaaatgattaaa 28771176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 186565 - 186509
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| ||| ||||||||||||||  ||||||||||| ||||||||||||||    
T  186565 aattagtgacatggtagtgattaagtggggggagggacgaaattttaaatgattaaa 186509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 8322550 - 8322494
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||  || ||||||||||||||| |||||||||||| ||||||||||||||    
T  8322550 aattagtgaaatgacagtgattaagtggggagagggacgaaattttaaatgattaaa 8322494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 17202545 - 17202489
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| || ||||||||| |||||||| |||||    
T  17202545 aattagtgacatggcagtgattaagtggggagggggacgaaattttaaatgcttaaa 17202489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 20814417 - 20814473
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| ||||||||||||||| || |||||||| ||| ||||||||||||||    
T  20814417 aattagtgacatggcagtgattaagtagggagagggacaaaattttaaatgattaaa 20814473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 31482664 - 31482708
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||| |||||||||||| |||||||||||||    
T  31482664 tggcagtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 27587285 - 27587238
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  27587285 cgtggcagtgattaaatggggagagggacgaaattttaaatgattaaa 27587238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 1506104 - 1506058
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  1506104 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 1506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 35920480 - 35920522
Alignment:
Q  291 cagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  35920480 cagtgattaagtggggagagggacgaaattttaaatgattaaa 35920522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 6150589 - 6150544
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||    
T  6150589 tggcaatgattaagtggggagagggacgaaattttaaatgattaaa 6150544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 20857511 - 20857584
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||  |||||||||||||||| || |||||||||| ||||  || |||||||||  |||||||    
T  20857511 gtggcagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggatta 20857584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 13362510 - 13362566
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| || |||||||||||||||| |||| ||| ||| ||||||||||||||    
T  13362510 aattagtgatgtagcagtgattaagtggggagagagactaaattttaaatgattaaa 13362566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 14848869 - 14848753
Alignment:
Q  293 gtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccc 392  Q
    |||||||||||||  ||||||| ||| |||||||||||||||||||    || ||||||  |||||||| ||||  |  |||||  |||||||||| |||    
T  14848869 gtgattaagtggggggagggaccaaattttaaatgattaaattttgggagggaaaaatgcaaggattaaggaatgcacaaaccattttttaaatgatccc 14848770  T
Q  393 tatttgcaaggattaaa 409  Q
    |||||||| ||| ||||    
T  14848769 tatttgcagggactaaa 14848753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 6150702 - 6150757
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  6150702 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 6150757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 11047719 - 11047774
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  11047719 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 11047774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 11761886 - 11761839
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||| |||||||||||| ||| |||||||| ||||||||||||||    
T  11761886 cgtggcaatgattaagtggggagatggacgaaattttaaatgattaaa 11761839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 16157001 - 16156946
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  16157001 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 16156946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 20814281 - 20814226
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  20814281 aattagtgacgtggcagtgattaagttggttaaaggacgaaattttaaatgattaa 20814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 28269568 - 28269513
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  28269568 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 28269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 39453581 - 39453636
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  39453581 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 39453636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 43159096 - 43159151
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  43159096 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 43159151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 16083113 - 16083067
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||| || ||||| |||||| ||||||||||||||    
T  16083113 gtggcagtgattaagttgggagaggtacgaaattttaaatgattaaa 16083067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 27937301 - 27937347
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagttta 323  Q
    |||||||||||||||||||||| |||||| |||||||| ||| ||||    
T  27937301 aattagtgacgtggcagtgatttagtggggagagggacaaaatttta 27937347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 18670334 - 18670289
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||| |||||||||||| ||| |||||||| ||||||||||||||    
T  18670334 tggcaatgattaagtggggagatggacgaaattttaaatgattaaa 18670289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 21978468 - 21978411
Alignment:
Q  81 ggttgttgggtttgatgct-cagcaagaatgtttcatggaggttggttctggaagatt 137  Q
    ||||||||||||||||  | || ||||| |||||||| ||||||||||||||||||||    
T  21978468 ggttgttgggtttgataattcatcaagagtgtttcatagaggttggttctggaagatt 21978411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 13362373 - 13362318
Alignment:
Q  277 aattagtgacgtggcagtgattaag-tgggaagagggacgaaagtttaaatgattaa 332  Q
    ||||||||||||||||||||||||| |||  ||| |||||||| |||||||||||||    
T  13362373 aattagtgacgtggcagtgattaagttggtcaga-ggacgaaattttaaatgattaa 13362318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 20072261 - 20072213
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgatta 331  Q
    |||||||||||||||||  ||||||||||||||||  || |||||||||    
T  20072261 tgacgtggcagtgattatctgggaagagggacgaactttcaaatgatta 20072213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 13311325 - 13311436
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaat 386  Q
    |||||||||||||||| || |||||||||||| ||||||| ||||||||||| |  |||||| ||||| |||||| ||||  | ||||||   |||||||    
T  13311325 gtggcagtgattaagtcgggagagggacgaaattttaaattattaaattttggaagggcaaattgttaagattaacgaatacatgaaccattgtttaaat 13311424  T
Q  387 gacccctatttg 398  Q
    ||||||||||||    
T  13311425 gacccctatttg 13311436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 278 - 409
Target Start/End: Complemental strand, 20563879 - 20563748
Alignment:
Q  278 attagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaa 377  Q
    |||||||||||||| ||| |||| |||| |||| ||| ||| ||||||||||||||||||| ||||||||||    |||||||   |||| | | || ||    
T  20563879 attagtgacgtggcggtggttaattggggagagagactaaattttaaatgattaaattttgtagtggcaaaaaacaaggattagcaaatttacggactaa 20563780  T
Q  378 attttaaatgacccctatttgcaaggattaaa 409  Q
    ||||||||||||||||||||||| ||| ||||    
T  20563779 attttaaatgacccctatttgcagggactaaa 20563748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 405
Target Start/End: Original strand, 5457187 - 5457317
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaac 374  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||  |||||  || ||  ||  |||||||| ||||  | | ||    
T  5457187 ctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaacattgaaagggtaatttgcaaggattaacgaatacaaggac 5457286  T
Q  375 caaattttaaatgacccctatttgcaaggat 405  Q
    ||| ||||||| |||||||| ||||||||||    
T  5457287 caatttttaaacgacccctaattgcaaggat 5457317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 349
Target Start/End: Complemental strand, 11397526 - 11397452
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaa 349  Q
    ||||||||||||||| |||||||||| ||||| ||| ||| ||| ||||||||||||||||||| ||||||||||    
T  11397526 ctaattagtgacgtgacagtgattaattgggatgagagactaaattttaaatgattaaattttgtagtggcaaaa 11397452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 27396883 - 27397005
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaatttt 382  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||   || |||||  || ||| |||||||  || |  ||| ||||| ||||    
T  27396883 tgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcagtggtgaattgtcaggattagcgattacagggaccaattttt 27396982  T
Q  383 aaatgacccctatttgcaaggat 405  Q
    ||| |||||||| ||||||||||    
T  27396983 aaacgacccctaattgcaaggat 27397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 287 - 400
Target Start/End: Original strand, 11400261 - 11400373
Alignment:
Q  287 gtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaat 386  Q
    |||| |||||||||||||| |||| ||  ||| ||||||||||||||||||| ||||||||||    ||||||||  |||| ||| ||||||||||||||    
T  11400261 gtggaagtgattaagtggggagagagaataaattttaaatgattaaattttgcagtggcaaaa-acaaggattaacaaattcagggaccaaattttaaat 11400359  T
Q  387 gacccctatttgca 400  Q
    ||||| ||||||||    
T  11400360 gacccatatttgca 11400373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 3914284 - 3914228
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3914284 aattagtgatgtggcagtgattaagttggaagagggacgaaattttaaatgattaaa 3914228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 285 - 409
Target Start/End: Original strand, 15714582 - 15714706
Alignment:
Q  285 acgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaa 384  Q
    |||||||||||||||||| || ||||| ||||||  |||| ||||||||| |||    |||||||||| |||||||| ||||  ||  ||||| ||||||    
T  15714582 acgtggcagtgattaagtagggagaggaacgaaatgttaagtgattaaatcttggcagggcaaaatgtcaggattaaggaatgcagagaccaatttttaa 15714681  T
Q  385 atgacccctatttgcaaggattaaa 409  Q
    |||||||||||||||| ||| ||||    
T  15714682 atgacccctatttgcagggactaaa 15714706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 28469290 - 28469346
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  28469290 aattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaa 28469346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 32053425 - 32053481
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  32053425 aattagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaa 32053481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 40379915 - 40379859
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  40379915 aattagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaaa 40379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 42731565 - 42731509
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  42731565 aattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaa 42731509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 10935940 - 10935884
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||    
T  10935940 aattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaa 10935884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 45010744 - 45010688
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||    
T  45010744 aattagtgacttggcagtgattaagtggggagatggacgaaattttaaatgattaaa 45010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 285 - 400
Target Start/End: Complemental strand, 7355000 - 7354885
Alignment:
Q  285 acgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaa 384  Q
    |||||||| | ||||||||||  ||||||| ||| |||||||||||||||  |  || |||||||||  | |||||| ||||  ||| ||||| ||||||    
T  7355000 acgtggcaataattaagtggggggagggaccaaattttaaatgattaaatagtttaggggcaaaatgccacgattaacgaatatagggaccaatttttaa 7354901  T
Q  385 atgacccctatttgca 400  Q
    ||||||||||||||||    
T  7354900 atgacccctatttgca 7354885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 17102157 - 17102110
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  17102157 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 17102110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 27991876 - 27991829
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  27991876 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 27991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 12644093 - 12644147
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||    
T  12644093 tgacgtggcagtgattaaccgggaagagggacgaaattttaaatgattaattttt 12644147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 30948420 - 30948466
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  30948420 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 32680855 - 32680901
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  32680855 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 43124440 - 43124490
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  43124440 tgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaa 43124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 45914664 - 45914610
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||    
T  45914664 tgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaattttt 45914610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 4226265 - 4226188
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||||||  ||||||| |||||||| ||||||||||||| ||||  || |||||||||  |||||||    
T  4226265 tgacgtggcagtgattaaccgggaagaaggacgaaattttaaatgattaatttttacaggggcaaaatggaaggatta 4226188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 12643240 - 12643163
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| |||| ||||| || || ||||||  |||||||    
T  12643240 tgacgtggcagtgattaatcgggaagagggacgaaattttaaatggttaatttttgcaggggtaaaatgggaggatta 12643163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 45010893 - 45010942
Alignment:
Q  284 gacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  45010893 gacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaa 45010942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 2640460 - 2640516
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||| |||| ||||||| ||||||||||||||    
T  2640460 aattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaaa 2640516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 23181276 - 23181332
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || ||||||||||||||  |||||||||||| ||||||||||||||    
T  23181276 aattagtgacatgacagtgattaagtggagagagggacgaaattttaaatgattaaa 23181332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 24388965 - 24388909
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||| |||| ||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  24388965 aattggtgatgtggcagtgattaagtggggagagggacgaaattttaagtgattaaa 24388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 403
Target Start/End: Original strand, 32688506 - 32688626
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaatttt 382  Q
    |||||||||||| ||||||||||   |||||||||| |||||||||||||  |||| |  |||||  ||| |||||||  || |  | | ||||||||||    
T  32688506 tgacgtggcagttattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggcaatttgtcaggattagcgattacaaggaccaaatttt 32688605  T
Q  383 aaatgacccctatttgcaagg 403  Q
    |||||||||||| ||||||||    
T  32688606 aaatgacccctaattgcaagg 32688626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 38643696 - 38643636
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||||||||||| |||| |||||||||| ||||||||||||  |||||||||||| ||||    
T  38643696 aattagtgacgtgacagtaattaagtggggagagggacgaaatcttaaatgattaattttt 38643636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 6571150 - 6571031
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaa 385  Q
    |||| ||||||||||||||| |||||||| ||| ||||||||||||||   || |  || ||| ||| |||||||| || |  ||| ||||| |||||||    
T  6571150 cgtgacagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacagggaccaatttttaaa 6571051  T
Q  386 tgacccctatttgcaaggat 405  Q
     |||||||| ||||||||||    
T  6571050 cgacccctaattgcaaggat 6571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 32298996 - 32299043
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  32298996 cgtggcagtgattaagtggggagagggacgaaattttcaatgattaaa 32299043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 409
Target Start/End: Original strand, 18670143 - 18670277
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaac 374  Q
    ||||| |||||||||||||| ||||| ||||   |||||| ||| ||||| |||||||| ||||    |||||| ||  |||||||| ||||  ||| ||    
T  18670143 ctaatcagtgacgtggcagtaattaaatgggcttagggaccaaattttaagtgattaaactttgggagggcaaattgcaaggattaacgaatacagggac 18670242  T
Q  375 caaattttaaatgacccctatttgcaaggattaaa 409  Q
    ||  ||||||| |||||||| ||||||||||||||    
T  18670243 cattttttaaacgacccctaattgcaaggattaaa 18670277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 34928910 - 34928956
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  34928910 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 34928956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 39686794 - 39686840
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  39686794 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 39686840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 45915760 - 45915822
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||| ||||||||||||||||||||  || |||||||||| || ||||||||||||| ||||    
T  45915760 ctaatcagtgacgtggcagtgattaatcggaaagagggacggaattttaaatgattaattttt 45915822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 17886778 - 17886827
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||   |||||||||| |||||||||||||    
T  17886778 tgacgtggcagtgattaagtgggtcaagggacgaaattttaaatgattaa 17886827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 22871570 - 22871615
Alignment:
Q  288 tggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||    
T  22871570 tggcagtgattaagtggggagagggaagaaattttaaatgattaaa 22871615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 409
Target Start/End: Original strand, 23608985 - 23609074
Alignment:
Q  320 tttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccctatttgcaaggattaaa 409  Q
    ||||| ||||||||||||||    ||||||||| |||||||| ||||  ||| ||||  |||||||||| ||||||||||| ||||||||    
T  23608985 tttaagtgattaaattttgacaatgcaaaatgtcaggattaaggaatatagggaccattttttaaatgatccctatttgcagggattaaa 23609074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 37656998 - 37656949
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaat 326  Q
    ||||||||||||| | ||||||||||||| |||||||||||| |||||||    
T  37656998 aattagtgacgtgccggtgattaagtggggagagggacgaaattttaaat 37656949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 47558170 - 47558093
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||| |||| ||||  || |||||||||  |||||||    
T  47558170 tgacgtgacagtgattaatcgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggatta 47558093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 20426617 - 20426673
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||||||| || ||||||| ||||||| ||| |||||||||||||| ||||    
T  20426617 gtgacgtggcagtggtttagtgggatgagggactaaattttaaatgattaaactttg 20426673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 42019879 - 42019935
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| |||||||||||||||| | |||| ||||||| ||||||| ||||||    
T  42019879 aattagtgacatggcagtgattaagtgaggagagagacgaaattttaaataattaaa 42019935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 2640324 - 2640269
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  2640324 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 2640269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 6253608 - 6253561
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||| |||||||||||  |||||||||||| ||||||||||||||    
T  6253608 cgtggcattgattaagtggagagagggacgaaattttaaatgattaaa 6253561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 17885774 - 17885719
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||| ||||   | |||||||| |||||||||||||    
T  17885774 aattagtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaa 17885719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 19204626 - 19204579
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    ||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  19204626 cgtggcaatgattaagtggggagagggacaaaattttaaatgattaaa 19204579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 42731701 - 42731756
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||||||||| ||   | |||||||| |||||||||||||    
T  42731701 aattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 42731756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 400
Target Start/End: Complemental strand, 18855551 - 18855433
Alignment:
Q  282 gtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattt 381  Q
    |||| |||||||| || |||||||   |||||||||| ||||| ||||||| |||||||  || | | | |||||||||| || |  ||| ||||  |||    
T  18855551 gtgatgtggcagtcatcaagtgggttaagggacgaaattttaattgattaacttttgaaagggtagatttttaggattaacgattatagggaccattttt 18855452  T
Q  382 taaatgacccctatttgca 400  Q
    |||||||||||||||||||    
T  18855451 taaatgacccctatttgca 18855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 23608888 - 23608822
Alignment:
Q  343 ggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccctatttgcaaggattaaa 409  Q
    |||||||||  ||||||||  |||  ||| ||||| |||||||||||||||||||||||||| ||||    
T  23608888 ggcaaaatgccaggattaagaaatacagggaccaatttttaaatgacccctatttgcaaggactaaa 23608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 12229354 - 12229415
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||| |||||||||||| ||||||||||   |||||||||| ||| |||||||||| ||||    
T  12229354 aattaatgacgtggcagtcattaagtgggttaagggacgaaatttttaatgattaaactttg 12229415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 17203715 - 17203655
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 337  Q
    ||||| ||||||| |||||||||| |||| | | ||| |||| ||||||||||||||||||    
T  17203715 aattactgacgtgacagtgattaaatggggatatggatgaaattttaaatgattaaatttt 17203655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 27480127 - 27480079
Alignment:
Q  283 tgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgatta 331  Q
    |||||||||||||||||  ||||||||||||||||  || |||||||||    
T  27480127 tgacgtggcagtgattatctgggaagagggacgaactttcaaatgatta 27480079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 41075621 - 41075566
Alignment:
Q  280 tagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||| ||||||||||||||||||||   ||||||| ||| ||||||||||| |||||||    
T  41075621 tagtaacgtggcagtgattaagtgg---gagggaccaaattttaaatgatttaattttg 41075566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 48789085 - 48789141
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||| || || |||| ||||||| ||||||| |||| ||||||||||||||    
T  48789085 aattagtgacatgacaatgatcaagtggggagagggatgaaattttaaatgattaaa 48789141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 360
Target Start/End: Complemental strand, 13753 - 13672
Alignment:
Q  279 ttagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    |||||||||||| |||||||||||||| ||||||||||||  |||||||||||| ||||  || |||||||||  |||||||    
T  13753 ttagtgacgtggtagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatggaaggatta 13672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 14545 - 14630
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggatta 360  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||  |||||||||||| ||||  || |||||||||  |||||||    
T  14545 ctaatcagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatgggaggatta 14630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 1906 - 1859
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaa 333  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  1906 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 1859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 1370 - 1324
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  1370 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 141854 - 141900
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  141854 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 139809 - 139763
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  139809 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 139763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 2289 - 2232
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaat 334  Q
    ||||| |||| |||||||||||||||||| |||||||| ||| |||||||||||||||    
T  2289 aattattgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaat 2232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 21229 - 21275
Alignment:
Q  286 cgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaa 332  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||    
T  21229 cgtggcagtgattaagtggggagagggacggaattttaaatgattaa 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 404
Target Start/End: Original strand, 239831 - 239960
Alignment:
Q  275 ctaattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaac 374  Q
    ||||| ||||| |||||||| ||||||||||   |||||||||| |||||||||||||| |||| |  || ||  ||  |||||||  || |  ||||||    
T  239831 ctaatcagtgatgtggcagtaattaagtgggtgtagggacgaaattttaaatgattaaactttggaagggtaatttgccaggattatcgattacaggaac 239930  T
Q  375 caaattttaaatgacccctatttgcaagga 404  Q
    ||| ||||||||||||||||  ||||||||    
T  239931 caatttttaaatgacccctaagtgcaagga 239960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 9353 - 9294
Alignment:
Q  276 taattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattt 336  Q
    |||||||||||||| ||||||||||||||| || |||||| || ||||| |||||||||||    
T  9353 taattagtgacgtgacagtgattaagtggggag-gggacggaattttaagtgattaaattt 9294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 397
Target Start/End: Original strand, 31218 - 31308
Alignment:
Q  307 agagggacgaaagtttaaatgattaaattttgaagtggcaaaatgttaggattaatgaattaaggaaccaaattttaaatgacccctattt 397  Q
    |||||||||||| ||||| ||||||||||||||   |||||||| |||  ||||| ||||  | | ||||| ||||||||||||| |||||    
T  31218 agagggacgaaattttaagtgattaaattttgatagggcaaaatattataattaaggaatacatggaccaatttttaaatgacccgtattt 31308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 14076 - 14133
Alignment:
Q  280 tagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    |||||||||| || ||||||||||||  ||||||| ||| |||||||||||||||||||    
T  14076 tagtgacgtgacaatgattaagtgggg-gagggaccaaattttaaatgattaaattttg 14133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 23377 - 23316
Alignment:
Q  277 aattagtgacgtggcagtgattaagtgggaagagggacgaaagtttaaatgattaaattttg 338  Q
    ||||| |||||||||||||||||||||||  |||  || ||| |||||||||||||| ||||    
T  23377 aattactgacgtggcagtgattaagtggggggagaaaccaaattttaaatgattaaactttg 23316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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