View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20721_low_12 (Length: 492)

Name: NF20721_low_12
Description: NF20721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20721_low_12
NF20721_low_12
[»] chr2 (17 HSPs)
chr2 (28-479)||(2777060-2777510)
chr2 (25-287)||(2119800-2120064)
chr2 (16-349)||(40612724-40613072)
chr2 (16-242)||(31501129-31501357)
chr2 (35-193)||(4174696-4174854)
chr2 (28-197)||(34458428-34458597)
chr2 (66-241)||(26393702-26393879)
chr2 (26-116)||(694860-694950)
chr2 (16-228)||(15738222-15738436)
chr2 (32-234)||(21833400-21833604)
chr2 (107-197)||(19508504-19508593)
chr2 (32-226)||(29902167-29902363)
chr2 (293-349)||(26172891-26172947)
chr2 (284-349)||(15738078-15738143)
chr2 (293-349)||(20725692-20725748)
chr2 (25-67)||(26172639-26172681)
chr2 (101-182)||(20725488-20725569)
[»] chr5 (8 HSPs)
chr5 (16-475)||(37980020-37980481)
chr5 (28-475)||(24169458-24169874)
chr5 (16-242)||(10825707-10825935)
chr5 (16-195)||(19876482-19876661)
chr5 (16-242)||(7262837-7263066)
chr5 (107-197)||(23067170-23067260)
chr5 (284-344)||(23067363-23067423)
chr5 (293-349)||(7263128-7263184)
[»] chr1 (10 HSPs)
chr1 (29-475)||(18242868-18243317)
chr1 (16-420)||(50914780-50915190)
chr1 (16-243)||(31387430-31387659)
chr1 (27-242)||(15291581-15291798)
chr1 (16-197)||(42463662-42463843)
chr1 (16-248)||(4911922-4912156)
chr1 (28-242)||(27106018-27106234)
chr1 (28-248)||(46192279-46192501)
chr1 (16-181)||(42055805-42055970)
chr1 (425-475)||(50915159-50915209)
[»] chr7 (12 HSPs)
chr7 (16-475)||(10554510-10554972)
chr7 (25-466)||(31593730-31594172)
chr7 (16-248)||(46526403-46526637)
chr7 (16-234)||(42014037-42014257)
chr7 (33-197)||(6272894-6273058)
chr7 (25-341)||(41964241-41964570)
chr7 (293-349)||(11381634-11381690)
chr7 (16-72)||(28507565-28507621)
chr7 (284-351)||(6272733-6272800)
chr7 (260-349)||(11405039-11405133)
chr7 (284-349)||(42014311-42014376)
chr7 (38-182)||(3939852-3939996)
[»] chr8 (9 HSPs)
chr8 (16-475)||(20477372-20477839)
chr8 (256-475)||(8316428-8316647)
chr8 (16-240)||(8317036-8317262)
chr8 (16-234)||(41269761-41269981)
chr8 (16-197)||(44115959-44116140)
chr8 (16-242)||(42095759-42095987)
chr8 (16-228)||(18701177-18701391)
chr8 (284-349)||(18701034-18701099)
chr8 (284-348)||(41270035-41270099)
[»] chr3 (18 HSPs)
chr3 (28-475)||(55150750-55151200)
chr3 (274-475)||(12723-12924)
chr3 (32-242)||(177815-178027)
chr3 (16-228)||(52560990-52561204)
chr3 (25-234)||(18943000-18943211)
chr3 (27-349)||(48164718-48165043)
chr3 (16-151)||(9089-9224)
chr3 (32-147)||(18908117-18908232)
chr3 (28-248)||(45034586-45034808)
chr3 (145-277)||(10809-10943)
chr3 (32-294)||(13825388-13825651)
chr3 (16-97)||(54315423-54315504)
chr3 (284-344)||(52561275-52561335)
chr3 (293-349)||(54315207-54315263)
chr3 (159-197)||(18911887-18911925)
chr3 (284-349)||(177705-177770)
chr3 (284-349)||(23585246-23585310)
chr3 (284-349)||(23600069-23600133)
[»] scaffold0688 (1 HSPs)
scaffold0688 (119-475)||(5433-5790)
[»] chr6 (9 HSPs)
chr6 (32-424)||(33523353-33523759)
chr6 (40-424)||(19268547-19268951)
chr6 (25-242)||(5620229-5620448)
chr6 (25-120)||(2946146-2946241)
chr6 (321-469)||(2434916-2435073)
chr6 (25-171)||(33522380-33522526)
chr6 (334-424)||(33522155-33522246)
chr6 (425-475)||(33522140-33522191)
chr6 (433-475)||(19268532-19268574)
[»] chr4 (5 HSPs)
chr4 (16-227)||(54602557-54602770)
chr4 (25-197)||(12024924-12025096)
chr4 (16-242)||(39388804-39389032)
chr4 (16-188)||(16347123-16347295)
chr4 (284-344)||(39388686-39388746)
[»] scaffold1043 (1 HSPs)
scaffold1043 (16-242)||(2959-3187)
[»] scaffold0079 (1 HSPs)
scaffold0079 (16-188)||(45566-45738)
[»] scaffold0097 (2 HSPs)
scaffold0097 (293-349)||(29521-29577)
scaffold0097 (101-182)||(29317-29398)
[»] scaffold0013 (1 HSPs)
scaffold0013 (25-72)||(62909-62956)


Alignment Details
Target: chr2 (Bit Score: 360; Significance: 0; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 28 - 479
Target Start/End: Original strand, 2777060 - 2777510
Alignment:
Q  28 cagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtc 127  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2777060 cagggagatgcctgacacattgacgatcatccgggatgtgatgcatattgttgacgatattgtggccaggcaagccgagatgactaaagaggagattgtc 2777159  T
Q  128 caggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgat 225  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||  ||||||||||||||||||||||| |||||||    
T  2777160 caggaggtgatgcggatagctagtactagtggccctccccttacttatcagatttccaggcggcgcagggggcagaggcagggtaggcagcatggctgat 2777259  T
Q  226 tattattagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgtaccttttat 325  Q
    ||||||||||||||||| |||||       |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2777260 tattattagactttttttatgtatttttttact---atgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgtacgttttat 2777356  T
Q  326 attattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatgaatttt 425  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2777357 attattttttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattggttattagatgaaaattttagatgaatttt 2777456  T
Q  426 caattgattattggatgaaaatcttagatgaatttgtttaggtaccaaagaatt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2777457 caattgattattggatgaaaatcttagatgaatttgtttaggtaccaaagaatt 2777510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 25 - 287
Target Start/End: Complemental strand, 2120064 - 2119800
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagatt 124  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||||||| | ||| | |||||||||||| |||||||| ||||||||||||||||||    
T  2120064 tgccagggagatgcctgacacactgacgatcatccgagatggggtgcatatagttgatggtattgtggccagacaagccgagatgactaaagaggagatt 2119965  T
Q  125 gtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggct 222  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||   ||||||||||  |||||||||||| |||||||||| | ||    
T  2119964 gtccaggaggtgatgcggatagctagtactagtcgcgttgcccttacttatcagattttcaggcggcgcagggggcagaggcagagtaggcagcatgact 2119865  T
Q  223 gattattattagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatgacat 287  Q
    ||||||||||||  |||||| |||||       ||||||||||||||||||||||||| ||||||    
T  2119864 gattattattaggttttttttatgtattttttgactatgatgatgatgatgtattattgtgacat 2119800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 349
Target Start/End: Complemental strand, 40613072 - 40612724
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||| ||| | ||||||||||||| ||||||||| |||||||||    
T  40613072 ggaggagcatgccagagagatgcctgacacactgacgatcatccgggatgtggttcatatagctaatgatattgtggccaagcaagccgagatgactaaa 40612973  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggc 213  Q
    |||||||||||| |||||||||||||||| ||  |||||  | ||||||||| ||| ||||||||||  ||| |||||||||  |||||||| |||||||    
T  40612972 gaggagattgtctaggaggtgatgcggatggccggtactgatcgccctgcccgtacgtatcagattgtcaggtggcgcagggggcagaggcatggtaggc 40612873  T
Q  214 agcagggctgattattattagactttttta-atgtannnnnnnactatgatgatgatgatgtattattatgaca------------ttttcgtatttcta 300  Q
    ||||||| ||||||| ||||| |||||||  |||||       ||||||||||||||||||||| |||||||||            ||||||||||||||    
T  40612872 agcagggttgattatgattaggcttttttttatgtactttttgactatgatgatgatgatgtataattatgacatgttccatacatttttcgtatttcta 40612773  T
Q  301 tgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    |||||| | |  || ||||||||||||||||  |||||||||| |||||    
T  40612772 tgacattttccgacataccttttatattatttcttgcgttttactttta 40612724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 31501357 - 31501129
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||||||| | ||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  31501357 ggaggagcatgccagagagatgcctgacaaactgacgattatccgggatgtggtgcatatagctgatgatattgtggccaggcaagccgagatgactaaa 31501258  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||| |||||||||||||||||| |||||||  ||||| || ||| ||||||||| |||||||||   ||||| ||||  |||| |||||| | |||||    
T  31501257 gaggatattgtccaggaggtgatgtggatagccggtactggtcgccttgcccttacgtatcagattttcaggcgacgcagggggccgaggcatgctaggc 31501158  T
Q  214 agcagggctgattattattagactttttt 242  Q
    ||||||| ||||| | ||||| |||||||    
T  31501157 agcagggttgattgtgattaggctttttt 31501129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 35 - 193
Target Start/End: Original strand, 4174696 - 4174854
Alignment:
Q  35 atgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccaggagg 134  Q
    |||||| ||||| ||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  4174696 atgcctaacacactgacgatcatccgggatgtggtgcatatagctgatgatattgtggccagacaagccgagatgactaaagaggagattgtccaggagg 4174795  T
Q  135 tgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgc 193  Q
    |||||||||||||  ||||| || |||||||| |||| ||||||||||| | |||||||    
T  4174796 tgatgcggatagccggtactggtcgccctgccgttacgtatcagattgccaagcggcgc 4174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 34458428 - 34458597
Alignment:
Q  28 cagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtc 127  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||| |||||||    
T  34458428 cagggagatgcctgacacactgacgatcattcgggatgtggtgcatatagctgatgatattgtggccaggcaagccgagatgattaaagaggtgattgtc 34458527  T
Q  128 caggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    ||||||||||| | ||||||  ||||  ||  |||||||||||| ||||||||||| |||||||||||||    
T  34458528 caggaggtgatacagatagcaggtaccggtctccctgcccttacatatcagattgccaggcggcgcaggg 34458597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 26393702 - 26393879
Alignment:
Q  66 tggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccaggaggtgatgcggatagctagtactagtggccctgc 165  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||    
T  26393702 tggtgcatatagctgacgatattgtggccaggcaatccgagatgactaaagaggagattgtccaggaggtgatgtggatagccagtactggttgccctgc 26393801  T
Q  166 ccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgattattattagacttttt 241  Q
    |||||| ||||||||| |  |||| ||||  |||| |||||| | ||| |||||||| ||||||| ||||| ||||||    
T  26393802 ccttacgtatcagattacccggcgacgcagggggccgaggcatgctagtcagcagggttgattatgattaggcttttt 26393879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 694950 - 694860
Alignment:
Q  26 gccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaag 116  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||  |||| ||||||||||| ||||||||||| ||||||||||    
T  694950 gccagggagatgcctgacacactgacgatcatccgggatgtggtgcatataactgatgatattgtggctaggcaagccgagatgactaaag 694860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 15738436 - 15738222
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||  ||||||||||||| || |||||  |||||||| | |||   | | | |||||||||    
T  15738436 ggaggagcatgccagagagatgcctgacacactgacgatcattagggatgtggtgcagatagctgataatattgtgtctaggagcggcaagatgactaaa 15738337  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||| | |||  |||||||||| ||||| |  |||||  || ||||||||||||| ||||||||||| ||||  ||||  |||||||||||  |||| |    
T  15738336 gaggatactgtttaggaggtgattcggattggcagtaccggtcgccctgcccttacgtatcagattgccaggcatcgcagggggcagaggcatcgtagac 15738237  T
Q  214 agcagggctgattat 228  Q
    || ||||||||||||    
T  15738236 agtagggctgattat 15738222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 21833400 - 21833604
Alignment:
Q  32 gagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccagg 131  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  | |||||  || ||||||||| ||| |  || ||||||||||||||| |||| ||||    
T  21833400 gagatccctgacacattgacaatcatcagggatgtcgtgcaggtggctgataatgttgtggccatgcaggaagagatgactaaagaggagcttgtgcagg 21833499  T
Q  132 aggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgattatt 229  Q
    || |||| ||||| | ||||||| || ||||||||||||| ||||  ||||  ||||  | ||  |||||||||||  ||||||||||| | |||||||     
T  21833500 agatgatccggattggtagtactggtcgccctgcccttacatatcgaattgtcaggcatctcagggggcagaggcatcgtaggcagcagagttgattatc 21833599  T
Q  230 attag 234  Q
    |||||    
T  21833600 attag 21833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 19508504 - 19508593
Alignment:
Q  107 atgactaaagaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| || | | || |||||| ||||||||||| ||||||| |||||    
T  19508504 atgactaaagaggagattgtccaggaggtgatgcggatagccggtactggtcg-catgtccttacgtatcagattgccaggcggcacaggg 19508593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 226
Target Start/End: Original strand, 29902167 - 29902363
Alignment:
Q  32 gagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccagg 131  Q
    |||||||  |||||| ||||||||||| ||||||||||||| || |||||  ||||||||| ||||   | ||| |||||||||||||||||  | ||||    
T  29902167 gagatgctcgacacactgacgatcatccgggatgtggtgcagatagctgataatattgtggtcaggagtggcgagatgactaaagaggagatatttcagg 29902266  T
Q  132 aggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgatt 226  Q
    ||||||| ||||| |  | |||| || ||||||||||||| |||  |||| | |||| ||| |  |||||||| ||  ||||||||||||| |||||    
T  29902267 aggtgattcggattggcactactggtcgccctgcccttacatattggatttccaggcagcgtagggggcagagacatcgtaggcagcagggttgatt 29902363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 26172891 - 26172947
Alignment:
Q  293 tatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  26172891 tatttctataacatttacgtacgtaccttttatattatttcttgcgttttaatttta 26172947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 15738143 - 15738078
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||| ||||||||||||||| | ||||| ||||||||||||||||  |||||| |||||||||    
T  15738143 acattttagtatttctatgacattttcgtacataccttttatattatttcttgcgtattaatttta 15738078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 20725692 - 20725748
Alignment:
Q  293 tatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    |||||||||||||| ||||||||||||||||||||||||  ||| |||||| |||||    
T  20725692 tatttctatgacatttacgtacgtaccttttatattatttcttgtgttttattttta 20725748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 26172639 - 26172681
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtg 67  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||    
T  26172639 tgccagagagatgcctgacacactgacgatcatcagggatgtg 26172681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 20725488 - 20725569
Alignment:
Q  101 gccgaaatgactaaagaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattg 182  Q
    ||||| ||||||||||||||| | || |||||| |||| ||||| |  |||||| || ||||||||||||  ||||||||||    
T  20725488 gccgagatgactaaagaggagctcgtgcaggagatgatccggattggcagtactggtcgccctgcccttatgtatcagattg 20725569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 16 - 475
Target Start/End: Complemental strand, 37980481 - 37980020
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37980481 ggaggagcatgccagggagatgtctgacacactgacgatcatccgggatgtggtgcatattgctgacgatattgtggccaggcaagccgagatgactaaa 37980382  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggc 213  Q
    |||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||| ||||  |||||||||||||| |    
T  37980381 gaggagattgtccacgaggtgatgctgatagc-agtactagtcgccctgcccttacttatcagattgccaggcggcgtaggggtcagaggcagggtagac 37980283  T
Q  214 agcagggctgattattattagactttttta-atgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgt 312  Q
    ||||||||||||||||||||| |||||||  |||||       ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  37980282 agcagggctgattattattaggcttttttttatgtattttttgactatgatgataatgatgtattattatgacattttcatatttctatgacatttacgt 37980183  T
Q  313 acgtaccttttatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaatt 412  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  37980182 acgtacgttttatattatttcttgcgttttaattttaccattttcctgttaaatattgcatgaatatgtttaggtatcaattggttattagattaaaatt 37980083  T
Q  413 ttagatgaattttcaattgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  37980082 ttagatgaattttcaattggttattgaatgaaaatcttagatgaatttgtttaggtaccaaag 37980020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 28 - 475
Target Start/End: Original strand, 24169458 - 24169874
Alignment:
Q  28 cagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtc 127  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  24169458 cagggagatgcctgacacactgacgatcatccaagatgtggtgcatattgctgacgatattgtggccaggcaagccgagatgactaaaaaggagattgtc 24169557  T
Q  128 caggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcagggcagaggcagggtaggcagcagggctgatta 227  Q
    |||||||||||||||||||||||||||||| |  ||||||||| |||||||||||  |||||||||||||           |||||||||||||||||||    
T  24169558 caggaggtgatgcggatagctagtactagtcgtactgcccttaattatcagattgtcaggcggcgcaggg-----------taggcagcagggctgatta 24169646  T
Q  228 ttattagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgtaccttttatat 327  Q
    ||||||| ||||||| |||||       ||||||||||||||||||||||||||||||||||                   |||||||||| ||||||||    
T  24169647 ttattaggctttttttatgtatttttg-actatgatgatgatgatgtattattatgacattt-------------------acgtacgtacgttttatat 24169726  T
Q  328 tattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatgaattttca 427  Q
    ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  24169727 tatttcttgcgttttaattttaccattttcttgttaaatattggatgaatatgtttaggtatcaattggttattaaatgaaaattttagatgaattttca 24169826  T
Q  428 attgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  24169827 attggttattggatgaaaatcttagatgaatttgtttaggtaccaaag 24169874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 10825935 - 10825707
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| |||||||||    
T  10825935 ggaggagcatgctagggagatgcctgacacactgacgatcatccgggatgtggtgcatatagctgatgatattgtggtcaggcaagccgagatgactaaa 10825836  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||||||||||||||||||||||||||||||  ||||| || ||||||||||||| ||||||||||| ||||||||||  |||| |||||| | |||||    
T  10825835 gaggagattgtccaggaggtgatgcggatagccggtactggtcgccctgcccttacgtatcagattgccaggcggcgcagggggccgaggcatgctaggc 10825736  T
Q  214 agcagggctgattattattagactttttt 242  Q
    || |||| ||||| | ||||| |||||||    
T  10825735 agtagggttgattgtgattaggctttttt 10825707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 19876482 - 19876661
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||| |||||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||    
T  19876482 ggaggagcatgccatggagatgcctgacacactaacgatcatccgggatgtggtgcatatagctgatgatattgtggccaggcaagtcgagatgactaaa 19876581  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcag 195  Q
    |||||||||||| |||||||||||||||||||  ||||| || ||||||||||||| ||||||||||| |||| ||||||    
T  19876582 gaggagattgtctaggaggtgatgcggatagccggtactggtcgccctgcccttacgtatcagattgccaggcagcgcag 19876661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 7262837 - 7263066
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||| |||||  |||||||||| | |||||||||||||| |||||||||||||||| |||||||||| | |||||||||    
T  7262837 ggaggagcatgccagagagatgcctaacacaccgacgatcatccgagatgtggtgcatatagctgacgatattgtggtcaggcaagccaagatgactaaa 7262936  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca---gggcagaggcagggtagg 212  Q
    ||||| ||||||||||||||||||||||||||  ||||| || ||||| ||||||| ||||||||| | ||||||||||   |||| |||||| | ||||    
T  7262937 gaggatattgtccaggaggtgatgcggatagccggtactggtcgcccttcccttacgtatcagattaccaggcggcgcaggggggccgaggcatgctagg 7263036  T
Q  213 cagcagggctgattattattagactttttt 242  Q
    |||||||| ||||||| || || |||||||    
T  7263037 cagcagggttgattatgataaggctttttt 7263066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 23067170 - 23067260
Alignment:
Q  107 atgactaaagaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||| || ||||||||||||| ||||||||| | |||||||||||||    
T  23067170 atgactaaagaggagattgtccaggaggtgatggggatagccggtactggtcgccctgcccttacgtatcagattaccaggcggcgcaggg 23067260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 23067363 - 23067423
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaa 344  Q
    |||||||| |||||||||||||| |  | |||||||||||||||||||  |||||||||||    
T  23067363 acattttcttatttctatgacatttttggacgtaccttttatattatttcttgcgttttaa 23067423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 7263128 - 7263184
Alignment:
Q  293 tatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    |||||||||||||| | |  || ||||||||||||||||  ||||||||||||||||    
T  7263128 tatttctatgacattttccgacataccttttatattatttcttgcgttttaatttta 7263184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 29 - 475
Target Start/End: Original strand, 18242868 - 18243317
Alignment:
Q  29 agggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtcc 128  Q
    |||||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||     
T  18242868 agggagatgcctgacacactgacgatcatcccggatctggtgcatattgctgacgatattgtggccaggcaagccgatatgactaaagaggagatcgtct 18242967  T
Q  129 aggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggcagcagggctgatt 226  Q
    |||||||||| | |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  18242968 aggaggtgatacagatatctagtactagtcgccctgcccttacttatcagattgccaggcggcgcagggggcagaggcagggtaggcagcagggctgatt 18243067  T
Q  227 attattagactttttta-atgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgtaccttttat 325  Q
    |||||||| |||||||  |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  18243068 attattaggcttttttttatgtatttttttactatgatgatgatgatgtattattatgacattttcgtatttctatgacatttatgtacgtacattttat 18243167  T
Q  326 attattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatgaatttt 425  Q
    ||||||  ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  18243168 attatttcttgagttttaattttacaattttcctattaaatattggatgaatatgtttaggtatcaattggttattagatgaacattttagatgaatttt 18243267  T
Q  426 caattgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18243268 caattggttattggatgaaaatcttagatgaatttgtttagataccaaag 18243317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 420
Target Start/End: Original strand, 50914780 - 50915190
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||||||||||||||||||| ||| ||||||| | |||||||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  50914780 ggaggagcatgccagggagatgcctgacacactgaggatcatccgagatgtggtgcatattgttgacgatattgtggccaggcaagccgagacgactaaa 50914879  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggc 213  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||  |||||||||||||  |||||| |||||||||    
T  50914880 gaggagatcgtccaggaggtgatgcggatagctagtactagccgccctgcccttacttatcaaattgtcaggcggcgcaggggccagaggtagggtaggc 50914979  T
Q  214 agcagggctgattattattagac----ttttttaatgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatata 309  Q
    ||||||||||||||||||||| |    |||||| |||||       ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  50914980 agcagggctgattattattaggctttttttttttatgtattttttgactatgatgatgatgatgtattattattacattttcgtatttctatgaccttta 50915079  T
Q  310 cgtacgtaccttttatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaa 409  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  50915080 cgtacgtacgttttatattatttcttgcgttttaattttaccattttcctattaaatattggatgaatatgtttaggtatcaattggttattggatgaaa 50915179  T
Q  410 attttagatga 420  Q
    || ||||||||    
T  50915180 atcttagatga 50915190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 31387430 - 31387659
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  31387430 ggaggagcatgccagggagatgcctgacacactgacgatcatccgggatgtggtgcatatagctgatgatattgtggccaggcaagccgagatgactaaa 31387529  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||||| |||||||||||||||| |||||||  ||||| || ||||||||||||| ||||||||||| ||||||||||  |||| |||||| | |||||    
T  31387530 gaggagactgtccaggaggtgatgtggatagccggtactggtcgccctgcccttacgtatcagattgccaggcggcgcagggggccgaggcatgctaggc 31387629  T
Q  214 agcagggctgattattattagactttttta 243  Q
    ||||||| ||||| | ||||| ||||||||    
T  31387630 agcagggttgattgtgattaggctttttta 31387659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 15291798 - 15291581
Alignment:
Q  27 ccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgt 126  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||| ||||||||||    
T  15291798 ccagggagatgtctgacacactgacgatcatccgggatgtggtgcatatagctgatgatattgtggtcaggcaagccgagatgactaaataggagattgt 15291699  T
Q  127 ccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgc--agggcagaggcagggtaggcagcagggctga 224  Q
    |||||||||||| ||||||||  ||| | || | ||||||||||| ||||||||||| |||||||||  ||||| |||||| | ||||||| | || |||    
T  15291698 ccaggaggtgatacggatagccggtattggtcgtcctgcccttacgtatcagattgccaggcggcgcagagggccgaggcatgctaggcagtaaggttga 15291599  T
Q  225 ttattattagactttttt 242  Q
    |||| ||||| |||||||    
T  15291598 ttatgattaggctttttt 15291581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 42463843 - 42463662
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||||||| ||||||||||||| |||||||| | ||||||||| |||||||||||||||| ||||| |||||||||| |||| ||||||| ||||||||     
T  42463843 ggagaagcatgccagggagatgtctgacacactaacgatcatccgggatgtggtgcatatagctgatgatattgtggtcaggaaagccgagatgactaac 42463744  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    ||||||||||||||||||||||||||||||||  ||||| || ||||||||||||| ||| ||||||  |||||||||||||    
T  42463743 gaggagattgtccaggaggtgatgcggatagccggtactggtcgccctgcccttacgtattagattgtcaggcggcgcaggg 42463662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 4912156 - 4911922
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||||  | || ||||||||||||||||||||||| |||||||||    
T  4912156 ggaggagcatgccaggaagatgcctgacacactgacgatcatccgggatgtggtgcatataaccgatgatattgtggccaggcaagccgagatgactaaa 4912057  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||| ||||||||||||||||||||||| ||||  ||| | || ||||||||||||  ||||||||||| ||||||||||  |||| ||||||   |||||    
T  4912056 gagaagattgtccaggaggtgatgcgggtagccggtattggtcgccctgcccttatatatcagattgccaggcggcgcagggggctgaggcatactaggc 4911957  T
Q  214 agcagggctgattattattagacttttttaatgta 248  Q
    |||| || ||||| | ||||| ||||||| |||||    
T  4911956 agcatggttgattgtgattaggctttttttatgta 4911922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 27106234 - 27106018
Alignment:
Q  28 cagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtc 127  Q
    |||||||||| |||||||| ||||||||||| ||||| |||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||| ||    
T  27106234 cagggagatgtctgacacactgacgatcatccgggatatggtgcatatagctgatgatattgtggtcaggcaagccgagatgactaaagaggagattttc 27106135  T
Q  128 caggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgat 225  Q
    ||||||||||||||||||||  ||||| || ||||||||||||  ||||||||||  |||||||| |  |||| |||||| | ||||||||| || ||||    
T  27106134 caggaggtgatgcggatagccggtactggtcgccctgcccttatgtatcagattgtcaggcggcgtagggggccgaggcatgctaggcagcatggttgat 27106035  T
Q  226 tattattagactttttt 242  Q
    | | ||||| |||||||    
T  27106034 tgtgattaggctttttt 27106018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 28 - 248
Target Start/End: Complemental strand, 46192501 - 46192279
Alignment:
Q  28 cagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtc 127  Q
    |||||||||| |||||||| | ||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  46192501 cagggagatgtctgacacactcacgatcatccgggatgtggtgcatatagttgatgatattgtggccaggcaagccgagatgactaaagaggagattgtc 46192402  T
Q  128 caggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgat 225  Q
    | |||||||||||||||| |  |||||||| ||||| ||||||  ||||||||||  ||||| || |  |||| ||||||   ||||||||| |  ||||    
T  46192401 ctggaggtgatgcggataaccggtactagtcgccctccccttatgtatcagattgtcaggcgacgtagggggccgaggcattctaggcagcacgtttgat 46192302  T
Q  226 tattattagacttttttaatgta 248  Q
    ||| ||||||||||||| |||||    
T  46192301 tatgattagactttttttatgta 46192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 42055970 - 42055805
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||| |||||||||||||||| |||||||||||  |||||| |||||||| | ||  ||||||||||||| | |||| || |||||||||    
T  42055970 ggaggagcatgccaaggagatgcctgacacactgacgatcatccaggatgttgtgcatatagttggtgatattgtggccaagaaagctgagatgactaaa 42055871  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagatt 181  Q
    ||||||||||||||||||||||||||||||||  ||||| || ||||||||||||| |||||||||    
T  42055870 gaggagattgtccaggaggtgatgcggatagccggtactggtcgccctgcccttacgtatcagatt 42055805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 50915159 - 50915209
Alignment:
Q  425 tcaattgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    ||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  50915159 tcaattggttattggatgaaaatcttagatgattttgtttagataccaaag 50915209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 16 - 475
Target Start/End: Original strand, 10554510 - 10554972
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  10554510 ggaggagcatgccaaggagatgcctgacacattgacgatcatccgggatgtggtgcatattggtgacgatattgtggccaggcaagccgagatgactaaa 10554609  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggc 213  Q
    ||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||  ||||||||||||||      
T  10554610 gaggagattatccaggaggtgatgtagatagctagtactagtcgccctgcccttacttatcaaattgccaggcgacgcaggggccagaggcagggtagat 10554709  T
Q  214 agcagggctgattattattagactttttta-atgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgt 312  Q
    |||||||||| |||||||||| |||||||  |||||       ||||||||||||||||||||||||||||||||||||  |||||||||| || ||| |    
T  10554710 agcagggctggttattattaggcttttttttatgtattttttgactatgatgatgatgatgtattattatgacattttcaaatttctatgaaatttactt 10554809  T
Q  313 acgtaccttttatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaatt 412  Q
    | |||| ||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10554810 atgtacgttttatattatttcttgtgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattggttattaaatgaaaatt 10554909  T
Q  413 ttagatgaattttcaattgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10554910 ttagatgaattttcaattggttattggatgaaaatcttagatgaatttgtttaggtaccaaag 10554972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 25 - 466
Target Start/End: Original strand, 31593730 - 31594172
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagatt 124  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||||     
T  31593730 tgccagggagatgcctgacacactgacgatcatccgggatgtggtgcaaattgctgacgatattgtggctagccaagccgagatgactaaagaggagatc 31593829  T
Q  125 gtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcagggc-agaggcagggtaggcagcagggctg 223  Q
    ||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||    
T  31593830 gtctaggatttgatgcggatagctagtactagtcgccctgcccttacttatcagatttccaggcggcgcaggggtagaggcagggtaggcagcagggctg 31593929  T
Q  224 attattattagacttttttaatgtannnnnnn-actatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgtaccttt 322  Q
    ||||||||||| |||||||| ||||        |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||   |||    
T  31593930 attattattaggctttttta-tgtatttttttgactatgatgatgatgatgtattattatgacattttcatatttctatgacatttacgtacgtttgttt 31594028  T
Q  323 tatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatgaat 422  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  31594029 tatattatttcttgcgttttaattttaccattttcctattaaatattagatgaatatgtttaggtatcaattggttattagatgaacattttagatgaat 31594128  T
Q  423 tttcaattgattattggatgaaaatcttagatgaatttgtttag 466  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  31594129 tttcaattggttattggatgaaaatcttagatgaatttgtttag 31594172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 46526637 - 46526403
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| | || |||||||||||| ||||||||||| |||||||||    
T  46526637 ggaggagcatgccagggagatgcctgacacactgacgatcatccgggatgtggtgcatatagttggcgatattgtggctaggcaagccgagatgactaaa 46526538  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||||||||||||| ||||||||||||||||  |||||||| ||||||||||||| ||||||||||| ||||||||||  |||| |||||| | |||||    
T  46526537 gaggagattgtccagtaggtgatgcggatagccggtactagtcgccctgcccttacgtatcagattgccaggcggcgcagggggccgaggcatgctaggc 46526438  T
Q  214 agcagggctgattattattagacttttttaatgta 248  Q
    ||||||| ||||||| |||||  |||||| |||||    
T  46526437 agcagggttgattatgattagggtttttttatgta 46526403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 42014037 - 42014257
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  42014037 ggaggagcatgccagagagatgcctgacacattgacgatcatccgagatgtggtgcatatagctgatgatattgtggccaggcaagccgagatgactaaa 42014136  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||| ||||| ||||||||||||||||| ||||  ||||| || ||||| ||||||| |||||||||||||||||| |||  |||| |||||| | |||||    
T  42014137 gagaagattttccaggaggtgatgcgggtagccggtactggtcgccctacccttacgtatcagattgctaggcggagcagggggccgaggcatgctaggc 42014236  T
Q  214 agcagggctgattattattag 234  Q
    ||||| | ||||||| |||||    
T  42014237 agcagagttgattatgattag 42014257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 33 - 197
Target Start/End: Complemental strand, 6273058 - 6272894
Alignment:
Q  33 agatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccagga 132  Q
    |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  6273058 agatgcctgacacattaacgatcatctgggatgtggtgcatatagttgacgatattgtggccaggcaagacgagatgactaaagaggagattgtccagga 6272959  T
Q  133 ggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    |||||||||||||||  ||||| ||  |||||||||||| ||||||||| | |||||||||||||    
T  6272958 ggtgatgcggatagccggtactggtcaccctgcccttacgtatcagatttccaggcggcgcaggg 6272894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 25 - 341
Target Start/End: Original strand, 41964241 - 41964570
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagatt 124  Q
    ||||||||||||   ||||| | ||||||||||| ||||||||||| |||| | ||| |||||||||| |||||||||||| ||||||||||||||||||    
T  41964241 tgccagggagatttttgacagactgacgatcatccgggatgtggtgaatatagttgatgatattgtggtcaggcaagccgagatgactaaagaggagatt 41964340  T
Q  125 gtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggct 222  Q
     ||||||||||||||||||||||  ||||| || ||||||||||||| ||||||||||| || || ||||  |||  |||||| | ||||||| |||| |    
T  41964341 ttccaggaggtgatgcggatagccggtactggtcgccctgcccttacgtatcagattgccagacgacgcagggggtcgaggcatgctaggcagtagggtt 41964440  T
Q  223 gattattattagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatg-----------acattttcgtatttctatgacatatacg 311  Q
    |||||| ||||  ||||||| |||||       ||| |||||||  |||||||| ||||||           |||||||| |||||||||||||| | ||    
T  41964441 gattatgattaagctttttttatgtacttttttactgtgatgatcgtgatgtataattatgacatgttccgtacattttcttatttctatgacattttcg 41964540  T
Q  312 tacgtaccttttatattattgtttgcgttt 341  Q
     |||||||||||||||||||  ||||||||    
T  41964541 gacgtaccttttatattatttcttgcgttt 41964570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 11381690 - 11381634
Alignment:
Q  293 tatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||| |||||    
T  11381690 tatttctatgacattttcgtacgtaccttttatattatttcttgcgttttattttta 11381634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 28507621 - 28507565
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgca 72  Q
    |||| ||| |||||| |||||| |||||||||||||||||||| ||||||| |||||    
T  28507621 ggaggagcatgccagagagatgtctgacacattgacgatcatcagggatgtcgtgca 28507565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 351
Target Start/End: Complemental strand, 6272800 - 6272733
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaattttacc 351  Q
    ||||||| |||||| |||||||| | |  || ||| |||||||||||| |||||||||||||||||||    
T  6272800 acattttggtatttgtatgacattttccgacatactttttatattattttttgcgttttaattttacc 6272733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 11405133 - 11405039
Alignment:
Q  260 tgatgatgatgatgtattattatgacattttcgt-----atttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    |||||||| ||||||||||||||||||||  | |     ||||||||||||| | |||||||||| |||||||||||  |||| ||||| |||||    
T  11405133 tgatgatggtgatgtattattatgacattaccttgtgatatttctatgacattttcgtacgtaccatttatattatttcttgcattttattttta 11405039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 42014311 - 42014376
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||| |||||| |||||||| | |  || ||||||||||||||||  ||||||||||||||||    
T  42014311 acattttggtatttgtatgacattttccgacataccttttatattatttcttgcgttttaatttta 42014376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 182
Target Start/End: Original strand, 3939852 - 3939996
Alignment:
Q  38 cctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccaggaggtga 137  Q
    ||||||||| ||||||||||  ||||||| ||||| || | |||  || ||||||||| |   ||||| || |||||||||||| | || |||||| |||    
T  3939852 cctgacacactgacgatcattagggatgtcgtgcagatagttgataatgttgtggccatgagcgccgagataactaaagaggagctggtgcaggagatga 3939951  T
Q  138 tgcggatagctagtactagtggccctgcccttacttatcagattg 182  Q
    | ||||| |  |||||| || ||||| ||||||  ||||||||||    
T  3939952 tccggattggcagtactggtcgccctacccttatgtatcagattg 3939996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 295; Significance: 1e-165; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 16 - 475
Target Start/End: Complemental strand, 20477839 - 20477372
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  20477839 ggaggagcatgccagggagatgcctgacacactgacgatcatatgggatgtggtgcatattgctgatgatattgtggccaggcatgccgagatgactaaa 20477740  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggc 213  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||  |||||||||||||||     
T  20477739 gaggagatcgtccaggaggtgatgcggatagctagtactagtcgccctgcccttacttatcatattgcgaggcggcgcagggggcagaggcagggtagga 20477640  T
Q  214 agcagggctgattattattagactttttta--atgtannnnnnn-actatgatgatg---atgatgtattattatgacattttcgtatttctatgacata 307  Q
    | || |||||||||||||||| |||||||   |||||        ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  20477639 aacatggctgattattattaggctttttttttatgtattttttttactatgatgatgttgatgatgtattattatgacattttcgtatttctatgacatt 20477540  T
Q  308 tacgtacgtaccttttatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatga 407  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  20477539 tacgtacgtacgttttatattatttcttgcgttttaattttaccattttcctattaaatattggatgaatatgcttaggtatcaattggttattagatga 20477440  T
Q  408 aaattttagatgaattttcaattgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    | |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  20477439 acattttagatgaatttttaattggttattggatgaaaatcttagatgaatttgtttagataccaaag 20477372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 256 - 475
Target Start/End: Complemental strand, 8316647 - 8316428
Alignment:
Q  256 actatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaattttaccattt 355  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  8316647 actatgatgatgataatgtattattatgacatttttgtatttctatgacatttacgtacgtacgttttatattatttcttgcgttttaattttaccattt 8316548  T
Q  356 tcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatgaattttcaattgattattggatgaaaatcttagatg 455  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8316547 tcgtgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatgaattttcaattggttattggatgaaaatcttagatg 8316448  T
Q  456 aatttgtttaggtaccaaag 475  Q
    ||||||||||||||||||||    
T  8316447 aatttgtttaggtaccaaag 8316428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 8317262 - 8317036
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| || ||||||    
T  8317262 ggaggagcatgccagggagatgcttgacacactgacgatcatccgggatgtggtgcatattgctgacgatattgtggccaagcaaaccgagatcactaaa 8317163  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
     ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||   ||||||| || | ||||     
T  8317162 taggagattgtccaggaggtgatgcggatagctactactagtcgccctgcccttacttatcagattgccaggcggcgcatgaggcagagacatgctaggt 8317063  T
Q  214 agcagggctgattattattagactttt 240  Q
    ||||||| ||||| | ||||| |||||    
T  8317062 agcagggttgattgtgattaggctttt 8317036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 41269761 - 41269981
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||    
T  41269761 ggaggagcatgccagagagatgcctgacacactgacgatcatccgggatgtggtgcatatagctgatgatattgtggccaggcaaaccgagatgactaaa 41269860  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    |||||||||||||| |||||||||||||||||  ||||| || ||||||||||||| ||||||||||| ||||||||||  ||||  ||||| | |||||    
T  41269861 gaggagattgtccaagaggtgatgcggatagccggtactggtcgccctgcccttacgtatcagattgccaggcggcgcagggggccaaggcatgctaggc 41269960  T
Q  214 agcagggctgattattattag 234  Q
    ||||||| ||||||| |||||    
T  41269961 agcagggttgattatgattag 41269981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 44116140 - 44115959
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||| ||||| |||||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  44116140 ggaggagcatgccaaggagacgcctgacacactgacgatcatctaggatgtggtgcatatagctgatgatattgtggccaggcaagccgagatgactaaa 44116041  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    ||||||||||||||||||||||||||||||||  ||||  || ||||||||||||| ||||||||||||||| |||||||||    
T  44116040 gaggagattgtccaggaggtgatgcggatagccggtaccggtcgccctgcccttacgtatcagattgctaggtggcgcaggg 44115959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 42095987 - 42095759
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| || ||| |||||||  ||||||||||| | ||||||||||||||   ||| ||||||||||| ||||||||||| |||||||||    
T  42095987 ggaggagcatgccagagaaatgtctgacacgctgacgatcatccgagatgtggtgcatatatttgatgatattgtggctaggcaagccgagatgactaaa 42095888  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    |||||||||||||||||||||||||||||||   ||| | || ||||||||||||| ||||||||||| ||||||||||  |||| |||||| | |||||    
T  42095887 gaggagattgtccaggaggtgatgcggatagtcggtattggtcgccctgcccttacgtatcagattgccaggcggcgcagggggccgaggcatgctaggc 42095788  T
Q  214 agcagggctgattattattagactttttt 242  Q
    |||| || | ||||| |||||||||||||    
T  42095787 agcaaggttcattatgattagactttttt 42095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 18701391 - 18701177
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||  ||||||||||||| || |||||  |||||||| | |||   | | | |||||||||    
T  18701391 ggaggagcatgccagagagatgcctgacacactgacgatcattagggatgtggtgcagatagctgataatattgtgtctaggagcggcaagatgactaaa 18701292  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||| | |||  |||||||||| ||||| |  |||||  || ||||||||||||| ||||||||||| ||||  ||||  |||||||||||  |||| |    
T  18701291 gaggatactgtttaggaggtgattcggattggcagtaccggtcgccctgcccttacgtatcagattgccaggcatcgcagggggcagaggcatcgtagac 18701192  T
Q  214 agcagggctgattat 228  Q
    || ||||||||||||    
T  18701191 agtagggctgattat 18701177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 18701099 - 18701034
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||| ||||||||||||||| | ||||| ||||||||||||||||  |||||| |||||||||    
T  18701099 acattttagtatttctatgacattttcgtacataccttttatattatttcttgcgtattaatttta 18701034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 41270035 - 41270099
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttt 348  Q
    ||||||| |||||| |||||||| | |  || ||||||||||||||||  |||||||||||||||    
T  41270035 acattttggtatttatatgacattttccgacataccttttatattatttcttgcgttttaatttt 41270099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 289; Significance: 1e-162; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 28 - 475
Target Start/End: Original strand, 55150750 - 55151200
Alignment:
Q  28 cagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtc 127  Q
    ||||||||||| ||||||| ||| ||||||| | ||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||| |||    
T  55150750 cagggagatgc-tgacacactgatgatcatccgagatgtggtgcatattgctgacgatattatggtcaggcaagccgagaggactaaagaggagatcgtc 55150848  T
Q  128 caggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggcagcagggctgat 225  Q
     ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| | |||||    
T  55150849 taggaggtgatgcggataactagtactagtcgccctgcccttacttatcagattgccaggcggcgcagggggcagaggcagggtaggcagcatgactgat 55150948  T
Q  226 tattattagactttttta--atgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgtacctttt 323  Q
    ||||||||| |||||||   |||||       ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  55150949 tattattaggctttttttttatgtattttctgactatgatgatgatgatgtattattatgacattttcgtatttctatgtcatttacgtacgtacgtttt 55151048  T
Q  324 atattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatgaatt 423  Q
    ||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  55151049 atattatttcttgcgttttagttttaccattttcctattaaatattggatgaatatgtttaggtatcaattggttattagatgaacattttagatgaatt 55151148  T
Q  424 ttcaattgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  55151149 ttcaattggttattggatgaaaatcttagatgaatttgtttagataccaaag 55151200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 274 - 475
Target Start/End: Original strand, 12723 - 12924
Alignment:
Q  274 tattattatgacattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaattttaccattttcctgttaaatattggat 373  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  12723 tattattatgacatttttgtatttctatgacatttacgtacgtacgttttatattatttcttgcattttaattttaccattttcctgttaaatattggat 12822  T
Q  374 gaatatgtttaggtatcaattgattattagatgaaaattttagatgaattttcaattgattattggatgaaaatcttagatgaatttgtttaggtaccaa 473  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  12823 gaatatgtttaggtatcaattggttattagatgaaaattttagatgaattttcaattggtttttggatgaaaatctcagatgaatttgtttaggtaccaa 12922  T
Q  474 ag 475  Q
    ||    
T  12923 ag 12924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 32 - 242
Target Start/End: Complemental strand, 178027 - 177815
Alignment:
Q  32 gagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccagg 131  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  178027 gagatgcctgacacactgacgatcatctgagatgtggtgcatatagctgatgatattgtggccaggcaagccgagatgactaaagagaagattgtccagg 177928  T
Q  132 aggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgattatt 229  Q
    ||||||||||||||||  ||||| || ||||||||||||| ||||||||||| |||||||  |  |||| |||||| | |||||| ||||| |||||||     
T  177927 aggtgatgcggatagccggtactggtcgccctgcccttacgtatcagattgccaggcggcatagggggccgaggcatgctaggcaacagggttgattatg 177828  T
Q  230 attagactttttt 242  Q
    |||||||||||||    
T  177827 attagactttttt 177815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 52560990 - 52561204
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||||||||||| |||||||| |||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  52560990 ggaggagcatgccagggagatgtctgacacactgacaatcatccgggatgtggtgcatatagctgatgatattgtggccaggcaagccgagatgactaaa 52561089  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||||||||||||||||||||||||||||||  ||||| || ||||||||||||| || |||||||  ||||||||||  |||| |||||| | |||||    
T  52561090 gaggagattgtccaggaggtgatgcggatagccggtactggtcgccctgcccttacgtaacagattgtcaggcggcgcagggggccgaggcatgctaggc 52561189  T
Q  214 agcagggctgattat 228  Q
    || |||| |||||||    
T  52561190 agtagggttgattat 52561204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 18943211 - 18943000
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagatt 124  Q
    |||||| ||||||| ||||||| ||| |||||||  | |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  18943211 tgccagagagatgcttgacacactgatgatcatcctgtatgtggtgcatatacctgacgatattgtggccaggcaagccgagatgactaaagaggagatt 18943112  T
Q  125 gtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggct 222  Q
    |||||||||||||| ||||||||  ||||| || ||||||||||||| ||||| ||||| |||||| |||  |||  |||||| | |||||||||||| |    
T  18943111 gtccaggaggtgatacggatagccggtactggtcgccctgcccttacgtatcaaattgcgaggcggtgcagggggtcgaggcatgctaggcagcagggtt 18943012  T
Q  223 gattattattag 234  Q
    |||||| |||||    
T  18943011 gattatgattag 18943000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 27 - 349
Target Start/End: Original strand, 48164718 - 48165043
Alignment:
Q  27 ccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgt 126  Q
    |||| ||||||  ||||||| ||||||||||| | ||||||||||||||  |||| ||||||||| ||||| ||||||| |||||||||||||| |||||    
T  48164718 ccagagagatgtttgacacactgacgatcatccgagatgtggtgcatataactgatgatattgtgaccaggaaagccgagatgactaaagaggatattgt 48164817  T
Q  127 ccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctga 224  Q
    |||||||||||||||||||||  ||||| || ||||||||||||| ||||||||||  ||||||||||  |||  |||||| | |||||||||||| |||    
T  48164818 ccaggaggtgatgcggatagccggtactggtcgccctgcccttacgtatcagattgtcaggcggcgcagggggtcgaggcatgctaggcagcagggttga 48164917  T
Q  225 ttattattagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatg-acattttcgtatttctatgacatatacgtacgtacctttt 323  Q
    |||| |||||  |||||| |||||       ||| ||||||| || |||   | ||  | ||||||| |||||| |||||||| | |  || ||||||||    
T  48164918 ttatgattagggtttttttatgtacttttttactgtgatgataattatgacatgttccgtacattttggtatttgtatgacattttccgacatacctttt 48165017  T
Q  324 atattattgtttgcgttttaatttta 349  Q
    |||||||  |||||||||||||||||    
T  48165018 atattatcttttgcgttttaatttta 48165043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 9089 - 9224
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| || |    
T  9089 ggaggagcatgccagggaaatgcctgacacagtgacgatcatccgggatgtggtgcatattgctgatgatattgtggccaggcaagccgagatgagtaga 9188  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagt 151  Q
     |||||||||||||||||||||||||||||||||||    
T  9189 aaggagattgtccaggaggtgatgcggatagctagt 9224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 18908117 - 18908232
Alignment:
Q  32 gagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccagg 131  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  18908117 gagatgcctgacacactgatgatcatctgggatgtggtgcatatagctgacgatactgtggccaggcaagccgaaatgcctaaagaggagattgtccagg 18908216  T
Q  132 aggtgatgcggatagc 147  Q
    ||||||||||||||||    
T  18908217 aggtgatgcggatagc 18908232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 248
Target Start/End: Original strand, 45034586 - 45034808
Alignment:
Q  28 cagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtc 127  Q
    |||| |||||||||||||| || |||||||| |||| ||||||||||| ||||| |||||||||||||||||||| || |||||||| ||  ||||||||    
T  45034586 caggaagatgcctgacacactggcgatcatccgggaggtggtgcatatagctgatgatattgtggccaggcaagctgagatgactaatgaaaagattgtc 45034685  T
Q  128 caggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgat 225  Q
    |||||||||||||||||| |  |||||  | |||| |||||||| ||||| ||||| ||||||||||  |||| |||||| | |||||||||||| ||||    
T  45034686 caggaggtgatgcggatatccggtactgatcgccccgcccttacgtatcaaattgccaggcggcgcagggggccgaggcatgctaggcagcagggttgat 45034785  T
Q  226 tattattagacttttttaatgta 248  Q
    ||| |||||  |||||| |||||    
T  45034786 tatgattagggtttttttatgta 45034808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 145 - 277
Target Start/End: Original strand, 10809 - 10943
Alignment:
Q  145 agctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggcagcagggctgattattattagactttttt 242  Q
    ||||||| || || ||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  10809 agctagtgctggtcgccctgcccttacttatcagattgtcaggcggcgcagggggcagaggcagggtaggcagcagggctgattattattaggctttttt 10908  T
Q  243 aatgtannnnnnnactatgatgatgatgatgtatt 277  Q
     |||||       |||||||| |||||||||||||    
T  10909 tatgtattttttgactatgatcatgatgatgtatt 10943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 294
Target Start/End: Complemental strand, 13825651 - 13825388
Alignment:
Q  32 gagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccagg 131  Q
    ||||||||||||||| | ||||||||| ||||||| ||||| || |||||  || ||||||| | |   ||||| |||||||||| |||| | || ||||    
T  13825651 gagatgcctgacacacttacgatcatcagggatgtcgtgcagatagctgataatgttgtggctatgagtgccgagatgactaaagcggagctggtgcagg 13825552  T
Q  132 aggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgattatt 229  Q
    || ||||  |||| | |||||||||| ||||||||||||  |||| |||||| |||| |||||  ||||| |||||   ||||||| |||| |||||||     
T  13825551 agatgatttggattgatagtactagtcgccctgcccttatgtatcggattgccaggcagcgcagggggcataggcaccataggcagtagggttgattatc 13825452  T
Q  230 attagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatgacattttcgta 294  Q
    |||||  |||||| |||||       ||||||||||||||||||||||||||| |||||||||||    
T  13825451 attag-gtttttttatgtacagtttgactatgatgatgatgatgtattattattacattttcgta 13825388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 54315504 - 54315423
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccagg 97  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| ||||||||||||| || | |||  ||||||||||||||    
T  54315504 ggaggagcatgccagagagatgcctgacacattgacgatcatcagggatgtggtgcagatagatgataatattgtggccagg 54315423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 52561275 - 52561335
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaa 344  Q
    |||||||| |||||||||||||| | || |||||||||||||||||||  |||||||||||    
T  52561275 acattttcttatttctatgacattttcggacgtaccttttatattatttcttgcgttttaa 52561335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 54315263 - 54315207
Alignment:
Q  293 tatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||||||| || ||||||| ||||||||||||||||  ||||||||||||||||    
T  54315263 tatttctatgatatttacgtacataccttttatattatttcttgcgttttaatttta 54315207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 18911887 - 18911925
Alignment:
Q  159 gccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  18911887 gccctgcccttacatatcagattgccaggcggcgcaggg 18911925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 177770 - 177705
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||| ||||||||||||||| | |  ||  |||||||||||||||  ||||||||||||||||    
T  177770 acattttggtatttctatgacattttccgacacaccttttatattatttcttgcgttttaatttta 177705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 23585246 - 23585310
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||| ||||||||||||||| | | ||| ||||||| ||||||||  ||||||||||||||||    
T  23585246 acatttttgtatttctatgacattttcctacataccttt-atattatttcttgcgttttaatttta 23585310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 23600069 - 23600133
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    ||||||| ||||||||||||||| | | ||| ||||||| ||||||||  ||||||||||||||||    
T  23600069 acatttttgtatttctatgacattttcctacataccttt-atattatttcttgcgttttaatttta 23600133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 243; Significance: 1e-134; HSPs: 1)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 119 - 475
Target Start/End: Original strand, 5433 - 5790
Alignment:
Q  119 gagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg--cagaggcagggtaggcagc 216  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||    
T  5433 gagatcgtccaggaggtgatgcggatagctagtactagtcgccctgcccttacttattagattgctaggcggcgcagggggcagaggcaaggtaggcagc 5532  T
Q  217 agggctgattattattagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatgacattttcgtatttctatgacatatacgtacgt 316  Q
    |||||||||||||||||| |||||||| ||||       | |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  5533 agggctgattattattaggctttttta-tgtattttttgattatgatgatgatgatgtattattatgacattttcatatttctatgacatttacgtacgt 5631  T
Q  317 accttttatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttag 416  Q
       ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  5632 ttgttttatattatttcttgcgttttaattttaccattttcctattaaatattggatgaatatgtttaggtatcaattggttattagatgaacattttag 5731  T
Q  417 atgaattttcaattgattattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  5732 atgaattttcaataggttattggatgaaaatcttagatgaatttgtttagataccaaag 5790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 5e-88; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 32 - 424
Target Start/End: Original strand, 33523353 - 33523759
Alignment:
Q  32 gagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccagg 131  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||  |||| ||||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  33523353 gagatgtctgacacactgacgatcatccgggatgtggtgcatataactgatgatattgtggccaggaaagacgagatgactaaggaggagattgtccagg 33523452  T
Q  132 aggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgattatt 229  Q
    ||||||| || ||||| |||||| |  ||||||||||||| ||||||||||||||||||||||  |||||| |||||||||| ||| |||| |||||||     
T  33523453 aggtgatacgaatagccagtactggccgccctgcccttacatatcagattgctaggcggcgcagggggcagcggcagggtagacagtagggttgattatg 33523552  T
Q  230 attagacttttttaatgtannnnnnnactatgatgatgatgatgtattattatg-----------acattttcgtatttctatgacatatacgtacgtac 318  Q
    ||||| ||||||| |||||       |||||||| ||| |||||||| ||||||           ||||||||||||||||||||||| | |  || |||    
T  33523553 attaggctttttttatgtacttttggactatgattatggtgatgtataattatgacatgttccgtacattttcgtatttctatgacattttccgacatac 33523652  T
Q  319 cttttatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaa-attttaga 417  Q
    |||||||||||||  || ||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||    
T  33523653 cttttatattatttcttacgttttaattttatcttgttcctgttaaatattggatgaatttgtttaggtatcaattggttattagatgaaattttttaga 33523752  T
Q  418 tgaattt 424  Q
    |||||||    
T  33523753 tgaattt 33523759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 40 - 424
Target Start/End: Complemental strand, 19268951 - 19268547
Alignment:
Q  40 tgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagattgtccaggaggtgatg 139  Q
    ||||||| ||||||||||||| |||||||||||||| ||||| ||||||||||| ||| | | ||| |||| |||||||||||||||||| ||||||||     
T  19268951 tgacacactgacgatcatctgagatgtggtgcatatagctgatgatattgtggcaaggaacgacgagatgattaaagaggagattgtccaagaggtgatt 19268852  T
Q  140 cggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggcagcagggctgattattattagac- 236  Q
    | |||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||  ||||||||||| |||||||||||||| ||||| | ||||| |     
T  19268851 cagatagccagtactggtcgccctgcccatacgtatcagattgccaggcggcgcagggggcagaggcatggtaggcagcagggttgattctgattaggct 19268752  T
Q  237 -ttttttaatgtannnnnnnactatgatgatgatgatgtattattatg-----------acattttcgtatttctatgacatatacgtacgtacctttta 324  Q
     |||||| |||||       |||||||||||| |||||||| ||||||           ||||||||||||||||||||||| | || | ||||||||||    
T  19268751 ttttttttatgtattttttgactatgatgatggtgatgtataattatgacatgttccgtacattttcgtatttctatgacattttcggatgtacctttta 19268652  T
Q  325 tattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaa-----ttgattattagatgaaaattttagatg 419  Q
    |||||||  |||||||||||||||| | | |||||||||||||||||||| || |||||| |||||||     ||| ||||| |||||||||||||||||    
T  19268651 tattatttcttgcgttttaattttatcttgttcctgttaaatattggatgcatttgtttatgtatcaaaggatttggttattggatgaaaattttagatg 19268552  T
Q  420 aattt 424  Q
    |||||    
T  19268551 aattt 19268547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 5620229 - 5620448
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagatt 124  Q
    |||||| || |||||||||||| ||| ||||||| | |||||||||||||| | |||||||||||||| ||| |||||||| ||||||||||| ||||||    
T  5620229 tgccagagatatgcctgacacactgatgatcatccgagatgtggtgcatatagttgacgatattgtggacagacaagccgagatgactaaagaagagatt 5620328  T
Q  125 gtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcagg--gcagaggcagggtaggcagcagggct 222  Q
    |||||||||||||||||||||||   ||||||| ||||||||||||| ||||||||||| ||||||||||||  || |||||| | |||||||||||| |    
T  5620329 gtccaggaggtgatgcggatagccgatactagtcgccctgcccttacgtatcagattgccaggcggcgcagggagccgaggcatgctaggcagcagggtt 5620428  T
Q  223 gattattattagactttttt 242  Q
    |||||| ||||| |||||||    
T  5620429 gattatgattaggctttttt 5620448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 2946146 - 2946241
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagagga 120  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||    
T  2946146 tgccagggagatgcctgacacactgacaatcatccgggatgtggtgcatatagttgatgatattgtggccaggcaagccgagatgactaaagagga 2946241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 321 - 469
Target Start/End: Complemental strand, 2435073 - 2434916
Alignment:
Q  321 tttatattattgtttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaattttagatga 420  Q
    |||||||||||  ||| |||||||||||| | | ||| ||||||||||||||||||| ||||||||||||| ||| | ||| ||||||||||||||||||    
T  2435073 tttatattatttattgtgttttaattttatcttgttcgtgttaaatattggatgaatttgtttaggtatcatttggtaattggatgaaaattttagatga 2434974  T
Q  421 attt---------tcaattgattattggatgaaaatcttagatgaatttgtttaggta 469  Q
    ||||         ||| ||| | ||||||||||||| |||||||||||||||||||||    
T  2434973 atttgtttaggtatcatttggtaattggatgaaaattttagatgaatttgtttaggta 2434916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 33522526 - 33522380
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagatt 124  Q
    |||||| || ||| |||||||||||| ||||||| | |||||||||||||| ||||| |||||||| |||||  | |||||   ||||||| ||||||||    
T  33522526 tgccagagatatgtctgacacattgaagatcatccgagatgtggtgcatatagctgatgatattgttgccagaaaggccgacgggactaaaaaggagatt 33522427  T
Q  125 gtccaggaggtgatgcggatagctagtactagtggccctgcccttac 171  Q
     |||||||||| ||||| ||||   |||||||| ||| |||||||||    
T  33522426 ttccaggaggttatgcgaatagtcggtactagtcgccttgcccttac 33522380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 424
Target Start/End: Complemental strand, 33522246 - 33522155
Alignment:
Q  334 ttgcgttttaattttaccattttcctgttaaatattggatgaatatgtttaggtatcaattgattattagatgaaaa-ttttagatgaattt 424  Q
    ||||| |||||||||| | | |||||||| |||||||||||||| |||||| |||||||||| ||||| |||||||| ||||||||||||||    
T  33522246 ttgcgatttaattttatcttgttcctgttgaatattggatgaatttgtttaagtatcaattggttattggatgaaaatttttagatgaattt 33522155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 33522191 - 33522140
Alignment:
Q  425 tcaattgattattggatgaaaatctt-agatgaatttgtttaggtaccaaag 475  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  33522191 tcaattggttattggatgaaaatttttagatgaatttgtttaggtatcaaag 33522140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 433 - 475
Target Start/End: Complemental strand, 19268574 - 19268532
Alignment:
Q  433 ttattggatgaaaatcttagatgaatttgtttaggtaccaaag 475  Q
    ||||||||||||||| |||||||||||||||||| || |||||    
T  19268574 ttattggatgaaaattttagatgaatttgtttagttatcaaag 19268532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 8e-56; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 54602770 - 54602557
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||    
T  54602770 ggaggagcatgccagagagatgcctgacacactgacgatcatccgggatgtggtgcatatagctgacgatattgtggttaggcaagccgagatgactaaa 54602671  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||| ||||||||||||||||||| ||| | | ||||| || ||||||||||||| ||| ||||||| ||||||||||  |||| |||||| | |||||    
T  54602670 gaggaaattgtccaggaggtgatgcagattgttggtactggtcgccctgcccttacgtattagattgccaggcggcgcagggggccgaggcatgctaggc 54602571  T
Q  214 agcagggctgatta 227  Q
    ||||||| ||||||    
T  54602570 agcagggttgatta 54602557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 12025096 - 12024924
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaagaggagatt 124  Q
    |||||| |||||| ||| |||| ||| ||||||| | |||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  12025096 tgccagagagatgtctggcacactgatgatcatccgagatgtggtgcatatagatgacgatattgtggccaggaaagccgagatgactaaagaggagatt 12024997  T
Q  125 gtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgcaggg 197  Q
    ||||||||||||||||||||| |  ||||| || ||||||||||||| ||||||||| | ||||||| |||||    
T  12024996 gtccaggaggtgatgcggatacccggtactggtcgccctgcccttacgtatcagattaccaggcggcacaggg 12024924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 39389032 - 39388804
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| ||||||  ||||||| ||||||||||| |||||||||| |||||  |||| |||||||||| |||||||||||  |||||||||    
T  39389032 ggaggagcatgccagtgagatgtatgacacactgacgatcatccgggatgtggtacatataactgatgatattgtggtcaggcaagccgggatgactaaa 39388933  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    ||||||||||| ||||||||||||||||||||  ||||| || |||||| |||||| ||||||||||| ||| |||| |  ||||  ||||| | |||||    
T  39388932 gaggagattgttcaggaggtgatgcggatagccggtactggtcgccctgaccttacgtatcagattgccaggtggcgtagggggctaaggcatgctaggc 39388833  T
Q  214 agcagggctgattattattagactttttt 242  Q
    || |||| ||||||| ||||| |||||||    
T  39388832 agtagggttgattatgattaggctttttt 39388804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 16347295 - 16347123
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| |||||| |||||||| ||||||||||| || || ||||||| || ||||| |||||||||||||||   | ||| |||||||||    
T  16347295 ggaggagcatgccagagagatgtctgacacactgacgatcatccggaatatggtgcagatagctgatgatattgtggccaggagcggcgagatgactaaa 16347196  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggc 188  Q
    ||||||||||| |||||||||||  |||| |  | |||| || ||| ||||||||| |||| |||||| ||||    
T  16347195 gaggagattgttcaggaggtgatttggattggcactactggtcgccttgcccttacatatcggattgccaggc 16347123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 39388746 - 39388686
Alignment:
Q  284 acattttcgtatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaa 344  Q
    |||||||| |||||||||||||| | || |||||||||||||||||||  |||||||||||    
T  39388746 acattttcttatttctatgacattttcggacgtaccttttatattatttcttgcgttttaa 39388686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1043 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold1043
Description:

Target: scaffold1043; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 3187 - 2959
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| |||||| |||||||| | ||| ||||||| |||||||||||||| ||||| |||||||| ||||||||| |||| |||||||||    
T  3187 ggaggagcatgccagagagatgtctgacacactaacggtcatctgagatgtggtgcatatagctgatgatattgtagccaggcaaaccgagatgactaaa 3088  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggcggcgca--gggcagaggcagggtaggc 213  Q
    |||||||||||||||||||||||||||||| |  ||||| || ||||||||||||| ||||||||||| ||||||||||  |||| |||||  | |||||    
T  3087 gaggagattgtccaggaggtgatgcggatatccggtactggtcgccctgcccttacgtatcagattgccaggcggcgcagggggccgaggcgtgctaggc 2988  T
Q  214 agcagggctgattattattagactttttt 242  Q
    | ||||| ||||||| ||||| |||||||    
T  2987 aacagggttgattatgattaggctttttt 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 45566 - 45738
Alignment:
Q  16 ggagaagcctgccagggagatgcctgacacattgacgatcatctgggatgtggtgcatattgctgacgatattgtggccaggcaagccgaaatgactaaa 115  Q
    |||| ||| |||||| |||||| |||||||| ||||||||||| || || ||||||| || ||||| |||||||||||||||   | ||| |||||||||    
T  45566 ggaggagcatgccagagagatgtctgacacactgacgatcatccggaatatggtgcagatagctgatgatattgtggccaggagcggcgagatgactaaa 45665  T
Q  116 gaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattgctaggc 188  Q
    ||||||||||| |||||||||||  |||| |  | |||| || ||| ||||||||| |||| |||||| ||||    
T  45666 gaggagattgttcaggaggtgatttggattggcactactggtcgccttgcccttacatatcggattgccaggc 45738  T

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Target: scaffold0097 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 29521 - 29577
Alignment:
Q  293 tatttctatgacatatacgtacgtaccttttatattattgtttgcgttttaatttta 349  Q
    |||||||||||||| ||||||||||||||||||||||||  ||| |||||| |||||    
T  29521 tatttctatgacatttacgtacgtaccttttatattatttcttgtgttttattttta 29577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 29317 - 29398
Alignment:
Q  101 gccgaaatgactaaagaggagattgtccaggaggtgatgcggatagctagtactagtggccctgcccttacttatcagattg 182  Q
    ||||| ||||||||||||||| | || |||||| |||| ||||| |  |||||| || ||||||||||||  ||||||||||    
T  29317 gccgagatgactaaagaggagctcgtgcaggagatgatccggattggcagtactggtcgccctgcccttatgtatcagattg 29398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 62956 - 62909
Alignment:
Q  25 tgccagggagatgcctgacacattgacgatcatctgggatgtggtgca 72  Q
    |||||| |||||||||||||||||||||||||||  |||||| |||||    
T  62956 tgccagagagatgcctgacacattgacgatcatcaaggatgtcgtgca 62909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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