View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20721_low_54 (Length: 247)

Name: NF20721_low_54
Description: NF20721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20721_low_54
NF20721_low_54
[»] chr7 (2 HSPs)
chr7 (20-233)||(48521376-48521590)
chr7 (22-233)||(39440614-39440824)
[»] chr1 (2 HSPs)
chr1 (22-195)||(19192691-19192863)
chr1 (22-194)||(44199844-44200015)
[»] scaffold0557 (2 HSPs)
scaffold0557 (42-233)||(7471-7662)
scaffold0557 (22-130)||(7333-7444)
[»] chr6 (5 HSPs)
chr6 (42-233)||(14464502-14464693)
chr6 (22-130)||(18716168-18716278)
chr6 (22-130)||(15906147-15906257)
chr6 (53-194)||(18716300-18716439)
chr6 (73-130)||(14464418-14464475)
[»] chr4 (3 HSPs)
chr4 (42-195)||(19110984-19111137)
chr4 (22-130)||(19111164-19111274)
chr4 (144-182)||(8364635-8364673)
[»] chr2 (2 HSPs)
chr2 (22-130)||(29467807-29467917)
chr2 (42-233)||(29467589-29467780)
[»] scaffold0726 (2 HSPs)
scaffold0726 (42-233)||(4690-4881)
scaffold0726 (22-130)||(4908-5018)
[»] chr5 (1 HSPs)
chr5 (22-130)||(42882125-42882236)
[»] chr8 (3 HSPs)
chr8 (22-130)||(7964014-7964124)
chr8 (22-130)||(8224625-8224737)
chr8 (53-233)||(7963759-7963937)
[»] scaffold0683 (1 HSPs)
scaffold0683 (22-175)||(7478-7630)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 48521376 - 48521590
Alignment:
Q  20 gtaaataggatattcaagatccaaaagcatagcatatacttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  48521376 gtaaataggatattcaagatccaaaagcatagcatatacttgcttttaatatgattccaaaatatcaatgtgaatctgtaagtatcatttacaaagcata 48521475  T
Q  120 atgactttt-aattttttcttcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaatt 218  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48521476 atgacttttaaatttttttttcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaatt 48521575  T
Q  219 taacagaagaataat 233  Q
    |||||||||||||||    
T  48521576 taacagaagaataat 48521590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 39440614 - 39440824
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagcatat--acttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  |||||||||| ||||  ||||||| |||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  39440614 aaataggatattcaagataaaaaagcatagtatatatacttgctcttaagatgattccaaaatttgaatgtgaacttgtaagtatcatttacaaagcata 39440713  T
Q  120 atgacttttaattttttcttcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaattt 219  Q
     |||||||||| | |   |  |||||||||||| ||||||||||| |||| ||||||||||||||||| |||||||  ||  || |||| ||||  ||||    
T  39440714 gtgacttttaaatat---tatttctaagaataatacaaacatcttgcatcgtgttattgtgttgaccacttgaaaccgtgtaagaaacatacttagattt 39440810  T
Q  220 aacagaagaataat 233  Q
    |||| |||||||||    
T  39440811 aacaaaagaataat 39440824  T

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Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 19192863 - 19192691
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  ||||| |||| |||||  |||||| || | ||||||||| ||| ||||||||||  ||||||||||||||||||||||||    
T  19192863 aaataggatattcaagataaaaaagtatagtatatatacttgctctttagatgattccataatttgaatgtgaacttgtaagtatcatttacaaagcata 19192764  T
Q  120 atgacttttaattttttcttcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaac 195  Q
     |||||||||| | |   |  |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||    
T  19192763 gtgacttttaaatat---tatttctaagaataatacaaacatcttacatcgtgttattgtgttgaccacttgaaac 19192691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 44200015 - 44199844
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    |||||||||||| |||||  |||||||||  |||||  |||||| |||| ||||||||| ||| ||||||| ||  ||||||||||||||||||||||||    
T  44200015 aaataggatattaaagataaaaaagcataatatatatacttgctcttaagatgattccataatttgaatgtaaacttgtaagtatcatttacaaagcata 44199916  T
Q  120 atgacttttaattttttcttcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaa 194  Q
     |||||||||| | |   |  |||||||||||| |||||||||||  ||| ||||||||||||||||| ||||||    
T  44199915 gtgacttttaaatat---tatttctaagaataatacaaacatcttgtatcgtgttattgtgttgaccacttgaaa 44199844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 233
Target Start/End: Original strand, 7471 - 7662
Alignment:
Q  42 aaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcattt-acaaagcataatgacttttaattttttct 138  Q
    ||||||||||||||||  |||||| |||| ||||||||||||| | ||||||||  |||||||||||||| |||||||||| |||||||||| | ||  |    
T  7471 aaaagcatagcatatatacttgctattaaaatgattccaaaattttaatgtgaacttgtaagtatcattttacaaagcatattgacttttaaatattatt 7570  T
Q  139 tcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaatttaacagaagaataat 233  Q
    | |   |||||||| ||||||||||| |||||||||||||||||||||| |||||||  ||  ||||||| ||||  ||||||||||||| ||||    
T  7571 ttt---aagaataatacaaacatcttgcatcatgttattgtgttgaccacttgaaaccgtgtaaggaacatacttagatttaacagaagattaat 7662  T

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Target: scaffold0557; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 7333 - 7444
Alignment:
Q  22 aaataggatattcaagatccaaaa-gcatagcatat--acttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcat 118  Q
    ||||||||||||||||||  |||| |||||| ||||  ||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  7333 aaataggatattcaagatgaaaaaagcatagtatatatacttgctcttaagatgattccaaaatttgaatgtgaatttgtaagtatcatttacaaagcat 7432  T
Q  119 aatgacttttaa 130  Q
    | ||||||||||    
T  7433 attgacttttaa 7444  T

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Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 233
Target Start/End: Original strand, 14464502 - 14464693
Alignment:
Q  42 aaaagcatagcatat--acttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatca-tttacaaagcataatgacttttaattttttct 138  Q
    |||||||||||||||  ||||||| |||| ||||||||||||| | ||||||||  ||||||||||| ||||||||||||| |||||||||| | |   |    
T  14464502 aaaagcatagcatatatacttgctcttaaaatgattccaaaattttaatgtgaacttgtaagtatcattttacaaagcatattgacttttaaatat---t 14464598  T
Q  139 tcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaatttaacagaagaataat 233  Q
      || ||||||||| ||||||||||| |||||||||| ||||||||||| |||||||  ||  ||||||| ||||  ||||||||||||| ||||    
T  14464599 atttttaagaataatacaaacatcttgcatcatgttactgtgttgaccacttgaaaccgtgtaaggaacatacttagatttaacagaagattaat 14464693  T

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Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 18716168 - 18716278
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagcatat--acttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  |||||||||| ||||  ||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  18716168 aaataggatattcaagataaaaaagcatagtatatatacttgctcttaagatgattccaaaatttgaatgtgaatttgtaagtatcatttacaaagcata 18716267  T
Q  120 atgacttttaa 130  Q
     |||| |||||    
T  18716268 ttgacatttaa 18716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 15906257 - 15906147
Alignment:
Q  22 aaataggatattcaagatccaaaagcatag--catatacttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  |||| || ||   ||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15906257 aaataggatattcaagataaaaaaacaaagtatatatacttgctcttaagatgattccaaaatttgaatgtgaatttgtaagtatcatttacaaagcata 15906158  T
Q  120 atgacttttaa 130  Q
     ||||||||||    
T  15906157 ttgacttttaa 15906147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 18716300 - 18716439
Alignment:
Q  53 atatacttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatca-tttacaaagcataatgacttttaattttttcttcttctaagaata 151  Q
    ||||||||||| |||| ||||||||||||| | ||||| ||  ||||||||||| ||||||||||||| |||||||||| | |   |  || ||||||||    
T  18716300 atatacttgctcttaaaatgattccaaaattttaatgtaaacttgtaagtatcattttacaaagcatattgacttttaaatat---tatttttaagaata 18716396  T
Q  152 agacaaacatcttacatcatgttattgtgttgaccaattgaaa 194  Q
    | |||||||| || |||||||||| ||||||||||| ||||||    
T  18716397 atacaaacatattgcatcatgttaatgtgttgaccacttgaaa 18716439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 14464418 - 14464475
Alignment:
Q  73 attccaaaatatgaatgtgaatatgtaagtatcatttacaaagcataatgacttttaa 130  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  14464418 attccaaaatttgaatgtgaatttgtaagtatcatttacaaagcatattgacttttaa 14464475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 19111137 - 19110984
Alignment:
Q  42 aaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatca-tttacaaagcataatgacttttaattttttct 138  Q
    ||||||||||||||||  |||||| |||| ||||||||||||| | ||||||||  ||||||||||| ||||||||||||| |||||||||| | |   |    
T  19111137 aaaagcatagcatatatacttgctcttaaaatgattccaaaattttaatgtgaacttgtaagtatcattttacaaagcatattgacttttaaatat---t 19111041  T
Q  139 tcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaac 195  Q
      || ||||||||| ||||||||||| |||||||||||||||||||||| |||||||    
T  19111040 atttttaagaataatacaaacatcttgcatcatgttattgtgttgaccacttgaaac 19110984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 19111274 - 19111164
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  |||||||||  |||||  |||||| |||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  19111274 aaataggatattcaagataaaaaagcatattatatatacttgctcttaagatgatttcaaaatttgaatgtgaatttgtaagtatcatttacaaagcata 19111175  T
Q  120 atgacttttaa 130  Q
     ||||||||||    
T  19111174 ttgacttttaa 19111164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 8364673 - 8364635
Alignment:
Q  144 taagaataagacaaacatcttacatcatgttattgtgtt 182  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  8364673 taagaataatacaaacatcttacattatgttattgtgtt 8364635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 29467917 - 29467807
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  |||||||||| |||||  |||||| |||  ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  29467917 aaataggatattcaagataaaaaagcatagtatatatacttgctcttatgatgattccaaaatttgaatgtgaatttgtaagtatcatttacaaagcata 29467818  T
Q  120 atgacttttaa 130  Q
     ||||||||||    
T  29467817 ttgacttttaa 29467807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 29467780 - 29467589
Alignment:
Q  42 aaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatca-tttacaaagcataatgacttttaattttttct 138  Q
    ||||||||||||||||  ||||||  ||| ||||||||||||| | ||||||||  ||||||||||| ||||||||||||| |||||||||| | |   |    
T  29467780 aaaagcatagcatatatacttgctcataaaatgattccaaaattttaatgtgaacttgtaagtatcattttacaaagcatattgacttttaaatat---t 29467684  T
Q  139 tcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaatttaacagaagaataat 233  Q
      || ||||||||| ||||  ||||| ||| |||||||||||||||||| |||||||  ||  || |||| ||||  ||||||||||||| ||||    
T  29467683 atttttaagaataatacaacaatcttgcattatgttattgtgttgaccacttgaaaccgtgtaagaaacatacttagatttaacagaagattaat 29467589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0726 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 4881 - 4690
Alignment:
Q  42 aaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcattt-acaaagcataatgacttttaattttttct 138  Q
    ||||||||||||||||  |||| | |||| ||||||||||||| | ||||||||  |||||||||||||| |||||||||| |||||||||| | ||  |    
T  4881 aaaagcatagcatatatacttggtcttaaaatgattccaaaattttaatgtgaacttgtaagtatcattttacaaagcatattgacttttaaatattatt 4782  T
Q  139 tcttctaagaataagacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaatttaacagaagaataat 233  Q
    | |   |||||||| ||||||||||| |||||||||| ||||||||||| |||||||  ||  ||||||| ||||  ||||||||||||| ||||    
T  4781 ttt---aagaataatacaaacatcttgcatcatgttaatgtgttgaccacttgaaaccgtgtaaggaacatacttagatttaacagaagattaat 4690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0726; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 5018 - 4908
Alignment:
Q  22 aaataggatattcaagatccaaaagcatag--catatacttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  |||| || ||   ||||||||||| |||| ||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  5018 aaataggatattcaagataaaaaaacaaagtatatatacttgctcttaagatgattccaaaatttgaatgtgaatttataagtatcatttacaaagcata 4919  T
Q  120 atgacttttaa 130  Q
     ||||||||||    
T  4918 ttgacttttaa 4908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 42882236 - 42882125
Alignment:
Q  22 aaataggatattcaagatccaaaa-gcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcat 118  Q
    ||||||||||||||||||  |||| ||||||||||||  |||||| |||| |||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  42882236 aaataggatattcaagataaaaaaagcatagcatatatacttgctcttaagatgatttcaaaatttgaatgtgaatttgtaagtatcatttacaaagcat 42882137  T
Q  119 aatgacttttaa 130  Q
    | ||||||||||    
T  42882136 attgacttttaa 42882125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 7964124 - 7964014
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagcatata--cttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    |||||||||| |||||||  |||||||||| |||||  |||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||    
T  7964124 aaataggatagtcaagataaaaaagcatagtatatatacttgctcttaagatgattccaaaatttgaatgtgaatttgtaagtatcatttacaaagaata 7964025  T
Q  120 atgacttttaa 130  Q
     ||||||||||    
T  7964024 ttgacttttaa 7964014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 8224625 - 8224737
Alignment:
Q  22 aaataggatattcaagat--ccaaaagcatag--catatacttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagca 117  Q
    ||||||||||||||||||    ||||||||||   |||||||| || |||| |||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  8224625 aaataggatattcaagataaaaaaaagcatagtatatatacttactcttaagatgatttcaaaatttgaatgtgaatttgtaagtatcatttacaaagca 8224724  T
Q  118 taatgacttttaa 130  Q
    || ||||||||||    
T  8224725 tattgacttttaa 8224737  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 233
Target Start/End: Complemental strand, 7963937 - 7963759
Alignment:
Q  53 atatacttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatca-tttacaaagcataatgacttttaattttttcttcttctaagaata 151  Q
    ||||||||||| |||| ||||||| ||||| | ||||||||    ||||||||| ||||||||||||| |||||||||| | |   |  || ||||||||    
T  7963937 atatacttgctcttaaaatgattctaaaattttaatgtgaactgttaagtatcattttacaaagcatattgacttttaaatat---tatttttaagaata 7963841  T
Q  152 agacaaacatcttacatcatgttattgtgttgaccaattgaaacgatgctaggaacaaacttcaatttaacagaagaataat 233  Q
      ||||||||||| |||| ||||||||||||||||| |||| ||  ||  ||||| | ||||  ||||||||||||| ||||    
T  7963840 gtacaaacatcttgcatcgtgttattgtgttgaccacttgacaccgtgtaaggaaaatacttagatttaacagaagattaat 7963759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 7630 - 7478
Alignment:
Q  22 aaataggatattcaagatccaaaagcatagc--atatacttgcttttaatatgattccaaaatatgaatgtgaatatgtaagtatcatttacaaagcata 119  Q
    ||||||||||||||||||  ||||||||||   ||||||||||| |||| ||||||| | ||| |||| |||||  ||||||||||||||||||||||||    
T  7630 aaataggatattcaagataaaaaagcatagtctatatacttgctcttaagatgattctagaatttgaacgtgaacttgtaagtatcatttacaaagcata 7531  T
Q  120 atgacttttaattttttcttcttctaagaataagacaaacatcttacatcatgtta 175  Q
     ||| |||||| | |   |  |||||||||||| ||||||||||| |||| |||||    
T  7530 gtgatttttaaatat---tatttctaagaataatacaaacatcttgcatcgtgtta 7478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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