View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20721_low_64 (Length: 201)
Name: NF20721_low_64
Description: NF20721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20721_low_64 |
 | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
| [»] scaffold0133 (2 HSPs) |
| | |
|
| [»] scaffold0144 (1 HSPs) |
| | |
|
| [»] scaffold0511 (1 HSPs) |
| | |
|
| [»] scaffold0230 (1 HSPs) |
| | |
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Alignment Details
Target: scaffold0256 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 9822 - 9982
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| | ||||||||| |||| | ||||| | |||||||||||||| |||||||||||||||||||| |
|
|
| T |
9822 |
gacgagccaaaatcttcataggatggaaacgagtgatccgcttgttgtcgccatgtgcttttaaggttattgaacattcatccaatatatcatcaagcac |
9921 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9922 |
ataagcagcatcacgcagttgctgtagccactctttgacagcatcgtttgttatttgcttc |
9982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 16781777 - 16781937
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| | ||||||||| |||| | ||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16781777 |
gacgagccaaaatcttcataggatggaaacgagtgatccgcttgttgtcgccatgtgcttttaaggttattgaacattcgtccaatatatcatcaagcac |
16781876 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|||||||||||||| |||| ||| | |||||||||||||||||| ||||||||||||||| |
|
|
| T |
16781877 |
ataagcagcatcacgcagttgctgtaaccactctttcacagcatcatttgttatttgcttc |
16781937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 17070184 - 17070341
Alignment:
| Q |
28 |
gagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcacata |
127 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| || ||| | ||||||| |||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
17070184 |
gagccaaaatcttcattggatggaaacgggtgatgcacttgttgccttcatgtgcttttgaagttattgaacattcatccaatatatcatcaagtacata |
17070283 |
T |
|
| Q |
128 |
agcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|||||||||||| | |||||||||||| | ||||||| ||||| ||||||| |||||| |
|
|
| T |
17070284 |
agcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc |
17070341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 16838356 - 16838516
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| || ||| | ||||||| |||||||||||||| ||||||||||||||||| || |
|
|
| T |
16838356 |
gacgagccaaaatcttcattggatggaaacgggtgatgcacttgttgccttcatgtgcttttgaagttattgaacattcatccaatatatcatcaagtac |
16838455 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
||||||||||||||| | |||||||||||| | ||||||| ||| | ||||||| |||||| |
|
|
| T |
16838456 |
ataagcagcatcacccaatttctgcagccattgtttcacaacattgcttgttatctgcttc |
16838516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 16867491 - 16867331
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||| || |
|
|
| T |
16867491 |
gacgagccaaaatcttcataggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattcatccaatatatcatcaagtac |
16867392 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| | |||||| ||||||||||||||||||| |
|
|
| T |
16867391 |
ataagcagcgtcacccagtttttgcagccagttcctcacaggatcgtttgttatttgcttc |
16867331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 16658684 - 16658844
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||||||||| |||||| | ||||||| |||||||||||||| ||||||||||||||||| || |
|
|
| T |
16658684 |
gacgagccaaaatcttcataggatgaaaactagtgatgcacttgttgcctccatgtgcttttgaagttattgaacattcatccaatatatcatcaagtac |
16658783 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| | ||||| ||||||||||||||||||| |
|
|
| T |
16658784 |
ataagcagcgtcacccagtttttgcagccagttcctcacaagatcgtttgttatttgcttc |
16658844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 16797844 - 16798004
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||||||||||||||||||| || ||| | ||||||| |||||||||||||| ||||||||||||||||| || |
|
|
| T |
16797844 |
gacgagccaaaattttcattggatgaaaacgggtgatgcacttgttgccttcatgtgcttttgaagttattgaacattcatccaatatatcatcaagtac |
16797943 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
||||||||||||||| | |||||||||||| | || |||| ||||| ||||||| |||||| |
|
|
| T |
16797944 |
ataagcagcatcacccaatttctgcagccatttttgcacaacatcgcttgttatctgcttc |
16798004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 16788643 - 16788752
Alignment:
| Q |
28 |
gagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcacata |
127 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
16788643 |
gagccaaaatcttcttaggaaggaaacgggtgatgcacttgttgtctccatgtgcttttgatgttattgaacattcgtccaataaatcatcaagaacatg |
16788742 |
T |
|
| Q |
128 |
agcagcatca |
137 |
Q |
| |
|
|||||||||| |
|
|
| T |
16788743 |
agcagcatca |
16788752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 18872670 - 18872510
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||| ||| || ||||||||||||||||| || |
|
|
| T |
18872670 |
gacgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatcatccaatatatcatcaagaac |
18872571 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
||| ||| ||||| || ||||||||||| ||||||||| || | |||||| ||||||| |
|
|
| T |
18872570 |
ataggcaacatcagtcagcttctgcagccaatctttcacaacacggcttgttagttgcttc |
18872510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 18794106 - 18793947
Alignment:
| Q |
26 |
acgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcaca |
125 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||| ||| || ||||||||||||||||| ||| |
|
|
| T |
18794106 |
acgagccaaaatcttcttaggatgtaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatcatccaatatatcatcaagaaca |
18794007 |
T |
|
| Q |
126 |
taagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|| ||| ||||| || ||||||||||| ||||||||| || | |||||||||||||| |
|
|
| T |
18794006 |
taggcaacatcagttagcttctgcagccaatctttcacaacacggcttgttatttgcttc |
18793947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 18587187 - 18587028
Alignment:
| Q |
26 |
acgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcaca |
125 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||| |||||||||||||||| | |||||||| |||||| ||| || ||||||||||| ||||| ||| |
|
|
| T |
18587187 |
acgagccaaaatcatcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgattttattgtacaatcatccaatatatcgtcaagaaca |
18587088 |
T |
|
| Q |
126 |
taagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|||||| ||||| || ||||||||||| ||||||||| || | |||||||||||||| |
|
|
| T |
18587087 |
taagcaacatcagtcagcttctgcagccaatctttcacaacacggcttgttatttgcttc |
18587028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 18870192 - 18870033
Alignment:
| Q |
26 |
acgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcaca |
125 |
Q |
| |
|
||||||||||||| || |||||||||||| |||||| |||||||||||||||| | |||||||| |||||| ||| || ||||||||||||||||| ||| |
|
|
| T |
18870192 |
acgagccaaaatcatcttaggatggaaactggtgatccacttgttgtctccatgtgcttttgattttattgtacaatcatccaatatatcatcaagaaca |
18870093 |
T |
|
| Q |
126 |
taagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|||||| ||||| || ||||||||||| ||||||||| || | | |||||||||||| |
|
|
| T |
18870092 |
taagcaacatcagtcagcttctgcagccaatctttcacaacacggctcgttatttgcttc |
18870033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 16988165 - 16988283
Alignment:
| Q |
67 |
tgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcacataagcagcatcaccaagtttctgcagccactctttcacagc |
166 |
Q |
| |
|
|||||||||||| | ||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||| | |
|
|
| T |
16988165 |
tgttgtctccatgtgcttttgaggttattgagcattcatccaatatatcatcaagtacataagcagcatcagacagtttctgcagccattgtttcacaac |
16988264 |
T |
|
| Q |
167 |
atcgtttgttatttgcttc |
185 |
Q |
| |
|
|| | |||||||||||||| |
|
|
| T |
16988265 |
attgcttgttatttgcttc |
16988283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 18805676 - 18805589
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatat |
112 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||| ||| || |||||||| |
|
|
| T |
18805676 |
gacgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatcatccaatat |
18805589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 97; Significance: 7e-48; HSPs: 2)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 9179 - 9339
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||| | |||||||| |||| | ||||| | |||||||||||||| |||||||||||||||||||| |
|
|
| T |
9179 |
gacgaaccaaaatcttcataggatggaaacgagtgatccgcttgttgttaccatgtgcttttaaggttattgaacattcatccaatatatcatcaagcac |
9278 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9279 |
ataagcagcatcacgcagttgctgtagccactctttgacagcatcgtttgttatttgcttc |
9339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 13527 - 13687
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| | ||||||||| |||| | || || | |||||||||||||| |||||||||||||||| ||| |
|
|
| T |
13527 |
gacgagccaaaatcttcataggatggaaacgagtgatccgcttgttgtcgccatgtgctcttaaggttattgaacattcatccaatatatcatcaatcac |
13626 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
13627 |
ataagcagcatcaatcagttgctgtagccactctttgacagcatcgtttgttatttgcttc |
13687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 7052744 - 7052585
Alignment:
| Q |
27 |
cgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcacat |
126 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7052744 |
cgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccacagggttttgatgttattgaacattcgtccaatatatcatcaagaacat |
7052645 |
T |
|
| Q |
127 |
aagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttca |
186 |
Q |
| |
|
|||||||||| | || ||||||||||| ||||| ||||||| | |||| |||||||||| |
|
|
| T |
7052644 |
gagcagcatcagccagcttctgcagccaatcttttacagcatggcttgtaatttgcttca |
7052585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 38938842 - 38938682
Alignment:
| Q |
25 |
gacgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcac |
124 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||| ||||||||||| |||| | ||||| | |||||||||||||| ||||||||||||||||| || |
|
|
| T |
38938842 |
gacgagccaaaatcttcagaggatggaaacgagtgatccacttgttgtcgccatgtgcttttaaggttattgaacattcatccaatatatcatcaagtac |
38938743 |
T |
|
| Q |
125 |
ataagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
||||||| |||||| | |||||||||||| ||||||||| ||| | |||| ||||||||| |
|
|
| T |
38938742 |
ataagcaacatcacgcaatttctgcagccagtctttcacaacatggcttgtaatttgcttc |
38938682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 38166 - 38321
Alignment:
| Q |
29 |
agccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcacataa |
128 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||| |||||| | | |||| | |||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
38166 |
agccaaaatcttcacaggatggaaactagtgatgcacttgtcgtctccgtgtggttttaaggttattgaacattcatccaatatatcatcaagtacataa |
38265 |
T |
|
| Q |
129 |
gcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgctt |
184 |
Q |
| |
|
|||| |||||| |||| ||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
38266 |
gcagaatcaccgagttgctgtagccactctttcacggcatcgtttgttatttgctt |
38321 |
T |
|
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Target: scaffold0511 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 10035 - 10194
Alignment:
| Q |
26 |
acgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcaca |
125 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||| ||| || ||||||||||||||||| ||| |
|
|
| T |
10035 |
acgagccaaaatcttcttaggatgaaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatcatccaatatatcatcaagaaca |
10134 |
T |
|
| Q |
126 |
taagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|| ||| ||||| || ||||||||||| ||||||||| || | |||||||||||||| |
|
|
| T |
10135 |
taggcaacatcagttagcttctgcagccaatctttcacaacacggcttgttatttgcttc |
10194 |
T |
|
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Target: scaffold0230 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 5355 - 5514
Alignment:
| Q |
26 |
acgagccaaaatcttcataggatggaaacgggtgatgcacttgttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaagcaca |
125 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||| |||||||||||||||| | |||||||| |||||| ||| || ||||||||||| ||||| ||| |
|
|
| T |
5355 |
acgagccaaaatcatcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgattttattgtacaatcatccaatatatcgtcaagaaca |
5454 |
T |
|
| Q |
126 |
taagcagcatcaccaagtttctgcagccactctttcacagcatcgtttgttatttgcttc |
185 |
Q |
| |
|
|||||| ||||| || ||||||||||| ||||||||| || | |||||||||||||| |
|
|
| T |
5455 |
taagcaacatcagtcagcttctgcagccaatctttcacaacacggcttgttatttgcttc |
5514 |
T |
|
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Target: chr8 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 13378771 - 13378868
Alignment:
| Q |
27 |
cgagccaaaatcttcataggatggaaacgggtgatgcactt---gttgtctccattttcttttgatgttattgaacattcgtccaatatatcatcaag |
121 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||| ||||| || |||||||| | |||| ||| |||| ||| ||||||| |||||||||||||| |
|
|
| T |
13378771 |
cgagccaaaatcttcttaggatggaaacgagtgatccacttgtcgtcgtctccatgtgctttggatcttatcgaatattcgtctaatatatcatcaag |
13378868 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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