View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20722_low_26 (Length: 295)
Name: NF20722_low_26
Description: NF20722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20722_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 286
Target Start/End: Original strand, 37715425 - 37715691
Alignment:
| Q |
20 |
ccagatatattttgaatcacaatggcacctattttctccaccactactgtttgcaatgcatgtggaatggggccaacttttgcagctaaaatactcatca |
119 |
Q |
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| T |
37715425 |
ccagatatattttgaatcacaatggcacctattttctccaccactactgtttgcaatgcatgtggaatggggccaacttttgcagctaaaatactcatca |
37715524 |
T |
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| Q |
120 |
cattgtggttgtggtgctgctgcccaattgacctctatttgatcatctttaaaacaccaattagtcacattaaatggtaaactaggtttatcattttgat |
219 |
Q |
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| T |
37715525 |
cattgtggttgtggtgctgctgcccaattgacctctatttgatcatctttaaaacaccaattagtcacattaaatggtgaactaggtttatcattttgat |
37715624 |
T |
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| Q |
220 |
aactacttgaatcatcacagtgatttgtatcattcgtttgaatataaaactttctaccagcttcatc |
286 |
Q |
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| T |
37715625 |
aactacttgaatcatcacagtgatttgtatcattcgtttggatataaaactttctaccagcttcatc |
37715691 |
T |
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