View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20730_high_89 (Length: 245)
Name: NF20730_high_89
Description: NF20730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20730_high_89 |
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Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 53130046 - 53130267
Alignment:
| Q |
10 |
tcgaagaatataaaaaagttcaaaaaccctccaaaatagagtgtctgaaaaacttggagggtgggaaaagaaactctttaagagtgggcctta----agg |
105 |
Q |
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| T |
53130046 |
tcgaaaaatgtaaaaaagttcaaaaaccctccaaaatagagtgtctgaaaaacttggagggtgggaaaagaaactctttaagagtgcgccttatttaagg |
53130145 |
T |
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| Q |
106 |
cccagcccaattatctgcgtgcgaattacccaaaacgcagagttttggtattcaaaaccccagagtcccgaaaacaagagagnnnnnnnngacatagcga |
205 |
Q |
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| T |
53130146 |
cccagcccaattatctgcgtgcgaattacccaaaacgcagagttttggtattcaaaaccccagagtcccgaaaacgagagagaaaaaaaagacatagcga |
53130245 |
T |
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| Q |
206 |
ttctgaagaaggtggagagaat |
227 |
Q |
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||| ||||||||| |||||||| |
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| T |
53130246 |
ttccgaagaaggtagagagaat |
53130267 |
T |
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