View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20730_low_115 (Length: 206)
Name: NF20730_low_115
Description: NF20730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20730_low_115 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 32253142 - 32252954
Alignment:
| Q |
3 |
ccttccacccatttcatacacactcctttgaatcaaaccaattatgtttctcagtattatatgaaactcacctctttagctaatcaagtttatgagcaaa |
102 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||| |||| |
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| T |
32253142 |
ccttccacccatttcatacacactcctttgaatcaaaccaattatgtttctcagtattatatggaattcacctctgtagctaatcaagtttatgaacaaa |
32253043 |
T |
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| Q |
103 |
gcaataatattggtacactttaactaaatctcttatagatctctagatctaaaaaccacgactaccacaagcactcaccctcaaaacat |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32253042 |
gcaataatattggtacactttaactaaatctcttatagatctatagatctaaaaaccacgaccaccacaagcactcaccctcaaaacat |
32252954 |
T |
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