View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20730_low_20 (Length: 480)
Name: NF20730_low_20
Description: NF20730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20730_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 453; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 1 - 461
Target Start/End: Complemental strand, 36925579 - 36925119
Alignment:
| Q |
1 |
actctgcaatgaatctcagttggagtcgggtcttaaccgagattgggcctcggcctagtccggaacaacaatcaatcatcttttcaccgtgtgtttgatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36925579 |
actctgcaatgaatctcagttggagtcgggtcttaaccgagattgggcctcggcctagtccggaacaacaatcaatcatcttttcaccgtgtgtttgatg |
36925480 |
T |
|
| Q |
101 |
ggcttggagacaccgaaatttgatgtgcttgaatagcaaaacaatgtccttaaaccgcctctttttcaatattcaatacggtagaagtcctcaagtatag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36925479 |
ggcttggagacaccgaaatttgatgtgcttgaatagcaaaacaatgtccttaaaccgcctctttttcaatattcaatacggtagaagtcctcaagtatag |
36925380 |
T |
|
| Q |
201 |
cttctcgtacaatgttaatgttgcttcagatgattgtttaatcaagtggaataatagtaatcatcagtgtgtcattctaaatgtggatgagagttgtctt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36925379 |
cttctcgtacaatgttaatgttgcttcagatgattgtttaatcaagtggaataatagtaatcatcagtgtgtcattctaaatgtggatgagagttgtctt |
36925280 |
T |
|
| Q |
301 |
gggtcttcatccagggctggttttagaggcgtcctttgaaataatttaggtttctttttatcggctttgtcaactcaccttacatgttctttttatatta |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36925279 |
gggtcttcatccagggctggttttagaggcgtcctttgaaataatttaggtttctttttatcggctttgtcaactcaccttacatgttctttttatatta |
36925180 |
T |
|
| Q |
401 |
tgttcgctgaacttctgagatttacaaagatttcatcactgccaaaaacttgggtattgat |
461 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |
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| T |
36925179 |
tgttcgctgaacttctgaaatttacaaagatttcatcactgccaaagacttgggtattgat |
36925119 |
T |
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