View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20731_high_8 (Length: 269)
Name: NF20731_high_8
Description: NF20731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20731_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 41168123 - 41168345
Alignment:
| Q |
30 |
ggatattgctatccatctaatgtcaatgagacaaaggaaattccactctttacaaaggaaaagtcaaatacattttaaaacattataactgatatattct |
129 |
Q |
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| T |
41168123 |
ggatattgctatccatctaatgtcaatgagacaaaggaaattccactctttacaaaggaaaagtcaaatacattttaaaacattataactgatatattct |
41168222 |
T |
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| Q |
130 |
tctcccaatttcacacgtgactttatttcatgattctacatcatgtacatatcctagaagtgcttttgaatagagcactaaaatattcaaaaagggtcta |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41168223 |
tctcccaatttcacacgtgactttatttcatgattctacatcatgtacatatcctagaagtgcttttgaatagagcactaaaatattcaaaaagggtcta |
41168322 |
T |
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| Q |
230 |
aaatggccagcataaagaacgtg |
252 |
Q |
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||||||||||||||||||||||| |
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| T |
41168323 |
aaatggccagcataaagaacgtg |
41168345 |
T |
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