View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20736_high_17 (Length: 294)

Name: NF20736_high_17
Description: NF20736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20736_high_17
NF20736_high_17
[»] chr1 (16 HSPs)
chr1 (29-281)||(14084336-14084588)
chr1 (29-151)||(30004673-30004796)
chr1 (29-166)||(17487029-17487168)
chr1 (97-166)||(51109849-51109918)
chr1 (29-166)||(50552670-50552811)
chr1 (29-163)||(48722119-48722255)
chr1 (29-166)||(6150897-6151036)
chr1 (123-166)||(20470884-20470927)
chr1 (29-160)||(30899835-30899972)
chr1 (29-153)||(28885434-28885560)
chr1 (29-60)||(10109899-10109930)
chr1 (120-166)||(20905036-20905082)
chr1 (121-166)||(6333020-6333065)
chr1 (102-151)||(12971655-12971704)
chr1 (35-64)||(15441470-15441499)
chr1 (97-154)||(29207855-29207912)
[»] chr4 (13 HSPs)
chr4 (29-166)||(53011890-53012028)
chr4 (29-167)||(11681491-11681630)
chr4 (29-167)||(11689770-11689909)
chr4 (98-163)||(29221377-29221442)
chr4 (97-167)||(41038496-41038566)
chr4 (29-166)||(19661554-19661694)
chr4 (29-167)||(32130539-32130679)
chr4 (29-154)||(27632573-27632700)
chr4 (29-64)||(41038424-41038459)
chr4 (97-159)||(28463344-28463405)
chr4 (72-151)||(44478259-44478338)
chr4 (97-154)||(23256842-23256898)
chr4 (29-60)||(23426024-23426055)
[»] chr5 (14 HSPs)
chr5 (29-165)||(26312163-26312299)
chr5 (29-164)||(12661483-12661619)
chr5 (97-166)||(13474875-13474944)
chr5 (97-166)||(36718379-36718448)
chr5 (97-166)||(37047027-37047096)
chr5 (29-166)||(13424040-13424178)
chr5 (29-159)||(26377533-26377663)
chr5 (102-153)||(931618-931669)
chr5 (118-164)||(10591028-10591074)
chr5 (97-154)||(13656456-13656512)
chr5 (31-60)||(27351527-27351556)
chr5 (120-153)||(41612990-41613023)
chr5 (102-162)||(3349484-3349544)
chr5 (102-166)||(43511870-43511934)
[»] chr2 (18 HSPs)
chr2 (29-166)||(41096290-41096425)
chr2 (29-166)||(18676060-18676199)
chr2 (29-166)||(4856168-4856306)
chr2 (29-166)||(26151498-26151636)
chr2 (29-166)||(45619151-45619289)
chr2 (29-166)||(2063981-2064118)
chr2 (97-165)||(42759507-42759575)
chr2 (29-154)||(6530834-6530963)
chr2 (29-164)||(36481570-36481706)
chr2 (29-166)||(45042565-45042704)
chr2 (97-154)||(34061628-34061685)
chr2 (29-153)||(7993807-7993932)
chr2 (30-166)||(13020598-13020735)
chr2 (29-162)||(12269600-12269735)
chr2 (97-166)||(19367175-19367244)
chr2 (102-166)||(17117396-17117460)
chr2 (102-165)||(21746983-21747046)
chr2 (102-163)||(15457751-15457812)
[»] chr8 (12 HSPs)
chr8 (29-167)||(43926075-43926212)
chr8 (29-166)||(18420356-18420497)
chr8 (97-164)||(1004302-1004369)
chr8 (29-162)||(3445710-3445842)
chr8 (97-167)||(7858329-7858399)
chr8 (97-166)||(13585550-13585619)
chr8 (29-154)||(42951557-42951684)
chr8 (29-60)||(13585474-13585505)
chr8 (97-160)||(44664360-44664423)
chr8 (97-154)||(27074718-27074775)
chr8 (121-153)||(3471867-3471899)
chr8 (102-162)||(34523709-34523769)
[»] chr3 (21 HSPs)
chr3 (72-166)||(6715658-6715752)
chr3 (29-166)||(28132485-28132625)
chr3 (29-167)||(52654872-52655011)
chr3 (72-154)||(23164334-23164416)
chr3 (29-151)||(25598848-25598971)
chr3 (29-159)||(8364348-8364479)
chr3 (29-164)||(51939307-51939444)
chr3 (29-166)||(13401635-13401771)
chr3 (97-151)||(27110636-27110690)
chr3 (31-64)||(19965731-19965764)
chr3 (29-62)||(27729625-27729658)
chr3 (29-166)||(24252796-24252933)
chr3 (29-60)||(18408366-18408397)
chr3 (29-60)||(54430729-54430760)
chr3 (97-167)||(21784530-21784599)
chr3 (30-64)||(23067579-23067613)
chr3 (97-162)||(46791451-46791514)
chr3 (121-166)||(54430817-54430862)
chr3 (102-154)||(29387511-29387563)
chr3 (102-166)||(43905604-43905668)
chr3 (102-162)||(48626784-48626844)
[»] scaffold0181 (1 HSPs)
scaffold0181 (29-154)||(16896-17022)
[»] chr7 (15 HSPs)
chr7 (29-166)||(33910239-33910378)
chr7 (29-166)||(12251034-12251176)
chr7 (97-166)||(44893778-44893847)
chr7 (29-166)||(42160873-42161011)
chr7 (29-137)||(18015360-18015469)
chr7 (97-167)||(6379834-6379904)
chr7 (97-153)||(4100205-4100261)
chr7 (101-151)||(32957016-32957066)
chr7 (97-166)||(11672835-11672904)
chr7 (97-154)||(36796134-36796191)
chr7 (29-60)||(4100133-4100164)
chr7 (120-166)||(44875910-44875956)
chr7 (35-64)||(773736-773765)
chr7 (102-167)||(1366258-1366323)
chr7 (102-166)||(26282283-26282347)
[»] scaffold0564 (1 HSPs)
scaffold0564 (29-166)||(1237-1375)
[»] chr6 (12 HSPs)
chr6 (29-166)||(2618529-2618666)
chr6 (97-159)||(3514606-3514668)
chr6 (72-153)||(22503963-22504044)
chr6 (101-164)||(29401387-29401450)
chr6 (123-166)||(31258322-31258365)
chr6 (29-159)||(6360934-6361069)
chr6 (102-162)||(1092796-1092856)
chr6 (102-166)||(29308218-29308282)
chr6 (102-153)||(1690481-1690532)
chr6 (29-60)||(12614576-12614607)
chr6 (120-153)||(11088836-11088869)
chr6 (97-145)||(29149635-29149683)
[»] scaffold0126 (1 HSPs)
scaffold0126 (29-161)||(16885-17019)
[»] scaffold0035 (1 HSPs)
scaffold0035 (29-134)||(22588-22694)


Alignment Details
Target: chr1 (Bit Score: 153; Significance: 4e-81; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 29 - 281
Target Start/End: Complemental strand, 14084588 - 14084336
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctaca-cnnnnnnnttacgttttattttattataggtctattt 125  Q
    |||||||||||||||||||||||||||||||| |||         ||||||||||||||||| |       |||||||||||||||||||||||||||||    
T  14084588 aattcctttcatgtttagaagttcttctgattctgatttttttttaatgaaatttagctacaacaaaaaaattacgttttattttattataggtctattt 14084489  T
Q  126 taaaaagagagctgagcctcctatttcactgggacggccctagtaataggaaaagaaacacaaatccatgaccatggcacccccaatacttgccaacatc 225  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  14084488 taaaaagagagccgagcctcctattttactgggacggctctagtaataggaaaagaaacacaaatccatgaccagggcatccccaatacttgccaacatc 14084389  T
Q  226 aacacccccttcaccctctgtcgtcgcgcttctgtcactatcatattcatttgcct 281  Q
    |||||||||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  14084388 aacacccccttcaccctct---gtcgcgcttctatcactatcatattcatttgcct 14084336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 30004796 - 30004673
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||||||| |||        |||||| |||||||||||       ||||||||||||||| ||| || ||||||||    
T  30004796 aattcctttcatgtttagaagttcttctgattctgatttaattcaatgaagtttagctacacaaaaaaattacgttttattttactatgggcctatttta 30004697  T
Q  128 aaaagagagctgagcctcctattt 151  Q
    |||||||||| |||||||||||||    
T  30004696 aaaagagagccgagcctcctattt 30004673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 17487168 - 17487029
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||| ||||||||||| |||         ||||||||||||||||||       ||||||||||||||| ||  || |||||||    
T  17487168 aattcctttcatgtttagaacttcttctgattctgagtttttttcaatgaaatttagctacacaaaaaaattacgttttattttactaagggcctatttt 17487069  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||  |||||||||||||||| |||||| ||||    
T  17487068 aaaaagagagtcgagcctcctatttcacggggacgaccct 17487029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 51109918 - 51109849
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| ||  || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  51109918 ttacgttttattttactaggggcctattttaaaaagagagccgagcctcctatttcacagggacggccct 51109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 50552670 - 50552811
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn----aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatt 124  Q
    |||||||||||||||||||||||||| ||||| |||           ||||||||||||||||||       ||| ||||||||||| ||  ||| ||||    
T  50552670 aattcctttcatgtttagaagttcttttgattctgatttttttttttaatgaaatttagctacacaaaaaaattaagttttattttactaagggtttatt 50552769  T
Q  125 ttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||||||||||||||| || ||||| |||||    
T  50552770 ttaaaaagagagctgagcctcctattttacagggacagccct 50552811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 48722255 - 48722119
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||| ||||||||||||||||||||||||||| |||         ||||||||||| ||||||       ||||||||||||||| ||| |  |||||||    
T  48722255 aatttctttcatgtttagaagttcttctgattctgatttttttttaatgaaatttaactacacaacaaaattacgttttattttactatggacctatttt 48722156  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggc 163  Q
    ||||||||||  ||||||||||||||||  |||||||    
T  48722155 aaaaagagagtcgagcctcctatttcacacggacggc 48722119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 6150897 - 6151036
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||||||||||||||| |           ||||||||||||||||||       ||| ||||||||||| ||  ||  ||||||    
T  6150897 aattcctttcatgtttagaagttcttctgattctattttttttttaatgaaatttagctacacaaaaaaattatgttttattttactaagggcttatttt 6150996  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||  |||||||||||||||| |||||||||||    
T  6150997 aaaaagagagtcgagcctcctatttcacagggacggccct 6151036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 20470884 - 20470927
Alignment:
Q  123 ttttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  20470884 ttttaaaaagagagccgagcctcctatttcacggggacggccct 20470927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 30899835 - 30899972
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga--nnnnnnnaatgaaatttagctacacnnnnnnnttacgttttatttt----attataggtcta 122  Q
    |||||||||||||||||||||||||||||||| |||         ||||||||||| ||| ||       ||||||||||||||    ||||  ||||||    
T  30899835 aattcctttcatgtttagaagttcttctgattctgatttttttttaatgaaatttaactagacaaaaaaattacgttttattttactaattaagggtcta 30899934  T
Q  123 ttttaaaaagagagctgagcctcctatttcactgggac 160  Q
    ||||||||||||||| || ||||||||||||| |||||    
T  30899935 ttttaaaaagagagccgaacctcctatttcacagggac 30899972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 28885560 - 28885434
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||||||||||| ||| |||         ||||||||||| ||||||       ||||||||||||||| ||    ||||||||    
T  28885560 aattcctttcatgtttagaagttcttctaattctgatttttttttaatgaaatttaactacacaaaaaaattacgttttattttactaggtatctatttt 28885461  T
Q  127 aaaaagagagctgagcctcctatttca 153  Q
    ||||||||||  |||||||||||||||    
T  28885460 aaaaagagagtcgagcctcctatttca 28885434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 10109899 - 10109930
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||||    
T  10109899 aattcctttcatgtttagaagttcttctgatt 10109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 20905082 - 20905036
Alignment:
Q  120 ctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||||||||||  |||||||||||||||| |||||| ||||    
T  20905082 ctattttaaaaagagagtcgagcctcctatttcacagggacgaccct 20905036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 6333065 - 6333020
Alignment:
Q  121 tattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||||||||| | ||||||||||||| | |||||||||||    
T  6333065 tattttaaaaagagagttcagcctcctatttcgcagggacggccct 6333020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 12971655 - 12971704
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctattt 151  Q
    |||||||||||||  ||| ||||||||| ||||||| |||||||||||||    
T  12971655 ttttattttattaggggtttattttaaatagagagccgagcctcctattt 12971704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 15441470 - 15441499
Alignment:
Q  35 tttcatgtttagaagttcttctgattttga 64  Q
    ||||||||||||||||||||||||||||||    
T  15441470 tttcatgtttagaagttcttctgattttga 15441499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 29207912 - 29207855
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||||||| ||| |  |||||||| ||||||||  ||||||||||||||||    
T  29207912 ttacgttttattttactatggacctattttagaaagagagtcgagcctcctatttcac 29207855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 53011890 - 53012028
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||||||| |||        ||||||||||||||||||       ||||||||||||||| |||  | ||||||||    
T  53011890 aattcctttcatgtttagaagttcttctgattctgattttttttaatgaaatttagctacacaaaaaaattacgttttattttactatgagcctatttta 53011989  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||| |||||||||||||||| || ||||||||    
T  53011990 aaaagagagccgagcctcctatttcacaggaacggccct 53012028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 11681630 - 11681491
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| || |||||||| |||        ||||||||||||||||||       ||| ||||||||||| ||  || ||||||||    
T  11681630 aattcctttcatgtttagaactttttctgattctgattttttttaatgaaatttagctacacaaaaaagttatgttttattttactaggggcctatttta 11681531  T
Q  128 aaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    |||||||||  |||||||||||||||| ||||||||||||    
T  11681530 aaaagagagtcgagcctcctatttcacggggacggcccta 11681491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 11689909 - 11689770
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| || |||||||| |||        ||||||||||||||||||       ||| ||||||||||| ||  || ||||||||    
T  11689909 aattcctttcatgtttagaactttttctgattctgattttttttaatgaaatttagctacacaaaaaagttatgttttattttactaggggcctatttta 11689810  T
Q  128 aaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    |||||||||  |||||||||||||||| ||||||||||||    
T  11689809 aaaagagagtcgagcctcctatttcacggggacggcccta 11689770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 29221442 - 29221377
Alignment:
Q  98 tacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggc 163  Q
    |||||||||||||| || ||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  29221442 tacgttttattttactagaggcctattttaaaaagagagccgagcctcctatttcacagggacggc 29221377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 41038496 - 41038566
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    |||| |||||||||| ||  || |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  41038496 ttacattttattttactaggggcctattttaaaaagagagccgagcctcctatttcaccgggacggcccta 41038566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 19661554 - 19661694
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn---aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattt 125  Q
    |||||||||||||||||||||||||||||||| ||           ||||||||||| ||||||       ||| ||||||||||| ||   | ||||||    
T  19661554 aattcctttcatgtttagaagttcttctgattctgtttttttttttaatgaaatttaactacacaaaaaaattatgttttattttactaggagcctattt 19661653  T
Q  126 taaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  19661654 taaaaagagagcagagcctcctatttcactaggacggccct 19661694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 32130679 - 32130539
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga--nnnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||||||||||||||| |||         ||| ||||||||||||||       ||||||||||||||| ||  |  |||||||    
T  32130679 aattcctttcatgtttagaagttcttctgattctgatttttttttaataaaatttagctacacaaaaaaattacgttttattttactaaggacctatttt 32130580  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    ||||  ||||| |||||||||||||||| ||||||| ||||    
T  32130579 aaaagaagagccgagcctcctatttcacagggacggtccta 32130539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 27632573 - 27632700
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||||||||||||||| |||         |||||| |||| ||||||       ||||||||||||||| ||  || |||||||    
T  27632573 aattcctttcatgtttagaagttcttctgattctgatttttttttaatgaagtttaactacacaaaaaaattacgttttattttactaggggcctatttt 27632672  T
Q  127 aaaaagagagctgagcctcctatttcac 154  Q
    |||| |||||| ||||||||||||||||    
T  27632673 aaaatgagagccgagcctcctatttcac 27632700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 41038424 - 41038459
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  41038424 aattcctttcatgtttagaagttcttctgattttga 41038459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 28463405 - 28463344
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactggga 159  Q
    |||| |||||||||| || || |||||||||||||| ||||||||||||||||||||| ||||    
T  28463405 ttacattttattttactaaagatctattttaaaaag-gagctgagcctcctatttcacgggga 28463344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 44478259 - 44478338
Alignment:
Q  72 aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaaaaagagagctgagcctcctattt 151  Q
    ||||||||||||||||||       ||||||||||||||| || || ||||||||||||||||||  || ||||||||||    
T  44478259 aatgaaatttagctacacaaaaaaattacgttttattttactaaagatctattttaaaaagagagtcgaacctcctattt 44478338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 23256842 - 23256898
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||||||| ||  || |||||||||||||||||| ||||||||||||||||    
T  23256842 ttacgttttattttactag-ggcctattttaaaaagagagccgagcctcctatttcac 23256898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Complemental strand, 23426055 - 23426024
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||||    
T  23426055 aattcctttcatgtttagaagttcttctgatt 23426024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 26312163 - 26312299
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    |||||||||||||||||||| ||||||||||| |||       ||||||||||||||||||       ||||||||||||||| |||  | |||||||||    
T  26312163 aattcctttcatgtttagaacttcttctgattctgatttttttaatgaaatttagctacacaaaaaaattacgttttattttactattagcctattttaa 26312262  T
Q  129 aaagagagctgagcctcctatttcactgggacggccc 165  Q
    || |||||  |||||||||||||||| ||||||||||    
T  26312263 aatgagagtcgagcctcctatttcacggggacggccc 26312299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 12661483 - 12661619
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||||||| |||        ||| ||||||||||||||       ||||||||||||||| || ||  ||||||||    
T  12661483 aattcctttcatgtttagaagttcttctgattctgattttttttaataaaatttagctacacaaaaaaattacgttttattttactaaagacctatttta 12661582  T
Q  128 aaaagagagctgagcctcctatttcactgggacggcc 164  Q
    |||||||||| |||||||| ||||||| |||||||||    
T  12661583 aaaagagagccgagcctcccatttcacagggacggcc 12661619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 13474875 - 13474944
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| || ||| |||||||||||||||||  |||||||||||||||| |||||||||||    
T  13474875 ttacgttttattttactagaggcctattttaaaaagagagtcgagcctcctatttcacggggacggccct 13474944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 36718448 - 36718379
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| ||| | |||||||||||||||||| |||||||||||||| || | |||||||||    
T  36718448 ttacgttttattttactatggatctattttaaaaagagagttgagcctcctattttacagagacggccct 36718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 37047027 - 37047096
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| ||  || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  37047027 ttacgttttattttactaagggcctattttaaaaagagagccgaacctcctatttcacggggacggccct 37047096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 13424040 - 13424178
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    ||||||||||||||||| |||||||||||||| |||        ||||||||||| ||||||       |||  |||||| ||| || ||  ||||||||    
T  13424040 aattcctttcatgtttaaaagttcttctgattctgattttttttaatgaaatttaactacacaaaaaaattagtttttatcttactagagacctatttta 13424139  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  13424140 aaaagagagccgagcctcctatttcacagggacggccct 13424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 26377663 - 26377533
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    |||||||||||||||||||| ||||||||||| |||       ||||||||| ||||||||       ||| ||| ||||||| ||  || |||||||||    
T  26377663 aattcctttcatgtttagaacttcttctgattctgatttttttaatgaaattgagctacacaaaaaaattatgttctattttactaggggcctattttaa 26377564  T
Q  129 aaagagagctgagcctcctatttcactggga 159  Q
    ||||||||  |||||||||||||||| ||||    
T  26377563 aaagagagtcgagcctcctatttcacgggga 26377533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 931618 - 931669
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttca 153  Q
    |||| ||||| || |||||||||||||||||||||| || ||||||||||||    
T  931618 ttttgttttactagaggtctattttaaaaagagagccgaacctcctatttca 931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 10591074 - 10591028
Alignment:
Q  118 gtctattttaaaaagagagctgagcctcctatttcactgggacggcc 164  Q
    |||||||||||| ||||||| |||||||||||||||  |||||||||    
T  10591074 gtctattttaaatagagagccgagcctcctatttcatagggacggcc 10591028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 13656456 - 13656512
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||||||| ||| |  |||||||||||||||||| || |||||||||||||    
T  13656456 ttacgttttattttactat-gacctattttaaaaagagagccgaacctcctatttcac 13656512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 27351527 - 27351556
Alignment:
Q  31 ttcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||    
T  27351527 ttcctttcatgtttagaagttcttctgatt 27351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 41612990 - 41613023
Alignment:
Q  120 ctattttaaaaagagagctgagcctcctatttca 153  Q
    |||||||||||||||||| |||||||||||||||    
T  41612990 ctattttaaaaagagagcagagcctcctatttca 41613023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 3349544 - 3349484
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 162  Q
    ||||||||||||  ||  |||||||||| ||||||| |||||||||||||||  |||||||    
T  3349544 ttttattttattggagacctattttaaatagagagccgagcctcctatttcatagggacgg 3349484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 43511870 - 43511934
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||   || |||||||||| ||||||| |||||||||||||||  |||||| ||||    
T  43511870 ttttattttattgggggcctattttaaatagagagccgagcctcctatttcatagggacgaccct 43511934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 41096425 - 41096290
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    |||||||||||||||||||||||||||| ||| ||        ||||||||||| ||||||       ||||||||||||||| ||  ||||||||||||    
T  41096425 aattcctttcatgtttagaagttcttcttattatgttttttttaatgaaatttaactacacaaaaa--ttacgttttattttactaggggtctattttaa 41096328  T
Q  129 aaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  41096327 aaagagagccgagcctcctatttcacagggacggccct 41096290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 18676199 - 18676060
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||||||||||||||| |||         ||||||||||||||||||       ||||||||||||||| ||  || |||||||    
T  18676199 aattcctttcatgtttagaagttcttctgattctgatttttttttaatgaaatttagctacacaaaaaaattacgttttattttactaggggcctatttt 18676100  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    | ||||||||||||||||| |||||||| |||||| ||||    
T  18676099 ataaagagagctgagcctcttatttcacagggacgaccct 18676060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 4856168 - 4856306
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| ||||||||||| |||        ||||||||||||||||||       ||||||||||||||| ||  || ||||||||    
T  4856168 aattcctttcatgtttagaacttcttctgattctgattttttttaatgaaatttagctacacaaaaaaattacgttttattttactaggggcctatttta 4856267  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||  |||||||||||||||| |||||| ||||    
T  4856268 aaaagagagtcgagcctcctatttcacggggacgaccct 4856306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 26151636 - 26151498
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||| ||||||||||||||| ||||||||||| |||        ||||||||||||||||||       ||||||||||||||| ||  || ||||||||    
T  26151636 aattactttcatgtttagaacttcttctgattctgattttttttaatgaaatttagctacacaaaaaaattacgttttattttactaggggcctatttta 26151537  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||  ||||||||||||||| |||||||||||    
T  26151536 aaaagagagccaagcctcctatttcacggggacggccct 26151498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 45619151 - 45619289
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| ||||||||||| |||        |||||||||||||| |||       ||||||||||||||| ||  || ||||||||    
T  45619151 aattcctttcatgtttagaacttcttctgattctgattttttttaatgaaatttagcttcacaaacaaattacgttttattttactaagggcctatttta 45619250  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||  ||||||| |||||||| |||||||||||    
T  45619251 aaaagagagtcgagcctcgtatttcacggggacggccct 45619289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 2063981 - 2064118
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    |||||||| ||| |||||||| |||||||||| |||       |||||| |||||||||||       ||||||||||||||| ||  |  |||||||||    
T  2063981 aattccttccatatttagaaggtcttctgattctgatttttttaatgaagtttagctacacaaagatattacgttttattttactacggacctattttaa 2064080  T
Q  129 aaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||| ||||||||||||||||| || ||||||||    
T  2064081 aaagagagttgagcctcctatttcacaggaacggccct 2064118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 42759575 - 42759507
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccc 165  Q
    ||||||||||||||| ||| |  ||||||||||||||| ||||||||||||||||||| | ||||||||    
T  42759575 ttacgttttattttactatggacctattttaaaaagagggctgagcctcctatttcacggagacggccc 42759507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 6530834 - 6530963
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn----aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatt 124  Q
    |||||||||||||||||||||||||| ||||| |||           ||||||||||||||||||       ||||||||||||||| ||   | |||||    
T  6530834 aattcctttcatgtttagaagttcttttgattctgatttttttttttaatgaaatttagctacacaaagaaattacgttttattttaataggagcctatt 6530933  T
Q  125 ttaaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||||| ||||||||||||||||    
T  6530934 ttaaaaagagagccgagcctcctatttcac 6530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 36481570 - 36481706
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga-nnnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||||||| |||        ||||||||||| | ||||       ||||||||||||||| || | | ||||||||    
T  36481570 aattcctttcatgtttagaagttcttctgattctgattttttttaatgaaatttaaccacacaaaaaaattacgttttattttactagaagactatttta 36481669  T
Q  128 aaaagagagctgagcctcctatttcactgggacggcc 164  Q
    ||||||||||  | |||||||| |||| |||||||||    
T  36481670 aaaagagagccaaacctcctatgtcacagggacggcc 36481706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 45042565 - 45042704
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||| |||||||||||||| |||| |||         |||||| |||||||||||       ||||||||||||||| ||| ||||||||||    
T  45042565 aattcctttcatatttagaagttcttccgattctgatttttttttaatgaagtttagctacacaaaaaaattacgttttattttactatgggtctatttt 45042664  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||| |||| ||  ||| |||||||| |||||||||||    
T  45042665 aaaaagtgagccgattctcatatttcacagggacggccct 45042704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 34061685 - 34061628
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||||||| ||  ||  ||||||||||||||||||||||||||||||||||    
T  34061685 ttacgttttattttactaggggcttattttaaaaagagagctgagcctcctatttcac 34061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 7993807 - 7993932
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga-nnnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||||||| |||        ||||||||||| ||||||       ||| ||||||||||| ||   | ||||||||    
T  7993807 aattcctttcatgtttagaagttcttctgattctgattttttttaatgaaatttaactacacaaaaaaattatgttttattttactaggtgcctatttta 7993906  T
Q  128 aaaagagagctgagcctcctatttca 153  Q
    |||||||||| || ||||||||||||    
T  7993907 aaaagagagccgaacctcctatttca 7993932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 13020598 - 13020735
Alignment:
Q  30 attcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    ||||||||||||||||||| ||||||| ||| |||        ||||||||||||| ||||       ||||||||||||||| ||  || |||||||||    
T  13020598 attcctttcatgtttagaacttcttctaattctgattttttttaatgaaatttagcaacacaaaaaaattacgttttattttactaggggcctattttaa 13020697  T
Q  129 aaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||| || |||||||||  || |||||||||||    
T  13020698 aaagagagccgaacctcctattctacggggacggccct 13020735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 12269600 - 12269735
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga--nnnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||||||||||||||| |||         ||||||||||||||||||       ||||||||||||||| ||     |||||||    
T  12269600 aattcctttcatgtttagaagttcttctgattctgattttcttttaatgaaatttagctacacaaaaaaattacgttttattttaataggaacctatttt 12269699  T
Q  127 aaaaagagagctgagcctcctatttcactgggacgg 162  Q
    ||||||||||  ||| || ||||||||| |||||||    
T  12269700 aaaaagagagtcgagtctactatttcacagggacgg 12269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 19367244 - 19367175
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| ||   | |||||||||||||||||   ||||||||||||||| |||||||||||    
T  19367244 ttacgttttattttactaggagcctattttaaaaagagagtcaagcctcctatttcacagggacggccct 19367175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 17117460 - 17117396
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||   || |||||||||| ||||||| |||||||||||||||  |||||||||||    
T  17117460 ttttattttattgggggcctattttaaatagagagccgagcctcctatttcatagggacggccct 17117396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 21747046 - 21746983
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccc 165  Q
    ||||||||||||  ||  |||||||||| ||||||| |||||||||||||||  ||||||||||    
T  21747046 ttttattttattggagacctattttaaatagagagccgagcctcctatttcatagggacggccc 21746983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 15457751 - 15457812
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggc 163  Q
    ||||||||||||  ||  |||||||||| ||||||| |||||||||||||||  ||||||||    
T  15457751 ttttattttattgaagacctattttaaatagagagccgagcctcctatttcatagggacggc 15457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 43926212 - 43926075
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    |||||||||||||||||||| ||||||||||| |||       | ||||||||||||||||       ||||||||||||||| || ||| |||||||||    
T  43926212 aattcctttcatgtttagaacttcttctgattctgatttttt-agtgaaatttagctacacaaaaaaattacgttttattttactaaaggcctattttaa 43926114  T
Q  129 aaagagagctgagcctcctatttcactgggacggcccta 167  Q
    ||||||||| |||| ||||||||||| | ||||||||||    
T  43926113 aaagagagccgagcttcctatttcacggagacggcccta 43926075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 18420497 - 18420356
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn----aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatt 124  Q
    ||||||||||||||||||||||| |||||||| |||           ||||||||||||||||||       ||||||||||||||| ||   | |||||    
T  18420497 aattcctttcatgtttagaagttattctgattctgatttttttttttaatgaaatttagctacacaaaaaaattacgttttattttactaggagactatt 18420398  T
Q  125 ttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||| |||||||||||||||| |||||| ||||    
T  18420397 ttaaaaagagagccgagcctcctatttcacagggacgaccct 18420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 1004302 - 1004369
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcc 164  Q
    ||||||||||||||| ||| | ||||||||||||| ||||  |||||||||||||||| |||||||||    
T  1004302 ttacgttttattttactatggatctattttaaaaaaagagtcgagcctcctatttcacggggacggcc 1004369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 3445710 - 3445842
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    ||||| |||||||||||||||||||||||||| |||        ||||||||||| ||||||       ||||||||||||||| ||  || ||||||||    
T  3445710 aattcttttcatgtttagaagttcttctgattctgattttttttaatgaaatttaactacacaaaaa--ttacgttttattttactaggggcctatttta 3445807  T
Q  128 aaaagagagctgagcctcctatttcactgggacgg 162  Q
    |||||||||  |||||||||||||||| |||||||    
T  3445808 aaaagagagtcgagcctcctatttcacagggacgg 3445842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 7858329 - 7858399
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    ||||||||||||||| ||  || |||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  7858329 ttacgttttattttactaggggcctattttaaaaagagagtcgagcctcctattccacggggacggcccta 7858399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 13585550 - 13585619
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||| |||||||||| ||  || |||||||||||||||||  |||||||||||||||| |||||||||||    
T  13585550 ttacattttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacagggacggccct 13585619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 42951684 - 42951557
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||| ||||||||| ||||| |||         ||||||||||||||||||       ||||||||||||||| ||     |||||||    
T  42951684 aattcctttcatgtttggaagttcttatgattctgattttttttaaatgaaatttagctacacaaaaaaattacgttttattttactagtaacctatttt 42951585  T
Q  127 aaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||| ||||||||||||||||    
T  42951584 aaaaagagagccgagcctcctatttcac 42951557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 13585474 - 13585505
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||||    
T  13585474 aattcctttcatgtttagaagttcttctgatt 13585505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 44664423 - 44664360
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggac 160  Q
    ||||||||||||||| ||  |  |||||||||||||||||| ||||| |||||||||| |||||    
T  44664423 ttacgttttattttactagggacctattttaaaaagagagccgagccacctatttcacagggac 44664360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 27074718 - 27074775
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||||||| ||| |  |||||||||||||| ||| ||||||| ||||||||    
T  27074718 ttacgttttattttactatggacctattttaaaaagatagccgagcctcatatttcac 27074775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 3471867 - 3471899
Alignment:
Q  121 tattttaaaaagagagctgagcctcctatttca 153  Q
    ||||||||||||||||| |||||||||||||||    
T  3471867 tattttaaaaagagagccgagcctcctatttca 3471899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 34523769 - 34523709
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 162  Q
    ||||||||||||   || |||||||||| ||||||| |||||||||||||||  |||||||    
T  34523769 ttttattttattgggggcctattttaaatagagagccgagcctcctatttcatagggacgg 34523709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 6715658 - 6715752
Alignment:
Q  72 aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||||||       ||||||||||||||| ||  | ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  6715658 aatgaaatttagctacacaaaaaaattacgttttattttactaaggatctattttaaaaagagagccgagcctcctatttcacggggacggccct 6715752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 28132625 - 28132485
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnn--ttacgttttattttattataggtctattt 125  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||         |||  |||||||||| ||  || ||||||    
T  28132625 aattcctttcatgtttagaagttcttctgattttgatttcttttaatgaaatttagctacacaaaaaaaaattatattttattttactaggggcctattt 28132526  T
Q  126 taaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  28132525 taaaaagagagccgagcctcctatttcacagggacggccct 28132485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 52655011 - 52654872
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||||||| | |        ||||||||||| ||||||       ||||||||||||||| ||  |  ||||||||    
T  52655011 aattcctttcatgtttagaagttcttctgattctaattttttttaatgaaatttaactacacaaaaaaattacgttttattttactagggacctatttta 52654912  T
Q  128 aaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    ||||||||| ||||||||||||||||| || |||||||||    
T  52654911 aaaagagagttgagcctcctatttcacaggaacggcccta 52654872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 23164416 - 23164334
Alignment:
Q  72 aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    ||||||||||||||||||       ||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||    
T  23164416 aatgaaatttagctacacaaaaaaattatgttttattttactagaggcctattttaaaaagagagctgtgcctcctatttcac 23164334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 25598971 - 25598848
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||| ||||||||||||||||||||||||||| |||        |||||| |||||||||||       ||||||||||||||| || ||  ||||||||    
T  25598971 aatttctttcatgtttagaagttcttctgattctgattttttttaatgaagtttagctacacaaaaaaattacgttttattttactaaagacctatttta 25598872  T
Q  128 aaaagagagctgagcctcctattt 151  Q
    |||||||||| |||||||||||||    
T  25598871 aaaagagagccgagcctcctattt 25598848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 8364348 - 8364479
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| ||||||||||| | |        ||||||||||||| ||||       ||||||||||||||| ||| || ||||||||    
T  8364348 aattcctttcatgtttagaacttcttctgattctaattttttttaatgaaatttagcaacacaaaaaaattacgttttattttactatgggcctatttta 8364447  T
Q  128 aaaagagagctgagcctcctatttcactggga 159  Q
    |||||||||  |||||||||||| ||| ||||    
T  8364448 aaaagagagtcgagcctcctattccacaggga 8364479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 164
Target Start/End: Complemental strand, 51939444 - 51939307
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||||||||||| ||| |||         ||||||||||||||||||       ||||||| ||||||| ||   | |||||||    
T  51939444 aattcctttcatgtttagaagttcttctcattctgatttttttttaatgaaatttagctacacaaaaaaattacgttatattttaataggagcctatttt 51939345  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggcc 164  Q
    ||||||||||  |||||| ||||||||| |||||||||    
T  51939344 aaaaagagagtcgagcctactatttcacagggacggcc 51939307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 13401635 - 13401771
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    |||||||||||||||||||||||||||||| ||| |       |||||| |||| ||||||       |||| |||||||||| ||  |  |||||||||    
T  13401635 aattcctttcatgtttagaagttcttctga-tttcatttttttaatgaagtttaactacacaaaaaagttacattttattttactaaggacctattttaa 13401733  T
Q  129 aaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||  ||||||||||||| || |||||||||||    
T  13401734 aaagagagtcgagcctcctattttacagggacggccct 13401771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 27110690 - 27110636
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctattt 151  Q
    ||||||||||||||| ||  ||||||||||||||||||||  |||||||||||||    
T  27110690 ttacgttttattttactacgggtctattttaaaaagagagtcgagcctcctattt 27110636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 19965764 - 19965731
Alignment:
Q  31 ttcctttcatgtttagaagttcttctgattttga 64  Q
    ||||||||||||||||||||||||||||||||||    
T  19965764 ttcctttcatgtttagaagttcttctgattttga 19965731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 27729658 - 27729625
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatttt 62  Q
    ||||||||||||||||||||||||||||||||||    
T  27729658 aattcctttcatgtttagaagttcttctgatttt 27729625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 24252796 - 24252933
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| ||||||||||| | |        ||||||||||||||||||       ||| |||||||| ||  || || ||||||||    
T  24252796 aattcctttcatgtttagaacttcttctgattctaattttttttaatgaaatttagctacacaaaaaaattatgttttattatacaatgggcctatttta 24252895  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||  || ||||||||||||| |||||||||||    
T  24252896 aaaagagagacgaacctcctatttcac-gggacggccct 24252933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 18408366 - 18408397
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||||    
T  18408366 aattcctttcatgtttagaagttcttctgatt 18408397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 54430729 - 54430760
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||||    
T  54430729 aattcctttcatgtttagaagttcttctgatt 54430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 21784599 - 21784530
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    ||||||||||||||| ||| |  |||||||||||||||||  || ||||||||||||  ||||||||||||    
T  21784599 ttacgttttattttactat-gacctattttaaaaagagagtcgaacctcctatttcagagggacggcccta 21784530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 23067613 - 23067579
Alignment:
Q  30 attcctttcatgtttagaagttcttctgattttga 64  Q
    ||||||||||||||||||| |||||||||||||||    
T  23067613 attcctttcatgtttagaacttcttctgattttga 23067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 46791514 - 46791451
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 162  Q
    ||||||||||||||| ||  || ||||||||||  |||||| |||||||||||||||| |||||||    
T  46791514 ttacgttttattttactaggggcctattttaaa--gagagccgagcctcctatttcacagggacgg 46791451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 54430817 - 54430862
Alignment:
Q  121 tattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||||||||||||| |||||||||| || |||||| ||||    
T  54430817 tattttaaaaagagagctgaacctcctattttacagggacgaccct 54430862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 29387563 - 29387511
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    |||||||||| || || ||||||||||||||||||  ||||||| ||||||||    
T  29387563 ttttattttactaaagatctattttaaaaagagagtcgagcctcatatttcac 29387511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 43905668 - 43905604
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||   ||||||||||||| ||||||  |||||||||||||||  |||||| ||||    
T  43905668 ttttattttattgggggtctattttaaatagagagtcgagcctcctatttcatagggacgaccct 43905604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 48626844 - 48626784
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 162  Q
    ||||||||||||  ||| |||||||||| ||||| | |||||||||||||||  |||||||    
T  48626844 ttttattttattgaaggcctattttaaatagagaaccgagcctcctatttcatagggacgg 48626784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 17022 - 16896
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| |||||| |||| |||        ||||||||||||||||||       ||||||||||||||||||  || ||||||||    
T  17022 aattcctttcatgtttagaacttcttcagattctgattttatttaatgaaatttagctacacaaaaaaattacgttttattttattaggggcctatttta 16923  T
Q  128 aaaagagagctgagcctcctatttcac 154  Q
    |||||||||| ||||||||||||||||    
T  16922 aaaagagagccgagcctcctatttcac 16896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 33910239 - 33910378
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    ||||||||||||||||||||||| |||| ||| |||         |||||| |||||||||||       ||||||||||||||| ||  || |||||||    
T  33910239 aattcctttcatgtttagaagttattcttattctgatttttttttaatgaagtttagctacacaaaaatattacgttttattttactaggggcctatttt 33910338  T
Q  127 aaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  33910339 aaaaagagagccgagcctcctatttcacagggacggccct 33910378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 12251176 - 12251034
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn----aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatt 124  Q
    |||||||||||||||||||||||||||||||| |||           ||||||||||||||||||       ||||||||||||||| || ||| |||||    
T  12251176 aattcctttcatgtttagaagttcttctgattctgatttttttttttaatgaaatttagctacacaaaaaaattacgttttattttactagaggcctatt 12251077  T
Q  125 ttaaaaa-gagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||| || ||  |||||||||||||||| |||||||||||    
T  12251076 ttaaaaaagatagtcgagcctcctatttcacagggacggccct 12251034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 44893847 - 44893778
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||||||  | ||||||||||||||||||  |||||||||||||||| | |||||||||    
T  44893847 ttacgttttattttattaaggatctattttaaaaagagagtcgagcctcctatttcacggagacggccct 44893778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 42161011 - 42160873
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    ||||||||||||||||||||||| |||||||| |||        ||||||||||| |||||        ||||||||||||||| ||  | |||||||||    
T  42161011 aattcctttcatgtttagaagttattctgattctgattttttttaatgaaatttaactacataaagatattacgttttattttactaaggatctatttta 42160912  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||  | ||||||||||||| |||||||||||    
T  42160911 aaaagagagcataacctcctatttcacagggacggccct 42160873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 18015469 - 18015360
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||| ||| |||        ||||||||||||||||||       ||||||||||||||||||  || ||||||||    
T  18015469 aattcctttcatgtttagaagttcttctaattctgattttttttaatgaaatttagctacacaaaaaaattacgttttattttattaggggcctatttta 18015370  T
Q  128 aaaagagagc 137  Q
    ||||||||||    
T  18015369 aaaagagagc 18015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 6379904 - 6379834
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    ||||||||||||||| ||| || ||||||||||||| |||| ||||||| |||||||| |||||| |||||    
T  6379904 ttacgttttattttactatgggcctattttaaaaagtgagccgagcctcatatttcacagggacgacccta 6379834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 4100205 - 4100261
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttca 153  Q
    ||||||||||||||| || || ||||||||||||||||||| || ||||||||||||    
T  4100205 ttacgttttattttactagagatctattttaaaaagagagccgaacctcctatttca 4100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 32957016 - 32957066
Alignment:
Q  101 gttttattttattataggtctattttaaaaagagagctgagcctcctattt 151  Q
    |||||||||||||  ||| ||||||||||||||||| ||||||||||||||    
T  32957016 gttttattttattggaggcctattttaaaaagagagttgagcctcctattt 32957066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 11672835 - 11672904
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| ||  ||||||||||||||||||| | || ||||| ||||||| |||| ||||||    
T  11672835 ttacgttttattttactaggggtctattttaaaaagagaaccgaacctccaatttcacggggatggccct 11672904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 36796191 - 36796134
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcac 154  Q
    |||| |||||||||| ||  | ||||||||||||||||||||||| ||||||||||||    
T  36796191 ttacattttattttactagggatctattttaaaaagagagctgagtctcctatttcac 36796134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 4100133 - 4100164
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||||    
T  4100133 aattcctttcatgtttagaagttcttctgatt 4100164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 44875956 - 44875910
Alignment:
Q  120 ctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||    
T  44875956 ctattttaaaaagagagtcgagcctcctatttcatagggacggccct 44875910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 773765 - 773736
Alignment:
Q  35 tttcatgtttagaagttcttctgattttga 64  Q
    ||||||||||||||||||||||||||||||    
T  773765 tttcatgtttagaagttcttctgattttga 773736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 1366258 - 1366323
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcccta 167  Q
    ||||||||||||   | ||||||||||| ||||||| |||||| ||||||||  ||||||||||||    
T  1366258 ttttattttattggggatctattttaaatagagagccgagccttctatttcatagggacggcccta 1366323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 26282347 - 26282283
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||   || |||||||||| || |||| |||||||||||||||  |||||||||||    
T  26282347 ttttattttattgggggcctattttaaatagtgagccgagcctcctatttcatagggacggccct 26282283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 1237 - 1375
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn-aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||| ||||||||||| |||        ||||||||||||||||||       ||||||||||||||| ||      |||||||    
T  1237 aattcctttcatgtttagaacttcttctgattctgattttttttaatgaaatttagctacacaaaaaaattacgttttattttactaggaacttatttta 1336  T
Q  128 aaaagagagctgagcctcctatttcactgggacggccct 166  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  1337 aaaagagagccgagcctcctatttcacggggacggccct 1375  T

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Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 2618529 - 2618666
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaa 128  Q
    |||| |||||||||||| |||||||||| ||| |||       ||||||||||| ||||||       ||||||||||||||| ||  || |||||||||    
T  2618529 aattgctttcatgtttaaaagttcttcttattctgatttttttaatgaaatttaactacacaaaaaaattacgttttattttactaggggcctattttaa 2618628  T
Q  129 aaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||| || |||||||||||||  ||||||||||    
T  2618629 aaagagagccgaacctcctatttcacatggacggccct 2618666  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 3514668 - 3514606
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttcactggga 159  Q
    ||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||| ||||    
T  3514668 ttacgttttattttactaagggtctattttaaaaagagagttgagcctcctatttcacaggga 3514606  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 22503963 - 22504044
Alignment:
Q  72 aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctattttaaaaagagagctgagcctcctatttca 153  Q
    ||||||||||||||||||       ||||||||||||||| |   ||||||||||||||||||| | |||||||||||||||    
T  22503963 aatgaaatttagctacacaaaaaaattacgttttattttactgagggtctattttaaaaagagaaccgagcctcctatttca 22504044  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 29401387 - 29401450
Alignment:
Q  101 gttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggcc 164  Q
    ||||||||||| ||  || |||||||||||||||||  |||||||||||||||| |||||||||    
T  29401387 gttttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacggggacggcc 29401450  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 31258365 - 31258322
Alignment:
Q  123 ttttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  31258365 ttttaaaaagagagccgagcctcctatttcacggggacggccct 31258322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 6360934 - 6361069
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga-----nnnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctat 123  Q
    |||||||||||||||||||||||||| |||||||||            ||||||||||||||||||       ||| ||||||||||| ||  |  ||||    
T  6360934 aattcctttcatgtttagaagttcttttgattttgattttttttttttaatgaaatttagctacacaaaaaagttatgttttattttactagggacctat 6361033  T
Q  124 tttaaaaagagagctgagcctcctatttcactggga 159  Q
    |||||||||||||| |||||| ||||||||| ||||    
T  6361034 tttaaaaagagagccgagccttctatttcacaggga 6361069  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 1092856 - 1092796
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacgg 162  Q
    ||||||||||||| ||| |||||||||| ||||| | |||||||||||||||  |||||||    
T  1092856 ttttattttattagaggcctattttaaatagagaaccgagcctcctatttcatagggacgg 1092796  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 29308282 - 29308218
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttcactgggacggccct 166  Q
    ||||||||||||   || |||||||||| ||||||| |||||||||||||||  |||||||||||    
T  29308282 ttttattttattgggggcctattttaaatagagagccgagcctcctatttcatggggacggccct 29308218  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 1690532 - 1690481
Alignment:
Q  102 ttttattttattataggtctattttaaaaagagagctgagcctcctatttca 153  Q
    ||||||||||||  ||| |||||||||| ||||||| |||||||||||||||    
T  1690532 ttttattttattggaggcctattttaaatagagagccgagcctcctatttca 1690481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Complemental strand, 12614607 - 12614576
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgatt 60  Q
    ||||||||||||||||||||||||||||||||    
T  12614607 aattcctttcatgtttagaagttcttctgatt 12614576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 11088836 - 11088869
Alignment:
Q  120 ctattttaaaaagagagctgagcctcctatttca 153  Q
    ||||||||||||||||| ||||||||||||||||    
T  11088836 ctattttaaaaagagagttgagcctcctatttca 11088869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 29149635 - 29149683
Alignment:
Q  97 ttacgttttattttattataggtctattttaaaaagagagctgagcctc 145  Q
    ||||||||||||||| || ||  |||||||||||||||||| |||||||    
T  29149635 ttacgttttattttactagagacctattttaaaaagagagccgagcctc 29149683  T

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Target: scaffold0126 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 16885 - 17019
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttgannnnnnn--aatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttt 126  Q
    |||||||||||||||||||| ||||||||||| | |         ||||||||||||||||||       ||||||| ||||||| ||  || |||||||    
T  16885 aattcctttcatgtttagaacttcttctgattctaatttttttttaatgaaatttagctacacaaaaaaattacgttatattttactaggggcctatttt 16984  T
Q  127 aaaaagagagctgagcctcctatttcactgggacg 161  Q
    |||||||||| ||||||||||||||||| ||||||    
T  16985 aaaaagagagttgagcctcctatttcacggggacg 17019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 22694 - 22588
Alignment:
Q  29 aattcctttcatgtttagaagttcttctgattttga-nnnnnnnaatgaaatttagctacacnnnnnnnttacgttttattttattataggtctatttta 127  Q
    |||||||||||||||||||||||||||||||| |||        ||| ||||||||||||||       ||||||||||||||| ||| ||  |||||||    
T  22694 aattcctttcatgtttagaagttcttctgattctgattttttttaataaaatttagctacacaaaaaaattacgttttattttactatgggcttatttta 22595  T
Q  128 aaaagag 134  Q
    |||||||    
T  22594 aaaagag 22588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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