View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20736_high_29 (Length: 237)
Name: NF20736_high_29
Description: NF20736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20736_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 45 - 202
Target Start/End: Complemental strand, 42972673 - 42972516
Alignment:
| Q |
45 |
ccaaatagagccgtgcgtaatatagtaccttagaaattcgcaggactatcatccaattgtttttcgttttctatgtcaacctctaaaatctcctgaaatc |
144 |
Q |
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| T |
42972673 |
ccaaatagagccgtgcgtaatatagtaccttagaaattcgcaggactatcatccaattgtttttcgttttctatgtcaacctctaaaatctcctgaaatc |
42972574 |
T |
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| Q |
145 |
aaaacataaaaactgaacaagttttgtaatcttgaaggttgctttaacaatttggatt |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42972573 |
aaaacataaaaactgaacaagttttgtaatcttgaaggttgctttaacaatttggatt |
42972516 |
T |
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