View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20736_low_22 (Length: 253)
Name: NF20736_low_22
Description: NF20736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20736_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26425447 - 26425218
Alignment:
| Q |
1 |
aaaattcaaggttaggtggaagtagtgaagaaggggttattcattttcaacaagtaaaataagattgcaaattcatgcaaactattatttgctttcatat |
100 |
Q |
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| T |
26425447 |
aaaattcaaggttaggtggaagtagtgaagaagggtttattcattttcaacaagtaaaataagattgcaagttcatgcaaactattatttgctttcatat |
26425348 |
T |
|
| Q |
101 |
tttttgtttctccaagaatttgatcacttaaccttctctaaagaaagaaaactataaagtgtactagaagtaaacatttagaggatctctaatattgaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26425347 |
tttttgtttctccaagaatttgatcacttaaccttctctaaagaaagaaaactataaagtgtactagaagtaaacatttagaggatctctaatattgaat |
26425248 |
T |
|
| Q |
201 |
actatgagattttgttaatttctttttatt |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
26425247 |
actatgagattttgttaatttctttttatt |
26425218 |
T |
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