View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20736_low_4 (Length: 453)

Name: NF20736_low_4
Description: NF20736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20736_low_4
NF20736_low_4
[»] chr3 (5 HSPs)
chr3 (89-436)||(42084813-42085165)
chr3 (10-90)||(42085219-42085299)
chr3 (126-190)||(21127742-21127807)
chr3 (126-190)||(43291871-43291936)
chr3 (118-198)||(34935729-34935809)
[»] chr5 (4 HSPs)
chr5 (110-198)||(12974244-12974332)
chr5 (117-200)||(40579681-40579764)
chr5 (117-171)||(38274991-38275045)
chr5 (126-190)||(17537469-17537537)
[»] chr8 (1 HSPs)
chr8 (117-199)||(33802582-33802664)
[»] chr1 (6 HSPs)
chr1 (117-199)||(47490277-47490359)
chr1 (117-198)||(25948200-25948281)
chr1 (115-201)||(5298749-5298835)
chr1 (126-190)||(2736182-2736247)
chr1 (126-190)||(39959850-39959915)
chr1 (126-190)||(1076197-1076262)
[»] chr7 (10 HSPs)
chr7 (118-198)||(42617403-42617483)
chr7 (126-190)||(28545504-28545569)
chr7 (126-190)||(28549919-28549984)
chr7 (126-190)||(28556087-28556152)
chr7 (126-190)||(47958511-47958576)
chr7 (126-190)||(48253863-48253928)
chr7 (126-190)||(24142897-24142962)
chr7 (137-190)||(36977679-36977732)
chr7 (126-189)||(2415883-2415947)
chr7 (145-190)||(46961385-46961430)
[»] scaffold0648 (1 HSPs)
scaffold0648 (117-198)||(7745-7826)
[»] chr4 (7 HSPs)
chr4 (117-198)||(43930110-43930191)
chr4 (126-190)||(33075804-33075869)
chr4 (126-189)||(55899070-55899134)
chr4 (126-190)||(228867-228935)
chr4 (126-190)||(240412-240480)
chr4 (136-186)||(42678844-42678894)
chr4 (126-190)||(47819298-47819366)
[»] chr2 (1 HSPs)
chr2 (126-190)||(36011894-36011959)
[»] chr6 (1 HSPs)
chr6 (126-189)||(30809870-30809934)


Alignment Details
Target: chr3 (Bit Score: 291; Significance: 1e-163; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 89 - 436
Target Start/End: Complemental strand, 42085165 - 42084813
Alignment:
Q  89 gtataaaagatcagacaa-ataatcagcaaagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcc 187  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42085165 gtataaaatatcagacgacataatcagcaaagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcc 42085066  T
Q  188 cacagctgtcaattannnnnnncattttcttattcataatattaaactattttctt----aatcgacaaaactgatccataacagttagttaccaccaca 283  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  42085065 cacagctgtcaattatttttttcattttcttattcataatattaaactattttctttcttaatcgacaaaactgatccataacagttagttaccaccaca 42084966  T
Q  284 caacgaattaactaccaaaactgattttgtgttatgttacataacaataacaatggcactctcatcttgctgcagttttgttgttggttcctcaaacatt 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42084965 caacgaattaactaccaaaactgattttgtgttatgttacataacaataacaatggcactctcatcttgctgcagttttgttgtttgttcctcaaacatt 42084866  T
Q  384 aacaaccctttaccatcttttcctttcaaattcccttccctatggccatccac 436  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42084865 aacaaccctttaccatcttttactttcaaattcccttccctatggccatccac 42084813  T

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Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 42085299 - 42085219
Alignment:
Q  10 aagaaaatagtataccgatttatttcactgttatttctattatggtgtgtactttttctccaagattcaacaagttacggt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42085299 aagaaaatagtataccgatttatttcactgttatttctattatggtgtgtactttttctccaagattcaacaacttacggt 42085219  T

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Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 21127807 - 21127742
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  21127807 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 21127742  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 43291936 - 43291871
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  43291936 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 43291871  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 34935729 - 34935809
Alignment:
Q  118 agacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 198  Q
    |||| |||||||| |||||||||||||  ||||||||||||| |||  ||||||||||||||||||||| |||||| ||||    
T  34935729 agacggtttggccaagtggtctaaggcatcagatttaggctccggtttgaaagggcgtgggttcaaatctcacagccgtca 34935809  T

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Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 12974244 - 12974332
Alignment:
Q  110 atcagcaaagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 198  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12974244 atcaacaaagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 12974332  T

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Target: chr5; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 40579681 - 40579764
Alignment:
Q  117 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtcaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40579681 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtcaat 40579764  T

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Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 38275045 - 38274991
Alignment:
Q  117 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagg 171  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38275045 aagacagtttggccgagtggtctacggcgccagatttaggctctggtccgaaagg 38274991  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 17537469 - 17537537
Alignment:
Q  126 tggccgagtggtctaaggcgccagatttaggctctggtc--cgaa--agggcgtgggttcaaatcccac 190  Q
    ||||||||||||||||||||||||| | | | |||||||  ||||  ||||||||||||||||||||||    
T  17537469 tggccgagtggtctaaggcgccagactcaagttctggtcttcgaaagagggcgtgggttcaaatcccac 17537537  T

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Target: chr8 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 33802664 - 33802582
Alignment:
Q  117 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtcaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33802664 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtcaa 33802582  T

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Target: chr1 (Bit Score: 83; Significance: 4e-39; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 47490359 - 47490277
Alignment:
Q  117 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtcaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47490359 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtcaa 47490277  T

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Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 25948200 - 25948281
Alignment:
Q  117 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25948200 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 25948281  T

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Target: chr1; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 5298749 - 5298835
Alignment:
Q  115 caaagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtcaatt 201  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5298749 caaagacggtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagccgtcaatt 5298835  T

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Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 2736182 - 2736247
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  2736182 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 2736247  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 39959850 - 39959915
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  39959850 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 39959915  T

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Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 1076197 - 1076262
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||    
T  1076197 tggccgagttggtctaaggcgtcagattaaggttctggtccgaaagggcgtgggttcaaatcccac 1076262  T

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Target: chr7 (Bit Score: 81; Significance: 6e-38; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 42617483 - 42617403
Alignment:
Q  118 agacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42617483 agacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 42617403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 28545504 - 28545569
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  28545504 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 28545569  T

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Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 28549919 - 28549984
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  28549919 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 28549984  T

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Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 28556087 - 28556152
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  28556087 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 28556152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 47958576 - 47958511
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  47958576 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 47958511  T

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Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 48253863 - 48253928
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  48253863 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 48253928  T

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Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 24142962 - 24142897
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||| |||| |||||||||||||||||    
T  24142962 tggccgagttggtctaaggcgccagattaaggttctggtccgatagggtgtgggttcaaatcccac 24142897  T

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Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 36977732 - 36977679
Alignment:
Q  137 tctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    |||||||||  ||||||||||||||| | |||||||| ||||||||||||||||    
T  36977732 tctaaggcgttagatttaggctctggcctgaaagggcatgggttcaaatcccac 36977679  T

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Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 2415883 - 2415947
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatccca 189  Q
    ||||||||| ||||||||||||||| || |||  ||||||||||||||| ||||||| |||||||    
T  2415883 tggccgagttggtctaaggcgccagtttcaggtactggtccgaaagggcatgggttcgaatccca 2415947  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 46961385 - 46961430
Alignment:
Q  145 gccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    |||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  46961385 gccagattaaggttctggtctgaaaaggcgtgggttcaaatcccac 46961430  T

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Target: scaffold0648 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 7826 - 7745
Alignment:
Q  117 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7826 aagacggtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagccgtca 7745  T

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Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 43930191 - 43930110
Alignment:
Q  117 aagacagtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagctgtca 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43930191 aagacggtttggccgagtggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccacagccgtca 43930110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 33075804 - 33075869
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  33075804 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 33075869  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 55899134 - 55899070
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatccca 189  Q
    ||||||||| ||||||||||||||| || |||  ||||||||||||||| ||||||| |||||||    
T  55899134 tggccgagttggtctaaggcgccagtttcaggtactggtccgaaagggcatgggttcgaatccca 55899070  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 228867 - 228935
Alignment:
Q  126 tggccgagtggtctaaggcgccagatttaggctctggtc--cgaa--agggcgtgggttcaaatcccac 190  Q
    ||||||||||||||||||||||||| | | | |||||||  ||||  ||||||||||||||||||||||    
T  228867 tggccgagtggtctaaggcgccagactcaagttctggtcttcgaaagagggcgtgggttcaaatcccac 228935  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 240412 - 240480
Alignment:
Q  126 tggccgagtggtctaaggcgccagatttaggctctggtc--cgaa--agggcgtgggttcaaatcccac 190  Q
    ||||||||||||||||||||||||| | | | |||||||  ||||  ||||||||||||||||||||||    
T  240412 tggccgagtggtctaaggcgccagactcaagttctggtcttcgaaagagggcgtgggttcaaatcccac 240480  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 42678894 - 42678844
Alignment:
Q  136 gtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatc 186  Q
    ||||||||||||||||| ||| ||| |||||||||||||||  ||||||||    
T  42678894 gtctaaggcgccagattaaggttctcgtccgaaagggcgtgaattcaaatc 42678844  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 47819366 - 47819298
Alignment:
Q  126 tggccgagtggtctaaggcgccagatttaggctctggtc--cgaa--agggcgtgggttcaaatcccac 190  Q
    ||||||||||||||||||||||||| | | | |||||||  ||||  ||||||||||||||||||||||    
T  47819366 tggccgagtggtctaaggcgccagactcaagttctggtcttcgaaagagggcgtgggttcaaatcccac 47819298  T

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Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 36011894 - 36011959
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatcccac 190  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  36011894 tggccgagttggtctaaggcgccagattaaggttctggtccgaaagggcgtgggttcaaatcccac 36011959  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 30809934 - 30809870
Alignment:
Q  126 tggccgagt-ggtctaaggcgccagatttaggctctggtccgaaagggcgtgggttcaaatccca 189  Q
    ||||||||| ||||||||||||||| || |||  ||||||||||||||| ||||||| |||||||    
T  30809934 tggccgagttggtctaaggcgccagtttcaggtactggtccgaaagggcatgggttcgaatccca 30809870  T

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