View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20738_low_8 (Length: 242)
Name: NF20738_low_8
Description: NF20738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20738_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7500168 - 7499929
Alignment:
| Q |
1 |
ccgctggaaaggtggaggagatcggttgtacgtgaggattgttgagtttggaatagagcgtatgaccggagaactggggaggcaagctggcattaatctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
7500168 |
ccgctggaaaggtggaggagatcggttgtacgtgaggattgttgtgtttggaatagagcatatgaccggagaactggggaggcaagctggcattaatctc |
7500069 |
T |
|
| Q |
101 |
gtgaatgcaattcaaaatggagagaggattatatttgattgaaaaggtttataccaattcttaaatatttcatttaaatctactaggttttcatggttag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
7500068 |
gtgaatgcaattcaaaatggagagaggattatatttgattgaaaaggtttataccaatttttaaatatttcatttaaatctactaggttttcatggttag |
7499969 |
T |
|
| Q |
201 |
aacaattgtggtaattggattggatgtgttttccttcttc |
240 |
Q |
| |
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|||||||||||||||||||||||||||||||| ||||||| |
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| T |
7499968 |
aacaattgtggtaattggattggatgtgttttacttcttc |
7499929 |
T |
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