View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20739_high_6 (Length: 541)

Name: NF20739_high_6
Description: NF20739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20739_high_6
NF20739_high_6
[»] chr5 (8 HSPs)
chr5 (57-487)||(15676605-15677037)
chr5 (1-56)||(7440257-7440312)
chr5 (1-34)||(25701220-25701253)
chr5 (1-32)||(9737621-9737652)
chr5 (1-56)||(3631585-3631640)
chr5 (1-34)||(13013053-13013086)
chr5 (1-34)||(13084441-13084474)
chr5 (1-34)||(26525028-26525061)
[»] chr3 (11 HSPs)
chr3 (1-62)||(29125815-29125876)
chr3 (1-57)||(11231931-11231987)
chr3 (1-34)||(12251307-12251340)
chr3 (1-34)||(44205625-44205658)
chr3 (1-34)||(1092677-1092710)
chr3 (1-34)||(25246137-25246170)
chr3 (1-34)||(28952191-28952224)
chr3 (1-30)||(32270722-32270751)
chr3 (1-30)||(44254404-44254433)
chr3 (1-34)||(50527433-50527466)
chr3 (1-34)||(52202308-52202341)
[»] chr8 (14 HSPs)
chr8 (1-57)||(24796830-24796886)
chr8 (1-34)||(1098384-1098417)
chr8 (1-34)||(2317388-2317421)
chr8 (1-34)||(7242435-7242468)
chr8 (1-34)||(28565211-28565244)
chr8 (1-34)||(28572834-28572867)
chr8 (1-57)||(4698133-4698189)
chr8 (1-56)||(41837732-41837787)
chr8 (1-56)||(43117676-43117731)
chr8 (1-34)||(6317203-6317236)
chr8 (1-34)||(21435166-21435199)
chr8 (1-34)||(34934284-34934317)
chr8 (1-34)||(38567434-38567467)
chr8 (1-34)||(41388332-41388365)
[»] chr7 (10 HSPs)
chr7 (1-57)||(26874029-26874085)
chr7 (1-56)||(36358087-36358142)
chr7 (1-56)||(44143087-44143142)
chr7 (1-32)||(43859417-43859448)
chr7 (1-57)||(46028006-46028062)
chr7 (1-56)||(8461912-8461967)
chr7 (1-56)||(45350377-45350432)
chr7 (1-34)||(31065422-31065455)
chr7 (1-30)||(31931827-31931856)
chr7 (1-29)||(39976647-39976675)
[»] chr4 (10 HSPs)
chr4 (1-57)||(31663943-31663999)
chr4 (1-56)||(16925432-16925487)
chr4 (1-56)||(31581527-31581582)
chr4 (1-56)||(45670211-45670266)
chr4 (1-34)||(12700367-12700400)
chr4 (1-34)||(52581783-52581816)
chr4 (1-56)||(11650743-11650798)
chr4 (1-34)||(36584749-36584782)
chr4 (1-34)||(38141356-38141389)
chr4 (1-30)||(51001688-51001717)
[»] chr2 (14 HSPs)
chr2 (1-57)||(1114814-1114870)
chr2 (1-56)||(38763981-38764036)
chr2 (1-34)||(1020867-1020900)
chr2 (1-34)||(6749805-6749838)
chr2 (1-34)||(28745303-28745336)
chr2 (1-34)||(36435981-36436014)
chr2 (1-32)||(23869989-23870020)
chr2 (1-56)||(12995292-12995347)
chr2 (1-56)||(34494366-34494421)
chr2 (1-56)||(41699394-41699449)
chr2 (1-30)||(19283847-19283876)
chr2 (1-34)||(22674652-22674685)
chr2 (1-34)||(26293486-26293519)
chr2 (1-34)||(34983602-34983635)
[»] chr1 (19 HSPs)
chr1 (1-57)||(40567292-40567348)
chr1 (1-57)||(44052234-44052290)
chr1 (1-64)||(23177668-23177731)
chr1 (1-56)||(24542556-24542611)
chr1 (1-56)||(29170268-29170323)
chr1 (1-34)||(29981505-29981538)
chr1 (1-34)||(37126019-37126052)
chr1 (1-34)||(51140012-51140045)
chr1 (1-56)||(25298864-25298919)
chr1 (1-34)||(6850078-6850111)
chr1 (1-34)||(8530415-8530448)
chr1 (1-30)||(17285095-17285124)
chr1 (1-30)||(33011859-33011888)
chr1 (1-30)||(37343200-37343229)
chr1 (1-34)||(40428579-40428612)
chr1 (1-34)||(44317779-44317812)
chr1 (1-30)||(46224564-46224593)
chr1 (1-34)||(47562053-47562086)
chr1 (1-34)||(48708215-48708248)
[»] chr6 (9 HSPs)
chr6 (1-56)||(8560753-8560808)
chr6 (1-34)||(11450304-11450337)
chr6 (1-34)||(23258753-23258786)
chr6 (1-34)||(34023341-34023374)
chr6 (1-30)||(2660641-2660670)
chr6 (5-34)||(7022147-7022176)
chr6 (1-34)||(12698820-12698853)
chr6 (1-34)||(15469415-15469448)
chr6 (1-34)||(24130043-24130076)


Alignment Details
Target: chr5 (Bit Score: 342; Significance: 0; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 57 - 487
Target Start/End: Original strand, 15676605 - 15677037
Alignment:
Q  57 aatatatccatcgtctttgattctccatcaaccaaacgttatatcaccattgttattataatgactttcgatacaaggagtccatgtgatcatcggatct 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  15676605 aatatatccatcgtctttgattctccatcaaccaaacgttatatcaccattgttattataatgactttcgatacaaggagtccatatgatcatcgggtct 15676704  T
Q  157 gatatcaatgttggatcatagagaagtctaatggatacatttggctttaataactacataaggtggaattggatatcatatcttaaccaaaaaattaaga 256  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  15676705 gatatcaatgttgggtcatagagaagtctgatggatacatttgactttaataactacataaggtgcaattggatattatatcttaaccaaaaaattaaga 15676804  T
Q  257 tatttgtatacgagcaatctcatttatatattgttcaacatatacnnnnnnncacatttaatatgagactcttactcacacttgatataccaaaaatata 356  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||||     
T  15676805 tatttgtatatgagtaatctcatttatatattgttcaacatatac-ttttttcacatttaataagagactcttactcacacttgatataccaaaaatatt 15676903  T
Q  357 ataatatttttgcaaagtacctaaactcactattactccatgccaaagatccattgacaccatcgaattt---cgactatttattttatttatttcaatg 453  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||    
T  15676904 attatatttttgcaaagtacctaaactcactattactccatgccaaagatccattgacaccatcgaatttcaactactatttattttatttatttcaatg 15677003  T
Q  454 gctcatattagttttctcaactaactcacacgat 487  Q
    ||||||||||||||||||||||||||||||||||    
T  15677004 gctcatattagttttctcaactaactcacacgat 15677037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7440312 - 7440257
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  7440312 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 7440257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25701253 - 25701220
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  25701253 tttcaatagttaattttagtggcccaccctgaca 25701220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9737652 - 9737621
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctga 32  Q
    ||||||||||||||||||||||||||||||||    
T  9737652 tttcaatagttaattttagtggcccaccctga 9737621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3631585 - 3631640
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||    
T  3631585 tttcaatagttaattttagtggtccaccctgacatttttttctggctccgccactg 3631640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13013086 - 13013053
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  13013086 tttcaatagttaattttagtggtccaccctgaca 13013053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13084474 - 13084441
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  13084474 tttcaatagttaattttagtggtccaccctgaca 13084441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26525061 - 26525028
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||| |||||||||||||||||||||||||    
T  26525061 tttcaataattaattttagtggcccaccctgaca 26525028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29125876 - 29125815
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactgaatata 62  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  29125876 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactgaatata 29125815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11231987 - 11231931
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  11231987 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactga 11231931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12251340 - 12251307
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12251340 tttcaatagttaattttagtggcccaccctgaca 12251307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44205625 - 44205658
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  44205625 tttcaatagttaattttagtggcccaccctgaca 44205658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1092710 - 1092677
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  1092710 tttcaatggttaattttagtggcccaccctgaca 1092677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25246170 - 25246137
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  25246170 tttcaatagttaattttagtggcccacactgaca 25246137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28952224 - 28952191
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  28952224 tttcaatagttaattttagtggtccaccctgaca 28952191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 32270751 - 32270722
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  32270751 tttcaatagttaattttagtggcccaccct 32270722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 44254433 - 44254404
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  44254433 tttcaatagttaattttagtggcccaccct 44254404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 50527466 - 50527433
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  50527466 tttcaatagttaattttagtggcccactctgaca 50527433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 52202308 - 52202341
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||| |||||||||||||||||||||||||||    
T  52202308 tttcaaaagttaattttagtggcccaccctgaca 52202341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24796886 - 24796830
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  24796886 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactga 24796830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1098384 - 1098417
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1098384 tttcaatagttaattttagtggcccaccctgaca 1098417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2317388 - 2317421
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2317388 tttcaatagttaattttagtggcccaccctgaca 2317421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7242468 - 7242435
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  7242468 tttcaatagttaattttagtggcccaccctgaca 7242435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28565211 - 28565244
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28565211 tttcaatagttaattttagtggcccaccctgaca 28565244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28572834 - 28572867
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28572834 tttcaatagttaattttagtggcccaccctgaca 28572867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4698133 - 4698189
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    |||||||||||||||||||||||||||||| |||       ||||||||||||||||    
T  4698133 tttcaatagttaattttagtggcccaccctaacatttttttctggctccgccactga 4698189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41837787 - 41837732
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||    
T  41837787 tttcaatagttaattttagtggtccaccctgacatttttttctggctccgccactg 41837732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43117676 - 43117731
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||    
T  43117676 tttcaatagttaattttagtggtccaccctgacatttttttctggctccgccactg 43117731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6317203 - 6317236
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  6317203 tttcaatagttacttttagtggcccaccctgaca 6317236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21435166 - 21435199
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||||||| |||||||    
T  21435166 tttcaatagttaattttagtggcccatcctgaca 21435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34934317 - 34934284
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  34934317 tttcaatagttaattttagtggtccaccctgaca 34934284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 38567434 - 38567467
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  38567434 tttcaatagttaattttagtggtccaccctgaca 38567467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41388332 - 41388365
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  41388332 tttcaatagttaattttagtggtccaccctgaca 41388365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26874029 - 26874085
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  26874029 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactga 26874085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36358142 - 36358087
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  36358142 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 36358087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44143087 - 44143142
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  44143087 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 44143142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43859417 - 43859448
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctga 32  Q
    ||||||||||||||||||||||||||||||||    
T  43859417 tttcaatagttaattttagtggcccaccctga 43859448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46028006 - 46028062
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    |||||||||||||||||||||||||||||| |||       ||||||||||||||||    
T  46028006 tttcaatagttaattttagtggcccaccctaacatgtttttctggctccgccactga 46028062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8461912 - 8461967
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||||||||||| |||       |||||||||||||||    
T  8461912 tttcaatagttaattttagtggcccaccctaacatttttttctggctccgccactg 8461967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45350377 - 45350432
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||||||||||| |||       |||||||||||||||    
T  45350377 tttcaatagttaattttagtggcccaccctaacatttttttctggctccgccactg 45350432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31065455 - 31065422
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  31065455 tttcaatagttaattttagtggcccactctgaca 31065422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 31931856 - 31931827
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  31931856 tttcaatagttaattttagtggcccaccct 31931827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 39976647 - 39976675
Alignment:
Q  1 tttcaatagttaattttagtggcccaccc 29  Q
    |||||||||||||||||||||||||||||    
T  39976647 tttcaatagttaattttagtggcccaccc 39976675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31663999 - 31663943
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  31663999 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactga 31663943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16925432 - 16925487
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  16925432 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 16925487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31581582 - 31581527
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  31581582 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 31581527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45670211 - 45670266
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  45670211 tttcaatagttaattttagtggcccaccctgacacttttttctggctccgccactg 45670266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12700400 - 12700367
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12700400 tttcaatagttaattttagtggcccaccctgaca 12700367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 52581783 - 52581816
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  52581783 tttcaatagttaattttagtggcccaccctgaca 52581816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11650798 - 11650743
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||    
T  11650798 tttcaatagttaattttagtggtccaccctgacatttttttctggctccgccactg 11650743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36584749 - 36584782
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||||| |||||||||    
T  36584749 tttcaatagttaattttagtggcctaccctgaca 36584782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 38141389 - 38141356
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||||| |||||||||    
T  38141389 tttcaatagttaattttagtggcctaccctgaca 38141356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 51001688 - 51001717
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  51001688 tttcaatagttaattttagtggcccaccct 51001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1114870 - 1114814
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  1114870 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactga 1114814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38763981 - 38764036
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  38763981 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 38764036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1020900 - 1020867
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1020900 tttcaatagttaattttagtggcccaccctgaca 1020867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6749838 - 6749805
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  6749838 tttcaatagttaattttagtggcccaccctgaca 6749805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28745336 - 28745303
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28745336 tttcaatagttaattttagtggcccaccctgaca 28745303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36436014 - 36435981
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36436014 tttcaatagttaattttagtggcccaccctgaca 36435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 23869989 - 23870020
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctga 32  Q
    ||||||||||||||||||||||||||||||||    
T  23869989 tttcaatagttaattttagtggcccaccctga 23870020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12995292 - 12995347
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||||||||||| |||       |||||||||||||||    
T  12995292 tttcaatagttaattttagtggcccaccctaacatttttttctggctccgccactg 12995347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34494421 - 34494366
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||    
T  34494421 tttcaatagttaattttagtggtccaccctgacatttttttctggctccgccactg 34494366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41699394 - 41699449
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||| ||||       |||||||||||||||    
T  41699394 tttcaatagttaattttagtggcccacccagacatttttttctggctccgccactg 41699449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19283876 - 19283847
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  19283876 tttcaatagttaattttagtggcccaccct 19283847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22674685 - 22674652
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  22674685 tttcaatagttaattttagtggtccaccctgaca 22674652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26293486 - 26293519
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  26293486 tttcaatagttaattttagtggcccacccagaca 26293519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34983602 - 34983635
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  34983602 tttcaatagttaatttttgtggcccaccctgaca 34983635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40567292 - 40567348
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  40567292 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactga 40567348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44052290 - 44052234
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactga 57  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  44052290 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactga 44052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23177668 - 23177731
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactgaatatatc 64  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||  |||||||    
T  23177668 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactatatatatc 23177731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24542611 - 24542556
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  24542611 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 24542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29170268 - 29170323
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  29170268 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 29170323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29981538 - 29981505
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  29981538 tttcaatagttaattttagtggcccaccctgaca 29981505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37126019 - 37126052
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  37126019 tttcaatagttaattttagtggcccaccctgaca 37126052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 51140012 - 51140045
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  51140012 tttcaatagttaattttagtggcccaccctgaca 51140045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25298919 - 25298864
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||    
T  25298919 tttcaatagttaattttagtggtccaccctgacatttttttctggctccgccactg 25298864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6850078 - 6850111
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||| |||||||||||||||||||||||||    
T  6850078 tttcaataattaattttagtggcccaccctgaca 6850111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8530415 - 8530448
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||| |||||||||||||||||||||||||||    
T  8530415 tttcaaaagttaattttagtggcccaccctgaca 8530448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 17285124 - 17285095
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  17285124 tttcaatagttaattttagtggcccaccct 17285095  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33011888 - 33011859
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  33011888 tttcaatagttaattttagtggcccaccct 33011859  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 37343200 - 37343229
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  37343200 tttcaatagttaattttagtggcccaccct 37343229  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40428612 - 40428579
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  40428612 tttcaatagttaattttagtggtccaccctgaca 40428579  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44317779 - 44317812
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  44317779 tttcaatagttaattttagtggcccaccttgaca 44317812  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 46224593 - 46224564
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  46224593 tttcaatagttaattttagtggcccaccct 46224564  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47562053 - 47562086
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  47562053 tttcaatagttaattttagtggctcaccctgaca 47562086  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48708248 - 48708215
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  48708248 tttcaatagttaattttagtggtccaccctgaca 48708215  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8560753 - 8560808
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgacannnnnnnctggctccgccactg 56  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  8560753 tttcaatagttaattttagtggcccaccctgacatttttttctggctccgccactg 8560808  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11450337 - 11450304
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11450337 tttcaatagttaattttagtggcccaccctgaca 11450304  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23258786 - 23258753
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  23258786 tttcaatagttaattttagtggcccaccctgaca 23258753  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34023374 - 34023341
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  34023374 tttcaatagttaattttagtggcccaccctgaca 34023341  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 2660670 - 2660641
Alignment:
Q  1 tttcaatagttaattttagtggcccaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  2660670 tttcaatagttaattttagtggcccaccct 2660641  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 7022147 - 7022176
Alignment:
Q  5 aatagttaattttagtggcccaccctgaca 34  Q
    ||||||||||||||||||||||||||||||    
T  7022147 aatagttaattttagtggcccaccctgaca 7022176  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12698820 - 12698853
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  12698820 tttcaatagttaattttagtggtccaccctgaca 12698853  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15469415 - 15469448
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||| |||||||||||||||||||||||||||    
T  15469415 tttcaaaagttaattttagtggcccaccctgaca 15469448  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24130076 - 24130043
Alignment:
Q  1 tttcaatagttaattttagtggcccaccctgaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  24130076 tttcaatagttaattttagtggtccaccctgaca 24130043  T

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