View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2073_low_14 (Length: 276)

Name: NF2073_low_14
Description: NF2073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2073_low_14
NF2073_low_14
[»] chr1 (74 HSPs)
chr1 (19-260)||(29136317-29136558)
chr1 (19-238)||(13548879-13549098)
chr1 (19-238)||(47255216-47255438)
chr1 (19-255)||(11348768-11349006)
chr1 (19-239)||(31925585-31925805)
chr1 (19-262)||(37876621-37876864)
chr1 (25-260)||(37168374-37168606)
chr1 (26-260)||(28242382-28242616)
chr1 (33-262)||(37032924-37033156)
chr1 (25-252)||(47115248-47115475)
chr1 (19-238)||(13546972-13547187)
chr1 (23-239)||(42297850-42298069)
chr1 (25-247)||(7482100-7482322)
chr1 (19-193)||(19754565-19754737)
chr1 (23-117)||(8550787-8550881)
chr1 (19-117)||(13316352-13316450)
chr1 (23-127)||(193685-193788)
chr1 (25-117)||(3189406-3189498)
chr1 (25-117)||(3198223-3198315)
chr1 (25-117)||(3207062-3207154)
chr1 (19-114)||(20762742-20762837)
chr1 (19-157)||(834129-834265)
chr1 (19-117)||(28220227-28220324)
chr1 (33-260)||(34603661-34603874)
chr1 (35-117)||(51765483-51765565)
chr1 (19-117)||(3156935-3157032)
chr1 (35-117)||(9987287-9987369)
chr1 (35-117)||(20622237-20622319)
chr1 (19-117)||(28223422-28223519)
chr1 (19-117)||(28265555-28265652)
chr1 (35-117)||(40282463-40282545)
chr1 (20-117)||(13659337-13659433)
chr1 (19-197)||(19752756-19752930)
chr1 (18-117)||(45644355-45644453)
chr1 (19-117)||(31659308-31659405)
chr1 (19-117)||(49918420-49918517)
chr1 (23-128)||(23555256-23555359)
chr1 (23-112)||(44455234-44455322)
chr1 (35-114)||(21054044-21054123)
chr1 (19-157)||(3847083-3847219)
chr1 (19-117)||(4552638-4552735)
chr1 (35-117)||(9036502-9036584)
chr1 (40-117)||(44203722-44203800)
chr1 (27-117)||(46064996-46065085)
chr1 (19-117)||(50167176-50167273)
chr1 (19-157)||(16455691-16455825)
chr1 (23-94)||(1833596-1833667)
chr1 (23-127)||(15820381-15820484)
chr1 (35-127)||(36683766-36683857)
chr1 (26-97)||(37503577-37503648)
chr1 (19-117)||(37559868-37559966)
chr1 (23-110)||(50169218-50169304)
chr1 (23-157)||(196869-197002)
chr1 (46-163)||(2926606-2926724)
chr1 (25-206)||(6808528-6808710)
chr1 (19-117)||(13137977-13138074)
chr1 (19-117)||(30476447-30476544)
chr1 (25-123)||(22079392-22079491)
chr1 (19-93)||(41360984-41361058)
chr1 (29-124)||(5459985-5460081)
chr1 (49-126)||(8871054-8871130)
chr1 (23-117)||(40122197-40122292)
chr1 (178-238)||(194750-194810)
chr1 (19-123)||(927971-928074)
chr1 (19-188)||(9109347-9109518)
chr1 (23-117)||(10925297-10925393)
chr1 (19-128)||(37282681-37282790)
chr1 (25-93)||(13938213-13938281)
chr1 (40-126)||(2262965-2263051)
chr1 (46-128)||(44646794-44646875)
chr1 (46-128)||(44650152-44650233)
chr1 (19-123)||(3460766-3460869)
chr1 (73-117)||(15916626-15916670)
chr1 (73-117)||(31422863-31422906)
[»] chr3 (76 HSPs)
chr3 (19-262)||(6095455-6095697)
chr3 (19-262)||(46860544-46860787)
chr3 (25-262)||(49199320-49199561)
chr3 (33-262)||(43401652-43401885)
chr3 (33-262)||(43403595-43403828)
chr3 (19-260)||(54593774-54594017)
chr3 (25-262)||(41819380-41819614)
chr3 (19-260)||(55301827-55302070)
chr3 (19-239)||(30236195-30236415)
chr3 (23-197)||(40913367-40913544)
chr3 (23-197)||(4570026-4570202)
chr3 (19-117)||(9581352-9581450)
chr3 (25-260)||(36018929-36019159)
chr3 (25-117)||(7762341-7762433)
chr3 (19-212)||(46173427-46173621)
chr3 (19-117)||(19683889-19683987)
chr3 (19-117)||(45095233-45095331)
chr3 (19-235)||(47304321-47304543)
chr3 (23-117)||(34491286-34491379)
chr3 (19-117)||(37408528-37408626)
chr3 (19-117)||(23197939-23198037)
chr3 (19-117)||(23200138-23200236)
chr3 (25-117)||(7764540-7764632)
chr3 (35-117)||(801178-801260)
chr3 (19-117)||(5258144-5258242)
chr3 (19-117)||(9636126-9636224)
chr3 (19-117)||(5260323-5260421)
chr3 (35-117)||(7780004-7780086)
chr3 (19-117)||(29196387-29196484)
chr3 (20-117)||(16499100-16499196)
chr3 (25-112)||(40735459-40735545)
chr3 (22-117)||(44331618-44331712)
chr3 (19-157)||(760917-761053)
chr3 (35-117)||(6716585-6716667)
chr3 (19-97)||(29810938-29811016)
chr3 (35-117)||(54635210-54635292)
chr3 (35-129)||(45283071-45283167)
chr3 (19-110)||(22835010-22835100)
chr3 (40-117)||(3617540-3617618)
chr3 (23-117)||(40734572-40734665)
chr3 (20-117)||(29682430-29682526)
chr3 (23-127)||(32891178-32891281)
chr3 (35-123)||(53921498-53921585)
chr3 (40-114)||(25637517-25637592)
chr3 (19-117)||(29813133-29813230)
chr3 (23-117)||(51398888-51398981)
chr3 (40-114)||(4598526-4598601)
chr3 (40-114)||(10056309-10056384)
chr3 (40-114)||(10058531-10058606)
chr3 (40-114)||(10060753-10060828)
chr3 (40-114)||(10062975-10063050)
chr3 (40-114)||(10065197-10065272)
chr3 (40-114)||(10211485-10211560)
chr3 (19-117)||(5236458-5236554)
chr3 (19-109)||(31314515-31314604)
chr3 (23-117)||(39153362-39153455)
chr3 (19-117)||(44700480-44700576)
chr3 (43-157)||(2075039-2075149)
chr3 (40-114)||(4600747-4600822)
chr3 (40-114)||(10209265-10209340)
chr3 (19-117)||(23391910-23392007)
chr3 (148-238)||(31340101-31340191)
chr3 (23-117)||(32744437-32744530)
chr3 (50-123)||(27305705-27305777)
chr3 (33-117)||(9666467-9666550)
chr3 (22-78)||(51352150-51352206)
chr3 (19-97)||(23410349-23410427)
chr3 (40-127)||(33191922-33192008)
chr3 (78-114)||(10067435-10067471)
chr3 (25-112)||(4055769-4055856)
chr3 (55-93)||(5433906-5433944)
chr3 (136-200)||(5270559-5270623)
chr3 (136-215)||(20937844-20937923)
chr3 (25-112)||(4075476-4075563)
chr3 (137-185)||(1683661-1683710)
chr3 (25-76)||(35138746-35138798)
[»] chr4 (75 HSPs)
chr4 (19-262)||(379450-379693)
chr4 (25-262)||(2209790-2210031)
chr4 (25-262)||(41964492-41964726)
chr4 (19-262)||(40632515-40632758)
chr4 (23-260)||(50673705-50673941)
chr4 (23-238)||(12073466-12073681)
chr4 (23-239)||(35662515-35662730)
chr4 (19-216)||(41639496-41639691)
chr4 (23-197)||(6656030-6656203)
chr4 (19-239)||(8648209-8648433)
chr4 (25-188)||(46703577-46703740)
chr4 (19-193)||(8665478-8665651)
chr4 (19-206)||(54883090-54883278)
chr4 (19-117)||(56178637-56178735)
chr4 (19-239)||(50262574-50262799)
chr4 (23-216)||(26364310-26364502)
chr4 (19-197)||(27416886-27417063)
chr4 (35-119)||(29999804-29999888)
chr4 (19-215)||(12119609-12119810)
chr4 (19-127)||(52095353-52095460)
chr4 (25-242)||(33989920-33990138)
chr4 (19-117)||(5370083-5370181)
chr4 (19-117)||(48143113-48143211)
chr4 (25-127)||(6542170-6542271)
chr4 (19-117)||(26175637-26175734)
chr4 (35-117)||(31495316-31495398)
chr4 (36-117)||(13992293-13992374)
chr4 (25-215)||(26699344-26699535)
chr4 (19-109)||(9927467-9927556)
chr4 (19-117)||(12743926-12744023)
chr4 (19-117)||(12745315-12745412)
chr4 (23-127)||(31474225-31474328)
chr4 (35-117)||(8393479-8393562)
chr4 (35-117)||(8395688-8395771)
chr4 (19-117)||(5429749-5429846)
chr4 (19-117)||(12739551-12739648)
chr4 (19-117)||(36463390-36463487)
chr4 (19-109)||(37740695-37740784)
chr4 (23-117)||(48893639-48893732)
chr4 (143-260)||(46703742-46703860)
chr4 (19-117)||(34570415-34570512)
chr4 (19-117)||(36994594-36994691)
chr4 (23-117)||(47038412-47038505)
chr4 (19-127)||(4588029-4588136)
chr4 (33-125)||(37229714-37229805)
chr4 (18-117)||(29254563-29254661)
chr4 (23-117)||(45687183-45687276)
chr4 (23-117)||(46147392-46147485)
chr4 (35-156)||(5207805-5207924)
chr4 (19-79)||(3913518-3913578)
chr4 (19-127)||(51337134-51337241)
chr4 (19-127)||(54199898-54200004)
chr4 (40-114)||(5136155-5136230)
chr4 (40-114)||(5138380-5138455)
chr4 (40-198)||(33089970-33090129)
chr4 (19-117)||(5871890-5871987)
chr4 (19-77)||(12744087-12744145)
chr4 (19-77)||(12745476-12745534)
chr4 (23-97)||(13009464-13009538)
chr4 (19-117)||(52467355-52467452)
chr4 (19-79)||(12747794-12747854)
chr4 (136-239)||(55085320-55085423)
chr4 (40-117)||(7124992-7125070)
chr4 (19-163)||(22882709-22882849)
chr4 (19-163)||(22934373-22934513)
chr4 (19-117)||(52082664-52082755)
chr4 (40-117)||(7122773-7122851)
chr4 (40-124)||(21703829-21703912)
chr4 (23-75)||(24969186-24969238)
chr4 (23-97)||(21688323-21688397)
chr4 (44-163)||(38811144-38811262)
chr4 (71-127)||(24969787-24969842)
chr4 (22-123)||(44967823-44967925)
chr4 (174-239)||(21688470-21688535)
chr4 (43-91)||(37754986-37755034)
[»] chr8 (59 HSPs)
chr8 (19-238)||(4283594-4283812)
chr8 (23-256)||(11384059-11384291)
chr8 (19-260)||(18655470-18655713)
chr8 (25-260)||(40328856-40329086)
chr8 (19-239)||(42434868-42435089)
chr8 (23-262)||(3772266-3772504)
chr8 (19-117)||(42498264-42498362)
chr8 (19-197)||(40221815-40221992)
chr8 (19-117)||(34256507-34256605)
chr8 (19-117)||(17982723-17982821)
chr8 (19-117)||(34254331-34254429)
chr8 (19-197)||(10930118-10930297)
chr8 (19-117)||(31218327-31218425)
chr8 (25-115)||(2627811-2627902)
chr8 (19-117)||(1746219-1746316)
chr8 (19-117)||(33352220-33352317)
chr8 (25-117)||(19945359-19945451)
chr8 (25-117)||(44303931-44304023)
chr8 (19-117)||(5689341-5689438)
chr8 (19-117)||(15212856-15212953)
chr8 (23-117)||(43036497-43036590)
chr8 (23-117)||(3303671-3303764)
chr8 (35-117)||(3439589-3439671)
chr8 (35-117)||(25690040-25690122)
chr8 (19-117)||(27811348-27811445)
chr8 (23-127)||(1292455-1292557)
chr8 (19-117)||(4731728-4731825)
chr8 (35-117)||(4743215-4743296)
chr8 (19-97)||(30143410-30143488)
chr8 (19-117)||(40321150-40321247)
chr8 (23-122)||(4162571-4162668)
chr8 (27-117)||(4733784-4733873)
chr8 (19-117)||(6599042-6599139)
chr8 (19-117)||(6674495-6674592)
chr8 (19-117)||(12702635-12702732)
chr8 (25-122)||(3073870-3073965)
chr8 (23-127)||(10015155-10015256)
chr8 (19-111)||(18141890-18141981)
chr8 (40-114)||(42575327-42575402)
chr8 (19-97)||(1345391-1345469)
chr8 (25-127)||(8153834-8153935)
chr8 (40-113)||(15290614-15290688)
chr8 (40-113)||(15470983-15471057)
chr8 (19-120)||(8965689-8965789)
chr8 (19-111)||(41366622-41366712)
chr8 (100-197)||(2999723-2999820)
chr8 (19-117)||(9765815-9765911)
chr8 (19-93)||(19491723-19491797)
chr8 (35-112)||(18106087-18106161)
chr8 (23-79)||(44353867-44353923)
chr8 (23-109)||(30291681-30291767)
chr8 (25-110)||(7597690-7597776)
chr8 (19-124)||(11711993-11712099)
chr8 (43-120)||(29796317-29796394)
chr8 (33-68)||(10929872-10929907)
chr8 (40-91)||(38863949-38864000)
chr8 (40-93)||(32902197-32902250)
chr8 (144-242)||(10240318-10240417)
chr8 (136-185)||(11137213-11137262)
[»] chr7 (70 HSPs)
chr7 (23-260)||(34310571-34310810)
chr7 (19-260)||(4508563-4508804)
chr7 (25-262)||(8359174-8359408)
chr7 (19-262)||(4510403-4510646)
chr7 (19-262)||(4512245-4512488)
chr7 (23-260)||(3259069-3259305)
chr7 (23-249)||(29608811-29609037)
chr7 (19-238)||(32357934-32358152)
chr7 (19-260)||(2390352-2390596)
chr7 (23-216)||(48599237-48599428)
chr7 (19-127)||(22270043-22270150)
chr7 (19-238)||(6359829-6360050)
chr7 (19-117)||(35853984-35854082)
chr7 (33-117)||(23555124-23555208)
chr7 (19-117)||(29991123-29991221)
chr7 (23-235)||(2360859-2361066)
chr7 (19-117)||(25615923-25616021)
chr7 (35-117)||(39731455-39731537)
chr7 (25-117)||(19502254-19502346)
chr7 (25-242)||(22328265-22328483)
chr7 (19-113)||(6432041-6432134)
chr7 (25-117)||(25766960-25767052)
chr7 (19-117)||(14069834-14069931)
chr7 (19-117)||(14379862-14379959)
chr7 (19-117)||(27347887-27347984)
chr7 (19-157)||(41648973-41649109)
chr7 (23-127)||(31518976-31519080)
chr7 (19-110)||(30024740-30024830)
chr7 (19-126)||(31105385-31105491)
chr7 (22-117)||(41317435-41317529)
chr7 (19-117)||(31732970-31733067)
chr7 (35-117)||(43504154-43504236)
chr7 (23-157)||(8153416-8153546)
chr7 (35-112)||(1560671-1560749)
chr7 (19-117)||(18126714-18126811)
chr7 (40-117)||(18388760-18388838)
chr7 (40-117)||(18392196-18392274)
chr7 (35-117)||(24789927-24790009)
chr7 (19-117)||(36146409-36146506)
chr7 (19-117)||(43864314-43864411)
chr7 (19-117)||(48489501-48489598)
chr7 (19-97)||(48491649-48491727)
chr7 (23-112)||(24525508-24525596)
chr7 (43-127)||(48408898-48408983)
chr7 (19-99)||(1113727-1113807)
chr7 (18-97)||(496003-496082)
chr7 (35-117)||(20343982-20344064)
chr7 (19-110)||(47676144-47676234)
chr7 (40-117)||(6592340-6592418)
chr7 (40-117)||(6594558-6594636)
chr7 (25-127)||(23565053-23565153)
chr7 (40-117)||(32060322-32060400)
chr7 (19-109)||(47673953-47674041)
chr7 (19-112)||(4586231-4586323)
chr7 (19-127)||(26417386-26417493)
chr7 (40-127)||(4253519-4253605)
chr7 (23-117)||(2759198-2759291)
chr7 (19-117)||(4178844-4178941)
chr7 (40-119)||(18396409-18396488)
chr7 (43-117)||(30814530-30814603)
chr7 (23-117)||(38671223-38671316)
chr7 (19-156)||(23344045-23344176)
chr7 (19-124)||(5513661-5513765)
chr7 (19-124)||(36574510-36574614)
chr7 (53-117)||(12097868-12097931)
chr7 (25-79)||(5116680-5116735)
chr7 (40-110)||(3904624-3904693)
chr7 (43-128)||(26639419-26639504)
chr7 (135-241)||(1360048-1360155)
chr7 (23-59)||(31518869-31518905)
[»] chr6 (46 HSPs)
chr6 (25-262)||(26800664-26800900)
chr6 (19-262)||(17758093-17758337)
chr6 (19-239)||(21589001-21589220)
chr6 (19-262)||(2972791-2973037)
chr6 (25-262)||(3808559-3808800)
chr6 (22-259)||(26829979-26830218)
chr6 (23-260)||(5043701-5043939)
chr6 (23-260)||(17763064-17763302)
chr6 (25-259)||(22424682-22424917)
chr6 (19-127)||(21593734-21593841)
chr6 (19-197)||(603005-603186)
chr6 (19-126)||(28137400-28137506)
chr6 (19-117)||(5406200-5406298)
chr6 (19-117)||(5410525-5410623)
chr6 (19-117)||(31404675-31404773)
chr6 (25-117)||(2171532-2171624)
chr6 (19-110)||(5409076-5409167)
chr6 (19-110)||(5413401-5413492)
chr6 (19-115)||(30834538-30834634)
chr6 (35-117)||(6097451-6097533)
chr6 (33-117)||(16452329-16452413)
chr6 (35-117)||(412188-412270)
chr6 (35-117)||(3072759-3072841)
chr6 (19-117)||(9183032-9183129)
chr6 (25-117)||(33160352-33160444)
chr6 (34-157)||(16569107-16569228)
chr6 (23-117)||(33211186-33211279)
chr6 (35-117)||(16578518-16578601)
chr6 (35-117)||(16616779-16616862)
chr6 (35-117)||(16653197-16653280)
chr6 (35-129)||(27647946-27648041)
chr6 (40-117)||(25421396-25421474)
chr6 (27-117)||(26954287-26954376)
chr6 (35-117)||(16554954-16555037)
chr6 (35-117)||(16631510-16631593)
chr6 (40-117)||(6027337-6027415)
chr6 (49-117)||(34167180-34167248)
chr6 (40-114)||(13154005-13154080)
chr6 (40-114)||(33342108-33342183)
chr6 (40-114)||(34164948-34165023)
chr6 (19-94)||(3038926-3039001)
chr6 (39-215)||(9572681-9572858)
chr6 (43-91)||(4045518-4045566)
chr6 (19-200)||(25073638-25073826)
chr6 (40-76)||(2908550-2908586)
chr6 (73-117)||(19643894-19643938)
[»] scaffold0176 (1 HSPs)
scaffold0176 (23-261)||(17859-18097)
[»] chr5 (58 HSPs)
chr5 (19-261)||(213535-213780)
chr5 (25-235)||(27637495-27637704)
chr5 (21-239)||(5058117-5058336)
chr5 (23-197)||(40147335-40147508)
chr5 (20-212)||(27015594-27015783)
chr5 (19-127)||(28278386-28278493)
chr5 (25-117)||(37439217-37439309)
chr5 (25-127)||(13239827-13239929)
chr5 (19-117)||(25412830-25412928)
chr5 (19-127)||(16452150-16452257)
chr5 (35-117)||(9789224-9789306)
chr5 (35-117)||(16409561-16409643)
chr5 (35-117)||(26170848-26170930)
chr5 (35-117)||(26177968-26178050)
chr5 (35-117)||(18441648-18441730)
chr5 (25-117)||(13343137-13343228)
chr5 (25-242)||(16640814-16641029)
chr5 (35-117)||(29751160-29751242)
chr5 (19-117)||(30182658-30182756)
chr5 (19-117)||(32636894-32636991)
chr5 (19-117)||(42428431-42428528)
chr5 (19-112)||(13488273-13488365)
chr5 (25-117)||(36074043-36074134)
chr5 (35-117)||(10593343-10593426)
chr5 (35-129)||(22536277-22536372)
chr5 (19-117)||(533839-533936)
chr5 (35-117)||(29720450-29720532)
chr5 (35-117)||(29722610-29722692)
chr5 (19-112)||(28750661-28750753)
chr5 (19-110)||(538095-538185)
chr5 (22-157)||(31183044-31183177)
chr5 (18-97)||(42426255-42426334)
chr5 (40-117)||(25078211-25078289)
chr5 (40-117)||(25136180-25136258)
chr5 (19-110)||(30682930-30683022)
chr5 (19-117)||(33831750-33831847)
chr5 (40-117)||(40380181-40380259)
chr5 (40-117)||(40382392-40382470)
chr5 (25-200)||(316838-317014)
chr5 (19-127)||(3075649-3075756)
chr5 (19-117)||(8565947-8566044)
chr5 (168-260)||(40751195-40751284)
chr5 (23-127)||(42926965-42927068)
chr5 (40-114)||(16544499-16544574)
chr5 (40-114)||(16546721-16546796)
chr5 (25-127)||(9049333-9049434)
chr5 (19-117)||(39468550-39468647)
chr5 (168-260)||(40763200-40763289)
chr5 (52-200)||(4160702-4160850)
chr5 (40-117)||(19806454-19806530)
chr5 (19-127)||(13695681-13695789)
chr5 (19-112)||(38747075-38747167)
chr5 (25-123)||(33906024-33906123)
chr5 (25-163)||(30793212-30793346)
chr5 (25-99)||(42309953-42310027)
chr5 (25-200)||(10054732-10054909)
chr5 (73-117)||(18596881-18596924)
chr5 (73-117)||(38882340-38882383)
[»] scaffold0466 (1 HSPs)
scaffold0466 (19-216)||(7397-7593)
[»] chr2 (49 HSPs)
chr2 (19-262)||(45726999-45727240)
chr2 (19-216)||(35446787-35446982)
chr2 (23-241)||(7451192-7451410)
chr2 (19-262)||(42287966-42288208)
chr2 (19-242)||(33648241-33648465)
chr2 (42-260)||(17450671-17450884)
chr2 (19-260)||(1631590-1631830)
chr2 (25-117)||(36988076-36988168)
chr2 (25-117)||(2334418-2334510)
chr2 (25-117)||(5723256-5723348)
chr2 (19-206)||(24398127-24398318)
chr2 (19-117)||(6595006-6595104)
chr2 (25-117)||(4503133-4503224)
chr2 (25-117)||(45099831-45099922)
chr2 (19-117)||(4484330-4484429)
chr2 (19-117)||(30833415-30833514)
chr2 (19-157)||(723706-723842)
chr2 (35-117)||(6266777-6266859)
chr2 (23-117)||(17057370-17057463)
chr2 (23-117)||(17085353-17085446)
chr2 (35-117)||(32289650-32289732)
chr2 (19-117)||(36318010-36318107)
chr2 (33-123)||(17490143-17490232)
chr2 (35-157)||(34139732-34139852)
chr2 (19-117)||(38312310-38312407)
chr2 (19-112)||(29867939-29868031)
chr2 (35-114)||(13656035-13656115)
chr2 (25-117)||(36205665-36205756)
chr2 (40-117)||(12647386-12647464)
chr2 (23-117)||(36773636-36773729)
chr2 (19-117)||(11067375-11067472)
chr2 (19-117)||(11151592-11151689)
chr2 (19-117)||(33162451-33162548)
chr2 (19-97)||(42362422-42362500)
chr2 (19-109)||(14633834-14633924)
chr2 (25-206)||(30217956-30218137)
chr2 (43-117)||(39284930-39285003)
chr2 (25-120)||(26353260-26353354)
chr2 (28-123)||(11049633-11049727)
chr2 (19-110)||(11690571-11690661)
chr2 (40-106)||(28672022-28672088)
chr2 (25-79)||(7815311-7815365)
chr2 (34-79)||(14202450-14202495)
chr2 (25-83)||(13121843-13121901)
chr2 (48-94)||(42412117-42412162)
chr2 (26-117)||(24197973-24198064)
chr2 (135-200)||(42261402-42261465)
chr2 (43-91)||(42019896-42019944)
chr2 (73-117)||(42064725-42064769)
[»] scaffold0236 (1 HSPs)
scaffold0236 (25-260)||(10565-10800)
[»] scaffold0286 (1 HSPs)
scaffold0286 (23-117)||(11631-11725)
[»] scaffold0002 (2 HSPs)
scaffold0002 (19-117)||(434603-434701)
scaffold0002 (135-200)||(490237-490300)
[»] scaffold0016 (1 HSPs)
scaffold0016 (25-117)||(114678-114770)
[»] scaffold0491 (2 HSPs)
scaffold0491 (19-117)||(8735-8834)
scaffold0491 (19-117)||(11161-11260)
[»] scaffold1519 (1 HSPs)
scaffold1519 (19-117)||(986-1083)
[»] scaffold0006 (1 HSPs)
scaffold0006 (20-117)||(149098-149194)
[»] scaffold0066 (1 HSPs)
scaffold0066 (19-127)||(20406-20513)
[»] scaffold0674 (1 HSPs)
scaffold0674 (40-114)||(3729-3804)
[»] scaffold0565 (1 HSPs)
scaffold0565 (40-117)||(2604-2682)
[»] scaffold0137 (1 HSPs)
scaffold0137 (40-114)||(6363-6438)
[»] scaffold0219 (1 HSPs)
scaffold0219 (23-120)||(27439-27537)
[»] scaffold0197 (1 HSPs)
scaffold0197 (143-215)||(1298-1370)
[»] scaffold1808 (1 HSPs)
scaffold1808 (85-114)||(1-30)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-62)||(80338-80382)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 29136317 - 29136558
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29136317 aacccatttgtatttctttgtaagaactcattgatcgtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacat 29136416  T
Q  119 ttcttggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29136417 ttcttggtgctgtctatttttctctactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttatagactaggtctattt 29136516  T
Q  219 tgtttttattgcttgtggttatttacatttgattattggttg 260  Q
    |||| |||||||||||||||| ||| ||||| ||||||||||    
T  29136517 tgttgttattgcttgtggttagttatatttggttattggttg 29136558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 13549098 - 13548879
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13549098 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 13549000  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcac-ttggtttatagactaggtctat 216  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||  | ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  13548999 ttcttggtgttgt-tatcttttctttactctctttatcttgtttattctttggttggattgtggttttgctatgcactttggtttatagactaggtctat 13548901  T
Q  217 tttgtttttattgcttgtggtt 238  Q
     || || || ||||||||||||    
T  13548900 attattgttgttgcttgtggtt 13548879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 47255438 - 47255216
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  47255438 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacat 47255339  T
Q  119 ttcttggtgctgtctatttttctc---tactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtcta 215  Q
    ||||||||| |||   ||||| ||   |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47255338 ttcttggtgttgttattttttttcttttactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttatagactaggtcta 47255239  T
Q  216 ttttgtttttattgcttgtggtt 238  Q
    | || || || |||||| |||||    
T  47255238 tattattgttgttgcttatggtt 47255216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 11348768 - 11349006
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  11348768 aacccatttgtatctctttctaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaacat 11348866  T
Q  119 ttcttggtgctgtctat-ttttctcta--ctctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtc 213  Q
    |||||| || ||| ||| |||||| ||  |||||||||||||||||||  ||||   || ||||||||||||||||||||||||||||||||||||||||    
T  11348867 ttcttgatgttgt-tatcttttctttactctctctttatcttgtttattccttg-ctttggattgtggttttgctatgcacttggtttatagactaggtc 11348964  T
Q  214 tattttgtttttattgcttgtggttatttacatttgattatt 255  Q
    ||| ||||| ||||||||||||||||||||||||||||||||    
T  11348965 tatattgttgttattgcttgtggttatttacatttgattatt 11349006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 31925805 - 31925585
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  31925805 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaag-ttggaccgaactaggtgaacat 31925707  T
Q  119 ttcttggtgctgtctatttttctctactctctttatcttgt-ttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| |||   ||||||| ||||||| ||||||||| ||||  | ||||| |||||||||||||||||||||||||||||||||||||||||||     
T  31925706 ttcttggtgttgttattttttctttactctcgttatcttgtattattctttggttggattgtggttttgctatgcacttggtttatagactaggtctata 31925607  T
Q  218 ttgtttttattgcttgtggtta 239  Q
    || || ||||||||||||||||    
T  31925606 ttattgttattgcttgtggtta 31925585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 37876864 - 37876621
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||  ||||||| | ||||||||||||||||||    
T  37876864 aacccatttgtatctctttgtaataactcattgatagtggattgcagagatcaatctctcctccagagtacatcaagtt-gaaccgaactgggtgaacat 37876766  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||| | |||||  ||||||||||| ||||||||||||||||||||||||||||||     
T  37876765 ttcttggtgttgt-tatcttttctttactctctttatcttgtttatcatttggttgaattgtggtttttctatgcacttggtttatagactaggtctata 37876667  T
Q  218 ttgtttttattgcttgtgg-ttatttacatttgattattggttgcc 262  Q
     |||| || |||||||||| ||||||||||||| ||||||||||||    
T  37876666 gtgttgtttttgcttgtggtttatttacatttggttattggttgcc 37876621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 260
Target Start/End: Original strand, 37168374 - 37168606
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37168374 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacatttcttg 37168472  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| ||| ||| |||||| |||||||||||||||||||||    ||||| ||||||||||||||||||||||| | |||||||||||||||| | | ||     
T  37168473 gtgttgt-tatcttttctttactctctttatcttgtttattccttggtttgattgtggttttgctatgcactt-gattatagactaggtcta-tatattg 37168569  T
Q  224 ttattgcttgtggttatttacatttgattattggttg 260  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  37168570 ttgttgcttgaggttatttacatttggttattggttg 37168606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 26 - 260
Target Start/End: Original strand, 28242382 - 28242616
Alignment:
Q  26 ttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttgg 125  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  28242382 ttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttgg 28242480  T
Q  126 tgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtgg-ttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    || ||| ||| ||||||||||||||||||||||||||||| | | |||||||||||| ||||||||| |||||||||| || | ||| ||||  |||||     
T  28242481 tgttgt-tatcttttctctactctctttatcttgtttatcattttgttagattgtggtttttgctattcacttggtttctaaattagatctagattgttg 28242579  T
Q  224 ttattgcttgtggttatttacatttgattattggttg 260  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  28242580 ttgttgcttgaggttatttacatttggttattggttg 28242616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 33 - 262
Target Start/End: Complemental strand, 37033156 - 37032924
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt----tcttggtgc 128  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||| | ||||||||||||||||||||| |    || || ||     
T  37033156 tctttgtaagaactcattgatagtggattggagagattaatctcttctccatagtaggtcatggttggaccgaactgggtgaacaatctattcgtgttgt 37033057  T
Q  129 tgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttatt 228  Q
    |||||||||| ||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||| ||| |||| ||| ||||  ||||| |||||    
T  37033056 tgtctatttt-ctctactctctttatcttgtttatcctttggttagagtgtgattttgctatgcacttgttttctagattagatctagattgttgttatt 37032958  T
Q  229 gcttgtggttatttacatttgattattggttgcc 262  Q
    ||||||||||||||||||||| ||||||||||||    
T  37032957 gcttgtggttatttacatttggttattggttgcc 37032924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 47115248 - 47115475
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||    
T  47115248 tttgtatctctttgtaaaaacccattgatagtggattggagagatcaatctctgctccagagtaggtcattgttggaccgaactgggtgaacatttcttg 47115347  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
     || ||| ||| |||||||| |||| ||||||||||||||| | | ||||||||||||||||| |||||||||| ||| |||| ||| ||||  |||||     
T  47115348 atgttgt-tatcttttctctgctctttttatcttgtttatccttttgttagattgtggttttgttatgcacttgttttctagattagatctagattgttg 47115446  T
Q  224 ttattgcttgtggttatttacatttgatt 252  Q
    |||||||||||| ||||||||||||||||    
T  47115447 ttattgcttgtgattatttacatttgatt 47115475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 13547187 - 13546972
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13547187 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 13547089  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagac--taggtcta 215  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||  | ||||| |||||||||||     ||||||||||||||| ||  ||||||||    
T  13547088 ttcttggtgttgt-tatcttttctttactctctttatcttgtttattctttggttggattgtggttt-----tgcacttggtttataaactataggtcta 13546995  T
Q  216 ttttgtttttattgcttgtggtt 238  Q
    | || || || ||||||||||||    
T  13546994 tattattgttgttgcttgtggtt 13546972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 42298069 - 42297850
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttc 121  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||| || ||    
T  42298069 catttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctc 42297970  T
Q  122 ttgg---tgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattt 218  Q
    ||||   || ||||||||||||| |||||| ||||||||||||||  | ||||| ||||||| ||||||||||||||||||||||||||| ||| ||| |    
T  42297969 ttggtgttgttgtctatttttctttactct-tttatcttgtttattatttggttggattgtgattttgctatgcacttggtttatagacttggtatatat 42297871  T
Q  219 tgtttttattgcttgtggtta 239  Q
    | || ||||||||| ||||||    
T  42297870 tattgttattgcttatggtta 42297850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 25 - 247
Target Start/End: Complemental strand, 7482322 - 7482100
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| ||    
T  7482322 tttgtatctctttgtaagaactcattgatagtgaattggagagatcaatctctccttcagagtaggtcaag-ttggaccgaactaggtgaacatttcatg 7482224  T
Q  125 gtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtc--tattttgtt 222  Q
    ||  ||||   |||||| |||||||||||||||||||||    ||||| ||||||||||||||||||||||| | ||||||||||||||  ||| |||||    
T  7482223 gtattgtcatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcactt-gattatagactaggtctatatattgtt 7482125  T
Q  223 tttattgcttgtggttatttacatt 247  Q
     || ||||||| |||||||||||||    
T  7482124 gttgttgcttgaggttatttacatt 7482100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 19754565 - 19754737
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||| ||||| ||||     
T  19754565 aaccgatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccctcagattaggtcaag-ttggaccgaagtgggtcaacaa 19754663  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgca 193  Q
    || |||||| ||| ||| |||||| |||||||||||||||||||||| | | ||| ||||||||||||||||||||    
T  19754664 tttttggtg-tgt-tatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctatgca 19754737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 8550881 - 8550787
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8550881 catttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 8550787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 13316450 - 13316352
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13316450 aacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 13316352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 193685 - 193788
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||    
T  193685 catttgtatctctttgtaataactcattgatagtggattggagagatcaatctcttctccagagtatgtcaag-ttggaccgaactgggtgaacatttct 193783  T
Q  123 tggtg 127  Q
    |||||    
T  193784 tggtg 193788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 3189406 - 3189498
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3189406 tttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaaca 3189498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 3198223 - 3198315
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3198223 tttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaaca 3198315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 3207062 - 3207154
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3207062 tttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaaca 3207154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 20762742 - 20762837
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  20762742 aacccttttgtatctcttcgtaagaactcattgatagtggattggagagatcaatctctcctacagagtaggtcaagtttggaccgaactaggtga 20762837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 834265 - 834129
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||     
T  834265 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagagtaggtcaag-ttggaccgaactgggtcaacaa 834167  T
Q  119 ttcttggtgctgtctatttttctctactctctttatctt 157  Q
    |  |||||| ||| | ||| ||||| |||||||||||||    
T  834166 tctttggtg-tgtttgtttctctcttctctctttatctt 834129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 28220324 - 28220227
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  28220324 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 28220227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 260
Target Start/End: Original strand, 34603661 - 34603874
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgctgtc 132  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||           || || | ||    
T  34603661 tctttgtaagaactcattgatggtggattgaagagatcaatctctcctccagagtaggtcaag-ttggaccgaactagg-----------tgttgttatc 34603748  T
Q  133 tatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtc--tattttgtttttattgc 230  Q
       |||||| |||||||||||||||||||||    ||||| ||||||||||||||||||||||| | ||||||||||||||  ||| ||| | ||  |||    
T  34603749 ---ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcactt-gattatagactaggtctatatattgctgttggtgc 34603844  T
Q  231 ttgtggttatttacatttgattattggttg 260  Q
    ||| ||||||||||||||||||||||||||    
T  34603845 ttgaggttatttacatttgattattggttg 34603874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 51765483 - 51765565
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51765483 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggacaagtttggaccgaactgggtgaaca 51765565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 3156935 - 3157032
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  3156935 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 3157032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 9987287 - 9987369
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9987287 tttgcaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 9987369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 20622319 - 20622237
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20622319 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 20622237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 28223519 - 28223422
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  28223519 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 28223422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 28265652 - 28265555
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  28265652 aacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 28265555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 40282463 - 40282545
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40282463 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40282545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 13659433 - 13659337
Alignment:
Q  20 acccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||    
T  13659433 acccatttatatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggttaag-ttggaccgaactgggtcaaca 13659337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 19752756 - 19752930
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||| | ||||||||| |||||||||||| ||| ||||     
T  19752756 aaccgatttgtatctctttgtaagaactcattgatagaggattggagagatcaatctctctcccatattaggtcaag-ttggaccgaactaggtcaacaa 19752854  T
Q  119 ttcttggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    |  || ||| | ||   |||| | |||||||||||||||||||||| | | ||| |||||||||||| |||||||||||    
T  19752855 tcttttgtgttatc---ttttatttactctctttatcttgtttatccttttgttggattgtggttttactatgcacttg 19752930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 45644453 - 45644355
Alignment:
Q  18 caacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||| ||||    
T  45644453 caactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatatctcccccagattaggtcaag-ttggaccgaactgggtcaaca 45644355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 31659308 - 31659405
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||||||||| ||||    
T  31659308 aacccatttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctccctcagattaggtcaag-ttggaccgaactgggtcaaca 31659405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 49918420 - 49918517
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||| ||| ||||    
T  49918420 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaag-ttggaccgaactaggtcaaca 49918517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 23555359 - 23555256
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||| ||||||| || |||||||||    
T  23555359 catttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcc-ccatagtaggtcaag-ttggatcgaactgagtaaacatttct 23555262  T
Q  123 tggtgc 128  Q
    ||||||    
T  23555261 tggtgc 23555256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 44455234 - 44455322
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  44455234 catttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttt-gaccgaactgggt 44455322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 21054044 - 21054123
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  21054044 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 21054123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 3847219 - 3847083
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||| |||||||||||| ||| ||||     
T  3847219 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatccatctcttccccagattaggtcaag-ttggaccgaacttggtcaacaa 3847121  T
Q  119 ttcttggtgctgtctatttttctctactctctttatctt 157  Q
    |  |||||| ||| | ||| ||||| |||||||||||||    
T  3847120 tctttggtg-tgtttgtttctctcttctctctttatctt 3847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 4552735 - 4552638
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| ||||    
T  4552735 aacccctttgtatccctttgtaagaactcattgataatggattggagagatcaatctctccctcagagtaggtcaag-ttggaccgaactgggtcaaca 4552638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 9036502 - 9036584
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  9036502 tttgtaagaactctttgatagtggattgaagagtacaatctctcctcgagagtaggtcaagtttggaccgaactgggtgaaca 9036584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 44203722 - 44203800
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203722 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 44203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 46064996 - 46065085
Alignment:
Q  27 tgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||    
T  46064996 tgtatctctttgtaagaactcattcatagtggattggagagatcaatctctcccccagagtaggtcaag-ttggatcgaactgggtaaaca 46065085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 50167273 - 50167176
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||||||||||| ||| ||||    
T  50167273 aacccatttgtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattagctcaag-ttggaccgaactaggtcaaca 50167176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 16455691 - 16455825
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||| || ||||| ||||| || |||||    
T  16455691 aacccatttgtatctctgtgtaagaactcattgatagtggattggagagatcaatctctctcccatagtcggtcaaatt-ggaccaaactgtgtaaacat 16455789  T
Q  119 ttcttggtgctgtctatttttctctactctctttatctt 157  Q
    |||||||||   | | | ||||||| |||||||||||||    
T  16455790 ttcttggtg---tatttgtttctcttctctctttatctt 16455825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 1833596 - 1833667
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaa 94  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  1833596 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccaccagattaggtcaa 1833667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 15820381 - 15820484
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||| ||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||| ||||| |||||| ||| ||||||| |    
T  15820381 catttgtatctctttttaagaactcattgatagtgcattgaagagataaatctctcatccagagtaggtcaag-ttggatcgaactaggtaaacatttat 15820479  T
Q  123 tggtg 127  Q
    |||||    
T  15820480 tggtg 15820484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 36683766 - 36683857
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtg 127  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| || |||||||||| || ||||| ||||||||    
T  36683766 tttgtaagaactcattgatagtggattgtagaaatcaatctctcccccagagtaggtcaag-ttagaccgaactgagtaaacatctcttggtg 36683857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 37503648 - 37503577
Alignment:
Q  26 ttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  37503648 ttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattatgtcaagtt 37503577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 37559966 - 37559868
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctcc-agagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| || ||| ||||||||| |||||||||||| ||| ||||    
T  37559966 aacccatttgtatctctttgtaagaactcgttgatagtgaattggagagatcaatctctccccctagattaggtcaag-ttggaccgaacttggtcaaca 37559868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 50169304 - 50169218
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| | ||| ||||||||| ||||||||||||||    
T  50169304 catttgtatctctttgtaagtactcattgatagtggattgaagagatcaatctctcccctagattaggtcaag-ttggaccgaactgg 50169218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 197002 - 196869
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctct-cctccagagtaggtcaagtttggaccgaactgggtgaacatttc 121  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||  |||||| || ||||| ||||||||| |||||||||||||| | |||| |      
T  197002 catttgtatccctttgtaagaactcattgatagtggattggagagatttatctctccccccagattaggtcaag-ttggaccgaactggatcaacaatct 196904  T
Q  122 ttggtgctgtctatttttctctactctctttatctt 157  Q
    |||||| ||| | ||| ||||| |||||||||||||    
T  196903 ttggtg-tgtttttttctctcttctctctttatctt 196869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 2926606 - 2926724
Alignment:
Q  46 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttc-ttggtgctgtctatttttctcta 144  Q
    |||||| ||||||||||||||||||||||||| || ||||||||||||   ||| |||||||| ||| |||| ||| |||||| |||   |||| |||||    
T  2926606 tcattggtagtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccgaactaggtaaacaattctttggtgttgttctttttactcta 2926705  T
Q  145 ctctctttatcttgtttat 163  Q
    |||||||||||||||||||    
T  2926706 ctctctttatcttgtttat 2926724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 206
Target Start/End: Original strand, 6808528 - 6808710
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||| |  |||||||||| |   |||| ||||||| | | || |||||||    
T  6808528 tttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctcttcctcagagtaggttattgttggtccgaactagataaatatttctt 6808627  T
Q  124 ggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttataga 206  Q
    || | |||   || || |||||||||||||||||||||||  | | ||| ||| ||| ||||||| | |||||||||| ||||    
T  6808628 ggagttgttctttgttttctactctctttatcttgtttatgctttagtttgatagtgattttgctttacacttggtttctaga 6808710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 13138074 - 13137977
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||| || ||||||||||||| |||||||||||||||| ||||| |||||||||| | |||||||||| |  |||||||||||||||| ||||    
T  13138074 aacccatttgcatctctttgtaagaacacattgatagtggattgaagagagcaatctctcccctagagtaggtc-atattggaccgaactgggtcaaca 13137977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 30476544 - 30476447
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| | ||| |  |||| ||| |||||||||||||||| ||||    
T  30476544 aacccatttgtatctctttgtaagaactcattgatactggattggacagatcaatctctaccccatatgaggttaag-ttggaccgaactgggtcaaca 30476447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 22079392 - 22079491
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||||||    |||||| |||| ||| ||||||||||    
T  22079392 tttgtatctctttgtaaagaactcattgatattggattggagagatcaatttctcctccaaagtaggtcattgctggaccaaacttggtaaacatttctt 22079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 41360984 - 41361058
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 93  Q
    ||||||||||||| ||||||||||||||| |||||||||||||  |||||||||| ||||| ||| |||||||||    
T  41360984 aacccatttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtca 41361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 5459985 - 5460081
Alignment:
Q  29 tatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||| |||   |||| | ||||| ||| |||||||||||    
T  5459985 tatttctttgtaaagaactcattgatagtagattggagagatcaatctctcatctagagtagatcattgttgggctgaactaggtaaacatttcttg 5460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 8871130 - 8871054
Alignment:
Q  49 ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggt 126  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||||| || || ||||||| |||||    
T  8871130 ttgatagtggattggagagatcaatctctcccccatagtaggccaag-ttggaccgaattgagtaaacatttattggt 8871054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 40122292 - 40122197
Alignment:
Q  23 catttgtatttctttgtaagaactcattgata--gtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||  |||||||||||||| ||||||  ||||||| ||||||||||||||||| ||| | ||||||||| |||||||||||| ||| ||||    
T  40122292 catttgtatcactttgtaagaactctttgatatagtggattagagagatcaatctctcccccatattaggtcaag-ttggaccgaactaggtcaaca 40122197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 194750 - 194810
Alignment:
Q  178 gtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtggtt 238  Q
    ||||||||| ||||||||||||||||||||||||||||| || || || ||||||||||||    
T  194750 gtggttttgatatgcacttggtttatagactaggtctatattattgttgttgcttgtggtt 194810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 928074 - 927971
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||| |||| || ||||||||| |||||||| |||||||||| |||||| ||| |||| | |||  |||||||||| || ||||||||||||| |||||    
T  928074 aacccttttggatctctttgtaaaaactcattaatagtggattagagagaccaacctcttccccaaggtaggtcaag-ttagaccgaactgggtaaacat 927976  T
Q  119 ttctt 123  Q
    |||||    
T  927975 ttctt 927971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 9109518 - 9109347
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||| |||| | ||||||||| ||||||||||||||||||| |   |||||| ||||   ||| ||| |||| ||| ||||    
T  9109518 aacccttttgtatctctttgtaaagaacacgttgatagtgtattggagagatcaatctcttccatagagtaagtcatcgttgaaccaaactaggtaaaca 9109419  T
Q  118 tttcttggtgctgtctattt-ttctctactctctttatc-ttgtttatcttgtggttagattgtggttttgct 188  Q
    ||| |||| ||||| |||||  ||||||||||||||||| ||||||||  | ||||| |||||||||| ||||    
T  9109418 ttttttggggctgt-tatttagtctctactctctttatctttgtttattctttggtttgattgtggttatgct 9109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 10925297 - 10925393
Alignment:
Q  23 catttgtatttctttgtaagaac---tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||    ||||||||||||||||||||| |||||||||||| | ||| ||||| ||| ||||| |||||||||| ||||    
T  10925297 catttgtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctctcccctagattaggtaaag-ttggatcgaactgggtcaaca 10925393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 37282790 - 37282681
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| |||| || ||||||||| |||||||||  ||||||||||||||||| ||||||||||   ||||||||||| ||||||| ||||| | | ||||    
T  37282790 aacccttttgcatctctttgtaaagaactcattagtagtggattggagagataaatctctcctttggagtaggtcaa-tttggactgaactagataaaca 37282692  T
Q  118 tttcttggtgc 128  Q
    ||| |||||||    
T  37282691 ttttttggtgc 37282681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 13938213 - 13938281
Alignment:
Q  25 tttgtatttctttgtaagaa-ctcattgatagtggattggagagatcaatctctcctccaga-gtaggtca 93  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  13938213 tttgtatctctttgtaagaaactcattgatagtggattggagagatc--tctctcccccagatgtaggtca 13938281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 2263051 - 2262965
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggt 126  Q
    ||||||| ||||||||||||||| |||||||||||| |||   || ||||||||   |||| |||||||| || |||||||||||||    
T  2263051 aagaacttattgatagtggattgaagagatcaatctttcccttagggtaggtcattgttggtccgaactgagtaaacatttcttggt 2262965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 44646875 - 44646794
Alignment:
Q  46 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgc 128  Q
    ||||| ||||||||||| |||||||||||||| | | | |||||||||| ||||||||||||| ||| || |||| |||||||    
T  44646875 tcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaa-tttggaccgaactaggtaaatattttttggtgc 44646794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 44650233 - 44650152
Alignment:
Q  46 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgc 128  Q
    ||||| ||||||||||| |||||||||||||| | | | |||||||||| ||||||||||||| ||| || |||| |||||||    
T  44650233 tcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaa-tttggaccgaactaggtaaatattttttggtgc 44650152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 3460766 - 3460869
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||| ||||  ||||||||| |||||||||||||||| ||| | | |||||||||||| ||| |||| || | ||| ||||    
T  3460766 aacccttttgtatatctttgtaaagaacatattgatagtcgattggagagatcaatatcttc-ctagagtaggtcaa-tttagaccaaattaggtaaaca 3460863  T
Q  118 tttctt 123  Q
    ||||||    
T  3460864 tttctt 3460869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 15916626 - 15916670
Alignment:
Q  73 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||| |||||||| ||||||||||||||||| ||||    
T  15916626 tctctcccccagactaggtcaattttggaccgaactgggtaaaca 15916670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 31422906 - 31422863
Alignment:
Q  73 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||    
T  31422906 tctctcctccagactaggtcaa-tttggaccgagctgggtgaaca 31422863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 169; Significance: 1e-90; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 6095697 - 6095455
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  6095697 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt-ggaccgaactgtgtgaacat 6095599  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||    ||||| ||||||||||||||||| ||||| |||||||||||||||||||     
T  6095598 ttcttggtgttgt-tatcttttctttactctctttatcttgtttatgccttggttggattgtggttttgctatacacttcgtttatagactaggtctata 6095500  T
Q  218 ttgtttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  6095499 ttgttgttattgcttgtggttatttacatttgattattggttgcc 6095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 46860544 - 46860787
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||| ||| |||||||    
T  46860544 aacccatttgtatctctttgtaataactcattgatagtggattggagagatcaatctttcctccagagtaggtcattgttggaccgaattggatgaacat 46860643  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    || |||||| ||| ||| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||     
T  46860644 tttttggtgttgt-tatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttatagattaggtctata 46860742  T
Q  218 ttgtttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    ||||| || ||| ||||||||||||||||||| ||||||||||||    
T  46860743 ttgttgttgttgtttgtggttatttacatttggttattggttgcc 46860787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 49199561 - 49199320
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt-tctt 123  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||| | ||||    
T  49199561 tttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagactaggtcatggttggaccgaactgggtgaacaatctctt 49199462  T
Q  124 ggtgctgt---ctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttg 220  Q
    |||| |||   ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||  |||    
T  49199461 ggtgttgttgtctatttttctctactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattg 49199362  T
Q  221 tttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    || |||||||||||||||||||||||||| ||||||||||||    
T  49199361 ttgttattgcttgtggttatttacatttggttattggttgcc 49199320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 33 - 262
Target Start/End: Complemental strand, 43401885 - 43401652
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt-tcttggtgctgt 131  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||||||||||| | |||||||| |||    
T  43401885 tctttgtaagaactcattgatagtggattggagaaattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgttgt 43401786  T
Q  132 ---ctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttatt 228  Q
       ||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||| |||| ||| ||||  ||||| |||||    
T  43401785 tgtctatttttctctactctctttatcttgtttatcctttggttagattgtgattttgctatgcacttgttttctagattagatctagattgttgttatt 43401686  T
Q  229 gcttgtggttatttacatttgattattggttgcc 262  Q
    ||||||||||||||||||||| ||||||||||||    
T  43401685 gcttgtggttatttacatttggttattggttgcc 43401652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 33 - 262
Target Start/End: Complemental strand, 43403828 - 43403595
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt-tcttggtgctgt 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| | ||||| || |||    
T  43403828 tctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttgatgttgt 43403729  T
Q  132 c---tatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttatt 228  Q
        |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||  ||||| |||||    
T  43403728 tgtttatttttctccactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattgttattatt 43403629  T
Q  229 gcttgtggttatttacatttgattattggttgcc 262  Q
    ||||||||||||||||||||| ||||||||||||    
T  43403628 gcttgtggttatttacatttggttattggttgcc 43403595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 54593774 - 54594017
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  54593774 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtatgtcaag-ttggaccaaactgggtgaacat 54593872  T
Q  119 ttcttggtgctgtctat-ttttctcta--ctctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtc 213  Q
    ||||||||| ||| ||| |||||| ||  |||||||||||||||||||  ||||   || ||||||||||||||||||||| |||||||||||||| |||    
T  54593873 ttcttggtgttgt-tatcttttctttagtctctctttatcttgtttattccttg-ctttggattgtggttttgctatgcacatggtttatagactatgtc 54593970  T
Q  214 tattttgtttttattgcttgtggttatttacatttgattattggttg 260  Q
    ||| || || |||||||||||||||||||| ||||| ||||||||||    
T  54593971 tatattcttgttattgcttgtggttatttatatttggttattggttg 54594017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 41819614 - 41819380
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||   ||||||| |||||||||||||||| |||    
T  41819614 tttgtatctctttgtaagaactcatt-atagtggattggagacatcaatctctcctccagagtaggtcattgttggaccaaactgggtgaacatttattg 41819516  T
Q  125 gtgctgtc-tatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| |||  | |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| |||||     
T  41819515 gtgttgttatttttttctctactttctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttatggactaggtctatattgttg 41819416  T
Q  224 ttattgcttgtggttatttacatttgattattggttgcc 262  Q
    || |||||||||   |||||| |||| || |||||||||    
T  41819415 ttgttgcttgtg---atttacttttggttgttggttgcc 41819380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 55302070 - 55301827
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||   |||||||||||| |||||||||    
T  55302070 aacctatttgtatctctttgtaagaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaacat 55301971  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttgg-tttatagactaggtctat 216  Q
    ||||| ||| ||| ||| |||||| |||||||||||||||||||||| | |||||  ||||||| |||||||||||||||| ||| |||| ||| ||||     
T  55301970 ttcttagtgttgt-tatcttttctttactctctttatcttgtttatcctttggttgaattgtggctttgctatgcacttggttttctagattagatctag 55301872  T
Q  217 tttgtttttattgcttgtgg-ttatttacatttgattattggttg 260  Q
     ||||||||||||||||||| ||||| ||||||| ||||||||||    
T  55301871 attgtttttattgcttgtggtttattcacatttggttattggttg 55301827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 30236195 - 30236415
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||| ||| ||| |    
T  30236195 aacctatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactaggtcaacaa 30236293  T
Q  118 tttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    |||||||||| ||| ||| |||||| |||||||||||||||||||||    ||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  30236294 tttcttggtgttgt-tatcttttctttactctctttatcttgtttataccttggttggattgtgtttttgttatgcacttggtttatagactaggtctat 30236392  T
Q  217 tttgtttttattgcttgtggtta 239  Q
     ||||| || |||||||||||||    
T  30236393 attgttgttgttgcttgtggtta 30236415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 40913367 - 40913544
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttc 121  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||| || ||    
T  40913367 catttgtatctctttgtaagaactcatcgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatctc 40913465  T
Q  122 ttggtg---ctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    ||||||    |||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  40913466 ttggtgttattgtctatttttctctaatctctttatcttgtttatcctttggttagattgtggttttgctatgcacttg 40913544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 4570026 - 4570202
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  4570026 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctactccagagtaggtgaagtttggaccgaactgggtcaacatttct 4570125  T
Q  123 tggtgctg-tctatttttctctactctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttg 197  Q
    ||||| || | ||||||  | | ||| |||||||||||||||  ||||   || ||||||||||||||||||||||||    
T  4570126 tggtgttgttatattttcttttgctccctttatcttgtttattccttg-ctttggattgtggttttgctatgcacttg 4570202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 9581352 - 9581450
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9581352 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 9581450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 260
Target Start/End: Original strand, 36018929 - 36019159
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||  || ||     |||||||||||||| ||||||||| |||    
T  36018929 tttgtatctctttgtaagaactcatt-atagtggattggagaggtcaatctctcccccag--tatgtttg--ttggaccgaactggatgaacattttttg 36019023  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| ||| ||| |||| |||||||||||||||||||||||| | ||||||||||||||||||| ||  |||||| ||| |||| ||| ||||  |||||     
T  36019024 gtgttgt-tatcttttttctactctctttatcttgtttatcctttggttagattgtggttttgttaaacacttgttttctagattagatctagattgtta 36019122  T
Q  224 ttattgcttgtggttatttacatttgattattggttg 260  Q
    || ||||||||||| ||||||||||||||||||||||    
T  36019123 ttgttgcttgtggtaatttacatttgattattggttg 36019159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 7762341 - 7762433
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7762341 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 7762433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 46173427 - 46173621
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||| | | ||| |    
T  46173427 aacccatttgtatctctttgtaagaattcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactagatcaacaa 46173525  T
Q  118 tttcttggtgctgtctat-ttttc-tctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggt 212  Q
    |||||||||| ||| ||| ||||| | | || |||||||||||||||| |  | ||| ||||||||||||||||||||||||||||||||| |||||    
T  46173526 tttcttggtgttgt-tatcttttcttttgctttctttatcttgtttatttcttagttggattgtggttttgctatgcacttggtttatagaataggt 46173621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 19683987 - 19683889
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19683987 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 19683889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 45095233 - 45095331
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45095233 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaaca 45095331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 47304321 - 47304543
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||| ||| |    
T  47304321 aacccatctgtatctcttcgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtcaagttt-gaccgaactgggtcaacaa 47304419  T
Q  118 tttcttggtgctg---tctatttttctc---tactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactagg 211  Q
    ||| |||||| ||   ||| || || ||   | || ||||||||||||||||    | ||| ||||||||||||||||||||||||||||||||||||||    
T  47304420 tttattggtgttgttatcttttcttttcttttgctttctttatcttgtttattccttagttggattgtggttttgctatgcacttggtttatagactagg 47304519  T
Q  212 tctattttgtttttattgcttgtg 235  Q
    ||||| || || || |||||||||    
T  47304520 tctatattattgttgttgcttgtg 47304543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 34491286 - 34491379
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34491286 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 34491379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 37408528 - 37408626
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37408528 aacccttttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcaagtttggatcgaactgggtgaaca 37408626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 23198037 - 23197939
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23198037 aacccttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 23197939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 23200236 - 23200138
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23200236 aacccttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 23200138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 7764540 - 7764632
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  7764540 tttgtatctctttgtaagaactcattgatagtggattggagagatgaatctctcctccagagtaggtcaaatttagaccgaactgggtgaaca 7764632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 801178 - 801260
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  801178 tttgtaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 801260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 5258242 - 5258144
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  5258242 aacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccagagtaggtcaagtttggaccgaacttggtgaaca 5258144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 9636224 - 9636126
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  9636224 aacccttttgtatctttttgtaagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaactgggtgaaca 9636126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 5260421 - 5260323
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  5260421 aacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccaaagtaggtcaagtttggaccgaacttggtgaaca 5260323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 7780086 - 7780004
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||    
T  7780086 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccaaagtgggtgaaca 7780004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 29196484 - 29196387
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  29196484 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaag-ttggaccgaactgggtcaaca 29196387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 16499100 - 16499196
Alignment:
Q  20 acccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||    
T  16499100 acccatttatatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggttaag-ttggaccgaactgggtcaaca 16499196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 40735459 - 40735545
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  40735459 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggt 40735545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 44331618 - 44331712
Alignment:
Q  22 ccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  44331618 ccatttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 44331712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 760917 - 761053
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| ||| ||||| ||||     
T  760917 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggactgaaatgggttaacaa 761015  T
Q  119 ttcttggtgctgtctatttttctctactctctttatctt 157  Q
    |  |||||| ||| | ||| ||||| |||||||||||||    
T  761016 tctttggtg-tgtttgtttctctcttctctctttatctt 761053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 6716585 - 6716667
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6716585 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 29810938 - 29811016
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  29810938 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagtt 29811016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 54635210 - 54635292
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54635210 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 54635292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 45283071 - 45283167
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttcttggtgct 129  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  45283071 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctcttggtgct 45283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 22835100 - 22835010
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  22835100 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctccgccatattaggtcaag-ttggaccgaactgg 22835010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 3617540 - 3617618
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3617540 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 3617618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 40734572 - 40734665
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  40734572 catttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaag-ttggaccgaactgggtcaaca 40734665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 29682430 - 29682526
Alignment:
Q  20 acccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||| |||||||||||||||| ||||    
T  29682430 acccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattagatcaag-ttggaccgaactgggtcaaca 29682526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 32891178 - 32891281
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||||| | |||||||||||||| | | |||||||    
T  32891178 catttgtatctctttgtaagaactcgttgatagtggattggagagataaatctctcccccggagtaggtcatg-ttggaccgaactggataatcatttct 32891276  T
Q  123 tggtg 127  Q
    |||||    
T  32891277 tggtg 32891281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 53921585 - 53921498
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||| | ||||||||||    
T  53921585 tttgtaagaactcattgatagtggattggagagatcaatctctcccccggagtagatcaagttt-gaccgaactggataaacatttctt 53921498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 25637517 - 25637592
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25637517 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtga 25637592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 29813133 - 29813230
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||||| ||||    
T  29813133 aacccatttgcatctctttgtaagaactcatttatagtggattggagagatcaatctctcccccagatttggtcatg-ttggaccgaactgggtcaaca 29813230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 51398888 - 51398981
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||| |||||||||||| ||| ||||    
T  51398888 catttgtatctctttgtaagaactcattgatagtggattggagagatttatctctcccccagattaggtcaag-ttggaccgaacttggtcaaca 51398981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 4598601 - 4598526
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  4598601 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 4598526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 10056309 - 10056384
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  10056309 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 10056384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 10058531 - 10058606
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  10058531 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 10058606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 10060753 - 10060828
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  10060753 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 10060828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 10062975 - 10063050
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  10062975 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 10063050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 10065197 - 10065272
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  10065197 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 10065272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 10211485 - 10211560
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  10211485 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 10211560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 5236554 - 5236458
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||| ||| ||||| |||||||| |||||||| |||||||| ||||    
T  5236554 aacccatttgtatctctttgtaagaactcattgataatggattcgagagatcaatctttcc-ccagattaggtcaa-tttggaccaaactgggtcaaca 5236458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 31314515 - 31314604
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactg 109  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||||| ||| | ||||||||| |||||||||||||    
T  31314515 aacccatttgtatctttttgtaagaactctttgatagtggattggagagatcaatatctcccccatattaggtcaag-ttggaccgaactg 31314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 39153455 - 39153362
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||  |||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||| ||||||||| ||||    
T  39153455 catttgtatccctttataagaactcattgatagtggattggagagaacaatctctcccccagattaggtcaag-ttggactgaactgggtcaaca 39153362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 44700576 - 44700480
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||| ||| ||||    
T  44700576 aacctatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcc-ccacattaggtcaag-ttggaccgaactaggtcaaca 44700480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 2075149 - 2075039
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgctgtctatttttctc 142  Q
    |||| |||||||||||||| ||||||||||||||||| | ||||||||||||| ||||| |||||||||| ||||||||| |||| ||| ||  ||||||    
T  2075149 aactaattgatagtggatttgagagatcaatctctccccgagagtaggtcaag-ttggatcgaactgggtaaacatttctgggtg-tgttta--tttctc 2075054  T
Q  143 tactctctttatctt 157  Q
    | |||||||||||||    
T  2075053 ttctctctttatctt 2075039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 4600822 - 4600747
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||    
T  4600822 aagaactcatttgatagtggattggagagtacaaactctcctctagagtaggtcaagtttggaccgaactgggtga 4600747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 10209265 - 10209340
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||    
T  10209265 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccaaactgggtga 10209340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 23392007 - 23391910
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||  ||||| |||||||| |||||||||||||| |||||| ||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  23392007 aacccatttgtatcactttgcaagaactctttgatagtggattgtagagataaatctctcccccaaattaggtcaag-ttggaccgaactgggtcaaca 23391910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 31340191 - 31340101
Alignment:
Q  148 tctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtggtt 238  Q
    ||||||||||||||||    | ||| ||||||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||    
T  31340191 tctttatcttgtttattccttagttggattgtggttttgctatgcacttggtttatagactaggtctatattattgttgttgcttgtggtt 31340101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 32744530 - 32744437
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||  |||||||||||||| |||||||||||||| |||||| ||||| ||| ||||| ||||||||| |||||||||||||||| ||||    
T  32744530 catttgtatcactttgtaagaactctttgatagtggattgaagagataaatctatcccccagattaggtcaag-ttggaccgaactgggtcaaca 32744437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 27305777 - 27305705
Alignment:
Q  50 tgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||  |||||||||    
T  27305777 tgatagtggattggagagatcaatctctcctccaaagtaggtcaa-tttggaccgaactgtgtatacatttctt 27305705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 9666550 - 9666467
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||| || |||||||||||||||||||||  |||||||| ||||| ||||| ||| |||||||||||||||| ||||    
T  9666550 tctttgtaagaattctttgatagtggattggagagattgatctctcccccagattaggtaaag-ttggaccgaactgggtcaaca 9666467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 51352206 - 51352150
Alignment:
Q  22 ccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctc 78  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  51352206 ccatttgtatttctttgtaataactcattgagagtggatttgagagatcaatctctc 51352150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 23410427 - 23410349
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    |||||||||||||  |||||||||||||| | |||| |||||||||||||| ||||||||| ||| | |||||||||||    
T  23410427 aacccatttgtatcactttgtaagaactcttagataatggattggagagataaatctctcccccaaattaggtcaagtt 23410349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 33191922 - 33192008
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtg 127  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||   ||||||  |||| ||| ||||||| ||||||    
T  33191922 aagaactcattgatagtggattagagagatcaatctct-ctccagaggaggtcattgttggacaaaacttggtaaacattttttggtg 33192008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 10067435 - 10067471
Alignment:
Q  78 cctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    |||||||||||||||||||||||||||||||||||||    
T  10067435 cctccagagtaggtcaagtttggaccgaactgggtga 10067471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 4055856 - 4055769
Alignment:
Q  25 tttgtatttctttgtaagaa-ctcattgatagtggattggagagatcaatctctcctccaga-gtaggtcaagtttggaccgaactgggt 112  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||  ||||||| ||||| ||||||||   |||| |||||||||||    
T  4055856 tttgtatctctttgtaagaaactcattgatagtggattgaagagatc--tctctcccccagatgtaggtcattgttgggccgaactgggt 4055769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 5433944 - 5433906
Alignment:
Q  55 gtggattggagagatcaatctctcctccagagtaggtca 93  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  5433944 gtggattggagagatcaatctctcctccatagtaggtca 5433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 5270559 - 5270623
Alignment:
Q  136 ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt 200  Q
    |||||||||||||||||||| |||||||  | ||||| ||||||||||||||  | |||||||||    
T  5270559 ttttctctactctctttatcatgtttattctttggttcgattgtggttttgcattacacttggtt 5270623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 20937844 - 20937923
Alignment:
Q  136 ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtcta 215  Q
    ||||||||||||||||||||||||||||  | ||||| ||||||| |||| || | |||||| || ||||| ||| ||||    
T  20937844 ttttctctactctctttatcttgtttattatttggttcgattgtgattttactttacacttgattaatagattagatcta 20937923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 4075563 - 4075476
Alignment:
Q  25 tttgtatttctttgtaagaa-ctcattgatagtggattggagagatcaatctctcctccaga-gtaggtcaagtttggaccgaactgggt 112  Q
    |||||||  ||||||||||| ||| |||||||||||||||||||||||  |||||| ||||| ||||||||   |||| |||||||||||    
T  4075563 tttgtatcactttgtaagaaactctttgatagtggattggagagatca--ctctcccccagatgtaggtcattgttgggccgaactgggt 4075476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 1683661 - 1683710
Alignment:
Q  137 tttctctactctctttatcttgttta-tcttgtggttagattgtggtttt 185  Q
    |||||||||||||||||||||||||| | || ||||| ||||||||||||    
T  1683661 tttctctactctctttatcttgtttatttttttggttcgattgtggtttt 1683710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 35138798 - 35138746
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctc 76  Q
    ||||||| ||||||||| ||||||||||||||||||| | ||||| |||||||    
T  35138798 tttgtatctctttgtaaagaactcattgatagtggatggaagagaacaatctc 35138746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 3e-88; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 379450 - 379693
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||    
T  379450 aacccatttgtatcgctttgtaagaactaattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaacat 379549  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  379550 ttcttggtgttgt-tatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactaggtctata 379648  T
Q  218 ttgtttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||    
T  379649 ttgttgttgttgtttgtggttatttacatttgattattggttgcc 379693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 25 - 262
Target Start/End: Original strand, 2209790 - 2210031
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt-tctt 123  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| | ||||    
T  2209790 tttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctctt 2209889  T
Q  124 ggtgctgt---ctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttg 220  Q
    |||| |||   ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||  |||    
T  2209890 ggtgttgttgtctatttttctctactctctttatcttgtttatcatttggttagattgtggttttgctatgcacttgttttctagattagatctagattg 2209989  T
Q  221 tttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    || |||||| ||||||||||||||||||| ||||||||||||    
T  2209990 ttgttattgtttgtggttatttacatttggttattggttgcc 2210031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 25 - 262
Target Start/End: Original strand, 41964492 - 41964726
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  41964492 tttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt-ggaccgaactgggtgagcatttcttg 41964590  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| ||| ||| |||||| ||||||||  |||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||  |||||     
T  41964591 gtgttgt-tatcttttctttactctct--atcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattgttg 41964687  T
Q  224 ttattgcttgtggttatttacatttgattattggttgcc 262  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  41964688 ttattgcttgtggttatttacatttgattgttggttgcc 41964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 40632515 - 40632758
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| |||||||||||||| |||||    
T  40632515 aacctatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctaaagtaagtcaagtt-ggaccgaactgggtaaacat 40632613  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||| | |||||||||||||||||||||| | |||||  ||||||||||||| ||||||||||| ||||||||||||||||     
T  40632614 ttcttggtgttgt-tatcttttttttactctctttatcttgtttatcctttggttgaattgtggttttgccatgcacttggtatatagactaggtctata 40632712  T
Q  218 ttgtttttattgcttgtgg-ttatttacatttgattattggttgcc 262  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  40632713 ttgttgttattgcttgtggtttatttacatttggttattggttgcc 40632758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 50673941 - 50673705
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  50673941 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtgaacatttct 50673843  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatttt 219  Q
    ||||| ||| ||| |||||| |||||||||||||||||||||  ||||   || ||||||||||||||||||||||| | ||||||||||| ||||| ||    
T  50673842 tggtgttgt-tatcttttctttactctctttatcttgtttattccttg-ctttggattgtggttttgctatgcactt-gattatagactagatctatatt 50673746  T
Q  220 gtttttattgcttgtggttatttacatttgattattggttg 260  Q
    ||| ||||||||| |||| ||||||||||| ||||||||||    
T  50673745 gttgttattgcttatggtgatttacatttggttattggttg 50673705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 12073466 - 12073681
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||| |||||||||||||    
T  12073466 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcttccagagtaggtcattgttggaccgaactaggtgaacatttct 12073565  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgt 221  Q
    ||||| ||| ||| |||||| |||||||||||||||||||||  | ||||||||||||||||||| |||||||||||||| |||| ||| ||||  ||||    
T  12073566 tggtgttgt-tatcttttctttactctctttatcttgtttattctttggttagattgtggttttgttatgcacttggtttctagattagatctagattgt 12073664  T
Q  222 ttttattgcttgtggtt 238  Q
    | || ||||||||||||    
T  12073665 tgttgttgcttgtggtt 12073681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 35662515 - 35662730
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||  ||||||||| |    
T  35662515 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatatctcctcaagagtaggtcaag-ttggaccgaactgaatgaacattttt 35662613  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgt 221  Q
    ||||| ||| ||| |||||| |||||||||||||||||||||    ||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  35662614 tggtgttgt-tatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttatagactatgtctatattgt 35662712  T
Q  222 ttttattgcttgtggtta 239  Q
    | || |||||| ||||||    
T  35662713 tgttgttgcttatggtta 35662730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 41639496 - 41639691
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  41639496 aacccatttgtatctatttgtaagaactcatcgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaacat 41639594  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    ||||||||| ||| |||  ||||| |||||||||||||||||||||| | |||||  |||||||||||||||||||||| | |||||||||||||||||    
T  41639595 ttcttggtgttgt-tatcgtttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcactt-gattatagactaggtctat 41639691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 6656030 - 6656203
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  6656030 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaag-ttggaccgaattgggtgaacatttct 6656128  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    ||||| ||| ||| |||||| |||||||||||||||||||||| | | ||| ||||||||||||||||||||||||    
T  6656129 tggtgttgt-tatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctatgcacttg 6656203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 8648209 - 8648433
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  8648209 aacccatttgtatctctttgtaagaactcattgatattggattggagagatcaatctctcctccagagtaggtcaag-ttggaccaaactgggtgaacat 8648307  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt---tatagactaggtc- 213  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||    ||||| |||||||||||||||||||| ||| ||    ||||||||||||     
T  8648308 ttcttggtgttgt-tatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcatttgattatagatagactaggtct 8648406  T
Q  214 -tattttgtttttattgcttgtggtta 239  Q
     ||| ||||| || |||||||||||||    
T  8648407 atatattgttgttgttgcttgtggtta 8648433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 46703577 - 46703740
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||    
T  46703577 tttgtatctctttgtaagaactcatttatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattgggtgaacatttcttg 46703676  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgct 188  Q
    ||| ||| ||| |||||| |||||||||||||||||||||| | |||||||||||||||||||||    
T  46703677 gtgttgt-tatcttttctttactctctttatcttgtttatcatttggttagattgtggttttgct 46703740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 8665478 - 8665651
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||    
T  8665478 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccaaactaggtgtacat 8665576  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgca 193  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||    ||||| ||||||||||||||||||||    
T  8665577 ttcttggtgttgt-tatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgca 8665651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 54883090 - 54883278
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||||||||||||||| ||| |    
T  54883090 aacccatttgtatctctttgtaagaactcattgatagtggattggagggatcaatctctcctccagattaagtcaag-ttggaccgaactgggtcaacaa 54883188  T
Q  118 tttcttggtgctg-tctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttataga 206  Q
    |||||||||| || | | ||||||| ||||||||||||||| |||||  | |||||  |||||||||||||| |||| ||||||||||||    
T  54883189 tttcttggtgttgttatctttttctttactctctttatcttatttattctttggttgaattgtggttttgctctgcatttggtttataga 54883278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 56178735 - 56178637
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56178735 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 56178637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 50262799 - 50262574
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||   |||||||||||||||||||| |    
T  50262799 aacccatttgtatctctttgtaagaactcattgatagttgattggagatatcaatctttcctccagagtaggtcattgttggaccgaactgggtgaacaa 50262700  T
Q  118 tttcttgg---tgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtc- 213  Q
    | ||||||   || |||||||||||||||||||| ||||||||||||||    |  || |||||||||||||| |||||||| | ||| | ||||||||     
T  50262699 tctcttggtgttgttgtctatttttctctactctttttatcttgtttattccttacttggattgtggttttgccatgcactt-gattacatactaggtct 50262601  T
Q  214 -tattttgtttttattgcttgtggtta 239  Q
     ||| ||||| || |||||||||||||    
T  50262600 atatattgttgttgttgcttgtggtta 50262574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 26364310 - 26364502
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttc 121  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||||||||| ||| |||||    
T  26364310 catttgtatctctttgtaagaactcattaatagtggattggagagatcaatctctcccccagattaggtcaagttt-gactgaactgggtcaacaatttc 26364408  T
Q  122 ttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    |||||| ||| ||| |||||| |||||||||||||||||||||    || || ||||||||||||||||| |||||   |||||||||||||||||    
T  26364409 ttggtgttgt-tatcttttctttactctctttatcttgtttattccttgcttggattgtggttttgctatacactt-aattatagactaggtctat 26364502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 27417063 - 27416886
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| || ||||     
T  27417063 aacccatttgtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgagtcaacaa 27416965  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    |  |||||| ||| ||| || ||| |||||||||||||||||||||  | ||||| |||||||||||||| |||||||||    
T  27416964 tctttggtgttgt-tatcttgtctttactctctttatcttgtttattctttggttggattgtggttttgccatgcacttg 27416886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 29999888 - 29999804
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29999888 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt 29999804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 12119609 - 12119810
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac- 116  Q
    ||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||   |||||||||||| |||||||     
T  12119609 aacccttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctcc-caagagtaggtcattgttggaccgaactaggtgaaca 12119707  T
Q  117 atttcttggtgctg---tcta-tttttctctactctctttatcttgttta-tcttgtggttagattgtggttttgctatgcacttggtttatagactagg 211  Q
    ||||||||||| ||   |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||||||| |||| |||| |||     
T  12119708 atttcttggtgttgtcatctattttttctctactctctttatcttgtttagtctt-tggtccgattgtggttttgctatgcacttagtttctagattaga 12119806  T
Q  212 tcta 215  Q
    ||||    
T  12119807 tcta 12119810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 52095460 - 52095353
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  52095460 aacccatttgtatctctttgtaagaaatctttgatagtggattggagagatcaatctctcctccagagtagg-caagtttggaccgaactgggtgaacaa 52095362  T
Q  119 ttcttggtg 127  Q
    || ||||||    
T  52095361 tttttggtg 52095353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 33989920 - 33990138
Alignment:
Q  25 tttgtatttctttgtaag-aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| |||||||||  ||||| || |||||||||||||||||||||||||||| |||||||||||||   |||||  ||||||||| ||||||||||    
T  33989920 tttgtatctctttgtaaataactcgttaatagtggattggagagatcaatctctccaccagagtaggtcattcttggattgaactgggtaaacatttctt 33990019  T
Q  124 ggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtt 222  Q
    |||| | | ||| |||| |||||||||||||||||||||||  | |||||  ||| ||| ||||||||||||||||||| |||| ||| ||||  |||||    
T  33990020 ggtgttat-tatattttttctactctctttatcttgtttattctttggttcaattctggatttgctatgcacttggtttctagattagatctagattgtt 33990118  T
Q  223 tttattgcttgtggttattt 242  Q
     || ||||||||| ||||||    
T  33990119 gttgttgcttgtgtttattt 33990138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 5370181 - 5370083
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5370181 aacccttttgtatctctttgtaagaactcattgatagtggactagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaaca 5370083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 48143113 - 48143211
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48143113 aacccttttgtatctcttcataagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccaaactgggtgaaca 48143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 6542271 - 6542170
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||||||    
T  6542271 tttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagggtaggtcaag-ttggaccgaactgggtaaacatttcttg 6542173  T
Q  125 gtg 127  Q
    |||    
T  6542172 gtg 6542170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 26175734 - 26175637
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  26175734 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 26175637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 31495398 - 31495316
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31495398 tttgtaagaactcattgatagttgattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 31495316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 13992374 - 13992293
Alignment:
Q  36 ttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13992374 ttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaaca 13992293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 26699535 - 26699344
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||   |||||||||||||   |||||||||||||||| || |||||||    
T  26699535 tttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtaggtcattgttggaccgaactgggtaaaaatttctt 26699436  T
Q  124 ggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtcta 215  Q
     |||| || ||| |||||| |||||||||||||||||||||  | |||||  ||| |||||||||||||||||||| || |||| ||| ||||    
T  26699435 agtgccgt-tatcttttctttactctctttatcttgtttattctttggttcaattatggttttgctatgcacttggattctagattagatcta 26699344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 9927556 - 9927467
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactg 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  9927556 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactg 9927467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 12744023 - 12743926
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  12744023 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 12743926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 12745412 - 12745315
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  12745412 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 12745315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 31474225 - 31474328
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||| ||||| |||    
T  31474225 catttgtatctctttgtaagaactcattgatagttgattggagagataaatctctccaccagagtagatcaag-ttggaccgaactgggtaaacatatct 31474323  T
Q  123 tggtg 127  Q
    |||||    
T  31474324 tggtg 31474328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 8393479 - 8393562
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8393479 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 8393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 8395688 - 8395771
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8395688 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 8395771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 5429749 - 5429846
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||| ||||    
T  5429749 aacccatttgtatctatttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggttaag-ttggaccgaactgggtcaaca 5429846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 12739648 - 12739551
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  12739648 aacccatttgtatctatttgtatgaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 12739551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 36463487 - 36463390
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  36463487 aacccatttgtatctctttgtaagaactctttgacagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 36463390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 37740695 - 37740784
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactg 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||    
T  37740695 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttggtcaag-ttggaccgaactg 37740784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 48893732 - 48893639
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  48893732 catttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 48893639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 46703742 - 46703860
Alignment:
Q  143 tactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtc--tattttgtttttattgcttgtggttat 240  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||| ||||||  ||| ||||| || ||||||| ||||||    
T  46703742 tactctctttatcttgtttatcctttggttagattgtggttttgctatgcactt-gattatagaataggtctatatattgttgttgttgcttgaggttat 46703840  T
Q  241 ttacatttgattattggttg 260  Q
    ||||||||| ||||||||||    
T  46703841 ttacatttggttattggttg 46703860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 34570512 - 34570415
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||| |||||||||| ||||    
T  34570512 aacccaattgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggttaag-ttggatcgaactgggtcaaca 34570415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 36994594 - 36994691
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||||| |||||||||||||||| ||||    
T  36994594 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattagatcaag-ttggaccgaactgggtcaaca 36994691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 47038505 - 47038412
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||    
T  47038505 catttgtatctgtttgtaaggactcattgatagtggattggagagatcaatctctcccccagagtaagtcaag-ttggaccgaactgggtcaaca 47038412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 4588029 - 4588136
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||||| ||| ||||||| |||||||| |||||    
T  4588029 aacccttttgtatctctttgtaagaactcattgatagtggattggagagaacaatctctcccccataataggtgaag-ttggaccaaactgggtaaacat 4588127  T
Q  119 ttcttggtg 127  Q
    ||| |||||    
T  4588128 ttcatggtg 4588136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 37229805 - 37229714
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttgg 125  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||||| |||||||||||| ||| ||||||||||||    
T  37229805 tctttgtaagaactcatttatagtggattggagagatcaatctctccctcatagtaggtcaag-ttggaccgaactaggtaaacatttcttgg 37229714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 29254563 - 29254661
Alignment:
Q  18 caacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||  ||| | ||||||||| |||||||||||||||| ||||    
T  29254563 caacccatttgtgtctctttgtaagaactcgttgatagtggattggagagatcaatctctctcccaaattaggtcaag-ttggaccgaactgggtcaaca 29254661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 45687276 - 45687183
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| | || |||||| |||||||||||||||| ||||    
T  45687276 catttgtatctatttgtaagaactcattgatagtggattggagagatctatctctcctccatattatgtcaag-ttggaccgaactgggtcaaca 45687183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 46147485 - 46147392
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  46147485 catttgtatctctttgtaagaactctttgatagtggattggagacatcaatctctcccccaaattaggtcaag-ttggaccgaactgggtcaaca 46147392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 5207924 - 5207805
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgctgtcta 134  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||| ||| ||||| ||||||| |||||| ||| |     
T  5207924 tttgtaagaactcattgatagtggattggaaagatcaatctctctcccagagtaggtcaa-tttggactgaattgggtaaacatttattggtg-tgtatt 5207827  T
Q  135 tttttctctactctctttatct 156  Q
    | ||||||| |||| |||||||    
T  5207826 tgtttctcttctctatttatct 5207805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 3913518 - 3913578
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcc 79  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3913518 aacccatttgtatatctttgtaagaactcattgatagtggattggagagatcaatctctcc 3913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 51337134 - 51337241
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||  || | ||||||||| |||||||||||||||| |||||    
T  51337134 aacccttttgtatctctttttaagaactcattgatagtgtattagagagatcaatctctcccacacattaggtcaag-ttggaccgaactgggtaaacat 51337232  T
Q  119 ttcttggtg 127  Q
    ||| |||||    
T  51337233 ttcgtggtg 51337241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 54200004 - 54199898
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||| ||||||||| ||||| |||||||||| ||||     
T  54200004 aacccatttgtatctctttgtaagaactcattgatagtgaattagagagatcattctctcccccagattaggtcaag-ttgga-cgaactgggtcaacaa 54199907  T
Q  119 ttcttggtg 127  Q
    || ||||||    
T  54199906 tttttggtg 54199898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 5136155 - 5136230
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  5136155 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 5136230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 5138380 - 5138455
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  5138380 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 5138455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 33089970 - 33090129
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttc-ttggtgctgtctatttt 138  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |   |||||||| ||| | | |||| ||| |||  | |||    |||    
T  33089970 aagaactcattgatagtggattagagagatcaatctctcctctagagtaggttattgttggaccggactagataaacaattctttgaagttgttctcttt 33090069  T
Q  139 tctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttgg 198  Q
    ||||| ||||||||||||||||||| || ||||| ||||||||||||||| | |||||||    
T  33090070 tctctgctctctttatcttgtttattttttggttcgattgtggttttgctttacacttgg 33090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 5871890 - 5871987
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| |||  ||||| |||||||| ||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||||    
T  5871890 aacccatttttatcactttgcaagaactctttgatagtggattagagagatcaatctctcccccagattaggtcaagttt-gaccgaactgggtcaaca 5871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 12744145 - 12744087
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctct 77  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12744145 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 12745534 - 12745476
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctct 77  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12745534 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 13009538 - 13009464
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||    
T  13009538 catttgtatccctttgtaagaactcattgatagtggattggagagatcgatctctcctccaaattaggtcaagtt 13009464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 52467452 - 52467355
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||  |||||||| ||||  ||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||| ||||    
T  52467452 aacccatttgtatcactttgtaataactttttgatagtggattggagagatcaatctctccccgagattaggtcaag-ttggaccgaactgggtcaaca 52467355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 12747854 - 12747794
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcc 79  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  12747854 aacccatttgtatctatttgtatgaactcattgatagtggattggagagatcaatctctcc 12747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 55085423 - 55085320
Alignment:
Q  136 ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtg 235  Q
    |||||| |||||||||||||||||||||    ||||| |||||||||||||||||||||||||||| || | ||| ||||  ||||| |||||||||||     
T  55085423 ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttctaaattagatctagattgttgttattgcttgta 55085324  T
Q  236 gtta 239  Q
    ||||    
T  55085323 gtta 55085320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 7124992 - 7125070
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    ||||||||||||||||||    
T  7124992 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagcaaagaccgaactgggtgaaca 7125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 22882849 - 22882709
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||| |||| |||||||||| ||||||||| |||| ||||||||| ||  | ||||||||||   |||||||||||||| | ||||    
T  22882849 aacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc--cggagtaggtcattgttggaccgaactggataaaca 22882752  T
Q  118 tttcttggtgctgtctatttttctctactctctttatcttgtttat 163  Q
    |||||||||| | |   ||||||| ||||||||||||||| |||||    
T  22882751 tttcttggtgttat---tttttctatactctctttatcttatttat 22882709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 22934513 - 22934373
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||| |||| |||||||||| ||||||||| |||| ||||||||| ||  | ||||||||||   |||||||||||||| | ||||    
T  22934513 aacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc--cggagtaggtcattgttggaccgaactggataaaca 22934416  T
Q  118 tttcttggtgctgtctatttttctctactctctttatcttgtttat 163  Q
    |||||||||| | |   ||||||| ||||||||||||||| |||||    
T  22934415 tttcttggtgttat---tttttctatactctctttatcttatttat 22934373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 52082755 - 52082664
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||| || |||||||||||       ||||| |||||||||||||||||||||||||| ||||||  ||||||||||    
T  52082755 aacccatttgtatctctttgtaagaaatctttgatagtgga-------gatcattctctcctccagagtaggtcaagtttagaccgatttgggtgaaca 52082664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 7122773 - 7122851
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  |||||||||||||| |||||||||||    ||||||||||||||||||    
T  7122773 aagaactcatttgatagtggattggagagtacaatctctcctccatagtaggtcaagcaaagaccgaactgggtgaaca 7122851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 21703912 - 21703829
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||||||||| ||||||||||||| |||||||| ||| ||| |||||||||   || ||||||||||||| |||||||||||    
T  21703912 aagaactcattgacagtggattggagatatcaatctatcc-ccatagtaggtcattgtttgaccgaactgggtaaacatttcttg 21703829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 24969186 - 24969238
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatct 75  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||||    
T  24969186 catttgtatctctttgtaagaactaattgatagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 21688323 - 21688397
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    ||||||||| |||| | ||||||||||||||| || |||||||||||||||| |||| | ||| |||||||||||    
T  21688323 catttgtatctcttcggaagaactcattgataatgaattggagagatcaatccctcccctagattaggtcaagtt 21688397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 38811262 - 38811144
Alignment:
Q  44 actcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt-ggtgctgtctatttttctc 142  Q
    |||||||||||||| |  |||||||||  ||||||| | |||||||||||   |||||||||||||||| |||| ||||| |||| |||    |||||||    
T  38811262 actcattgatagtgaagcggagagatc--tctctccccaagagtaggtcattgttggaccgaactgggtaaacaattcttcggtgttgttctcttttctc 38811165  T
Q  143 tactctctttatcttgtttat 163  Q
    |||||||||||| ||||||||    
T  38811164 tactctctttatattgtttat 38811144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 24969787 - 24969842
Alignment:
Q  71 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtg 127  Q
    ||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  24969787 aatctatcccccagagtaggtcaagtt-ggaccgaactgggtaaacatttcttggtg 24969842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 44967925 - 44967823
Alignment:
Q  22 ccatttgtatttctttgtaagaa-ctcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacattt 120  Q
    |||||||||| ||||||||| || ||| |||| ||| |||| ||| ||||||||||||| ||||| || ||||   ||||||||| |||||| |||||||    
T  44967925 ccatttgtatctctttgtaaaaaactcgttgagagtagattagagggatcaatctctcccccagaataagtcactgttggaccgacctgggtaaacattt 44967826  T
Q  121 ctt 123  Q
    |||    
T  44967825 ctt 44967823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 21688470 - 21688535
Alignment:
Q  174 gattgtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtggtta 239  Q
    ||||||||||||| |||||| ||| |||||||||||| ||||| || || || |||||||||||||    
T  21688470 gattgtggttttgttatgcatttgatttatagactagatctatattattgttgttgcttgtggtta 21688535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 37755034 - 37754986
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggt 91  Q
    |||||||||||| ||| ||| |||||||||||||||| ||| |||||||    
T  37755034 aactcattgataatggtttgaagagatcaatctctcccccatagtaggt 37754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 4283594 - 4283812
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  4283594 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtaggtcaagtt-ggaccgaactgggtgaacat 4283692  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||     
T  4283693 ttcttggtgttgt-tatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcacttggtttatagactaggtctata 4283791  T
Q  218 ttgtttttattgcttgtggtt 238  Q
    ||||| |||||||||||||||    
T  4283792 ttgttgttattgcttgtggtt 4283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 23 - 256
Target Start/End: Original strand, 11384059 - 11384291
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||||| |    
T  11384059 catttgtatctctttgtaagaacccattgatactggattggagacatcgatctctcctccagagtaggttaagtt-ggaccgaactgggtgaacattttt 11384157  T
Q  123 tggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtt 222  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||  |||||    
T  11384158 tggtgttgtctatttttctttactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattgtt 11384257  T
Q  223 tttattgcttgtggttatttacatttgattattg 256  Q
     |||||||||||||||||||||||||| ||||||    
T  11384258 gttattgcttgtggttatttacatttggttattg 11384291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 18655470 - 18655713
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  18655470 aacccatttgtatctctttgtaagaactcattgatagtggattagagagatcaatctctcctccaaagtaggtcaag-ttggaccgaactgggtgaacat 18655568  T
Q  119 ttcttggtgctgtctat-ttttctcta--ctctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtc 213  Q
    || |||||| ||| ||| |||||| ||  |||||||||||||||||||  ||||   || ||||||||||||||||||||||||||||||||||||| ||    
T  18655569 tttttggtgttgt-tatcttttctttactctctctttatcttgtttattccttg-ctttggattgtggttttgctatgcacttggtttatagactagatc 18655666  T
Q  214 tattttgtttttattgcttgtggttatttacatttgattattggttg 260  Q
    ||| ||||| |||||||||||| ||||||||||||| ||||||||||    
T  18655667 tatattgttgttattgcttgtgtttatttacatttggttattggttg 18655713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 25 - 260
Target Start/End: Original strand, 40328856 - 40329086
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||| |||||| ||||||||||||||    
T  40328856 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggt-----ttggacggaactgagtgaacatttcttg 40328950  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| ||| ||| |||||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||   ||||     
T  40328951 gtgttgt-tatcttttctctactctccttttcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagactgttg 40329049  T
Q  224 ttattgcttgtggttatttacatttgattattggttg 260  Q
    |||||||||||||||||||||||||| || |||||||    
T  40329050 ttattgcttgtggttatttacatttggttgttggttg 40329086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 42435089 - 42434868
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42435089 aacccatttgtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 42434991  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtcta 215  Q
    ||||||||| ||| ||| |||||| |||| ||||||||||||||||  ||||   || ||||||||||||||||||||||| | ||||||||||||||||    
T  42434990 ttcttggtgttgt-tatcttttctttactttctttatcttgtttattccttg-ctttggattgtggttttgctatgcactt-gattatagactaggtcta 42434894  T
Q  216 --ttttgtttttattgcttgtggtta 239  Q
      | ||||| || |||||||||||||    
T  42434893 tctattgttgttgttgcttgtggtta 42434868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 262
Target Start/End: Original strand, 3772266 - 3772504
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||||||||| ||   |||||||||||||||| ||||| |||||| | || ||||||    
T  3772266 catttgtatatctttgtaagaatttattgatagtggattggagagatcaatctatctctcagagtaggtcaagtt-ggaccaaactggataaatatttct 3772364  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgt 221  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| ||| |||| ||  ||||  ||||    
T  3772365 tggtggtgt-tatcttttctctactctctttatcttgtttattctttggttagattgtggttttgctatgcacttgatttctagattaaatctagattgt 3772463  T
Q  222 ttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    | || |||||||||||||||| | |||| | ||||||||||    
T  3772464 tgttgttgcttgtggttattttcttttggtgattggttgcc 3772504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 42498264 - 42498362
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42498264 aacccttttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 42498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 40221815 - 40221992
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| || |     
T  40221815 aacccatttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaataa 40221913  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    |  |||||| ||| ||| || ||| |||||||||||||||||| ||  | ||||| ||||||||||||||||||||||||    
T  40221914 tctttggtgttgt-tatcttgtctttactctctttatcttgttcattctttggttggattgtggttttgctatgcacttg 40221992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 34256605 - 34256507
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34256605 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaaca 34256507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 17982723 - 17982821
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17982723 aacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 17982821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 34254429 - 34254331
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34254429 aacccttttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaaca 34254331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 10930297 - 10930118
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||| |    
T  10930297 aacccatttatatctctttgtaagaacacattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaa 10930199  T
Q  118 tttcttggtgctgtctat-ttttc-tctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    |||||||||| ||| ||| ||||| | | ||| |||||||||||||||  | | ||| ||||||||||||||||||||||||    
T  10930198 tttcttggtgttgt-tatcttttcttttgctccctttatcttgtttattcttttgttggattgtggttttgctatgcacttg 10930118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 31218327 - 31218425
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31218327 aacccttttgtatctctttggaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 31218425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 2627811 - 2627902
Alignment:
Q  25 tttgtatttctt-tgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 115  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2627811 tttgtatctcttgtgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 2627902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 1746316 - 1746219
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1746316 aacccttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 1746219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 33352220 - 33352317
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  33352220 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 33352317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 19945451 - 19945359
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  19945451 tttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctcgagagtaggtcaagtttgaaccgaactgggtgaaca 19945359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 44303931 - 44304023
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  44303931 tttgtatctctttttaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggatcgaactaggtgaaca 44304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 5689341 - 5689438
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||||| ||||    
T  5689341 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttggtcaag-ttggaccgaactgggtcaaca 5689438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 15212856 - 15212953
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  15212856 aacccatttgtatctctttgtaagaactcattgataatggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 15212953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 43036497 - 43036590
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  43036497 catttgtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcctccagattaggtcaag-ttggaccgaactgggtcaaca 43036590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 3303764 - 3303671
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||    
T  3303764 catttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccacagtaggtcaag-ttggaccgaactgggtaaaca 3303671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 3439589 - 3439671
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3439589 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactggatgaaca 3439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 25690040 - 25690122
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25690040 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 27811348 - 27811445
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  27811348 aacccatttgtatctctttgtaagaacccattgatagtggattgaagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 27811445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 1292557 - 1292455
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||||||||| |||||||||||||||  |||||||||    
T  1292557 catttgtatctctttgtaagaactcattgatagtggatttgagaaataaatctctcc-ccagagtaggtcaag-ttggaccgaactgggcaaacatttct 1292460  T
Q  123 tggtg 127  Q
    |||||    
T  1292459 tggtg 1292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 4731728 - 4731825
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| |||||||||| ||||| ||||    
T  4731728 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcgatctctcccccagattcggtcaag-ttggaccgaattgggtcaaca 4731825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 4743296 - 4743215
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||    
T  4743296 tttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtcaag-ttggaccgaactgggtcaaca 4743215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 30143410 - 30143488
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  30143410 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagataaggtcaagtt 30143488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 40321150 - 40321247
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  40321150 aacccattagtatctctttgtaaaaactctttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 40321247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 4162571 - 4162668
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||||||| |||||||||| ||||| |||||||||    
T  4162571 catttgtatctctttgtaagaactcattgatag-ggattggagatatcaatctctccccaagagtaggtcaag-ttggaccgaattgggtaaacatttct 4162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 4733784 - 4733873
Alignment:
Q  27 tgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  4733784 tgtatctctttgtaagaattcattgatagtggattggagagatcgatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 4733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 6599042 - 6599139
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  6599042 aacccatttgtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 6599139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 6674495 - 6674592
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  6674495 aacccatttgtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 6674592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 12702732 - 12702635
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||| ||||    
T  12702732 aacccttttgtgtctctttgtaagaactcattgatattggattggagagatcaatctctcccctagattaggtcaag-ttggaccgaactgggtcaaca 12702635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 3073965 - 3073870
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||||| |||| ||||||||||| |||||||||    
T  3073965 tttgtatctctttgtaagaactcattgataatggcttggagagatcaatctctcc-ccatagtaggtcaag-ttgggccgaactgggtaaacatttct 3073870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 10015155 - 10015256
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||| | |||||||    
T  10015155 catttgtatctcttt-taggaactcattgatagtggattggagagataaatctct-ctccatagtaggtcaag-ttggaccgaactgggtaatcatttct 10015251  T
Q  123 tggtg 127  Q
    |||||    
T  10015252 tggtg 10015256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 18141890 - 18141981
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactggg 111  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||| | ||| ||||||||| ||||||| |||||||    
T  18141890 aacccatttgtatcactttgtaagaactctttgatagtggattggagagatcaatctctcccctagattaggtcaag-ttggaccaaactggg 18141981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 42575402 - 42575327
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  42575402 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 42575327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 1345469 - 1345391
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  1345469 aacccatatgtatctctttgaaagaactcattgatagtggattgaagagttcaatctctcccccagagtaggtcaagtt 1345391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 8153834 - 8153935
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||| |||||||||| ||| | || |||| |||    
T  8153834 tttgtatatctttgtaagaactcattgatagttgattggagagatcaatctcttcctcagagtaggtcaag-ttggaccgaaatggataaatattttttg 8153932  T
Q  125 gtg 127  Q
    |||    
T  8153933 gtg 8153935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 15290614 - 15290688
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtg 113  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  15290614 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtg 15290688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 15470983 - 15471057
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtg 113  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  15470983 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtg 15471057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 8965789 - 8965689
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||| ||| ||| ||||||||||||||||||||||||| || |||||||| ||||||||| ||| | ||||||||| |||||||||||||||| |||||    
T  8965789 aacccttttatatctctttgtaagaactcattgatagtgcatcggagagataaatctctcccccatattaggtcaag-ttggaccgaactgggtaaacat 8965691  T
Q  119 tt 120  Q
    ||    
T  8965690 tt 8965689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 41366712 - 41366622
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactggg 111  Q
    |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  41366712 aacctatttgtatccctttgtaagaactcatttatagtggattggagagatcaatctctcc-ctagattaggtcaag-ttggaccgaactggg 41366622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 2999820 - 2999723
Alignment:
Q  100 gaccgaactgggtgaacatttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    |||||||||| || ||||||||||| || ||  ||| ||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||||||    
T  2999820 gaccgaactgagtaaacatttcttgatgttga-tatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcacttg 2999723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 9765815 - 9765911
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |   ||||||| ||||| |||||| |  |||||||||||||||| ||||    
T  9765815 aacccatttgtatctctttgtaagaactcattgatagtggattggagagct-gctctctcccccagattaggtc-atattggaccgaactgggtcaaca 9765911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 19491797 - 19491723
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 93  Q
    ||||||||||||| ||||||||||||||| |||||||||||||  |||||||||| ||||| ||| |||||||||    
T  19491797 aacccatttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtca 19491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 18106161 - 18106087
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  18106161 tttgtaagaactcattgatagt-gtttggagagatcaatctctcc-ccagaataggtcaag-ttggaccgaactgggt 18106087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 44353867 - 44353923
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcc 79  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||    
T  44353867 catttgtatctctttgtaagaactcattgatagtggattgaaaagatcaatctctcc 44353923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 30291681 - 30291767
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctct-cctccagagtaggtcaagtttggaccgaactg 109  Q
    |||||||||  ||||||||||| || ||||||||||||||||||||||||||||| |||||||| || | |||| |||||||||||||    
T  30291681 catttgtatcactttgtaagaattctttgatagtggattggagagatcaatctctccctccagattatgccaag-ttggaccgaactg 30291767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 7597690 - 7597776
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||| ||| |||||||||   || |||||||||||    
T  7597690 tttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctcccccatagtaggtcattgttagaccgaactgg 7597776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 11712099 - 11711993
Alignment:
Q  19 aacccatttgtatttctttgtaag-aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||| ||| |||||||||  |||||||||||||||||||| ||||||||||||||||  || |||||||||   |||| || || ||||| ||||    
T  11712099 aacccttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggtcattgttggtcctaattgggtaaaca 11712000  T
Q  118 tttcttg 124  Q
    |||||||    
T  11711999 tttcttg 11711993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 29796394 - 29796317
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacattt 120  Q
    |||||||| ||| |||||||||||||||||||||||| |||  ||||||||   |||||||||||| ||| |||||||    
T  29796394 aactcatttataatggattggagagatcaatctctcccccaatgtaggtcattgttggaccgaacttggtaaacattt 29796317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 10929872 - 10929907
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagaga 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  10929872 tctttgtaagaactcattgatagtggattggagaga 10929907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 38863949 - 38864000
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggt 91  Q
    |||||||| |||||||||||||||||||||||||||| ||| || |||||||    
T  38863949 aagaactcgttgatagtggattggagagatcaatctcccctgcatagtaggt 38864000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 32902250 - 32902197
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 93  Q
    ||||| |||||||||||| ||| ||||||||||||||||| || ||||||||||    
T  32902250 aagaattcattgatagtgaatttgagagatcaatctctccccctgagtaggtca 32902197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 10240318 - 10240417
Alignment:
Q  144 actctctttatcttgtttatcttgt-ggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtggttattt 242  Q
    |||||||||||||||||||| || | |||| ||||||||||||||| | || || |||| |||| ||| ||||  ||||| |||||| |||||| |||||    
T  10240318 actctctttatcttgtttatttttttggttcgattgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtttgtggctattt 10240417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 11137213 - 11137262
Alignment:
Q  136 ttttctctactctctttatcttgtttatcttgtggttagattgtggtttt 185  Q
    ||||||||||||||||||||||||||||    ||||| ||||||||||||    
T  11137213 ttttctctactctctttatcttgtttattcattggttcgattgtggtttt 11137262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 34310810 - 34310571
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  34310810 catttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctt 34310711  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgttta-tcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttg 220  Q
    ||||| ||| ||| |||||| |||||||||||||||||||| || | |||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  34310710 tggtgttgt-tatcttttctttactctctttatcttgtttattcctttggttgaattgtggttttgctatgcacttggtttatagactaggtctatattg 34310612  T
Q  221 tttttattgcttgtggt-tatttacatttgattattggttg 260  Q
    || |||||||||||||| |||||||||||| ||||||||||    
T  34310611 ttgttattgcttgtggtctatttacatttggttattggttg 34310571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 4508804 - 4508563
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||||    
T  4508804 aacccatttgtatctctttgtaagaactcattgagagtggattggagagatcaatctcttcttcagagtaggttaagtt-ggaccgaactgggtgaacat 4508706  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||     
T  4508705 ttcttggtgttgt-tatattttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcacttggtttatagactaggtctata 4508607  T
Q  218 ttgtttttattgcttgtgg-ttatttacatttgattattggttg 260  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||    
T  4508606 ttgttgttattgcttgtggtttatttatatttggttattggttg 4508563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 8359408 - 8359174
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  8359408 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttg 8359309  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| ||| ||| |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||  |||||     
T  8359308 gtgttgt-tatcttttctctactctcattatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattgttg 8359210  T
Q  224 ttattgcttgtggttatttacatttgattattggttgcc 262  Q
    || |||||||||   |||||| ||||||| |||||||||    
T  8359209 ttgttgcttgtg---atttacttttgattgttggttgcc 8359174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 4510646 - 4510403
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||| |||||||| |||||||||||||    
T  4510646 aacccatttgtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtcaag-ttggaccgtactgggtgaacat 4510548  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| ||||||||| ||||||||||||   | |||  |||||| |||||||||||||||| ||||||||||||||||||     
T  4510547 ttcttggtgttgt-tatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctatgcacttgatttatagactaggtctata 4510449  T
Q  218 ttgtttttattgcttgtgg-ttatttacatttgattattggttgcc 262  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  4510448 ttgttgttattgcttgtggtttatttacatttggttattggttgcc 4510403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 4512488 - 4512245
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||| |||||||| |||||||||||||    
T  4512488 aacccatttgtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtcaag-ttggaccgtactgggtgaacat 4512390  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| ||||||||| ||||||||||||   | |||  |||||| |||||||||||||||| ||||||||||||||||||     
T  4512389 ttcttggtgttgt-tatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctatgcacttgatttatagactaggtctata 4512291  T
Q  218 ttgtttttattgcttgtgg-ttatttacatttgattattggttgcc 262  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  4512290 ttgttgttattgcttgtggtttatttacatttggttattggttgcc 4512245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 260
Target Start/End: Original strand, 3259069 - 3259305
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||     
T  3259069 catttgtatctctttgtaaaaacccattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttgaaccgaactgggtgaacatttcc 3259167  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgt 221  Q
    ||||| ||| ||| |||||| |||||||||||||||||||||    ||||| ||||||||||||||||||| | || ||| |||| ||| ||||  ||||    
T  3259168 tggtgttgt-tatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcccgtgttttctagattagatctagattgt 3259266  T
Q  222 ttttattgcttgtggttatttacatttgattattggttg 260  Q
    | |||||||||||||||||||||||||| ||||||||||    
T  3259267 tgttattgcttgtggttatttacatttggttattggttg 3259305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 23 - 249
Target Start/End: Original strand, 29608811 - 29609037
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  29608811 catttgtatctctttgtaagaactcattgatagtggattggagatatcaatcactcctccagagtaggtcaag-ttggaccgaactgagtgaatatttct 29608909  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtgg-ttttgctatgcacttggtttatagactaggtctattttg 220  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||| | || ||||||||||| ||||| |||||||||||||| || | ||| ||||  |||    
T  29608910 tggtgttgt-tatcttttctctactctctttatcttgtttatcctttgcttagattgtggtttttgatatgcacttggtttctatattagatctagattg 29609008  T
Q  221 tttttattgcttgtggttatttacatttg 249  Q
    || || |||||||||||||||||||||||    
T  29609009 ttgttgttgcttgtggttatttacatttg 29609037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 32358152 - 32357934
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32358152 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 32358054  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| ||||||||||| |||||||||    || ||  |||||||||||| |||||| |||| ||||| |||||||||||     
T  32358053 ttcttggtgttgt-tatcttttctttactctctttaacttgtttattccttgcttgaattgtggttttgttatgcaattggattataaactaggtctata 32357955  T
Q  218 ttgtttttattgcttgtggtt 238  Q
    || || || ||||||||||||    
T  32357954 ttattgttgttgcttgtggtt 32357934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 2390352 - 2390596
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-ca 117  Q
    ||||||||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |    
T  2390352 aacccatttgtatctctttgtaataactcatatatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtgaataa 2390450  T
Q  118 tttcttgg---tgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtct 214  Q
    | ||||||   || ||| |||||||||||||||||||||||||||||||| | | ||| ||||||||||||||||| || ||| ||| |||| ||| |||    
T  2390451 tctcttggtgttgttgtttatttttctctactctctttatcttgtttatccttttgttggattgtggttttgctatacatttgttttctagattagatct 2390550  T
Q  215 attttgtttttattgcttgtggttatttacatttgattattggttg 260  Q
    |  ||||| |||||| ||||||||||||||||||| ||||||||||    
T  2390551 agattgttgttattgattgtggttatttacatttggttattggttg 2390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 23 - 216
Target Start/End: Complemental strand, 48599428 - 48599237
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||    
T  48599428 catttgtatctctttggaagagctcattgatagtggattggagagatcaatctctcctccagagcagatcaag-ttggaccgaactgggtgaacatttct 48599330  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    || || ||| ||| |||||| |||||||||||||||||||||    ||||| |||||| |||||||| ||||||| | |||||||||||||||||    
T  48599329 tgatgttgt-tatcttttctttactctctttatcttgtttattccttggttggattgtagttttgctgtgcactt-gattatagactaggtctat 48599237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 22270043 - 22270150
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22270043 aacccatttgtatctctttgtaagaactgattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 22270141  T
Q  119 ttcttggtg 127  Q
     ||||||||    
T  22270142 ctcttggtg 22270150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 6360050 - 6359829
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| | ||| | ||||||||| ||||| |||||||||| ||| |    
T  6360050 aacccatttgtatctctttgtaagaactcattgatagttgattggagagatcaatctcttccccatattaggtcaag-ttggatcgaactgggtcaacaa 6359952  T
Q  118 tttcttggtgctgtctat-ttttc-tctactctctttatcttgttta-tcttgtggttagattgtggttttgctatgcacttggtttatagactaggtct 214  Q
    |||||||||| ||| ||| ||||| | | || ||||||||||||||| || |   ||| ||||||||||||||||||||||||||||||||||||||| |    
T  6359951 tttcttggtgttgt-tatcttttcatttgctttctttatcttgtttattccttaagttggattgtggttttgctatgcacttggtttatagactaggtat 6359853  T
Q  215 attttgtttttattgcttgtggtt 238  Q
    || || || || ||||||||||||    
T  6359852 atattattgttgttgcttgtggtt 6359829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 35853984 - 35854082
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35853984 aacccttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 35854082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 23555124 - 23555208
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23555124 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 23555208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 29991123 - 29991221
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29991123 aacccttttgtatctctttctaataactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 29991221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 235
Target Start/End: Complemental strand, 2361066 - 2360859
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||| ||| |||||||||||| || |    |    
T  2361066 catttgtatctctttgtaagaactcattgatagtggatttgagatatcaatctctcccccagattaggtcaag-ttgaaccgaactgggtcaataacctt 2360968  T
Q  123 tggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtt 222  Q
    ||||| ||||   |||||| || ||||||||||||||||||    |||||  |||||||||||| |||||||||||||| |||||||||||||| ||| |    
T  2360967 tggtg-tgtc---ttttctttattctctttatcttgtttattccttggttgaattgtggttttgatatgcacttggtttctagactaggtctatattgat 2360872  T
Q  223 tttattgcttgtg 235  Q
     || |||||||||    
T  2360871 gttgttgcttgtg 2360859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 25615923 - 25616021
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25615923 aacccatttgtatcattttgtaagaactcattgatagtggattagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggcgaaca 25616021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 39731455 - 39731537
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39731455 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 39731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 19502254 - 19502346
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  19502254 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaagtcaagtttggaacgaagtgggtgaaca 19502346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 22328483 - 22328265
Alignment:
Q  25 tttgtatttctttgtaag-aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| |||||| ||| || ||||| |||||||||| ||||||||||||||||| | |||||||||||   |||||||||||||||| || |||| ||    
T  22328483 tttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccctagagtaggtcattgttggaccgaactgggtaaatatttttt 22328384  T
Q  124 ggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtt 222  Q
    |||| ||| ||| ||||||||||||||||||||||||||||  | | ||| ||||||||||||| |||||||||||||| | || ||| ||||  |||||    
T  22328383 ggtgttgt-tatcttttctctactctctttatcttgtttattcttttgttcgattgtggttttgttatgcacttggtttctcgattagatctagattgtt 22328285  T
Q  223 tttattgcttgtggttattt 242  Q
    ||| ||  || |||||||||    
T  22328284 tttgttatttctggttattt 22328265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 6432041 - 6432134
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtg 113  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  6432041 aacccatttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctccttcagagtaggtcaag-ttggaccgaactgggtg 6432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 25767052 - 25766960
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25767052 tttgtatctcttttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttagaccgaactgggtgaaca 25766960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 14069931 - 14069834
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||| ||||    
T  14069931 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtcaag-ttggaccgaactgggtcaaca 14069834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 14379959 - 14379862
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||| ||||    
T  14379959 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattaggtcaag-ttggaccgaactgggtcaaca 14379862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 27347887 - 27347984
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  27347887 aacccatttgtatctctttgtaagaactcattgatagtggattgcagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 27347984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 41649109 - 41648973
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||     
T  41649109 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaag-ttggaccgaactgggtcaacaa 41649011  T
Q  119 ttcttggtgctgtctatttttctctactctctttatctt 157  Q
    |  |||||| ||| | ||| ||||| |||||||||||||    
T  41649010 tctttggtg-tgtttgtttctctcttctctctttatctt 41648973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 31518976 - 31519080
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctc-ctccagagtaggtcaagtttggaccgaactgggtgaacatttc 121  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| | ||||||||    
T  31518976 catttgtatctctttgtaagaactcattgacagtggattggagagatcaatctctctccccagagtaggtcaag-ttggaccgaactggataaacatttc 31519074  T
Q  122 ttggtg 127  Q
    ||||||    
T  31519075 ttggtg 31519080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 30024830 - 30024740
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  30024830 aacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatcactcccccagagtaggtcaag-ttggaccgaactgg 30024740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 31105491 - 31105385
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||| ||||| |||||||||||||||| |||||    
T  31105491 aacccatttgtatctttttgtaagaactcattgatggtggattggagagataaatctctccccaagagtagatcaag-ttggaccgaactgggtaaacat 31105393  T
Q  119 ttcttggt 126  Q
    ||||||||    
T  31105392 ttcttggt 31105385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 41317529 - 41317435
Alignment:
Q  22 ccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  41317529 ccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 41317435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 31733067 - 31732970
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  31733067 aacccatttgtatctctttgtaagaactcattgatactggattggagagatcaatctctcccccaaattaggtcaag-ttggaccgaactgggtcaaca 31732970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 43504236 - 43504154
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  43504236 tttgtaagaactcattgatagtgaattggagagttcaatctctcctccatagtaggtcaagtttggatcgaactgggtgaaca 43504154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 8153416 - 8153546
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| ||||||||| |||| |  |    
T  8153416 catttgtatctctttgtaataactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggactgaactgggtcaacaatctt 8153514  T
Q  123 tggtgctgtctatttttctctactctctttatctt 157  Q
    ||||| ||| ||  ||||||| |||||||||||||    
T  8153515 tggtg-tgttta--tttctcttctctctttatctt 8153546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 1560749 - 1560671
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  1560749 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 1560671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 18126714 - 18126811
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||| |||||| |||||| ||||    
T  18126714 aacccatttgtatctctttgtaagaactcattgatagtggattggaggaatcaatctctcccccagactaggtcaagttt-gaccgacctgggtcaaca 18126811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 18388838 - 18388760
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388838 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18388760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 18392274 - 18392196
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18392274 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18392196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 24789927 - 24790009
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  24789927 tttgtaaaaactctttgatagtggattggagagtactatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 24790009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 36146506 - 36146409
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||| |||||||||||| ||| ||||    
T  36146506 aacccatttgtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcccccatattaggtcaag-ttggaccgaactaggtcaaca 36146409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 43864314 - 43864411
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||||| ||||    
T  43864314 aacccatttgtatctctttgtaaaaactaattgatagtggattggagagatcaatctctctcccagattaggtcaag-ttggaccgaactgggtcaaca 43864411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 48489501 - 48489598
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||| || |||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  48489501 aacccatttgtatctctttgcaataactcattcatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtaaaca 48489598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 48491649 - 48491727
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  48491649 aacccatttgtatctctttgaaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagtt 48491727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 24525596 - 24525508
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||| |||||||||    
T  24525596 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtcaag-ttggacggaactgggt 24525508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 48408898 - 48408983
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttcttggtg 127  Q
    ||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  48408898 aactcattgatagtggattggagagtttaatctctcctccagagtatgtcaagtttagaccgaactgggtgaacaatttcttggtg 48408983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 1113727 - 1113807
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 99  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||    
T  1113727 aacccatttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattaggtcaagtttg 1113807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 496082 - 496003
Alignment:
Q  18 caacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  496082 caacccatttgtatctctttataagaactcattgatagtggattggagagatcaatctctcccctatagtaggtcaagtt 496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 20343982 - 20344064
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  20343982 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 20344064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 47676234 - 47676144
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  47676234 aacccatttgtatctctttgtaagaactcaatgatagtggaatggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgg 47676144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 6592418 - 6592340
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6592418 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6592340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 6594636 - 6594558
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6594636 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6594558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 23565153 - 23565053
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| |||||| ||||| ||| | |||||||||    
T  23565153 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctctcctagagtaggtcaag-ttggactgaact-ggtaatcatttcttg 23565056  T
Q  125 gtg 127  Q
    |||    
T  23565055 gtg 23565053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 32060400 - 32060322
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32060400 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaacttggtgaaca 32060322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 47674041 - 47673953
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactg 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || |||||| |||||||||||||    
T  47674041 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcc-ccatattaagtcaag-ttggaccgaactg 47673953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 4586231 - 4586323
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || |||||  ||||||||||||||||    
T  4586231 aacccatttttatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattatgtcaa-cttggaccgaactgggt 4586323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 26417386 - 26417493
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||  ||||||| |||||||| ||| |    
T  26417386 aacccatttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcc-ccaggttaggtcaa-attggaccaaactgggtcaacaa 26417483  T
Q  118 tttcttggtg 127  Q
    ||||||||||    
T  26417484 tttcttggtg 26417493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 4253605 - 4253519
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtg 127  Q
    ||||||||||||||| |||||| |||||||||||||||||  ||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  4253605 aagaactcattgataatggattagagagatcaatctctcccacagagtaggtcaa-tttggaccgaactaggtaaacatttcttggtg 4253519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 2759291 - 2759198
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||| |||||||||||| ||| ||||    
T  2759291 catttatatctctttgtaagaactcattgatagtggattggagatatcaatctcttccccagattaggtcaag-ttggaccgaacttggtcaaca 2759198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 4178844 - 4178941
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||| | || |||||||||||||||||| |||||||||||| ||| |||| ||||||||    
T  4178844 aacccttttgtatctctttg-aagaactcattgatagtggattgaacagttcaatctctcctccagagcaggtcaagtttgaaccaaactaggtgaaca 4178941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 18396409 - 18396488
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt 119  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||||    
T  18396409 aagaattcattgatagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaacatt 18396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 30814530 - 30814603
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  30814530 aactcattgatagtggattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 30814603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 38671316 - 38671223
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||| ||||| ||| ||| | ||||||||| |||||||||||||||| ||||    
T  38671316 catttgtatcactttgtaagaactcattgatagtggattgaagagataaatctatcccccaaaataggtcaag-ttggaccgaactgggtcaaca 38671223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 23344045 - 23344176
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||| || |||| ||||||| |||||||||||||| | ||||||||| || ||||||||  ||||||||||||||| |||||||||||  ||| |||||    
T  23344045 aaccctttagtatatctttgtgagaactcattgataatagattggagaaattaatctctc--ccagagtaggtcaag-ttggaccgaacaaggtaaacat 23344141  T
Q  119 ttcttggtgctgtctatttttctctactctctttatct 156  Q
    |||||||   ||| ||| ||||||| ||||||||||||    
T  23344142 ttcttgg---tgtgtatgtttctcttctctctttatct 23344176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 5513765 - 5513661
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||| ||| ||||||||| ||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||| ||||    
T  5513765 aacccttttatatctctttgtaaagaactcattgacactgaattggaga-atcaatctcacctccagagtaggtcaa-tttggactgaactgggtaaaca 5513668  T
Q  118 tttcttg 124  Q
    |||||||    
T  5513667 tttcttg 5513661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 36574614 - 36574510
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||| ||| ||||||||| ||||||||||||||||| |||||||||||||||  ||| | |||||||||||| |||||||| |||||||| ||||    
T  36574614 aacccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatccatcc-ctagagtaggtcaa-tttggaccaaactgggtaaaca 36574517  T
Q  118 tttcttg 124  Q
    |||||||    
T  36574516 tttcttg 36574510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 12097931 - 12097868
Alignment:
Q  53 tagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||| ||| ||||    
T  12097931 tagtggattggagagatgaatctctcccccagattaggtcaag-ttggaccgaactaggtcaaca 12097868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 5116680 - 5116735
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 79  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||    
T  5116680 tttgtatctctttgtaaagaactcattgatagtgaattggagagataaatctctcc 5116735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 3904693 - 3904624
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    |||||||||||||||||| ||  |||||||||||||||||  ||||||||||||   ||||||||||||||    
T  3904693 aagaactcattgatagtg-atcagagagatcaatctctccctcagagtaggtcattgttggaccgaactgg 3904624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 26639419 - 26639504
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgc 128  Q
    ||||| |||||| |||||| ||||||||||||||||||||| |||| ||||   ||| |||||||||| | || | ||||||||||    
T  26639419 aactctttgataatggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaactggctaaaaaattcttggtgc 26639504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 1360155 - 1360048
Alignment:
Q  135 tttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtct-attttgtttttattgcttg 233  Q
    |||||||||| |||||||||||||||| |  | | ||| ||||||||||||||| | ||||| |||| |||| ||| ||| |  ||||| || |||||||    
T  1360155 tttttctctattctctttatcttgtttcttcttttgttcgattgtggttttgctttacacttagtttttagattagatctaaaattgttgttgttgcttg 1360056  T
Q  234 tggttatt 241  Q
    ||||||||    
T  1360055 tggttatt 1360048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 31518869 - 31518905
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtgga 59  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  31518869 catttgtatctctttgtaagaactcattgacagtgga 31518905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 6e-80; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 25 - 262
Target Start/End: Original strand, 26800664 - 26800900
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||    
T  26800664 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaacatttcttg 26800762  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| ||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||  |||||     
T  26800763 gtgttgt-tatcttttctctactctttttatcttgtttatcttttggttagattgtggttttgctatgcacttgttttctagactagatctagattgttg 26800861  T
Q  224 ttattgcttgtggttatttacatttgattattggttgcc 262  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  26800862 ttattgcttgtggtaatttacatttggttattggttgcc 26800900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 17758093 - 17758337
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||||    
T  17758093 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtagttcaagtttggaccgaactaggtgaacat 17758192  T
Q  119 ttcttggtgctgtctatttttc--tctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    ||||||||| ||| ||| ||||  | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||| ||| |||| ||| ||||     
T  17758193 ttcttggtgttgt-tatctttccttttacgctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctag 17758291  T
Q  217 tttgtttttattgcttgtggttatttacatttgattattggttgcc 262  Q
     ||||| |||||||||| ||||||||||||||| ||||||||||||    
T  17758292 attgttgttattgcttgcggttatttacatttggttattggttgcc 17758337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 21589001 - 21589220
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21589001 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 21589099  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||||||||| ||| ||| |||||| |||| || |||||||||||||    | ||| |||||||||||||||||||||||||||||||||||||||||||     
T  21589100 ttcttggtgttgt-tatcttttctttactttccttatcttgtttattccttagttggattgtggttttgctatgcacttggtttatagactaggtctata 21589198  T
Q  218 ttgtttttattgcttgtggtta 239  Q
    ||||| ||||||||||||||||    
T  21589199 ttgttgttattgcttgtggtta 21589220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 2973037 - 2972791
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||    
T  2973037 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctcaagagtaggtcaag-ttcgaccgaactaggtgaacat 2972939  T
Q  119 ttcttggtgctgtctatttttctcta----ctctctttatcttgtttatcttgtggttagattgtgg-ttttgctatgcacttggtttatagactaggtc 213  Q
    ||||||||| ||| ||||||| | ||    |||||| ||||||||||||| | |||||||||||||| |||| |||||||||| ||||||||||||||||    
T  2972938 ttcttggtgttgt-tatttttttttactctctctctatatcttgtttatcatttggttagattgtggttttttctatgcacttagtttatagactaggtc 2972840  T
Q  214 tattttgtttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    ||| ||||| || ||| ||||||||||||||||||||||||||||||||    
T  2972839 tatattgttgttgttgtttgtggttatttacatttgattattggttgcc 2972791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 3808800 - 3808559
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt-tctt 123  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| | ||||    
T  3808800 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcatgattggaccgaactaggtgaacaatctctt 3808701  T
Q  124 gg---tgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttg 220  Q
    ||   || |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| ||| ||| |||| ||| ||||  |||    
T  3808700 ggggttgttgtctatttttctctactctctttatcttgtttatcctttggttagattatggttttgctatgcatttgttttctagattagatctagattg 3808601  T
Q  221 tttttattgcttgtggttatttacatttgattattggttgcc 262  Q
    ||  |||||||| |||||||||||||||||||||||||||||    
T  3808600 ttgctattgcttttggttatttacatttgattattggttgcc 3808559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 22 - 259
Target Start/End: Complemental strand, 26830218 - 26829979
Alignment:
Q  22 ccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttc 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  26830218 ccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccaaagtaggtcaagttt-gactgaactgggtgaacatttc 26830120  T
Q  122 ttggtgctgtctat-ttttctcta--ctctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    |||||| ||| ||| |||||| ||  |||||||||||||||||||  ||||   || ||||||||||||||||||||||||||||||||||||||| |||    
T  26830119 ttggtgttgt-tatcttttctttactctctctttatcttgtttattccttg-ctttggattgtggttttgctatgcacttggtttatagactaggtttat 26830022  T
Q  217 tttgtttttattgcttgtggttatttacatttgattattggtt 259  Q
     ||||| |||||||||||||||||||||||||| |||||||||    
T  26830021 attgttgttattgcttgtggttatttacatttggttattggtt 26829979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 23 - 260
Target Start/End: Original strand, 5043701 - 5043939
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  5043701 catttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcctccatagtaggtcattgttggaccgaactgggtgaacatttct 5043800  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtc--tatttt 219  Q
    ||||| ||| ||| |||||| ||||||||||||||||||||| |  ||||| ||||||||||||||||||||||| | ||||||| ||||||  ||| ||    
T  5043801 tggtgttgt-tatcttttctttactctctttatcttgtttatttcttggttggattgtggttttgctatgcactt-gattatagaataggtctatatatt 5043898  T
Q  220 gtttttattgcttgtggttatttacatttgattattggttg 260  Q
    ||| || ||||||| ||||||||||||||| ||||||||||    
T  5043899 gttgttgttgcttgaggttatttacatttggttattggttg 5043939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 23 - 260
Target Start/End: Original strand, 17763064 - 17763302
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  17763064 catttgtatctttttggaagaactcattgatagtggattggagtgatcaatctctcctccagagtagatcaagtttggaccgaactaggtgaacatttct 17763163  T
Q  123 tggtgctgtctat-ttttc-tctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttg 220  Q
    ||||| ||| ||| ||||| | |||||||||||||||||| ||| | |||||||||||| ||||||||||||||||| | | |||| ||| ||||  |||    
T  17763164 tggtgttgt-tatcttttcttttactctctttatcttgttcatcctttggttagattgtagttttgctatgcacttgttatctagattagatctagattg 17763262  T
Q  221 tttttattgcttgtggttatttacatttgattattggttg 260  Q
    || |||||| ||||| ||||||||||||| ||||||||||    
T  17763263 ttgttattgtttgtgattatttacatttggttattggttg 17763302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 22424917 - 22424682
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||   |||||||| |||||||||||||||||||    
T  22424917 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggtgaacatttcttg 22424819  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtgg--ttttgctatgcacttggtttatagactaggtctattttgt 221  Q
    ||| ||| ||| ||||||||||||||||||||||||||||| |  |||||||||||||  |||| | ||||||||||||| || | ||| ||||  ||||    
T  22424818 gtgttgt-tatcttttctctactctctttatcttgtttatccttaggttagattgtggtttttttcaatgcacttggtttctatattagatctagattgt 22424720  T
Q  222 ttttattgcttgtggttatttacatttgattattggtt 259  Q
    | || ||| ||||||||||||||||||| |||||||||    
T  22424719 tgttgttgtttgtggttatttacatttggttattggtt 22424682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 21593734 - 21593841
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21593734 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 21593832  T
Q  119 ttcttggtg 127  Q
    |||||||||    
T  21593833 ttcttggtg 21593841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 603186 - 603005
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-a 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| | ||| ||||||||| |||||||||||||||| ||| |    
T  603186 aacccatttgtatctctttgtaagaactcgttgatagtggattggagaaatcaatctctccccaagattaggtcaag-ttggaccgaactgggtcaacaa 603088  T
Q  118 tttct---tggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    | |||   || || |||||||||||||||||||||||||||||||||||    ||||| |||||||||||| |||||||||||    
T  603087 tctcttgatgttgttgtctatttttctctactctctttatcttgtttatgccttggttggattgtggttttactatgcacttg 603005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 28137506 - 28137400
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||    
T  28137506 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtcaag-ttggaccgaattgtgtgaacat 28137408  T
Q  119 ttcttggt 126  Q
    ||||||||    
T  28137407 ttcttggt 28137400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 5406298 - 5406200
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5406298 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaaca 5406200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 5410623 - 5410525
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5410623 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaaca 5410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 31404773 - 31404675
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31404773 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggccaagtttggaccgaactgggtgaaca 31404675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 2171624 - 2171532
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2171624 tttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 2171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 5409167 - 5409076
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5409167 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 5409076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 5413492 - 5413401
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5413492 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 5413401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 30834634 - 30834538
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 115  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30834634 aacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 30834538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 6097533 - 6097451
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6097533 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6097451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 16452413 - 16452329
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16452413 tctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 412188 - 412270
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  412188 tttgtaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 412270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 3072841 - 3072759
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3072841 tttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 3072759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 9183129 - 9183032
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||    
T  9183129 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattatgtcaag-ttggaccgaactgggtcaaca 9183032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 33160444 - 33160352
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  33160444 tttgtatctctttgtaagaactcattgatggtggattggagagatcaatctctcctccagagtatttcaagtttggaccaaactgggtgaaca 33160352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 16569107 - 16569228
Alignment:
Q  34 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgctgtct 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |  |||||| ||| |    
T  16569107 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattaggtcaag-ttggaccgaactgggtcaacaatctttggtg-tgttt 16569204  T
Q  134 atttttctctactctctttatctt 157  Q
     ||| ||||| |||||||||||||    
T  16569205 gtttctctcttctctctttatctt 16569228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 33211279 - 33211186
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  33211279 catttgtatctctttgtaagaactcatttataatggattggagagatcaatctctcccccagagtaggtcaag-ttggaccgaactgggtcaaca 33211186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 16578601 - 16578518
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16578601 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16578518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 16616779 - 16616862
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16616779 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16616862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 16653197 - 16653280
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16653197 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16653280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 27647946 - 27648041
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttcttggtgct 129  Q
    ||||||||||||| |||||||||||||||||||  ||| |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||    
T  27647946 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtagatcaagtttggaccgaactgggtgaacaatctcttggtgct 27648041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 25421396 - 25421474
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25421396 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25421474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 26954376 - 26954287
Alignment:
Q  27 tgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| ||| ||||    
T  26954376 tgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtcaag-ttggaccgaactaggtcaaca 26954287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 16554954 - 16555037
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  16554954 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaaca 16555037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 16631510 - 16631593
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  16631510 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaaca 16631593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 6027337 - 6027415
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6027337 aagaactcatttgatagtggattggagagtacaatctctcctccagagtatgtcaagtttggaccgaactgggtgaaca 6027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 34167180 - 34167248
Alignment:
Q  49 ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34167180 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 34167248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 13154005 - 13154080
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  13154005 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 13154080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 33342183 - 33342108
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  33342183 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 33342108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 34164948 - 34165023
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  34164948 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 34165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 3039001 - 3038926
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaa 94  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||| ||||| ||||||||    
T  3039001 aacccatttgtatctctttgtaagaactctttaatagtggattggagagattaatctctcccccagattaggtcaa 3038926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 215
Target Start/End: Original strand, 9572681 - 9572858
Alignment:
Q  39 taagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt-gaacatttcttggtgctgtctat-t 136  Q
    ||||||| |||||||||||||||| |||||||||||||| ||  |||||||||||   ||| | ||||||||||  || |||||||| || ||| ||| |    
T  9572681 taagaacccattgatagtggattgcagagatcaatctctactttagagtaggtcatcattgaaacgaactgggtaaaatatttcttgatgttgt-tatct 9572779  T
Q  137 tttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtcta 215  Q
    |||||||  | |||||||||| | |||  | || || ||||||||| || ||||||||||||||| |||| ||| ||||    
T  9572780 tttctctcgtgtctttatcttatctattctttgattcgattgtggtatttctatgcacttggtttctagattagatcta 9572858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 4045518 - 4045566
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggt 91  Q
    ||||||||||||||||||||||||||||||| ||| | ||| |||||||    
T  4045518 aactcattgatagtggattggagagatcaatttctaccccaaagtaggt 4045566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 25073638 - 25073826
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||| ||||| |||||||||||||||||||| |||| ||||||||||| | || | ||||| |   || |||  |||| ||| ||||    
T  25073638 aacccttttgtatctctatgtaaagaactcattgatagtggattagagaaatcaatctctcattcaaattaggttattgttagactaaactaggtaaaca 25073737  T
Q  118 tttcttggtgc--tgtctatt----tttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt 200  Q
    ||||||||||   ||| | ||    ||||||| |||||||||||||||||||  | ||||| |||  ||||||||| || |||||||||    
T  25073738 tttcttggtgtgttgtttgttctcttttctctgctctctttatcttgtttattctttggtttgatattggttttgcaatacacttggtt 25073826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 2908550 - 2908586
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctc 76  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  2908550 aagaactcattgatagtggattgaagaaatcaatctc 2908586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 19643894 - 19643938
Alignment:
Q  73 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  19643894 tctctccttcagagtaggtcaaatttggaccgaacttggtaaaca 19643938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 23 - 261
Target Start/End: Complemental strand, 18097 - 17859
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  18097 catttgtatctctttgtaa-aactcattgatagtggattggagagatcaatctctcctccagggtaggtcaagtttggatcgaactgggtgaacatttct 17999  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgttta-tcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttg 220  Q
    ||||| ||| ||| |||||| |||||||||||||||||||| || | |||||||||||||||||||||||||| ||| ||| |||| ||| ||||  |||    
T  17998 tggtgttgt-tatcttttctttactctctttatcttgtttattcctttggttagattgtggttttgctatgcatttgttttctagattagatctagattg 17900  T
Q  221 tttttattgcttgtggttatttacatttgattattggttgc 261  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  17899 ttgttattgcttgtggttatttacatttgattattggttgc 17859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 213535 - 213780
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  213535 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacat 213634  T
Q  119 ttcttggtgctgtctat-ttttctcta--ctctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtc 213  Q
    ||||||||| ||| ||| ||| || ||  |||||||||||||||||||  ||||   || ||||||||||||||||||||||| ||| ||||||||||||    
T  213635 ttcttggtgttgt-tatctttcctttactctctctttatcttgtttattccttg-cttttgattgtggttttgctatgcacttagttaatagactaggtc 213732  T
Q  214 tattttgtttttattgcttgtggttatttacatttgattattggttgc 261  Q
    ||| ||||| ||||||||||||||| |||||||||| |||||| ||||    
T  213733 tatattgttgttattgcttgtggttttttacatttggttattgattgc 213780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 27637704 - 27637495
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||| ||||||||    
T  27637704 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctgcagagtaggtcattgttggaccgaactgggtgaatatttcttg 27637606  T
Q  125 gtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgttt 223  Q
    ||| ||| ||| |||||| |||||||||||||||||||||    | ||| ||||||||||||||||||||||||||||||||||||||||||| |||||     
T  27637605 gtgttgt-tatcttttctttactctctttatcttgtttattccttagttggattgtggttttgctatgcacttggtttatagactaggtctatattgttg 27637507  T
Q  224 ttattgcttgtg 235  Q
    || |||||||||    
T  27637506 ttgttgcttgtg 27637495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 5058117 - 5058336
Alignment:
Q  21 cccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacattt 120  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  5058117 cccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaag-ttggaccgaactgggtgaacattt 5058215  T
Q  121 cttggtgctgtctat-ttttctctactctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtc--ta 215  Q
    ||||||| ||| ||| |||||| |||||||||||||||||||||  ||||   || |||| ||||||| |||||||||| | ||||||||||||||  ||    
T  5058216 cttggtgttgt-tatcttttctttactctctttatcttgtttattccttg-ctttggattatggttttactatgcactt-gattatagactaggtctata 5058312  T
Q  216 ttttgtttttattgcttgtggtta 239  Q
    | ||||| || |||||||||||||    
T  5058313 tattgttgttgttgcttgtggtta 5058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 40147335 - 40147508
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  40147335 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacattttt 40147433  T
Q  123 tggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttg 197  Q
    | ||| | | ||| |||||| |||||| ||||||||||||||| | |||||  |||||||||||| ||||||||||    
T  40147434 ttgtg-tttttatcttttctttactctatttatcttgtttatcctttggttgaattgtggttttgttatgcacttg 40147508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 27015594 - 27015783
Alignment:
Q  20 acccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatt 119  Q
    |||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  27015594 acccatttgtatctctttgtaagaactcattgatagtggattgtacagatcaatctctcctccaaaataggtcaag-ttggaccgaactgggtgaacatt 27015692  T
Q  120 tcttggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggt 212  Q
    | |||||| |||   ||||||| |||||||||||||||||||||  | |||||  |||||||||||| ||||||||| | |||||||||||||    
T  27015693 ttttggtg-tgttattttttctttactctctttatcttgtttatgctttggttgaattgtggttttgatatgcactt-gattatagactaggt 27015783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 28278386 - 28278493
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  28278386 aacccatttgtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacaa 28278484  T
Q  119 ttcttggtg 127  Q
    |||||||||    
T  28278485 ttcttggtg 28278493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 37439217 - 37439309
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37439217 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 37439309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 13239827 - 13239929
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||    
T  13239827 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatttttg 13239926  T
Q  125 gtg 127  Q
    |||    
T  13239927 gtg 13239929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 25412830 - 25412928
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25412830 aacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggactgaactgggtgaaca 25412928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 16452150 - 16452257
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  16452150 aacccatttgtatctctttgtaagaactcattcatagtggattggagagataaatctctcccccagagtaggtcaag-ttggaccgaactgggtaaacat 16452248  T
Q  119 ttcttggtg 127  Q
    |||||||||    
T  16452249 ttcttggtg 16452257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 9789306 - 9789224
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9789306 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 9789224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 16409561 - 16409643
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16409561 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 26170848 - 26170930
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26170848 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 26170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 26177968 - 26178050
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26177968 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 26178050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 18441730 - 18441648
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18441730 tttgtaagaactcattgatagtggattggagagttcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaaca 18441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 13343137 - 13343228
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13343137 tttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcatgtttggaccgaactgggtgaaca 13343228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 16641029 - 16640814
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||    
T  16641029 tttgtatctctttgtaagaact---tgatagtggattggagagatcaatctctcctccagagtaggtcaag-tagggccgaactgggtaaacatttcttg 16640934  T
Q  125 gtgctgtctat-ttttctctactctc--tttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgt 221  Q
    ||| ||| ||| |||||| | |||||  ||||||||| ||||  | | |||| |||||||||||| |||||| ||| ||| |||| ||  ||||  || |    
T  16640933 gtgttgt-tatcttttctttgctctctatttatcttgcttattctttagttaaattgtggttttgttatgcatttgatttctagattaaatctagatttt 16640835  T
Q  222 ttttattgcttgtggttattt 242  Q
    | || ||||||||||||||||    
T  16640834 tgttgttgcttgtggttattt 16640814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 29751242 - 29751160
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29751242 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 29751160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 30182658 - 30182756
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||| ||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  30182658 aacccttttctatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtatgtcaagtttggaccgaactggatgaaca 30182756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 32636894 - 32636991
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  32636894 aacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 32636991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 42428528 - 42428431
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  42428528 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 42428431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 13488273 - 13488365
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||    
T  13488273 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccgagattaggtcaag-ttggaccgaactgggt 13488365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 36074134 - 36074043
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  36074134 tttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggaccgaactggatgaaca 36074043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 10593343 - 10593426
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10593343 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 10593426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 22536372 - 22536277
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttcttggtgct 129  Q
    ||||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  22536372 tttgtaagaactctttgatagtggattggggagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgct 22536277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 533839 - 533936
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||| |||||||||||||||| ||||    
T  533839 aacccatttgtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaaca 533936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 29720450 - 29720532
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  29720450 tttgtaagaactctttgatagtggattggagagtacaatctctcctctagagtaggtcaagtttggaccgaactgggtgaaca 29720532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 29722610 - 29722692
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29722610 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaaatttggaccgaactgggtgaaca 29722692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 28750753 - 28750661
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||    
T  28750753 aacccatttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaattgggt 28750661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 538095 - 538185
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  538095 aacccatttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgg 538185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 31183044 - 31183177
Alignment:
Q  22 ccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttc 121  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||| ||| | ||||||||| |||||||||||||||| ||||||      
T  31183044 ccatttgtatccctttgtaagaactcattgatactggattggagagatctatctctcccccatattaggtcaag-ttggaccgaactgggtcaacattct 31183142  T
Q  122 ttggtgctgtctatttttctctactctctttatctt 157  Q
    |||||| ||| | ||| ||||| |||||||||||||    
T  31183143 ttggtg-tgtttgtttctctcttctctctttatctt 31183177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 42426334 - 42426255
Alignment:
Q  18 caacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  42426334 caacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccctgattaggtcaagtt 42426255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 25078211 - 25078289
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25078211 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25078289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 25136180 - 25136258
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25136180 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25136258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 30683022 - 30682930
Alignment:
Q  19 aacccatttgtatttctttgtaagaa--ctcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  30683022 aacccttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgg 30682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 33831750 - 33831847
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||| |||||| ||||||||| ||||    
T  33831750 aacccatttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccatattaggtcaag-ttggactgaactgggtcaaca 33831847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 40380181 - 40380259
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40380181 aagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40380259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 40382392 - 40382470
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40382392 aagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40382470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 316838 - 317014
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| ||||||||| ||||||||||||| ||||| |||| ||||||||||||| | |||||||||||   |||||||||||| ||| |||| |||||    
T  316838 tttgtatctctttgtaaagaactcattgataatggatcggagggatcaatctctcccctagagtaggtcattgttggaccgaacttggtaaacaattctt 316937  T
Q  124 ggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt 200  Q
     ||| |||    ||||| ||||||||||||| ||||||||  | |||||  |||||||||||||| | |||||||||    
T  316938 tgtgttgttctcttttccctactctctttattttgtttattctttggttcaattgtggttttgctttacacttggtt 317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 3075756 - 3075649
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| | |||||||||| || ||||||||| |||||||||||||||||||||  || ||||||||||| ||||||| || |||||||||||    
T  3075756 aacccatttgtatctttttgtaagaattcgttgatagtgaattggagagatcaatctctccctcatagtaggtcaag-ttggaccaaattgggtgaacat 3075658  T
Q  119 ttcttggtg 127  Q
    |||||||||    
T  3075657 ttcttggtg 3075649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 8566044 - 8565947
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||| ||| ||||    
T  8566044 aacccatttgtatccctctgtaagaactcattgatagtggattggagagatcaatctctcacccagattaggtcaag-ttggaccgaactaggtcaaca 8565947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 40751195 - 40751284
Alignment:
Q  168 tggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtggttatttacatttgattattggttg 260  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||   |||||||||| ||||||||||    
T  40751195 tggttaaattgtggttttgctatgcacttggtttatagattaggtctatattgttgttattgcttgtgg---tttacatttggttattggttg 40751284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 42926965 - 42927068
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||| || ||||||||   || ||||||||||| |||||||||||||||| |||||||||    
T  42926965 catttgtatctctttgtaagaactcattgacagtggattgaagaaataaatctctctctcatagtaggtcaag-ttggaccgaactgggtaaacatttct 42927063  T
Q  123 tggtg 127  Q
    |||||    
T  42927064 tggtg 42927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 16544499 - 16544574
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  16544499 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 16544574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 16546721 - 16546796
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  16546721 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtga 16546796  T

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Target: chr5; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 9049434 - 9049333
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||| ||| |||||||||| ||| | ||||||| |||    
T  9049434 tttgtatctctttgtaagaactcattgacagtggattggagagatcaatatctcccccaaagtaggtgaag-ttggaccgaaatggataaacattttttg 9049336  T
Q  125 gtg 127  Q
    |||    
T  9049335 gtg 9049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 39468647 - 39468550
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||| ||  |||||| ||||||||| ||||    
T  39468647 aacccatttgtatctctttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggttaa-attggactgaactgggtcaaca 39468550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 40763200 - 40763289
Alignment:
Q  168 tggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtggttatttacatttgattattggttg 260  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||   |||||||||||||||||||||    
T  40763200 tggttaaattatggttttgctatgcacttggtttatagattaggtctatattgttgttattgcttatgg---tttacatttgattattggttg 40763289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 200
Target Start/End: Original strand, 4160702 - 4160850
Alignment:
Q  52 atagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgctgtctat-ttttctctactctct 150  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||| || |||| || ||| ||| ||| |||||| |  ||||     
T  4160702 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggtaaatatttattagtgttgt-tatcttttctatgttctca 4160800  T
Q  151 ttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt 200  Q
    |||||||||||||  | ||||| |||| |||||||||| | |||||||||    
T  4160801 ttatcttgtttattctttggttcgattatggttttgctttacacttggtt 4160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 19806454 - 19806530
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  19806454 aagaactccttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 19806530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 13695789 - 13695681
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||| ||||||||| |||||||||| ||||||| | ||||||||||| ||||||||||  ||||||| |||| ||| ||||    
T  13695789 aacccttttgtatctctttgtaaagaactcattaatagtggattagagagattattctctcctccatagtaggtcaa-cttggaccaaactaggtaaaca 13695691  T
Q  118 tttcttggtg 127  Q
    ||||||||||    
T  13695690 tttcttggtg 13695681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 38747075 - 38747167
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||||||||| |||||| || ||||||||||||| |||||||||||||||||||||||  ||||  |||||||| ||||||| ||||||||    
T  38747075 aacccatttgtatctctttggaaaaactcattgatagaggattggagagatcaatctctccctcagatcaggtcaag-ttggaccaaactgggt 38747167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 33906123 - 33906024
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||| | | ||||||||||||  ||||||||| |||||| |||| |||||    
T  33906123 tttgtatctctttgtaaagaactcattgatagtagattggaaagatcaatctcttccctagagtaggtcaatgttggaccgagctgggtaaacaattctt 33906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 30793212 - 30793346
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| ||||||||| ||||| |||||||||| | ||||||||||  ||||||| | |||||| ||||   |||||||||||  ||| ||||||||||    
T  30793212 tttgtatctctttgtaaagaactaattgatagtgaagtggagagatc--tctctcccctagagtaagtcattgttggaccgaacaaggtaaacatttctt 30793309  T
Q  124 ggtgctgtctatttttctctactctctttatcttgtttat 163  Q
    ||||   | | | |||||||||||||||||||||||||||    
T  30793310 ggtg---tgtttgtttctctactctctttatcttgtttat 30793346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 42310027 - 42309953
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 99  Q
    ||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||| ||||| | |||||||    
T  42310027 tttgtatctctttgtaagaacttattgatagtggattagcgagatcaatctctcccccatagtagattaagtttg 42309953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 10054909 - 10054732
Alignment:
Q  25 tttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac-atttct 122  Q
    ||||||| ||||||||| |||||||||||||||| |||||||| |||||| ||||| ||| ||| ||| |   ||||||| |||| ||| ||| | |  |    
T  10054909 tttgtatctctttgtaatgaactcattgatagtgtattggagatatcaatatctcccccaaagtgggtaattgttggaccaaactaggtaaacgactctt 10054810  T
Q  123 tggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt 200  Q
    ||||| |||    |||||| |||||| |||||||||||||| || || || ||||||  ||||||| | |||||||||    
T  10054809 tggtgttgttccattttctgtactctttttatcttgtttattttttgcttcgattgtaattttgctttacacttggtt 10054732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 18596881 - 18596924
Alignment:
Q  73 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  18596881 tctctcctccagactaggtcaa-tttggaccgaactgggtcaaca 18596924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 38882340 - 38882383
Alignment:
Q  73 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  38882340 tctctcctccagactaggtcaa-tttggaccgaactgggtcaaca 38882383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 7397 - 7593
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  7397 aacccatttgtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcctctagagtaggttaag-ttggaccgaactgggtgaacat 7495  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7496 ttcttggtgttgt-tatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcacttggtttatagactaggtctat 7593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 45726999 - 45727240
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45726999 aacctatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 45727097  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    || || ||| ||| ||| |||||| ||||||||||||||  |||||  | ||||| ||||||||||||||||||||||| |||||||||||||||||||     
T  45727098 tttttagtgttgt-tatcttttctttactctctttatct--tttattctttggttggattgtggttttgctatgcacttagtttatagactaggtctata 45727194  T
Q  218 ttgtttttattgcttgtgg-ttatttacatttgattattggttgcc 262  Q
    || || || |||||||||| ||||||||||||| ||||| ||||||    
T  45727195 ttattgttgttgcttgtggtttatttacatttggttattagttgcc 45727240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 35446982 - 35446787
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  35446982 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcactctctcctccagagtaggtcaag-ttggaccgaactgggtgaacat 35446884  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    ||||||||| ||| ||| |||||| |||||||||||||||||||||  | |||||  |||||||||||||||||||||| | ||||||||||| |||||    
T  35446883 ttcttggtgttgt-tatcttttctttactctctttatcttgtttatgctttggttgaattgtggttttgctatgcactt-gattatagactagatctat 35446787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 241
Target Start/End: Original strand, 7451192 - 7451410
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttct 122  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||| |    
T  7451192 catttgtatctctttgtaataactcattgatagtggattgcagagatcaatctctcctctacagtaggtcaag-ttgga-cgaactgggtgaacatttat 7451289  T
Q  123 tggtgctgtctatttttctcta--ctctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttg 220  Q
    ||||| ||||||||||||||||  |||||||||||||||||||  | ||||| ||||||||||||| |||||||||| ||| |||| ||| ||||  |||    
T  7451290 tggtgttgtctatttttctctactctctctttatcttgtttattctttggttcgattgtggttttgttatgcacttgttttctagattagatctagattg 7451389  T
Q  221 tttttattgcttgtggttatt 241  Q
    || ||||||||||||||||||    
T  7451390 ttgttattgcttgtggttatt 7451410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 42288208 - 42287966
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca- 117  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| || |     
T  42288208 aacccatttgtatttctttgtaagagctcattgataatggattggagagatcaatctctcc-ccagattaggtcaagtt-ggaccgaactgggtcaataa 42288111  T
Q  118 tttcttggtgctgtctat-ttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctat 216  Q
    |||||||||||||| ||| |||||| ||| ||||||| |||||||||    ||||| |||||||||||| ||||||||||| ||| |||| ||| ||||     
T  42288110 tttcttggtgctgt-tatcttttctttaccctctttaacttgtttattccttggttggattgtggtttttctatgcacttgttttctagattagatctag 42288012  T
Q  217 tttgtttttattgcttgtggttatttacatttgattattggttgcc 262  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||    
T  42288011 attgttgttattgcttgtggttatttacatttggttattggttgcc 42287966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 33648241 - 33648465
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||    
T  33648241 aacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtaaaca 33648340  T
Q  118 tttcttggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctatt 217  Q
    ||| |||||| |||    ||||||||||||||||||||||||||||  | | |||  |||||| ||||||||||||||||| ||||||| |||| |||      
T  33648341 tttattggtgttgttgtcttttctctactctctttatcttgtttattctttagtttaattgtgattttgctatgcacttggcttatagattaggcctaga 33648440  T
Q  218 ttgtttttattgcttgtggttattt 242  Q
    ||||| || ||||| || |||||||    
T  33648441 ttgttgttgttgctcgtagttattt 33648465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 260
Target Start/End: Original strand, 17450671 - 17450884
Alignment:
Q  42 gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgctgtctat-ttttc 140  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||||| |  |||||| ||| ||| |||||    
T  17450671 gaactcattgatagtggattggagagatcaatctctccac-agagtaggtcaagtt-ggaccgaactaggtgaacaatctttggtgttgt-tatcttttc 17450767  T
Q  141 tctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtttttattgcttgtggttat 240  Q
    | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||| ||||| ||  ||||| || |||||||||   ||    
T  17450768 tgtactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttctagattaggtttagattgttgttgttgcttgtg---at 17450864  T
Q  241 ttacatttgattattggttg 260  Q
    ||||||||| |||| |||||    
T  17450865 ttacatttggttatcggttg 17450884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 1631830 - 1631590
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  1631830 aacccatttgtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaatat 1631732  T
Q  119 ttcttggtgctgtctat-ttttctctactctctttatcttgtttat--cttgtggttagattgtggttttgctatgcacttggtttatagactaggtc-- 213  Q
    ||||| ||| ||| ||| |||||  | |||||||||||||||||||  |||    || ||||||||||||||||| ||||| | ||| |||||| |||      
T  1631731 ttcttagtgttgt-tatcttttccttgctctctttatcttgtttattcctt----ttggattgtggttttgctatacactt-gattacagactaagtcta 1631638  T
Q  214 tattttgtttttattgcttgtgg-ttatttacatttgattattggttg 260  Q
    ||| ||||| ||||||||||||| ||||||| ||||| || |||||||    
T  1631637 tatattgttgttattgcttgtggtttatttatatttggttgttggttg 1631590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 36988168 - 36988076
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36988168 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 36988076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 2334510 - 2334418
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2334510 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggggaaca 2334418  T

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Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 5723348 - 5723256
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  5723348 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggttaagtttggaccgaactgggtgaaca 5723256  T

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Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 24398127 - 24398318
Alignment:
Q  19 aacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaac- 116  Q
    ||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||||   |||||||||||||| |||||     
T  24398127 aacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtaggtcattgttggaccgaactggctgaaca 24398226  T
Q  117 atttcttggtgctg---tctatttttctctactctctttatcttgttta-tcttgtggttagattgtggttttgctatgcacttggtttataga 206  Q
    ||| ||||||| ||   |||||||||||||||||||||||||||||||| |||  ||||  ||||| ||||||||||||||||| |||| ||||    
T  24398227 attacttggtgttgttatctatttttctctactctctttatcttgtttagtct--tggtccgattgcggttttgctatgcacttagtttctaga 24398318  T

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Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 6595104 - 6595006
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| |||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6595104 aacccttttgaatctctttgtaagaactcgttgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaaca 6595006  T

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Target: chr2; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 4503224 - 4503133
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4503224 tttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 4503133  T

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Target: chr2; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 45099831 - 45099922
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45099831 tttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 45099922  T

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Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 4484429 - 4484330
Alignment:
Q  19 aacccatttgtatttcttt-gtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4484429 aacccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacagaactgggtgaaca 4484330  T

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Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 30833415 - 30833514
Alignment:
Q  19 aacccatttgtatttcttt-gtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30833415 aacccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggactgaactgggtgaaca 30833514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 723842 - 723706
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||     
T  723842 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaa 723744  T
Q  119 ttcttggtgctgtctatttttctctactctctttatctt 157  Q
    |  |||||| ||| | ||| ||||| |||||||||||||    
T  723743 tctttggtg-tgtttgtttctctcttctctctttatctt 723706  T

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Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 6266777 - 6266859
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6266777 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6266859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 17057463 - 17057370
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  17057463 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtcaag-ttggaccgaactgggtcaaca 17057370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 17085446 - 17085353
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  17085446 catttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtcaag-ttggaccgaactgggtcaaca 17085353  T

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Target: chr2; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 32289650 - 32289732
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32289650 tttgtaagaactcattgatagtaaattagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 32289732  T

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Target: chr2; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 36318107 - 36318010
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||| ||||    
T  36318107 aacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccttagagtaggtcaag-ttggaccgaactgggtcaaca 36318010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 17490232 - 17490143
Alignment:
Q  33 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||| ||||||||||    
T  17490232 tctttgtaagaactcattgatagtggattgtagagatcaatctctcccctagagtaggtcaa-tttggaccgaactgggtaaacatttctt 17490143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 34139852 - 34139732
Alignment:
Q  35 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttggtgctgtcta 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||| |  |||||| ||| |     
T  34139852 tttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatctttggtg-tgtttg 34139755  T
Q  135 tttttctctactctctttatctt 157  Q
    ||| ||||| |||||||||||||    
T  34139754 tttctctcttctctctttatctt 34139732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 38312310 - 38312407
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||| ||||    
T  38312310 aacccatttgtatctctttgtaagatctcattgatagtggattggagagatcaatctctcccccagattatgtcaag-ttggaccgaactgggtcaaca 38312407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 29867939 - 29868031
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 112  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  29867939 aacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccaaattaggtcaag-ttggaccgaactgggt 29868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 13656115 - 13656035
Alignment:
Q  35 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  13656115 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtga 13656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 36205756 - 36205665
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| |||||| ||||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36205756 tttgtatctctttg-aagaactcattgacagcggattggagagttcaatctatcctccagagtaggtcaagtttggaccgaactgggtgaaca 36205665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 12647464 - 12647386
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647464 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 12647386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 36773636 - 36773729
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||| ||||    
T  36773636 catttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattatgtcaag-ttggaccgaactgggtcaaca 36773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 11067375 - 11067472
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||| ||||| ||||||||| |||||||||||| ||| ||||    
T  11067375 aacccatttgtatctctttgtaagaactcatttataatggattgaagagatcaatctctcccccagattaggtcaag-ttggaccgaactcggtcaaca 11067472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 11151689 - 11151592
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||||||||  |||||||||||||| | |||||||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||||    
T  11151689 aacccatttgtatcactttgtaagaactcttagatagtggattggagagatcaacctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 11151592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 33162548 - 33162451
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||||| |||||||||||| ||| ||||    
T  33162548 aacccatttgtatctctctgtaagaactcattgatagtggattagagagatcaatctctcccctagattaggtcaag-ttggaccgaactaggtcaaca 33162451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 42362422 - 42362500
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 97  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  42362422 aacccatttgtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagattaggtcaagtt 42362500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 14633924 - 14633834
Alignment:
Q  19 aacccatttgtatttcttt-gtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactg 109  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  14633924 aacccatttgtatcccttttgtaagaactcatagatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactg 14633834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 206
Target Start/End: Complemental strand, 30218137 - 30217956
Alignment:
Q  25 tttgtatttctttgtaag-aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    ||||||| |||||||||  || ||||||||||||| ||| | ||||||||| |||| |||||||| ||||   |||||| ||||| ||| ||||||| ||    
T  30218137 tttgtatctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagtcattgttggactgaactcggtaaacatttttt 30218038  T
Q  124 ggtgctgtctatttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttataga 206  Q
    ||||  | || |||||||||||||||||||||||||||||  | ||||| |||||||||| || | | |||||||||| ||||    
T  30218037 ggtgtag-ctctttttctctactctctttatcttgtttattctttggtttgattgtggttgtgttttacacttggtttctaga 30217956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 39284930 - 39285003
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  39284930 aactcattgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaaca 39285003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 26353260 - 26353354
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacattt 120  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||| |||||||   ||||||||||||| ||||||||||| |||| |||||||    
T  26353260 tttgtatctttttgtaagtactcattgatagtggattggagagatcactctctcccttagagtaggtcaag-ttggaccgaaccgggtaaacattt 26353354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 11049633 - 11049727
Alignment:
Q  28 gtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttctt 123  Q
    |||| |||||||||||||||||||||||| ||||| | ||||||||||||||| || | ||||||||  |||||| ||||||||| ||||||||||    
T  11049633 gtatctctttgtaagaactcattgatagtagattgaaaagatcaatctctccttcataataggtcaa-attggactgaactgggtaaacatttctt 11049727  T

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Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 11690571 - 11690661
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 110  Q
    |||||||||||||  ||||||||||| || |||||||||||||||||||||||| |||||| ||| | || |||||| ||||||||||||||    
T  11690571 aacccatttgtatccctttgtaagaaatcgttgatagtggattggagagatcaacctctcccccatattacgtcaag-ttggaccgaactgg 11690661  T

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Target: chr2; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 28672022 - 28672088
Alignment:
Q  40 aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 106  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  28672022 aagaactcactgacagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 28672088  T

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Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 7815365 - 7815311
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcc 79  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||    
T  7815365 tttgtatctctttgtaagaactcatttatagtggattggagagattaatctctcc 7815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 14202495 - 14202450
Alignment:
Q  34 ctttgtaagaactcattgatagtggattggagagatcaatctctcc 79  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  14202495 ctttgtaagaactcattgatagtagattggagagatcaatctctcc 14202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 13121843 - 13121901
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctcca 83  Q
    ||||||| ||||||||  |||||||||||||||||||| ||| ||||||||||||||||    
T  13121843 tttgtatctctttgtagaaactcattgatagtggattgaagaaatcaatctctcctcca 13121901  T

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Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 42412117 - 42412162
Alignment:
Q  48 attgatagtggattggagagatcaatctctcctccagagtaggtcaa 94  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  42412117 attgatagtggattggagagatcaatctctcc-ccagagtaggtcaa 42412162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 24197973 - 24198064
Alignment:
Q  26 ttgtatttctttgtaagaa-ctcattgatagtggattggagagatcaatctctcctccaga-gtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||| |||||| ||||| ||| |||||| |||||||||||||||  | ||| ||||||| |||||||| |||||| ||||||||||| ||||    
T  24197973 ttgtatctctttgcaagaaactctttgataatggattggagagatc--tatcttctccagacgtaggtcacgtttgggccgaactgggtaaaca 24198064  T

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Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 42261465 - 42261402
Alignment:
Q  135 tttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt 200  Q
    ||||||| |||||||||||||||| |||| |||  ||| | ||||||||||||||| |||||||||    
T  42261465 tttttctttactctctttatcttgattattttg--gtttgtttgtggttttgctatacacttggtt 42261402  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 42019944 - 42019896
Alignment:
Q  43 aactcattgatagtggattggagagatcaatctctcctccagagtaggt 91  Q
    ||||||||||||||| ||| ||||||||||||||| | ||| |||||||    
T  42019944 aactcattgatagtgaatttgagagatcaatctcttccccatagtaggt 42019896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 42064725 - 42064769
Alignment:
Q  73 tctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||| |||||||| ||||||||||||||||| ||||    
T  42064725 tctctcccccagactaggtcaaatttggaccgaactgggtcaaca 42064769  T

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Target: scaffold0236 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 260
Target Start/End: Original strand, 10565 - 10800
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacatttcttg 124  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  10565 tttgtatctctttgtaagaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtaaacatttcttg 10663  T
Q  125 gtgctgtctat-ttttctctactctc-tttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtctattttgtt 222  Q
    ||| ||| ||| ||| |||||||||| ||||||||||||||  | || ||||||||| ||||| |||| |||||| ||| |||| ||  ||||  |||||    
T  10664 gtgttgt-tatctttcctctactctcttttatcttgtttattctttgattagattgtagttttactatacacttgatttctagattaaatctagattgtt 10762  T
Q  223 tttattgcttgtggttatttacatttgattattggttg 260  Q
     || |||||||||||||||| | |||| |||| |||||    
T  10763 gttgttgcttgtggttattttcttttggttatcggttg 10800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 11631 - 11725
Alignment:
Q  23 catttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11631 catttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 11725  T

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Target: scaffold0002 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 434603 - 434701
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  434603 aacccttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 490300 - 490237
Alignment:
Q  135 tttttctctactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtt 200  Q
    ||||||| |||||||||||||||| |||| |||  ||| | ||||||||||||||| |||||||||    
T  490300 tttttctttactctctttatcttgattattttg--gtttgtttgtggttttgctatacacttggtt 490237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 114678 - 114770
Alignment:
Q  25 tttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  114678 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggttaagtttagaccgaactggatgaaca 114770  T

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Target: scaffold0491 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 8834 - 8735
Alignment:
Q  19 aacccatttgtatttcttt-gtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8834 aacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 11260 - 11161
Alignment:
Q  19 aacccatttgtatttcttt-gtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11260 aacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 11161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 986 - 1083
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||| ||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  986 aacccttttgtatctctttg-aacaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 149194 - 149098
Alignment:
Q  20 acccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||    
T  149194 acccatttatatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggttaag-ttggaccgaactgggtcaaca 149098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 20513 - 20406
Alignment:
Q  19 aacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacat 118  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||     
T  20513 aacccatttgtatctctttgtaagaactctttgatattggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaa 20415  T
Q  119 ttcttggtg 127  Q
    || ||||||    
T  20414 tttttggtg 20406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 3804 - 3729
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3804 aagaactcatttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 3729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 2682 - 2604
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 117  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2682 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 6363 - 6438
Alignment:
Q  40 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||    
T  6363 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggttaagtttggaccgaactgggtga 6438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 27537 - 27439
Alignment:
Q  23 catttgtatttctttgtaag-aactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacattt 120  Q
    ||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||| ||| |||||||||   |||||||||| | ||| |||||||    
T  27537 catttgtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccccatagtaggtcattgttggaccgaattaggtaaacattt 27439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 1370 - 1298
Alignment:
Q  143 tactctctttatcttgtttatcttgtggttagattgtggttttgctatgcacttggtttatagactaggtcta 215  Q
    ||||||||||||||| ||||| || ||||| |||||||||||| || | |||||||||| |||| ||| ||||    
T  1370 tactctctttatcttatttattttttggtttgattgtggttttactttacacttggtttctagattagatcta 1298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 1 - 30
Alignment:
Q  85 agtaggtcaagtttggaccgaactgggtga 114  Q
    ||||||||||||||||||||||||||||||    
T  1 agtaggtcaagtttggaccgaactgggtga 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 80382 - 80338
Alignment:
Q  18 caacccatttgtatttctttgtaagaactcattgatagtggattg 62  Q
    |||||||||||||| | ||||||||||||||| ||||||| ||||    
T  80382 caacccatttgtatctttttgtaagaactcatagatagtgaattg 80338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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