View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2073_low_16 (Length: 252)
Name: NF2073_low_16
Description: NF2073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2073_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35744244 - 35744475
Alignment:
| Q |
1 |
ctcgtctatttttacgatatgcgttggtgacatattgaaagacaaacgtttaacttcaactggattcaactttccaacagcttggactctaagagaccaa |
100 |
Q |
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| T |
35744244 |
ctcgtctatttttacgatatgcgttggtgacatattgaaagacaaacgtttaacttcaactggattcaactttccaacagcttggactctaagagaccaa |
35744343 |
T |
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| Q |
101 |
agacgcggtgaggcacaggaacttcttggactttcactagatcttgaagagtgtttcatgaattcagggagcacagatctaggtgttagaggagatgagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35744344 |
agacgcggtgaggcacaggaacttcttggactttcactagatcttgaagagtgtttcatgaattcagggagcacagatctaggtgttagaggagatgagc |
35744443 |
T |
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| Q |
201 |
agctactatctgaaaatgaagaggttctcgct |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
35744444 |
agctactatctgaaaatgaagaggttctcgct |
35744475 |
T |
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