View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20740_high_1 (Length: 732)

Name: NF20740_high_1
Description: NF20740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20740_high_1
NF20740_high_1
[»] chr2 (28 HSPs)
chr2 (21-732)||(44298341-44299055)
chr2 (274-548)||(20989171-20989437)
chr2 (261-411)||(12764280-12764429)
chr2 (261-413)||(18333295-18333446)
chr2 (261-413)||(28745886-28746033)
chr2 (402-679)||(18333479-18333755)
chr2 (76-231)||(12764128-12764287)
chr2 (274-413)||(28272792-28272932)
chr2 (261-379)||(18879368-18879488)
chr2 (274-379)||(26226783-26226888)
chr2 (261-403)||(26616893-26617031)
chr2 (108-238)||(18879253-18879382)
chr2 (108-232)||(11719357-11719481)
chr2 (261-356)||(5305029-5305124)
chr2 (119-238)||(18333190-18333309)
chr2 (45-230)||(20529219-20529405)
chr2 (45-198)||(12763773-12763927)
chr2 (258-359)||(25301867-25301973)
chr2 (141-238)||(20989073-20989170)
chr2 (108-237)||(26226652-26226781)
chr2 (79-238)||(26617017-26617182)
chr2 (119-238)||(5305110-5305229)
chr2 (402-548)||(12764437-12764592)
chr2 (360-413)||(28745859-28745911)
chr2 (119-195)||(28276765-28276841)
chr2 (361-413)||(28745832-28745883)
chr2 (120-195)||(18878773-18878848)
chr2 (160-238)||(25301956-25302034)
[»] chr7 (31 HSPs)
chr7 (258-679)||(27316855-27317305)
chr7 (264-393)||(26927035-26927164)
chr7 (261-393)||(7067405-7067538)
chr7 (261-385)||(41934684-41934810)
chr7 (360-667)||(41934369-41934665)
chr7 (108-238)||(7067289-7067419)
chr7 (261-382)||(23554124-23554245)
chr7 (45-238)||(41934796-41934992)
chr7 (119-238)||(23554019-23554138)
chr7 (261-384)||(7413466-7413584)
chr7 (264-359)||(150785-150879)
chr7 (45-238)||(12083620-12083814)
chr7 (170-238)||(3925424-3925492)
chr7 (58-224)||(26926865-26927032)
chr7 (45-195)||(16886292-16886443)
chr7 (119-237)||(27317289-27317406)
chr7 (45-232)||(36337904-36338092)
chr7 (287-403)||(11826559-11826675)
chr7 (45-183)||(41935147-41935286)
chr7 (120-238)||(16650897-16651014)
chr7 (120-238)||(17625257-17625374)
chr7 (264-326)||(18150133-18150195)
chr7 (121-196)||(12309471-12309546)
chr7 (361-403)||(21613758-21613800)
chr7 (119-200)||(31267338-31267419)
chr7 (119-183)||(27317684-27317748)
chr7 (49-199)||(7066920-7067071)
chr7 (507-565)||(4230611-4230669)
chr7 (263-297)||(9651831-9651865)
chr7 (507-548)||(17184338-17184379)
chr7 (507-548)||(43350422-43350463)
[»] chr8 (17 HSPs)
chr8 (261-420)||(26140891-26141049)
chr8 (46-232)||(24629384-24629573)
chr8 (261-413)||(24629241-24629392)
chr8 (261-393)||(10205320-10205449)
chr8 (61-238)||(10205154-10205334)
chr8 (261-393)||(12504201-12504327)
chr8 (360-652)||(27784356-27784650)
chr8 (261-376)||(27784184-27784300)
chr8 (261-359)||(22842676-22842779)
chr8 (119-238)||(22842765-22842884)
chr8 (108-238)||(26140775-26140905)
chr8 (44-232)||(32108353-32108541)
chr8 (329-398)||(16093452-16093525)
chr8 (45-183)||(24629717-24629855)
chr8 (151-238)||(27784111-27784198)
chr8 (373-436)||(24629191-24629253)
chr8 (108-193)||(12784676-12784761)
[»] chr6 (35 HSPs)
chr6 (261-413)||(21864144-21864295)
chr6 (287-409)||(24560585-24560706)
chr6 (261-393)||(14096371-14096505)
chr6 (261-393)||(30764293-30764427)
chr6 (261-393)||(33201115-33201249)
chr6 (49-238)||(20244745-20244941)
chr6 (49-238)||(22138729-22138925)
chr6 (261-379)||(18743328-18743448)
chr6 (261-386)||(20244927-20245052)
chr6 (261-386)||(22138911-22139036)
chr6 (291-403)||(3096849-3096965)
chr6 (274-379)||(2402731-2402836)
chr6 (45-238)||(33200928-33201129)
chr6 (79-238)||(30764413-30764575)
chr6 (119-223)||(5972517-5972621)
chr6 (141-225)||(18743451-18743535)
chr6 (119-238)||(3096978-3097097)
chr6 (59-195)||(24560080-24560217)
chr6 (140-200)||(19243451-19243511)
chr6 (359-403)||(23911628-23911672)
chr6 (119-238)||(3386298-3386417)
chr6 (120-223)||(8711514-8711617)
chr6 (79-196)||(19243058-19243178)
chr6 (125-238)||(14096272-14096385)
chr6 (45-232)||(22961899-22962087)
chr6 (45-232)||(23826306-23826494)
chr6 (140-232)||(24560472-24560564)
chr6 (287-326)||(802008-802047)
chr6 (119-194)||(11117197-11117271)
chr6 (360-403)||(14482300-14482343)
chr6 (193-238)||(2402685-2402730)
chr6 (507-548)||(21863946-21863987)
chr6 (559-648)||(24560859-24560948)
chr6 (359-412)||(30764167-30764219)
chr6 (360-413)||(30764193-30764245)
[»] chr1 (25 HSPs)
chr1 (261-413)||(11788474-11788627)
chr1 (261-385)||(19261752-19261878)
chr1 (261-403)||(22923080-22923222)
chr1 (261-403)||(27574558-27574701)
chr1 (263-403)||(15472176-15472317)
chr1 (261-362)||(48706270-48706372)
chr1 (61-230)||(27259864-27260034)
chr1 (108-238)||(22923208-22923338)
chr1 (45-238)||(27574687-27574881)
chr1 (120-238)||(19261864-19261982)
chr1 (78-238)||(27800253-27800414)
chr1 (507-548)||(23343655-23343696)
chr1 (191-232)||(48706364-48706405)
chr1 (119-183)||(11789011-11789075)
chr1 (119-183)||(21760253-21760317)
chr1 (80-183)||(39899722-39899828)
chr1 (108-195)||(19262267-19262354)
chr1 (261-323)||(27260028-27260090)
chr1 (364-393)||(5766252-5766281)
chr1 (360-413)||(11788447-11788499)
chr1 (49-101)||(16279038-16279088)
chr1 (507-548)||(19261532-19261573)
chr1 (507-548)||(35585933-35585974)
chr1 (151-212)||(36321528-36321589)
chr1 (507-548)||(37779284-37779325)
[»] chr5 (38 HSPs)
chr5 (261-392)||(10976825-10976956)
chr5 (264-393)||(31488725-31488854)
chr5 (261-382)||(6998365-6998486)
chr5 (261-403)||(23227933-23228075)
chr5 (261-379)||(19748706-19748826)
chr5 (261-413)||(8531504-8531657)
chr5 (45-232)||(16417557-16417749)
chr5 (299-403)||(15794575-15794683)
chr5 (261-379)||(25359925-25360043)
chr5 (277-393)||(31238707-31238822)
chr5 (79-212)||(10976400-10976538)
chr5 (18-238)||(31488513-31488736)
chr5 (45-238)||(19748526-19748720)
chr5 (45-232)||(31238511-31238697)
chr5 (287-359)||(16417470-16417542)
chr5 (45-238)||(34595771-34595968)
chr5 (262-359)||(36311268-36311369)
chr5 (45-199)||(10976070-10976225)
chr5 (485-679)||(31488932-31489125)
chr5 (108-238)||(15794704-15794833)
chr5 (79-184)||(16417924-16418032)
chr5 (45-232)||(6998478-6998668)
chr5 (59-238)||(26604058-26604238)
chr5 (120-238)||(19575774-19575892)
chr5 (45-238)||(23228061-23228257)
chr5 (45-214)||(25360268-25360438)
chr5 (120-238)||(25360029-25360147)
chr5 (45-238)||(36311356-36311552)
chr5 (108-231)||(11477360-11477483)
chr5 (119-194)||(37397341-37397416)
chr5 (364-398)||(10398659-10398693)
chr5 (204-238)||(10976805-10976839)
chr5 (141-239)||(28718721-28718819)
chr5 (358-412)||(31238814-31238867)
chr5 (364-393)||(10398549-10398578)
chr5 (504-577)||(10978425-10978498)
chr5 (358-403)||(18921534-18921579)
chr5 (364-393)||(31238928-31238957)
[»] chr3 (26 HSPs)
chr3 (263-393)||(43688474-43688605)
chr3 (261-413)||(50341679-50341832)
chr3 (45-238)||(17266743-17266936)
chr3 (290-393)||(1637943-1638046)
chr3 (119-238)||(29515659-29515777)
chr3 (108-238)||(17371433-17371563)
chr3 (274-398)||(1885975-1886106)
chr3 (485-606)||(17371776-17371897)
chr3 (287-358)||(773895-773966)
chr3 (45-153)||(1886343-1886452)
chr3 (61-238)||(29634373-29634553)
chr3 (317-393)||(11162374-11162449)
chr3 (59-195)||(29788047-29788183)
chr3 (78-238)||(50341818-50341983)
chr3 (120-231)||(29787701-29787812)
chr3 (507-548)||(27096720-27096761)
chr3 (264-379)||(17371552-17371672)
chr3 (119-232)||(1638069-1638180)
chr3 (191-232)||(11162488-11162529)
chr3 (364-413)||(15637574-15637622)
chr3 (141-232)||(1886113-1886204)
chr3 (493-548)||(50458280-50458335)
chr3 (361-403)||(7955428-7955470)
chr3 (507-548)||(10052386-10052427)
chr3 (360-397)||(15637597-15637634)
chr3 (507-548)||(51012316-51012357)
[»] scaffold0258 (1 HSPs)
scaffold0258 (275-385)||(9358-9468)
[»] chr4 (27 HSPs)
chr4 (274-412)||(25145406-25145542)
chr4 (274-413)||(24075973-24076109)
chr4 (359-421)||(28170906-28170968)
chr4 (261-379)||(20758393-20758507)
chr4 (261-379)||(20764784-20764898)
chr4 (45-238)||(20758493-20758689)
chr4 (45-238)||(20764884-20765080)
chr4 (45-238)||(23124229-23124423)
chr4 (119-232)||(24075853-24075966)
chr4 (291-403)||(23124101-23124216)
chr4 (108-238)||(44101114-44101245)
chr4 (359-413)||(13866946-13867000)
chr4 (272-359)||(23620342-23620430)
chr4 (359-403)||(3394169-3394213)
chr4 (160-231)||(24576513-24576584)
chr4 (119-195)||(20759001-20759077)
chr4 (119-195)||(20765392-20765468)
chr4 (119-195)||(24075354-24075430)
chr4 (108-232)||(25145275-25145399)
chr4 (119-183)||(31931851-31931915)
chr4 (261-301)||(44101231-44101271)
chr4 (263-297)||(13522856-13522890)
chr4 (361-403)||(24607835-24607877)
chr4 (364-393)||(13855152-13855181)
chr4 (122-231)||(14089301-14089410)
chr4 (507-548)||(17292805-17292846)
chr4 (358-403)||(31324844-31324889)
[»] scaffold0018 (1 HSPs)
scaffold0018 (261-389)||(122458-122583)
[»] scaffold0500 (2 HSPs)
scaffold0500 (261-385)||(2998-3125)
scaffold0500 (152-238)||(3111-3197)
[»] scaffold0086 (1 HSPs)
scaffold0086 (45-232)||(45862-46050)
[»] scaffold0027 (3 HSPs)
scaffold0027 (287-379)||(37345-37434)
scaffold0027 (108-225)||(37197-37314)
scaffold0027 (45-101)||(37032-37086)
[»] scaffold0015 (1 HSPs)
scaffold0015 (108-228)||(22117-22237)
[»] scaffold0123 (1 HSPs)
scaffold0123 (302-379)||(36157-36234)
[»] scaffold0001 (1 HSPs)
scaffold0001 (300-359)||(502936-502996)
[»] scaffold0591 (1 HSPs)
scaffold0591 (119-194)||(3238-3313)


Alignment Details
Target: chr2 (Bit Score: 668; Significance: 0; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 668; E-Value: 0
Query Start/End: Original strand, 21 - 732
Target Start/End: Original strand, 44298341 - 44299055
Alignment:
Q  21 aatacattcatttacatcgctgtccatcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgttttctcttcctact 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44298341 aatacattcatttacatcgctgtccatcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgttttctcttcctact 44298440  T
Q  121 tttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaac 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44298441 tttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaac 44298540  T
Q  221 atcatgatgataacacattcgaggataatgtaacgtaatgatgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaat 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44298541 atcatgatgataacacattcgaggataatgtaacgtaatgatgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaat 44298640  T
Q  321 aaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatttattcaatacacaacttttattcaaatttattcaataccaaaatg 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44298641 aaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatttattcaatacacaacttttattcaaatttattcaataccaaaatg 44298740  T
Q  421 tgcaacatatcaaaaatcattaaaaaacatccgaacaaccaagacattttaagtcattatattgatcaactccctcaccacttaattcaattgggttgtc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44298741 tgcaacatatcaaaaatcattaaaaaacatccgaacaaccaagacattttaagtcattatattgatcaactccctcaccacttaattcaattgggttgtc 44298840  T
Q  521 ctcgacaatttctggggcacctgcttttagatgcgaatcaaaataacaggttcttcctcttcgtcccgtcttgttgaaattgtacacgggcatattcacc 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44298841 ctcgacaatttctggggcacctgcttttagatgcgaatcaaaataacaggttcttcctcttcgtcccgtcttgttgaaattgtacacgggcatattcacc 44298940  T
Q  621 ttacttttttgtctggttccttcacatttgatatcgtaccatgtcacggcggtttttgc---nnnnnnnnnnncttctcaccctccttttttatatgagc 717  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||    
T  44298941 ttacttttttgtctggttccttcacatttgatatcgtaccatgtcacggcggtttttgctttttttttcttttcttctcaccctccttttttatatgagc 44299040  T
Q  718 atctccatgtctctg 732  Q
    |||||||||||||||    
T  44299041 atctccatgtctctg 44299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 274 - 548
Target Start/End: Original strand, 20989171 - 20989437
Alignment:
Q  274 atatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaa 373  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||    
T  20989171 atatttagggagaatgtaatgtaacatagataaaattaaaactaaataaaattgtgtattttttgaattgatttcgtgtacttgtgcaactttattcaaa 20989270  T
Q  374 tttattcaatacacaacttttattcaaatttattcaataccaaaatgtgcaacatatcaaaaatcattaaaaaacatccgaacaaccaagacattttaag 473  Q
    ||||||||| || |||| ||||||||||||||||| |||| |||||| |||||||||||         ||||||||||| || ||  ||||||||  |||    
T  20989271 tttattcaaaacgcaacctttattcaaatttattccatacaaaaatgcgcaacatatca---------aaaaaacatccaaaaaagaaagacattacaag 20989361  T
Q  474 tcattata-ttgatcaactccctcaccacttaattcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
     ||||| | || |||| |||||||  ||||||| |||  |||||||||||||||||||  |||||||| |||||||    
T  20989362 ccattacatttaatcatctccctcgtcacttaagtcagctgggttgtcctcgacaattcgtggggcacttgctttt 20989437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 261 - 411
Target Start/End: Original strand, 12764280 - 12764429
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||  |||||||    
T  12764280 atgatgatgccacatatttagggagaatgtaatgtaacgtagatgaaattaaaactaaataaaattgtgtattttttgaattgatttcgtgctcttgtgc 12764379  T
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatttattcaat 411  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  12764380 aactttattcgaatttattcaatacacaac-tttattcaaattgattcaat 12764429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 261 - 413
Target Start/End: Original strand, 18333295 - 18333446
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||   || ||||||||||||||| ||||||||||||    
T  18333295 atgatgataccacatatttagggagaatataatgtaacttagatgaaattaaaactaaataaaattgtataatttttgaattgatttcgtgtacttgtgc 18333394  T
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||    
T  18333395 aactttattcgaatttattcaacacacaac-tttattcgaatttatccaatac 18333446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 261 - 413
Target Start/End: Complemental strand, 28746033 - 28745886
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| |||||||||||     ||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  28746033 atgatgataccacatatatttagggagaatgtaatgtaa-----atgaaattaaaactaaataaaattgtgtatttttt-aatttattttgtgtacttgt 28745940  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    || ||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  28745939 gccactttattcgaatttattcaatacacaac-tttaatcgaatttattcaatac 28745886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 679
Target Start/End: Original strand, 18333479 - 18333755
Alignment:
Q  402 tttattcaataccaaaatgtgcaacatatcaaaaatcattaaaaaacatccgaacaac-caagacattttaagtcattatattga-tcaactccctcacc 499  Q
    ||||||||||||||||||| ||  ||||||||||| ||| |||||| ||   |||||  |||||||||  ||| ||||| ||| | ||| |||||||  |    
T  18333479 tttattcaataccaaaatgcgcggcatatcaaaaaacataaaaaaaaata--aacaaatcaagacattacaagccattacatttaatcatctccctcgtc 18333576  T
Q  500 acttaattcaattgggttgtcctcgacaatttctggggcacctgcttttagatgcgaatcaaaataacaggttcttcctcttcgtcccgtcttgttgaaa 599  Q
     ||||| ||||||||||||||||| ||| ||  |||| ||||| ||||| |||||||| ||||||||||||||||||| || |||| | ||||||| |||    
T  18333577 gcttaagtcaattgggttgtcctcaacagttcatggg-cacctccttttggatgcgaaccaaaataacaggttcttccgctccgtctcatcttgttaaaa 18333675  T
Q  600 ttgtacacgggcatattcaccttacttttttgtctggttccttcacatttgatatcgtaccatgtcacggcggtttttgc 679  Q
    ||||||||||||| |||| |||| |||||||||| | |||||||||||| |||| | |  |||||||| | |||||||||    
T  18333676 ttgtacacgggcacattcgccttgcttttttgtccgattccttcacattcgataccatgtcatgtcacagtggtttttgc 18333755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 12764128 - 12764287
Alignment:
Q  76 atatatatagttgatttggtagaata--agtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatact 170  Q
    ||||||||||||||||| ||||||||  ||||||   |||||||| | ||||||||||||||||||  |  ||||||| ||||||||| ||||||| |||    
T  12764128 atatatatagttgatttagtagaatactagtgttctgttctcttcattcttttgagttttcaaagactgc-gcaaatccctacactaagtataagacact 12764226  T
Q  171 ttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgat 231  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||    
T  12764227 ttaataccaacattttgagaaaactttcaagaatataattaaaactcaacatcatgatgat 12764287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 274 - 413
Target Start/End: Complemental strand, 28272932 - 28272792
Alignment:
Q  274 atatttagggaggatgtaatgtaacgtagatgaaattaaaactaaata--aaattacgtattttttgaattgattttgtgtacttgtgcaactttattcg 371  Q
    |||| ||||||| ||||||||| | |||||||||||||||||||||||  |||||  |||| |||| ||||||||||||||| |||||||||||||||||    
T  28272932 atatgtagggagaatgtaatgttatgtagatgaaattaaaactaaatataaaattgtgtatatttttaattgattttgtgtaattgtgcaactttattcg 28272833  T
Q  372 aatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    ||||||||| |||| |||| ||||||||||||||||| ||||    
T  28272832 aatttattccatacgcaac-tttattcaaatttattcgatac 28272792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 261 - 379
Target Start/End: Original strand, 18879368 - 18879488
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  ||| |||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  18879368 atgatgataccacatatatttaaggagaatgtaatgtaatgtagatgaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtaattgt 18879467  T
Q  359 gcaactttattcgaatttatt 379  Q
    |  ||||||||||||||||||    
T  18879468 gtcactttattcgaatttatt 18879488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 26226783 - 26226888
Alignment:
Q  274 atatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaa 373  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||||||  ||||||||| ||||||||||||||| || ||| ||||||||||||    
T  26226783 atatttagggagaatgtaatgtaatgcagatgaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtaattttgccactttattcgaa 26226882  T
Q  374 tttatt 379  Q
    ||||||    
T  26226883 tttatt 26226888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 261 - 403
Target Start/End: Complemental strand, 26617031 - 26616893
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||||||||     ||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  26617031 atgatgataccacatatatttagggagaatgtaatgta-----gattaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtacttgt 26616937  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    || ||||| |||||||||||||||||| ||| |||||||| ||||    
T  26616936 gccacttttttcgaatttattcaatacgcaa-ttttattcgaatt 26616893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 18879253 - 18879382
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||||| ||||||| | ||| |||||||| |||| |||| ||||||| |||| |||||||||||||||||||||||||||| ||  ||    
T  18879253 ttctcttcattcttttgacttttcaatg-gggctgcaaatcactacgctaagtataagacacttcaataccaacattttgagcaaactttcaataactta 18879351  T
Q  208 atttaaacccaacatcatgatgataacacat 238  Q
    ||||||||||||||||||||||||| |||||    
T  18879352 atttaaacccaacatcatgatgataccacat 18879382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 11719357 - 11719481
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | |||||||||||||||| ||  |||||||| | || ||||||||||||| |||| ||| |||||||||||||||||| ||||| |||  |    
T  11719357 ttctcttcattcttttgagttttcaaacagacttgcaaatttttaaactaactataagacacttcaatcccaacattttgagcaaacattcaacaattaa 11719456  T
Q  208 atttaaacccaacatcatgatgata 232  Q
    |||||||  ||||||||||||||||    
T  11719457 atttaaattcaacatcatgatgata 11719481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 5305124 - 5305029
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtactt 356  Q
    ||||||||||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||||  |||||||| || ||||||| ||||||||    
T  5305124 atgatgataccacatatttagggagaatgtaatgtaaagtatattaaattaaagctaaataaaattgtgtatttttggatttgatttcgtgtactt 5305029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 18333190 - 18333309
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||||||||||||||| | | |||| |||| |||||||| ||||||| |||| ||| ||||| ||||   ||||||||||| |||| ||||||||||||    
T  18333190 cttttgagttttcaaagggcgctgcacatctttacactaagtataagacacttcaatcccaactttttccacaaactttcaacaataaaatttaaaccca 18333289  T
Q  219 acatcatgatgataacacat 238  Q
    |||||||||||||| |||||    
T  18333290 acatcatgatgataccacat 18333309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 45 - 230
Target Start/End: Complemental strand, 20529405 - 20529219
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata---agtgttttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| |  ||||||||||||| ||| ||||||  ||||||| |||||||||   | ||| |||||| | |  ||||||||||||||||||  ||    
T  20529405 catcttatatgaaggaattcgatgtgagaacctatata--gttgattcggtagaatacaaaatgtgttctctacattattttgagttttcaaagagactt 20529308  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatga 230  Q
    | |||| | |||||||| ||||||| |||| ||| |||||||||| | ||||||||||  ||| ||||||||| |||||||||||||||    
T  20529307 gtaaatttttacactaagtataagacacttcaatgccaacattttcaacaaactttcatgaatttaatttaaatccaacatcatgatga 20529219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 12763927 - 12763773
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggtt 141  Q
    ||||||||| ||| ||||||||||||||||||||||||  |||||||| ||| ||||  ||||   |||||||| | ||||||| |||||||||||  ||    
T  12763927 catcttatacaagggaattcgatgtgaaaacatatata--gttgattttgtaaaatacatgttgtgttctcttcattcttttgacttttcaaagagtctt 12763830  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttc 198  Q
    |||||||| ||| |||  ||||||| |||||||||| ||||| || | |||||||||    
T  12763829 gcaaatctttacgctatgtataagacactttaatactaacatctttaacaaactttc 12763773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 25301973 - 25301867
Alignment:
Q  258 atgatgatgataccacatatttagggaggatgt-----aatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgt 352  Q
    |||||||||||| |||||| |||||||| ||||     ||||||||||| |||||||||||| |||||||||||  ||||||||| |||| ||| || ||    
T  25301973 atgatgatgatatcacatacttagggagaatgtgatataatgtaacgtatatgaaattaaaattaaataaaattgtgtattttttaaatttattatgcgt 25301874  T
Q  353 acttgtg 359  Q
    |||||||    
T  25301873 acttgtg 25301867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 20989073 - 20989170
Alignment:
Q  141 tgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||||||||||   || ||||||| |||| ||| ||  ||||||  |||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  20989073 tgcaaatctctacctgaagtataagacacttcaatgccgtcattttcggcaaacattcaagaatataatttaaacccaacatcatgatgatatcacat 20989170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 26226652 - 26226781
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||||| |||||| || | | |||||||| |||| |||| ||||||| |||| ||| |||| |||||  ||||||||||||   | ||    
T  26226652 ttctcttcattcttttgacttttcatagggcgctgcaaatcactacgctaagtataagacacttcaatgccaatattttccgcaaactttcaactgttta 26226751  T
Q  208 atttaaacccaacatcatgatgataacaca 237  Q
    ||||||| ||||||||||||||||| ||||    
T  26226752 atttaaatccaacatcatgatgatagcaca 26226781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 238
Target Start/End: Complemental strand, 26617182 - 26617017
Alignment:
Q  79 tatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatacttta 173  Q
    ||||||||||||||| |||||||   |||||   |||||||| | ||||||| ||||||||||  ||||||||||||||  | || |||| || |||| |    
T  26617182 tatatagttgatttgctagaatacatgtgttgtgttctcttcattcttttgacttttcaaagaaagttgcaaatctctatccgaagtatacgacacttca 26617083  T
Q  174 ataccaaca-ttttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    || |||||| ||||  |||||||| |||||||  || ||||| ||||||||||||||||| |||||    
T  26617082 atcccaacagtttttcgcaaacttccaaaaattaaacttaaatccaacatcatgatgataccacat 26617017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 5305229 - 5305110
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||||||||||||||||| ||||||||| | ||| |||| ||||||| |||| ||| |  || |  |  |||||||||||| ||| |||||||||| ||    
T  5305229 cttttgagttttcaaagagagttgcaaatttttacgctaagtataagacacttcaatgctgacttacttggcaaactttcaagaatttaatttaaactca 5305130  T
Q  219 acatcatgatgataacacat 238  Q
    | |||||||||||| |||||    
T  5305129 atatcatgatgataccacat 5305110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 548
Target Start/End: Original strand, 12764437 - 12764592
Alignment:
Q  402 tttattcaataccaaaatgtgcaacatatcaaaaatcattaaaaaaca--------tccgaacaaccaagacattttaagtcattatattga-tcaactc 492  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||| |        ||| || ||||||||||||  ||| ||||| ||| | ||| |||    
T  12764437 tttattcaataccaaaatgcgcaacatatcaaaaaacataaaaaaaaaaaaaaaaatccaaaaaaccaagacattacaagccattacatttaatcatctc 12764536  T
Q  493 cctcaccacttaattcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||| ||| ||| ||||||||||||||||||| | ||  ||||||||||| ||||    
T  12764537 cctcagcacataagtcaattgggttgtcctcgatagttcgtggggcacctgttttt 12764592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 28745911 - 28745859
Alignment:
Q  360 caactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||||||||||||    
T  28745911 caactttaatcgaatttattcaatacaaaac-tttattcaaatttattcaatac 28745859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 28276765 - 28276841
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaact 195  Q
    ||||||| ||| |||||||| ||||||||| ||||| | | ||||||| |||| ||||||||||| || ||||||||    
T  28276765 cttttgactttccaaagaggcttgcaaatcactacattcagtataagacacttcaataccaacatcttcagcaaact 28276841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 28745883 - 28745832
Alignment:
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    |||||||||| |||||||||||||| |||| |||||| |||||||||||||||    
T  28745883 aactttattcaaatttattcaatacgcaac-tttatttaaatttattcaatac 28745832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 18878848 - 18878773
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaact 195  Q
    |||||| |||| ||||||| ||||||||| ||||| | | ||||||| |||| ||||||||||| || ||||||||    
T  18878848 ttttgactttttaaagaggcttgcaaatcactacattcagtataagacacttcaataccaacatcttcagcaaact 18878773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 25302034 - 25301956
Alignment:
Q  160 tataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    ||||||| ||||||||| |||||||||   |||||||| || ||| ||||||||||| | ||| ||||||||| |||||    
T  25302034 tataagacactttaatatcaacattttttacaaacttttaagaatttaatttaaaccaagcatgatgatgatatcacat 25301956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 1e-61; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 258 - 679
Target Start/End: Complemental strand, 27317305 - 27316855
Alignment:
Q  258 atgatgatgataccaca--tatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtact 355  Q
    |||||||||||||||||  ||||||||||| | ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  27317305 atgatgatgataccacaaatatttagggagaacgtaatgtaatgtagatgaaattaaaactaaataaaattgtgtattttttgaattgattttgtgtact 27317206  T
Q  356 tgtgcaactttattcgaatttattcaatacacaact----------------tttattcaaatttattcaataccaaaatgt----------gcaacata 429  Q
    ||||||||||||||  |||||||  |||||||||||                ||||||||||||||||||||| ||||||||          ||  ||||    
T  27317205 tgtgcaactttatttaaatttatctaatacacaactttattcaaaacgcagctttattcaaatttattcaatatcaaaatgtacgaaaatgcgcggcata 27317106  T
Q  430 tcaaaaatcattaaaaaacatccgaaca-accaagacattttaagtcattatatt-gatcaactccctcaccacttaattcaattgggttgtcctcgaca 527  Q
    || |||| ||| |||||| |||| |||| | |||||||||  ||  ||||| |||  |||| |||||||| | ||||| |||||||||||||||| ||||    
T  27317105 tccaaaaacataaaaaaatatcc-aacatatcaagacattacaaaccattacattcaatcatctccctcatcgcttaagtcaattgggttgtcctagaca 27317007  T
Q  528 atttctggggcacctgcttttagatgcgaatcaaaataacaggttcttcctcttcgtcccgtcttgttgaaattgtacacgggcatattcaccttacttt 627  Q
     || || |||||||||||||| | ||   | |||||||||| |||||||| || | || | |||||||||||||||||| ||||| |||||||||  |||    
T  27317006 gttcctagggcacctgcttttggttgtagaccaaaataacaagttcttccgctccatctcatcttgttgaaattgtacatgggcacattcaccttgtttt 27316907  T
Q  628 tttgtctggttccttcacatttgatatcgtaccatgtcacggcggtttttgc 679  Q
    ||||||||||||||||||||| |||| ||| ||||||||| | |||||||||    
T  27316906 tttgtctggttccttcacattcgataccgtgccatgtcacagtggtttttgc 27316855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 26927035 - 26927164
Alignment:
Q  264 atgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaac 363  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||    
T  26927035 atgatacaacttatttagggagaatgtaatgtaacgtaggtgaaattaaaactaaataaaactgtgtattttttgaattgatttcgtgtacttgtgcaac 26927134  T
Q  364 tttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||||||||||||||| ||||||    
T  26927135 tttattcgaatttattcaatacagaacttt 26927164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 261 - 393
Target Start/End: Original strand, 7067405 - 7067538
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgta-ttttttgaattgattttgtgtacttgtg 359  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||  ||| |||||| ||||||||| |||||||||||    
T  7067405 atgatgataccacatatttagggagaatataatgtaacgtagatgaaattaaaattaaataaaattgtgtattttttttaattgatttcgtgtacttgtg 7067504  T
Q  360 caactttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||||||||||||| |||  |||||||    
T  7067505 caactttattcgaatttattctatatgcaacttt 7067538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 41934810 - 41934684
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgta-ttttttgaattgattttgtgtacttgtg 359  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||| |||||||||||    
T  41934810 atgatgataccacatatttaggaagaatgtaatgtaacgtagatgaaattaaaaccaaataaaattgtgtatttttttgaattgatttcgtgtacttgtg 41934711  T
Q  360 caac-tttattcgaatttattcaatac 385  Q
    |||| ||||||| ||||||||||||||    
T  41934710 caacttttattcaaatttattcaatac 41934684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 360 - 667
Target Start/End: Complemental strand, 41934665 - 41934369
Alignment:
Q  360 caactttattcgaatttattcaatacacaacttttattcaaatttattcaataccaaaatgtgcaacatatcaaaaatcattaaaaaacatccgaacaac 459  Q
    ||||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||| ||| |||||||||||          |||||| || ||     
T  41934665 caactttattcgaatttattcaaaacacaacttt-attcaaaaaaattcaataccaaaatgcgcagcatatcaaaaa----------acatccaaaaaat 41934577  T
Q  460 caagacattttaagtcattatattga-tcaactccctcaccacttaattcaattgggttgtcctcgacaatttctggggcacctgcttttagatgcgaat 558  Q
    |||||||||| ||| ||||| ||| | |||  ||||||   |||||| ||||||||||||||||||||| || ||||| ||||||||||| | |||| ||    
T  41934576 caagacatttaaagccattacatttaatcatttccctcgttacttaagtcaattgggttgtcctcgacagttcctggg-cacctgcttttggctgcggat 41934478  T
Q  559 caaaataacaggttcttcctcttcgtcccgtcttgttgaaattgtacacgggcatattcaccttacttttttgtctggttccttcacatttgatatcgta 658  Q
    | ||||||||||||||| | ||| ||| | ||||||  |||||||||||  ||||||| |||||  ||||||||||  ||| |||||||| ||||||||     
T  41934477 cgaaataacaggttctttcgcttggtctcatcttgtgtaaattgtacacaagcatatttaccttgtttttttgtcttattcattcacattcgatatcgtg 41934378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 7067289 - 7067419
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||| |||||||||||   | |||||||||| || |||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  7067289 ttctcttcattcttttaagttttcaaagtatgctgcaaatctcgacgctaagtataagacactttaataccaacattttgagcaaacattcaataatata 7067388  T
Q  208 atttaaacccaacatcatgatgataacacat 238  Q
    ||||||||||||||||||||||||| |||||    
T  7067389 atttaaacccaacatcatgatgataccacat 7067419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 261 - 382
Target Start/End: Original strand, 23554124 - 23554245
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||||||||||||||||  ||||| ||||||||||| |||||| |||||||||||||||||||||   ||||||||||||||||||  |||| ||||||    
T  23554124 atgatgataccacatattgggggagcatgtaatgtaatgtagataaaattaaaactaaataaaattgtatattttttgaattgatttaatgtatttgtgc 23554223  T
Q  361 aactttattcgaatttattcaa 382  Q
    |||||||||| |||||||||||    
T  23554224 aactttattcaaatttattcaa 23554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 41934992 - 41934796
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaat--aagtgtt---ttctcttcctacttttgagttttcaaagaggg 139  Q
    |||||||||  || ||||||||||||||||||||||||  ||||||||||||||||  || ||||   |||||||| | ||||||||||||||||    |    
T  41934992 catcttatacgagggaattcgatgtgaaaacatatata--gttgatttggtagaatgcaactgttgtgttctcttcattcttttgagttttcaaatgatg 41934895  T
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
     || |||| | ||| |||| |||||||  |||||||| ||||||||| ||||||||||||| |||| ||||| ||||||||| |||||||||| |||||    
T  41934894 ctgtaaatttttacgctaagtataagaccctttaatatcaacattttaagcaaactttcaagaataaaattttaacccaacaccatgatgataccacat 41934796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 23554019 - 23554138
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    |||||||||||||||| |   |||||||| | |||||||| ||||||| |||||| |||||| |||||||||||||||| || ||| ||||||||||| |    
T  23554019 cttttgagttttcaaacacacttgcaaatttttacactaagtataagacactttattaccaatattttgagcaaacttttaacaatttaatttaaaccaa 23554118  T
Q  219 acatcatgatgataacacat 238  Q
    |||||||||||||| |||||    
T  23554119 acatcatgatgataccacat 23554138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 261 - 384
Target Start/End: Complemental strand, 7413584 - 7413466
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| |||||||||      ||||||||||||||||||||| ||||  |||||||| ||||||||||||||| ||||    
T  7413584 atgatgataccacatatatttagggagaatgtaatgtt-----gatgaaattaaaactaaataagatta--tatttttttaattgattttgtgtatttgt 7413492  T
Q  359 gcaactttattcgaatttattcaata 384  Q
    || ||||||||| |||||||||||||    
T  7413491 gccactttattcaaatttattcaata 7413466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 264 - 359
Target Start/End: Original strand, 150785 - 150879
Alignment:
Q  264 atgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtg 359  Q
    ||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||| ||||  ||||||| |||||||||| ||||||||||||    
T  150785 atgataccacatatttatgaaa-atgtaatgtaacgtagttgaaattaaaactaaatacaattgtgtattttctgaattgattatgtgtacttgtg 150879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 12083620 - 12083814
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt-ttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| || ||||||||||||||||| |||||| |  |||||| | ||||||   ||||| |||||||| | |||||||||||||||| ||  ||    
T  12083620 catcttatatgagggaattcgatgtgaaaacgtatataga--tgattttgaagaatacatgtgttgttctcttcattcttttgagttttcaaacagactt 12083717  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||| | ||||| || |||| || |||| ||| || |||||||  |||||||||||| |||  |||||||| ||||||||||||| ||| |||||    
T  12083718 gcaaatttttacacaaagtatacgacacttcaattccgacattttcggcaaactttcaagaattaaatttaaatccaacatcatgataataccacat 12083814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 3925424 - 3925492
Alignment:
Q  170 tttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||    
T  3925424 tttaatcccaacattttgagcaaactttcaagaatataatttaaattcaacatcatgatgataccacat 3925492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 26926865 - 26927032
Alignment:
Q  58 agaattcgatgtgaaaacatatatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctaca 154  Q
    |||||||||||||||||| ||| ||  |||||||  ||||||||| ||||   |||||||| | ||||||| |||||||||   | ||||||||||||||    
T  26926865 agaattcgatgtgaaaacctatgta--gttgattatgtagaataaatgttgtgttctcttcgttcttttgacttttcaaaggatgctgcaaatctctaca 26926962  T
Q  155 ctaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatca 224  Q
    |||| ||||||| ||||  ||  |||| ||||  |||||||||||| ||| ||||||||| |||||||||    
T  26926963 ctaagtataagacacttcgatgtcaactttttccgcaaactttcaacaatttaatttaaatccaacatca 26927032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 45 - 195
Target Start/End: Original strand, 16886292 - 16886443
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggtt 141  Q
    ||||||||| ||  ||||||||||||||||| ||||||  |||||||||||| ||||  ||||   |||||||  | |||||||||||||||| ||  ||    
T  16886292 catcttatacaaaggaattcgatgtgaaaacctatata--gttgatttggtaaaatacatgttgtgttctctttattcttttgagttttcaaacagactt 16886389  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaact 195  Q
    ||||| || ||| |||| ||||||| |||| ||||||||||| || ||||||||    
T  16886390 gcaaacctttaccctaagtataagacacttcaataccaacatcttcagcaaact 16886443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 27317406 - 27317289
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||||||||||||||| | | ||||||||| || ||||| ||||||| |||| ||| || |||||||  ||||| |||||| ||| ||||||||| |||    
T  27317406 cttttgagttttcaaagggcgctgcaaatcttta-actaagtataagacacttcaatgccgacattttccgcaaagtttcaataatttaatttaaatcca 27317308  T
Q  219 acatcatgatgataacaca 237  Q
    |||| ||||||||| ||||    
T  27317307 acatgatgatgataccaca 27317289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 36338092 - 36337904
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata---agtgttttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| || |||||| |||||| ||| ||||||  |||| |||||| |||||   | ||| ||| |||| | ||||||||||||||||||| |||    
T  36338092 catcttatatgagggaattcaatgtgagaacctatata--gttggtttggttgaatacaaaatgtgttcacttcattcttttgagttttcaaagagagtt 36337995  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
     ||||| | |||||||| ||||||| |||||| | ||||||| |||| |||||   ||  ||| |||||| || ||||||||||| |||||    
T  36337994 acaaatttttacactaagtataagacactttagtgccaacatcttgaacaaacaaccatgaatttaattttaatccaacatcatgttgata 36337904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 11826559 - 11826675
Alignment:
Q  287 atgtaatgtaacgtagatgaaattaaaactaaataaaattacgtatttt--ttgaattgattttgtgtacttgtgcaactttattcgaatttattcaata 384  Q
    ||||||||||| || |||||||||||||||||||||||||  |||||||  || ||||| ||||||||| |||||  ||||||||| | |||||  ||||    
T  11826559 atgtaatgtaatgttgatgaaattaaaactaaataaaattgtgtatttttgtttaattggttttgtgtaattgtgtcactttattcaattttat--aata 11826656  T
Q  385 cacaacttttattcaaatt 403  Q
    | ||| |||||||| ||||    
T  11826657 cgcaatttttattcgaatt 11826675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 41935147 - 41935286
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaat--aag-tgttttctcttcctacttttga-gttttcaaagagggt 140  Q
    ||||||||| ||| |||||||||||||||||  |||||||||||||||||| ||||  ||| ||| |||||||| | ||||| |  ||||||| || | |    
T  41935147 catcttatacaagggaattcgatgtgaaaac--atatatagttgatttggttgaatacaagatgtgttctcttcattctttttactttttcaaggatgct 41935244  T
Q  141 tgcaaatctctacactaactataagatactttaataccaacat 183  Q
    | ||||||||||| |||| ||||||| ||||||||||||||||    
T  41935245 t-caaatctctacgctaagtataagacactttaataccaacat 41935286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 16651014 - 16650897
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaa 219  Q
    |||| |||||||||||||  |||||||| | |||||||  ||||||| |||| ||| ||||||||||   |||||||| |  ||| ||||||||| ||||    
T  16651014 ttttaagttttcaaagagacttgcaaatttttacactatgtataagacacttcaatgccaacattttttacaaactttaatgaat-taatttaaatccaa 16650916  T
Q  220 catcatgatgataacacat 238  Q
    ||||||||||||| |||||    
T  16650915 catcatgatgataccacat 16650897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 17625374 - 17625257
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaa 219  Q
    |||| |||||||||||||  |||||||| | |||||||  ||||||| |||| ||| ||||||||||   |||||||| |  ||| ||||||||| ||||    
T  17625374 ttttaagttttcaaagagacttgcaaatttttacactatgtataagacacttcaatgccaacattttttacaaactttaatgaat-taatttaaatccaa 17625276  T
Q  220 catcatgatgataacacat 238  Q
    ||||||||||||| |||||    
T  17625275 catcatgatgataccacat 17625257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 18150133 - 18150195
Alignment:
Q  264 atgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaatt 326  Q
    ||||||||  ||||||||| || |||||||||||||||||||||||||||| |||||| ||||    
T  18150133 atgataccctatatttaggaagaatgtaatgtaacgtagatgaaattaaaattaaatacaatt 18150195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 12309471 - 12309546
Alignment:
Q  121 tttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactt 196  Q
    ||||| |||| ||||||  |||||||||||||||| || ||||||| |||| |||||||||||| | |||||||||    
T  12309471 tttgacttttaaaagagtcttgcaaatctctacaccaagtataagacacttcaataccaacattctcagcaaactt 12309546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 403
Target Start/End: Complemental strand, 21613800 - 21613758
Alignment:
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  21613800 aactttattcgaatttattcaatacacaatttttattctaatt 21613758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 31267419 - 31267338
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaa 200  Q
    ||||||| |||||||||||| ||||||||| ||||| | | ||||||| |||| ||||||| ||| || |||||||| ||||    
T  31267419 cttttgacttttcaaagaggcttgcaaatcactacaatcagtataagaaacttcaataccatcatcttcagcaaactatcaa 31267338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 27317684 - 27317748
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacat 183  Q
    ||||||| |||||||||||||| |||||||| |||| | |  |||||| ||||||||||||||||    
T  27317684 cttttgacttttcaaagagggtagcaaatctttacattcatgataagacactttaataccaacat 27317748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 199
Target Start/End: Complemental strand, 7067071 - 7066920
Alignment:
Q  49 ttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata--agt-gttttctcttcctacttttgagttttcaaagagggttgcaa 145  Q
    ||||| ||| |||| | |||||||||||||||||  |||||||||||| ||||  ||| || |||||||| | ||||||| |||||||||   | |||||    
T  7067071 ttatacaagggaatactatgtgaaaacatatata--gttgatttggtaaaatacaagttgtgttctcttcattcttttgacttttcaaaggatgctgcaa 7066974  T
Q  146 atctctacactaactataagatactttaataccaacattttgagcaaactttca 199  Q
    |||| ||| |  | ||||| | |||||||||||||||| |  ||||||||||||    
T  7066973 atctttacgcctagtataacacactttaataccaacatctgtagcaaactttca 7066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 565
Target Start/End: Original strand, 4230611 - 4230669
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgcttttagatgcgaatcaaaata 565  Q
    ||||||||||||||||||||| |  ||||||||||||||||| | || | |||||||||    
T  4230611 tcaattgggttgtcctcgacagtccctggggcacctgcttttggttgaggatcaaaata 4230669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 297
Target Start/End: Complemental strand, 9651865 - 9651831
Alignment:
Q  263 gatgataccacatatttagggaggatgtaatgtaa 297  Q
    ||||||||||||||||||||||| |||||||||||    
T  9651865 gatgataccacatatttagggagaatgtaatgtaa 9651831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Original strand, 17184338 - 17184379
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  17184338 tcaattgggttgtcctcgacaatccatggggcacctgctttt 17184379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 43350463 - 43350422
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  43350463 tcaattgggttgtcctcgacagtccctggggcacctgctttt 43350422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 261 - 420
Target Start/End: Original strand, 26140891 - 26141049
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |    
T  26140891 atgatgataccacatatttagggagaatgtaatgtaacttagatgaaattaaaactaaataaaattgtgtattttttgaattgatttcgtgtacttgtac 26140990  T
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatttattcaataccaaaatg 420  Q
    || |||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  26140991 aattttattcgaatttattcaatacgcaac-tttattcaaatttattcaatatcaaaatg 26141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 46 - 232
Target Start/End: Complemental strand, 24629573 - 24629384
Alignment:
Q  46 atcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata--agtgtt---ttctcttcctacttttgagttttcaaagagggt 140  Q
    ||||||||| || |||||| |||||||||  |||||||||||||||||||||||||  ||||||   ||||||||   ||||||||| || ||||   |     
T  24629573 atcttatatgagggaattccatgtgaaaa--tatatatagttgatttggtagaatacaagtgttgtgttctcttcactcttttgagtgtttaaaggatgc 24629476  T
Q  141 tgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  24629475 tgcaaatctctacactaagtataagacactttaataccaacattttgagcaaactttcaagaatataatttaaacccagcgtcatgatgata 24629384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 261 - 413
Target Start/End: Complemental strand, 24629392 - 24629241
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||||||| ||| |||||||| || |||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||     
T  24629392 atgatgatatcacgtatttaggaagaatgtaatgtaacatagatgaaattaaaactaaataaaattgtgtattttttgaattaatttcgtgtacttgtga 24629293  T
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    ||||||||||||||||||| ||||| ||| ||||| | | |||||||||||||    
T  24629292 aactttattcgaatttatttaatacgcaa-ttttagttacatttattcaatac 24629241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 261 - 393
Target Start/End: Original strand, 10205320 - 10205449
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||||||||     |||||||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  10205320 atgatgataccacatatatttagggagaatgtaatgta-----gatgaaattaaaactaaataaaattgtgtatttgttgaattgattttgtgtacttgt 10205414  T
Q  359 gcaactttattcgaatttattcaatacacaacttt 393  Q
    |||||||||||| |||||||||||||| |||||||    
T  10205415 gcaactttattcaaatttattcaatacgcaacttt 10205449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 61 - 238
Target Start/End: Original strand, 10205154 - 10205334
Alignment:
Q  61 attcgatgtgaaaacatatatatagttgatttggtagaata--agtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacac 155  Q
    ||||||||||||||||||||||  |||||||||||||||||  ||||||   |||||||| | ||||||||||||||||  |   | |||||| ||||      
T  10205154 attcgatgtgaaaacatatata--gttgatttggtagaatactagtgttgtgttctcttcattcttttgagttttcaaaaggcacttcaaatcactacgt 10205251  T
Q  156 taactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    ||| | ||||| | || |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  10205252 taagtgtaagacagttcaataccaacattttgagcaaactttcaagaatttaatttaaacccaacatcatgatgataccacat 10205334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 12504327 - 12504201
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| |||| |||||| ||||||||||||||||||||||||||||  |||||||||||||||||         ||||    
T  12504327 atgatgataccacatatatttagggagaatgttatgtaatgtagatgaaattaaaactaaataaaattgtgtattttttgaattgat--------attgt 12504236  T
Q  359 gcaactttattcgaatttattcaatacacaacttt 393  Q
    |||||||||||||||||||||||||||||||||||    
T  12504235 gcaactttattcgaatttattcaatacacaacttt 12504201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 360 - 652
Target Start/End: Original strand, 27784356 - 27784650
Alignment:
Q  360 caactttattcgaatttattcaatacacaacttttattcaaatttattcaataccaaaatgtgcaacatatcaaaaat-cat-taaaaaacatccgaaca 457  Q
    ||||||||||  ||||||||||| |||||||||| |||||||||||||||||| ||||||| || ||||||||||||  ||| ||||||| |||| |  |    
T  27784356 caactttattaaaatttattcaaaacacaacttt-attcaaatttattcaatagcaaaatgcgcgacatatcaaaaaaacatataaaaaaaatccaacaa 27784454  T
Q  458 accaagacattttaagtcattatattga-tcaactccctcaccacttaattcaattgggttgtcctcgacaatttctggggcacctgcttttagatgcga 556  Q
    |  |||||||| |||| ||||| ||| | |||  ||||||| ||| ||| |||||||||||||  || ||| || ||||||||||||||||| | || |     
T  27784455 atgaagacattataagccattacatttaatcatttccctcatcacataagtcaattgggttgttatcaacagttcctggggcacctgcttttggctgtgg 27784554  T
Q  557 atcaaaataacaggttcttcctcttcgtcccgtcttgttgaaattgtacacgggcatattcaccttacttttttgtctggttccttcacatttgat 652  Q
    | |||||||||  |||||||  || ||||   | |||| |||||||||||| |||| |||| |||| |||||||||| | |||||| |||||||||    
T  27784555 accaaaataacctgttcttctgctccgtcttattttgtagaaattgtacacaggcacattcgccttgcttttttgtccgattcctttacatttgat 27784650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 27784184 - 27784300
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||||||||||||| |||||||||||  ||| ||||||||||||||||||| ||| ||    
T  27784184 atgatgataccacatatatttagggagaatgtaatgtaatgtagatgaaattaaaattaaataaaattgtgta-tttttgaattgattttgtgcactggt 27784282  T
Q  359 gcaactttattcgaattt 376  Q
    ||||||||||| ||||||    
T  27784283 gcaactttatttgaattt 27784300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 261 - 359
Target Start/End: Complemental strand, 22842779 - 22842676
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaat-----gtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtact 355  Q
    ||||||||||||||||||||||||| |||||||     |||||||||||||||| ||||||||||||||||  |||||||| ||||||||||  ||||||    
T  22842779 atgatgataccacatatttagggagaatgtaatgtaatgtaacgtagatgaaatcaaaactaaataaaattgtgtatttttggaattgatttcatgtact 22842680  T
Q  356 tgtg 359  Q
    ||||    
T  22842679 tgtg 22842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 22842884 - 22842765
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    |||||||||||| ||||||  |||||||| | || ||||| |||||||||||| ||| ||||||||||  ||||| |||||| ||| |||||| ||||||    
T  22842884 cttttgagttttgaaagagacttgcaaatttttatactaagtataagatacttcaatgccaacattttcggcaaaatttcaagaatttaatttgaaccca 22842785  T
Q  219 acatcatgatgataacacat 238  Q
    |||||||||||||| |||||    
T  22842784 acatcatgatgataccacat 22842765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 26140775 - 26140905
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||||| |||||||||   | ||| ||||||||  | || ||||||| |||| ||| || | |||||  |||||||||||| ||||||    
T  26140775 ttctcttcattcttttgaattttcaaaggaagctgctaatctctatccaaagtataagacacttcaatgcctatattttcggcaaactttcaagaatata 26140874  T
Q  208 atttaaacccaacatcatgatgataacacat 238  Q
    ||||||||||||||||||||||||| |||||    
T  26140875 atttaaacccaacatcatgatgataccacat 26140905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 32108541 - 32108353
Alignment:
Q  44 ccatcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaat---aagtgttttctcttcctacttttgagttttcaaagagggt 140  Q
    ||||||||||| || |||||||||| || |||  ||||||||||||||| ||| |||   || ||| ||| |||| | ||||| || ||||||||||  |    
T  32108541 ccatcttatatgagggaattcgatgagagaac--atatatagttgatttagtataatacaaaatgtgttcacttcattcttttaag-tttcaaagagact 32108445  T
Q  141 tgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    ||||||| | |||||||| ||||| | |||||||| ||||||||||||||||||   ||  ||| |||||| || |||||||||||||||||    
T  32108444 tgcaaatttttacactaagtataaaacactttaatgccaacattttgagcaaacaaccatgaatttaattttaatccaacatcatgatgata 32108353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 16093452 - 16093525
Alignment:
Q  329 gtattttttgaattgattttgtgtacttgtgcaactttattcga----atttattcaatacacaacttttattc 398  Q
    ||||||||| ||||||||||||||| |||||  |||||||||||    ||||||||||||||||||||||||||    
T  16093452 gtatttttttaattgattttgtgtaattgtgtcactttattcgaatttatttattcaatacacaacttttattc 16093525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 24629717 - 24629855
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata--agt-gttttctcttcctacttttgagttttcaaagagggtt 141  Q
    ||||||||| |||| |||||||||| ||||  ||||||||||  |||||||| ||||  ||| ||||| ||||  | ||||||| |||||||||||  ||    
T  24629717 catcttatacaagaaaattcgatgtaaaaa--tatatatagtatatttggtaaaatacaagttgttttttcttatt-cttttgacttttcaaagagtctt 24629813  T
Q  142 gcaaatctctacactaactataagatactttaataccaacat 183  Q
    |||||||| ||| ||||  |||||| ||||||||||||||||    
T  24629814 gcaaatctttacgctaagcataagacactttaataccaacat 24629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 27784111 - 27784198
Alignment:
Q  151 tacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||||| ||||||| |||| ||| |  |||||||  |||||||||||| ||| ||||||||| |||| |||||||||||| |||||    
T  27784111 tacactaaatataagacacttcaatgctgacattttccgcaaactttcaacaatttaatttaaatccaatatcatgatgataccacat 27784198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 436
Target Start/End: Complemental strand, 24629253 - 24629191
Alignment:
Q  373 atttattcaatacacaacttttattcaaatttattcaataccaaaatgtgcaacatatcaaaaa 436  Q
    ||||||||||||| ||||||| ||| ||||||||||||||| |||||  |||||||||| ||||    
T  24629253 atttattcaatacgcaacttt-atttaaatttattcaatacgaaaatacgcaacatatccaaaa 24629191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 12784761 - 12784676
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaa 193  Q
    |||||||| | |||||||||||| ||| ||  |||||||| | ||||| || ||||||| ||| |||| |||||||||| ||||||    
T  12784761 ttctcttcattcttttgagttttgaaaaagacttgcaaatttttacaccaagtataagacactataatgccaacatttttagcaaa 12784676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 5e-52; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 261 - 413
Target Start/End: Complemental strand, 21864295 - 21864144
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  21864295 atgattataccacatatttagggagaatgtaatttaatgtagatgaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtatttgtgc 21864196  T
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  21864195 aactttattcgaatttattcaatacacaac-tttaataaaatttattcaatac 21864144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 24560585 - 24560706
Alignment:
Q  287 atgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatttattcaataca 386  Q
    |||||||||||| ||| |||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||    
T  24560585 atgtaatgtaacataggtgaaattaaaactaaataaaattgtgtattttttaaattgtttttgtgtacttgtgcaactttattcgaatttattcaaaaca 24560684  T
Q  387 caacttttattcaaatttattca 409  Q
    |||| ||||||||||||||||||    
T  24560685 caac-tttattcaaatttattca 24560706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 261 - 393
Target Start/End: Original strand, 14096371 - 14096505
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  ||||  || || |||||||| ||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  14096371 atgatgataccacatatatttagcaagaatataatgtaatgtagatgaaattaaaatgaaataaaattgtgtattttttgaattgattttgtgtacttgt 14096470  T
Q  359 gcaactttattcgaatttattcaatacacaacttt 393  Q
    ||||||||| |||||||||||||||||||||||||    
T  14096471 gcaactttagtcgaatttattcaatacacaacttt 14096505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 30764427 - 30764293
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||| | | ||||||||| || |||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  30764427 atgatgataccacatatatttagggggaacgtaatgtaatgttgatgaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtatttgt 30764328  T
Q  359 gcaactttattcgaatttattcaatacacaacttt 393  Q
    ||||||||| |||||||||| |||||| |||||||    
T  30764327 gcaactttaatcgaatttatgcaatacgcaacttt 30764293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 261 - 393
Target Start/End: Original strand, 33201115 - 33201249
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| || |||||||| ||||||||||||||||||||||||||||   |||||||  | ||||||||||||| ||||    
T  33201115 atgatgataccacatatatttagggagaatataatgtaatgtagatgaaattaaaactaaataaaattgtctatttttaaatttgattttgtgtatttgt 33201214  T
Q  359 gcaactttattcgaatttattcaatacacaacttt 393  Q
    |||| |||| |||||||||||||||||||||||||    
T  33201215 gcaattttaatcgaatttattcaatacacaacttt 33201249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 20244745 - 20244941
Alignment:
Q  49 ttatataagagaattcgatgtgaaaac--atatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||| || ||||||||||| | |||  ||||||||||||||||||||| ||||   |||||   |||||||| | ||| |||||||||||||||   |    
T  20244745 ttatatgagggaattcgatgtaagaacttatatatatagttgatttggtataatacatgtgttgtgttctcttcattcttctgagttttcaaagagacgt 20244844  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||| |||||||||| ||||||| ||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||| ||| |||||    
T  20244845 gcaaatttctacactaaatataagacactgtaataccaatatttttagcaaactttcaagaatttaatttaaacccaacatcatgatcataccacat 20244941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 22138729 - 22138925
Alignment:
Q  49 ttatataagagaattcgatgtgaaaac--atatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||| || ||||||||||| | |||  ||||||||||||||||||||| ||||   |||||   |||||||| | ||| |||||||||||||||   |    
T  22138729 ttatatgagggaattcgatgtaagaacttatatatatagttgatttggtataatacatgtgttgtgttctcttcattcttctgagttttcaaagagacgt 22138828  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||| |||||||||| ||||||| ||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||| ||| |||||    
T  22138829 gcaaatttctacactaaatataagacactgtaataccaatatttttagcaaactttcaagaatttaatttaaacccaacatcatgatcataccacat 22138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 18743448 - 18743328
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||||||||| ||||||||||||||| ||||||||||||  |||||| || ||||||||||||||| ||||    
T  18743448 atgatgataccacatatatttagggagaatgtaatgtaatgtagatgaaattaaatctaaataaaattgggtatttgtttaattgattttgtgtaattgt 18743349  T
Q  359 gcaactttattcgaatttatt 379  Q
    |  ||||||||||||||||||    
T  18743348 gtcactttattcgaatttatt 18743328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 20244927 - 20245052
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||| ||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||  ||| |||||||    
T  20244927 atgatcataccacatatttggggaaaaattaatgtaacgtagatgaaattaaaactaaataaaattgtgtatttattgaattgatttcatgtgcttgtgc 20245026  T
Q  361 aactttattcgaatttattcaataca 386  Q
    |||||||||| | |||||||||||||    
T  20245027 aactttattcaagtttattcaataca 20245052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 22138911 - 22139036
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||| ||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||  ||| |||||||    
T  22138911 atgatcataccacatatttggggaaaaattaatgtaacgtagatgaaattaaaactaaataaaattgtgtatttattgaattgatttcatgtgcttgtgc 22139010  T
Q  361 aactttattcgaatttattcaataca 386  Q
    |||||||||| | |||||||||||||    
T  22139011 aactttattcaagtttattcaataca 22139036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 3096965 - 3096849
Alignment:
Q  291 aatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatt----tattcaataca 386  Q
    ||||||| |||||||||||||||||||||||||| || ||||| ||| |||||||||||| ||||||||  ||||||||||||||    |||| ||||||    
T  3096965 aatgtaatgtagatgaaattaaaactaaataaaactatgtattgttttaattgattttgtatacttgtgtcactttattcgaatttatttattgaataca 3096866  T
Q  387 caacttttattcaaatt 403  Q
    |||||||||||||||||    
T  3096865 caacttttattcaaatt 3096849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 2402731 - 2402836
Alignment:
Q  274 atatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaa 373  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||||||||||  ||||||||| ||||||||||||||| |||||  ||||||||| ||    
T  2402731 atatttagggagaatggaatgtaatgtagatcaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtaattgtgtcactttattcaaa 2402830  T
Q  374 tttatt 379  Q
    ||||||    
T  2402831 tttatt 2402836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 33200928 - 33201129
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatata--tagttgatttggtagaata--agtgtt---ttctcttcctacttttgagttttcaaagag 137  Q
    |||||||||| || |||||| |||| ||||  ||||||  || || |||||||||||||  ||||||   |||||||  | |||||||||||||| || |    
T  33200928 catcttatatgagggaattctatgtcaaaatttatatagttaattaatttggtagaatacaagtgttgtgttctcttaattcttttgagttttcacaggg 33201027  T
Q  138 g-gttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacac 236  Q
    | | ||||| ||  ||| |||| ||||| | |||||||| |||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||| |||    
T  33201028 gcgctgcaagtcaatacgctaagtataatacactttaatcccaacattttaagcaaattttcaataatttaatttaaacccaacatcatgatgataccac 33201127  T
Q  237 at 238  Q
    ||    
T  33201128 at 33201129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 238
Target Start/End: Complemental strand, 30764575 - 30764413
Alignment:
Q  79 tatatagttgatttggtagaataa--gtgtt-ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaat 175  Q
    |||||||||||||| ||||||||   ||||| |||||||| | ||||||| ||||||||| | | || ||||| || | |||| | ||||| |||| |||    
T  30764575 tatatagttgattttgtagaatacatgtgttgttctcttcattcttttgacttttcaaagggcgctgaaaatcactgcgctaagtgtaagacacttcaat 30764476  T
Q  176 accaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
     ||||||||||  |||||||||||| |||  |||||||| ||||||| ||||||||| |||||    
T  30764475 gccaacatttttggcaaactttcaagaattaaatttaaatccaacattatgatgataccacat 30764413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 5972621 - 5972517
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||||||||||||||  | | || |||||| |||||| | ||||||| |||||||| || | |||||  |||||||||||| ||| |||||||||||||    
T  5972621 cttttgagttttcaaatggtgctgtaaatctttacacttagtataagacactttaatgccgatatttttcgcaaactttcaacaatttaatttaaaccca 5972522  T
Q  219 acatc 223  Q
    |||||    
T  5972521 acatc 5972517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 18743535 - 18743451
Alignment:
Q  141 tgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcat 225  Q
    |||||||| |||  |||| || |||| |||| ||||||||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  18743535 tgcaaatcactatgctaagtacaagacacttcaataccaacattttgtgcaaactttgaataatttaatttaaacccaacatcat 18743451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 3097097 - 3096978
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||||| |||||||||| ||||| |||||||||| | || ||||  | |||| ||| ||||||||||  ||||| |||||| |||  ||||| || |||    
T  3097097 cttttgacttttcaaagaaggttgtaaatctctacccgaagtatacaacacttcaatgccaacatttttggcaaaatttcaagaattaaatttcaatcca 3096998  T
Q  219 acatcatgatgataacacat 238  Q
    |||||||||||||| |||||    
T  3096997 acatcatgatgataccacat 3096978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 24560217 - 24560080
Alignment:
Q  59 gaattcgatgtgaaaacatatatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacac 155  Q
    ||||||||||||||||| ||||||  |||||||||||| ||||  ||||   |||||||| | |||||||||||| ||| ||  ||||||| || ||  |    
T  24560217 gaattcgatgtgaaaacctatata--gttgatttggtaaaatacatgttgtgttctcttcattcttttgagttttgaaaaagacttgcaaacctttatcc 24560120  T
Q  156 taactataagatactttaataccaacattttgagcaaact 195  Q
    ||| ||||||| |||| ||||||||||| || ||||||||    
T  24560119 taagtataagacacttcaataccaacatattcagcaaact 24560080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 19243451 - 19243511
Alignment:
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaa 200  Q
    |||||||| | ||||| || |||||||  ||||||||||||||||||||||||||||||||    
T  19243451 ttgcaaatttttacaccaagtataagacgctttaataccaacattttgagcaaactttcaa 19243511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 359 - 403
Target Start/End: Original strand, 23911628 - 23911672
Alignment:
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  23911628 gcaactttattcgaatttattcaatacacaatttttattcgaatt 23911672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 3386298 - 3386417
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    |||||||||||||||||||  |||||||| | |||||||| ||||||| |||| |||  ||| |||||    |||||||||  ||| ||| ||||| |||    
T  3386298 cttttgagttttcaaagagacttgcaaatttttacactaaatataagacacttcaatgacaatattttcgataaactttcatgaatttaaattaaatcca 3386397  T
Q  219 acatcatgatgataacacat 238  Q
    | |||||||||||| |||||    
T  3386398 atatcatgatgataccacat 3386417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 8711514 - 8711617
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaa 219  Q
    |||||||||||||||  | | || |||||| || ||| | ||||||| |||||||| || | |||||  |||||||||||| ||| ||||||||||||||    
T  8711514 ttttgagttttcaaatggtgctgtaaatctttatacttagtataagacactttaatgccgatatttttcgcaaactttcaacaatttaatttaaacccaa 8711613  T
Q  220 catc 223  Q
    ||||    
T  8711614 catc 8711617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 196
Target Start/End: Complemental strand, 19243178 - 19243058
Alignment:
Q  79 tatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaat 175  Q
    |||||| ||||||||||| ||||  ||||   |||||||  | |||||||||||||||| ||  ||||||| || |||||||| |||| || ||||||||    
T  19243178 tatataattgatttggtaaaatacatgttgtgttctctttattcttttgagttttcaaatagtcttgcaaacctttacactaagtatatgacactttaat 19243079  T
Q  176 accaacattttgagcaaactt 196  Q
    |||| |||| | |||||||||    
T  19243078 accatcattcttagcaaactt 19243058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 14096272 - 14096385
Alignment:
Q  125 agttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatca 224  Q
    ||||||||||| | | || ||| || |||||||| ||||||| |||| ||| || |||| || || |||||||||| ||| |||||||||  |||| |||    
T  14096272 agttttcaaagggcgctgtaaacctttacactaagtataagacacttaaatgccgacatattcagtaaactttcaacaatttaatttaaattcaacgtca 14096371  T
Q  225 tgatgataacacat 238  Q
    |||||||| |||||    
T  14096372 tgatgataccacat 14096385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 22962087 - 22961899
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata---agtgttttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| |||||||||||||||| ||| ||||||  ||| ||||| || ||||   | ||| ||||||   | ||||||||||||| ||||   ||    
T  22962087 catcttatatgagagaattcgatgtgagaacctatata--gtttatttgatataatacaaaatgtgttctctatattcttttgagttttcgaagatactt 22961990  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    |||| | | |||| ||| |||||| ||||||||| |||||||||| || ||||   ||  ||| |||||| || |||||||||||||||||    
T  22961989 gcaattttttacaataagtataaggtactttaatgccaacatttttagaaaacaaccatgaatttaattttaatccaacatcatgatgata 22961899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 232
Target Start/End: Original strand, 23826306 - 23826494
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata---agtgttttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| |||||||||||||||| ||| ||||||  ||| ||||| || ||||   | ||| ||||||   | ||||||||||||| ||||   ||    
T  23826306 catcttatatgagagaattcgatgtgagaacctatata--gtttatttgatataatacaaaatgtgttctctatattcttttgagttttcgaagatactt 23826403  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    |||| | | |||| ||| |||||| ||||||||| |||||||||| || ||||   ||  ||| |||||| || |||||||||||||||||    
T  23826404 gcaattttttacaataagtataaggtactttaatgccaacatttttagaaaacaaccatgaatttaattttaatccaacatcatgatgata 23826494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 24560472 - 24560564
Alignment:
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    |||||||| | |||||||| ||||||| |||| ||| | ||||||||   ||| ||||| ||||| ||||| ||| |||||||||||||||||    
T  24560472 ttgcaaatttttacactaagtataagacacttcaatgcaaacattttcgacaacctttccaaaatttaattgaaatccaacatcatgatgata 24560564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 802008 - 802047
Alignment:
Q  287 atgtaatgtaacgtagatgaaattaaaactaaataaaatt 326  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  802008 atgtaatgtaacgtacatgaaattataactaaataaaatt 802047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 11117271 - 11117197
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaac 194  Q
    ||||||| |||||| ||||  |||||||| | |||||||| |||||||||||||||| |||||| |||||| ||||    
T  11117271 cttttgaattttcatagagacttgcaaattt-tacactaagtataagatactttaatgccaacactttgagaaaac 11117197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 403
Target Start/End: Complemental strand, 14482343 - 14482300
Alignment:
Q  360 caactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||    
T  14482343 caactttattcgaatttatttaatacacaatttttattcgaatt 14482300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 2402685 - 2402730
Alignment:
Q  193 actttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||||| ||| |||||||||||||||||||||| |||| |||||    
T  2402685 actttcaataatttaatttaaacccaacatcatgaagataccacat 2402730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 21863987 - 21863946
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||||||||||||||||||| | |||||||||| |||||||    
T  21863987 tcaattgggttgtcctcgacagtctctggggcacatgctttt 21863946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 648
Target Start/End: Original strand, 24560859 - 24560948
Alignment:
Q  559 caaaataacaggttcttcctcttcgtcccgtcttgttgaaattgtacacgggcatattcaccttacttttttgtctggttccttcacatt 648  Q
    |||||||||||||  |||| || |||| | ||||||||||||||||||||  || | |  |||| |||||||||| || |||||||||||    
T  24560859 caaaataacaggtcattccactccgtctcatcttgttgaaattgtacacgaacacactagccttgcttttttgtccggatccttcacatt 24560948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 30764219 - 30764167
Alignment:
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatttattcaata 412  Q
    ||||||||| ||||||||||||||||| |||| |||| || |||||||||||||    
T  30764219 gcaactttaatcgaatttattcaatacgcaac-tttaatcgaatttattcaata 30764167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 30764245 - 30764193
Alignment:
Q  360 caactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    |||||||| ||||||||||||||||| |||| |||| || ||||||||||||||    
T  30764245 caactttaatcgaatttattcaatacgcaac-tttaatcgaatttattcaatac 30764193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 2e-51; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 261 - 413
Target Start/End: Complemental strand, 11788627 - 11788474
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  ||| |||  ||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||    
T  11788627 atgatgataccacatatatttaaggaaaatgtaatgtaatgtagatgaaattaaaactaaataaaattgtgtattttttaaattgattttgcgtacttgt 11788528  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11788527 gcaactttattcgaatttattcaatacacaactttt-ttcaaatttattcaatac 11788474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 19261878 - 19261752
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||| ||||    
T  19261878 atgatgataccacatatatttagggagaatgtaatgtaatgtagatgaaattaaaactaaataaaattgtgtattgttttaattgattttgtgtaattgt 19261779  T
Q  359 gcaactttattcgaatttattcaatac 385  Q
    |  ||||||||||||||||||||||||    
T  19261778 gtcactttattcgaatttattcaatac 19261752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 261 - 403
Target Start/End: Complemental strand, 22923222 - 22923080
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||| ||| ||||||||||| |||||| |||||||||||||||||||||   || ||||| ||||||||||||||||||||    
T  22923222 atgatgataccacatatatttagtgag-atgtaatgtaatgtagataaaattaaaactaaataaaattgtttaattttttaattgattttgtgtacttgt 22923124  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||    
T  22923123 gcaactttaatcgaatttattcaatacacaa-ttttattcgaatt 22923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 261 - 403
Target Start/End: Complemental strand, 27574701 - 27574558
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| || |||||||| ||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||| ||||    
T  27574701 atgatgataccacatatatttagggagaatttaatgtaatgtagatgaaatcaaaactaaataaacttatgtagttttttaattgattttgtgtatttgt 27574602  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    || ||||||||| |||||||| ||||||||| |||||||| ||||    
T  27574601 gccactttattcaaatttattgaatacacaa-ttttattcgaatt 27574558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 263 - 403
Target Start/End: Original strand, 15472176 - 15472317
Alignment:
Q  263 gatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    |||||||||||||||  |||||||| ||||| || || |||||||||||||||| |||||||||||  ||||||||| |||||||| |||||| ||||||    
T  15472176 gatgataccacatatatttagggagaatgtagtgcaatgtagatgaaattaaaaataaataaaattgtgtatttttttaattgattctgtgtaattgtgc 15472275  T
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
     || ||||||||||||||||||||||||| |||||||| ||||    
T  15472276 cacgttattcgaatttattcaatacacaa-ttttattcgaatt 15472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 48706372 - 48706270
Alignment:
Q  261 atgatgatacca-catatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtg 359  Q
    |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||    
T  48706372 atgatgataccaacatatttagggagaatgtaatgtaacataaatgaaattaaaactaaataaaattctgtattttttgaattggtttcgtgtacttgtg 48706273  T
Q  360 caa 362  Q
    |||    
T  48706272 caa 48706270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 27259864 - 27260034
Alignment:
Q  61 attcgatgtgaaaacatatatatagttgatttggtagaataagt--gtt-ttctcttcctacttttgagttttcaaagagggttgcaaatctctacacta 157  Q
    ||||||||||||||||||||||  |||||||  ||||||||  |  ||| |||||||| | |||||||||||||||||   ||||||||| |||||||||    
T  27259864 attcgatgtgaaaacatatata--gttgattatgtagaatacatttgttgttctcttcattcttttgagttttcaaaggatgttgcaaatatctacacta 27259961  T
Q  158 actataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatga 230  Q
    | ||||||| |||| ||||| ||| ||||  | |||||||||| ||| ||||||||| |||||||||||||||    
T  27259962 agtataagacacttcaatactaactttttccgtaaactttcaacaatttaatttaaatccaacatcatgatga 27260034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 22923338 - 22923208
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||||| ||||||||||   ||||||||||||   | || ||||||| |||||||||||||||||||  ||||||||||||||||  |    
T  22923338 ttctcttcattcttttgaattttcaaagaaatttgcaaatctctgttcaaagtataagacactttaataccaacatttttcgcaaactttcaaaaattaa 22923239  T
Q  208 atttaaacccaacatcatgatgataacacat 238  Q
    | ||||| | ||||||||||||||| |||||    
T  22923238 acttaaatcgaacatcatgatgataccacat 22923208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 27574881 - 27574687
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt-ttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| |||||||||||||||||||| |||| |  ||||||||| |||||||   ||||| |||||||| | ||||||| ||||||||||  | |    
T  27574881 catcttatatgagagaattcgatgtgaaaacctataaa--gttgatttgctagaatacatgtgttgttctcttcattcttttgacttttcaaagaaagat 27574784  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||||||||| | || |||| || |||| ||| |||| ||||| || ||||||  ||||||  || ||||| ||||||| ||||||||| |||||    
T  27574783 gcaaatctctacccgaattatacgacacttcaatgccaagattttcagtaaacttctaaaaattaaacttaaatccaacattatgatgataccacat 27574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 19261982 - 19261864
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaacttt-caaaaatataatttaaaccca 218  Q
    ||||||||||||||| ||  |||||||| |||||| ||| |||| || |||| ||| || |||||||  ||||||||| || ||||| |||||||| |||    
T  19261982 ttttgagttttcaaacagacttgcaaatttctacattaagtatacgacacttcaattccgacattttcggcaaactttccagaaata-aatttaaatcca 19261884  T
Q  219 acatcatgatgataacacat 238  Q
    |||||||||||||| |||||    
T  19261883 acatcatgatgataccacat 19261864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 238
Target Start/End: Original strand, 27800253 - 27800414
Alignment:
Q  78 atatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatacttt 172  Q
    |||||||||||||| |||||||||   |||||   |||||||| | ||||||| |||| ||||||  ||||||||   || ||||| ||||||| ||||     
T  27800253 atatatagttgattcggtagaatacatgtgttgtattctcttcattcttttgaattttgaaagagacttgcaaat---tatactaagtataagacacttc 27800349  T
Q  173 aataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    ||| || ||||||   |||||||||||| ||| ||||||||| ||||||||| ||||||| |||||    
T  27800350 aatgccgacatttcc-gcaaactttcaagaatttaatttaaatccaacatcacgatgataccacat 27800414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 548
Target Start/End: Original strand, 23343655 - 23343696
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  23343655 tcaattgggttgtcctcgacaatccctggggcacctgctttt 23343696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 48706405 - 48706364
Alignment:
Q  191 aaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    ||||||| || |||||||||||||||||||||||||||||||    
T  48706405 aaactttgaagaatataatttaaacccaacatcatgatgata 48706364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 11789011 - 11789075
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacat 183  Q
    ||||||| |||||||||||| ||||||||| ||||| | | ||||||| |||| |||||||||||    
T  11789011 cttttgacttttcaaagaggcttgcaaatcactacattcagtataagacacttcaataccaacat 11789075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 21760253 - 21760317
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacat 183  Q
    ||||||| |||||||||||| |||||||||| |||| | | ||||||| |||| |||||||||||    
T  21760253 cttttgacttttcaaagaggcttgcaaatctttacattcaatataagacacttcaataccaacat 21760317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 39899722 - 39899828
Alignment:
Q  80 atatagttgatttggtagaata---agtgttttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaata 176  Q
    ||||||||||||| ||| ||||   | ||| |||||||| | |||||||||||||||||||  ||||||| || |||||||| ||||| | |||| ||||    
T  39899722 atatagttgattttgtataatacaaaatgtgttctcttcattcttttgagttttcaaagagacttgcaaacctttacactaagtataaaacacttcaata 39899821  T
Q  177 ccaacat 183  Q
     ||||||    
T  39899822 tcaacat 39899828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 19262267 - 19262354
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaact 195  Q
    |||||||| | |||||||||||||||| |   ||||||| || ||| |||| ||||||| |||| ||||||||||| || ||||||||    
T  19262267 ttctcttcattcttttgagttttcaaacaaacttgcaaacctttaccctaagtataagacacttcaataccaacatctttagcaaact 19262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 27260028 - 27260090
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaa 323  Q
    ||||||| || | ||||||||||   |||||||||||||||||||||||||||| || |||||    
T  27260028 atgatgacacaatatatttaggggaaatgtaatgtaacgtagatgaaattaaaattatataaa 27260090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 393
Target Start/End: Original strand, 5766252 - 5766281
Alignment:
Q  364 tttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||||||||||||||||||||||    
T  5766252 tttattcgaatttattcaatacacaacttt 5766281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 11788499 - 11788447
Alignment:
Q  360 caactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    ||||||| ||| ||||||||||||||  |||||| |||||||||||||||||||    
T  11788499 caacttttttcaaatttattcaatacgtaacttt-attcaaatttattcaatac 11788447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 16279088 - 16279038
Alignment:
Q  49 ttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata 101  Q
    |||||| || ||||||||||||||||| ||||||  |||||||||||||||||    
T  16279088 ttatattagggaattcgatgtgaaaacctatata--gttgatttggtagaata 16279038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 19261573 - 19261532
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||    
T  19261573 tcaattgggttgtccacgacaatctctggggcatctgctttt 19261532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 35585974 - 35585933
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  35585974 tcaattgggttgtcctcgacagtccctggggcacctgctttt 35585933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 36321528 - 36321589
Alignment:
Q  151 tacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataattta 212  Q
    |||||||| |||||||||||| ||| ||||||||||  |||||||||||  ||| |||||||    
T  36321528 tacactaaatataagatacttgaatgccaacattttcggcaaactttcatgaatttaattta 36321589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Original strand, 37779284 - 37779325
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  37779284 tcaattgggttgtcctcgacagtccctggggcacctgctttt 37779325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 261 - 392
Target Start/End: Original strand, 10976825 - 10976956
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||||||| ||    
T  10976825 atgatgataccacatatttagggagaatgtagtgtaacgtagatgaaattaaaactaaataaaattgtgtatttttttaattgatttcgtgtacttgcgc 10976924  T
Q  361 aactttattcgaatttattcaatacacaactt 392  Q
    |||||||||||||||||||||| |||||||||    
T  10976925 aactttattcgaatttattcaacacacaactt 10976956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 31488725 - 31488854
Alignment:
Q  264 atgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaac 363  Q
    |||||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  31488725 atgataccacatatttagggagaatgtaatgaaatttagatgaaattaaaactaaataaaattgtgtattttttgaattgattttgtttacttgtgcaac 31488824  T
Q  364 tttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||| ||||||||||| ||||||    
T  31488825 tttattcgaatgtattcaatacaaaacttt 31488854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 382
Target Start/End: Complemental strand, 6998486 - 6998365
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgc 360  Q
    ||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |    
T  6998486 atgatgataccgcataattaggaagagtgtaatgtaacgtagatgaaattaaaactaaataaaattgtgtattttttgaattgatttcgtgtacttgtac 6998387  T
Q  361 aactttattcgaatttattcaa 382  Q
    |||||||||| |||||||||||    
T  6998386 aactttattcaaatttattcaa 6998365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 403
Target Start/End: Complemental strand, 23228075 - 23227933
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||    
T  23228075 atgatgataccacatatatttagggagaatgtagtgtaatgtagatgaaattaaaac-aaataaaattatgtacttttttaattgattttgtgtacttgt 23227977  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    || ||||||||||||||||||||||||  || |||||||||||||    
T  23227976 gccactttattcgaatttattcaatacgtaa-ttttattcaaatt 23227933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 261 - 379
Target Start/End: Original strand, 19748706 - 19748826
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||||| ||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| || |    
T  19748706 atgatgataccacatatatttagggagaatgtaatctaatgtagatgaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtaattat 19748805  T
Q  359 gcaactttattcgaatttatt 379  Q
    |  ||||||||||||||||||    
T  19748806 gtcactttattcgaatttatt 19748826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 261 - 413
Target Start/End: Complemental strand, 8531657 - 8531504
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| |||||||||   ||||||||||||||||| ||||||||||  |  || ||| ||||||||||||||| ||||    
T  8531657 atgatgataccacatatatttagggagaatgtaatgttttgtagatgaaattaaaaccaaataaaattgtgagttattttaattgattttgtgtatttgt 8531558  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    ||||||||||||||||||||| ||||  |||| |||| ||| |||||||||||||    
T  8531557 gcaactttattcgaatttatttaatatgcaac-tttaatcagatttattcaatac 8531504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 16417749 - 16417557
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagaggg 139  Q
    |||||||||| || ||||||||||||| ||| |||||   |||||||||||||||||   |||||   |||||||| | |||||||||||| |||||||     
T  16417749 catcttatatgagggaattcgatgtgagaacttatatt--gttgatttggtagaatacatgtgttgtgttctcttcattcttttgagtttttaaagaggc 16417652  T
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataattt--aaacccaacatcatgatgata 232  Q
    |||||||| | |||||||| ||||||| | ||||||||||| ||||||||||||||||||| ||| ||||||  ||| |||| ||||||||||||    
T  16417651 ttgcaaatttttacactaagtataagacattttaataccaatattttgagcaaactttcaagaatttaatttaaaaatccaatatcatgatgata 16417557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 15794683 - 15794575
Alignment:
Q  299 gtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatt----tattcaatacacaactttt 394  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||  ||||||||||||||    |||||||||||||| ||||    
T  15794683 gtagatgaaattaaaactaaataaaattgtgtatttttttaattgattttgtgtacttgtgtcactttattcgaatttatttattcaatacacaattttt 15794584  T
Q  395 attcaaatt 403  Q
    |||| ||||    
T  15794583 attcgaatt 15794575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 25360043 - 25359925
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  || ||||| ||||||||||| |||||||||||||||| |||||||||||  ||||||||| ||||||||||||||| ||||    
T  25360043 atgatgataccacatatattttgggagaatgtaatgtaatgtagatgaaattaaaa-taaataaaattgtgtatttttt-aattgattttgtgtaattgt 25359946  T
Q  359 gcaactttattcgaatttatt 379  Q
    |  ||||||||||||||||||    
T  25359945 gtcactttattcgaatttatt 25359925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 277 - 393
Target Start/End: Original strand, 31238707 - 31238822
Alignment:
Q  277 tttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaattt 376  Q
    ||||||||| ||||| ||||||| |||||||||| |||||||||||||||  ||||||||| ||| ||||||||||| |||||||||| |||||||| ||    
T  31238707 tttagggagaatgtagtgtaacgaagatgaaatttaaactaaataaaattgtgtatttttttaatcgattttgtgtatttgtgcaactatattcgaa-tt 31238805  T
Q  377 attcaatacacaacttt 393  Q
    ||||||||  |||||||    
T  31238806 attcaatatgcaacttt 31238822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 10976400 - 10976538
Alignment:
Q  79 tatatagttgatttggtagaata--agtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatacttta 173  Q
    |||||||||||||||||||||||  ||||||   || ||||| | ||||||| |||||||||   | ||||||||||||| |||| ||||||| |||||     
T  10976400 tatatagttgatttggtagaatacaagtgttgtgttatcttcattcttttgaattttcaaaggatgctgcaaatctctacgctaagtataagacactttg 10976499  T
Q  174 ataccaacattttgagcaaactttcaaaaatataattta 212  Q
    ||||||| |||||||| |||||||||| |||||||||||    
T  10976500 ataccaatattttgagtaaactttcaagaatataattta 10976538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 31488513 - 31488736
Alignment:
Q  18 tggaatacattcatttacatcgctgtccatcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt---ttctc 112  Q
    |||||| ||||| ||||| |||||   |||||||||| || ||||||||||||| ||| |||||    ||||||| ||||||||   |||||   |||||    
T  31488513 tggaatgcattcctttacgtcgctactcatcttatatgagggaattcgatgtgataacctatattc--ttgattttgtagaatacatgtgttgtgttctc 31488610  T
Q  113 ttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataattta 212  Q
    ||| | ||||||| | |||||||   ||||||||||||||| |  | ||||||| |||||||| |||| |||||  |||||||||||| |||||||||||    
T  31488611 ttcattcttttgaatattcaaaggatgttgcaaatctctacccgtagtataagacactttaatgccaaaattttcggcaaactttcaagaatataattta 31488710  T
Q  213 aacccaacatcatgatgataacacat 238  Q
    ||||| ||||||| |||||| |||||    
T  31488711 aacccgacatcattatgataccacat 31488736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 19748526 - 19748720
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt-ttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| || ||||| ||||| ||||  | ||||||| |||||| ||||||||   ||||| |||||||| | |||||||||||||||| ||  ||    
T  19748526 catcttatatgagggaatttgatgtaaaaa--tctatatagatgattttgtagaatacatgtgttgttctcttcattcttttgagttttcaaacagactt 19748623  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||| | |||||||| |||| || |||| ||| ||||||||||  | |||||||||| |||  |||||||| |||| |||||||||||| |||||    
T  19748624 gcaaatttttacactaagtatacgacacttcaatgccaacattttcggaaaactttcaagaattaaatttaaatccaaaatcatgatgataccacat 19748720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 45 - 232
Target Start/End: Original strand, 31238511 - 31238697
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgttttc-tcttcctacttttgagttttcaaagagggttgc 143  Q
    |||||||||| ||  |||||||||||||||| |||| |  ||||||| |||||||||  ||||  | ||||| | ||||||| ||||||||| | | |||    
T  31238511 catcttatatgagttaattcgatgtgaaaacctataaa--gttgattcggtagaatacatgttgccctcttcattcttttgacttttcaaagggcgctgc 31238608  T
Q  144 aaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    ||||| ||||||||| ||||||| | || ||| |||||||||| || |||||| | | |||| || |||||||||||||||| ||||||    
T  31238609 aaatcactacactaagtataagacagttcaatgccaacatttttagtaaacttcccacaataaaacttaaacccaacatcattatgata 31238697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 16417542 - 16417470
Alignment:
Q  287 atgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtg 359  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||||| || ||||||||    
T  16417542 atgtaatgtgacgtagatgaaattaaaactaaataaaattgtgtatttttggaattgatttcgtttacttgtg 16417470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 34595771 - 34595968
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata---agtgtttt---ctcttcctacttttgagttttcaaagagg 138  Q
    |||||||||| |  ||||||||||||||||| ||||||  |||||||||||||||||   |||||| |   |||||| | ||||||||||||||||||||    
T  34595771 catcttatatgaaggaattcgatgtgaaaacttatata--gttgatttggtagaatacaaagtgttgtgctctcttcattcttttgagttttcaaagagg 34595868  T
Q  139 gttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    | ||||||||| ||||||||  |||| | |||| ||| | |  |||||    ||||||| || ||| |||||||||  |||||||||||||||| |||||    
T  34595869 gctgcaaatctttacactaagcataaaacacttcaatgctagtattttcgataaacttttaagaatttaatttaaattcaacatcatgatgataccacat 34595968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 36311369 - 36311268
Alignment:
Q  262 tgatgataccacatatttagggaggatgtaa----tgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttg 357  Q
    ||||||||||||||||||||| || ||||||    |||| | |||| ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||    
T  36311369 tgatgataccacatatttaggaagaatgtaactaatgtatcatagaagaaattaaaactaaataaaattgtgtatttttttaattgattatgtgtacttg 36311270  T
Q  358 tg 359  Q
    ||    
T  36311269 tg 36311268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 10976225 - 10976070
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata--agt-gttttctcttcctacttttgagttttcaaagagggtt 141  Q
    ||||||||| ||| |||||||||| |||||||||||||  |||||||||||| ||||  ||| || |||||||| | ||||||| |||||||||   | |    
T  10976225 catcttatacaagggaattcgatgcgaaaacatatata--gttgatttggtaaaatacaagttgtgttctcttcattcttttgacttttcaaaggatgct 10976128  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttca 199  Q
    |||||||| ||| |||| ||||||| | ||||||| |||||| || ||||||||||||    
T  10976127 gcaaatctttacgctaagtataagacattttaataacaacatcttcagcaaactttca 10976070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 485 - 679
Target Start/End: Original strand, 31488932 - 31489125
Alignment:
Q  485 atcaactccctcaccacttaattcaattgggttgtcctcgacaatttctggggcacctgcttttagat-gcgaatcaaaataacaggttcttcctcttcg 583  Q
    |||| |||||||  ||||||| ||||||||||||||||  ||  || ||||| ||||||||||| | | |||| ||||||||||| ||  |||| || |     
T  31488932 atcatctccctcttcacttaagtcaattgggttgtccttaacggttcctgggacacctgcttttggctagcga-tcaaaataacacgtctttccgctcct 31489030  T
Q  584 tcccgtcttgttgaaattgtacacgggcatattcaccttacttttttgtctggttccttcacatttgatatcgtaccatgtcacggcggtttttgc 679  Q
    || | ||||||||||||||||||| | ||  |||||||| |||||||||| || |||||| |||| ||||| || ||||||||||| |||||||||    
T  31489031 tctcatcttgttgaaattgtacactgacac-ttcaccttgcttttttgtcgggatccttcgcattcgatattgtgccatgtcacggtggtttttgc 31489125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 15794833 - 15794704
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||||| ||||||||| | ||||||||||||||| | || |||| || ||||  || ||||| |||| ||||||||||||| |||  |    
T  15794833 ttctcttcattcttttgacttttcaaag-gtgttgcaaatctctacccgaagtatacgacacttccatgccaacttttttagcaaactttcaagaattaa 15794735  T
Q  208 atttaaacccaacatcatgatgataacacat 238  Q
    ||||||| ||||||||||||||||| |||||    
T  15794734 atttaaatccaacatcatgatgataccacat 15794704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 16417924 - 16418032
Alignment:
Q  79 tatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaat 175  Q
    ||||||||| |||||||| ||||  ||||   |||||||| | |||||||||||||||||||  |||||||  | |||||||||||||||| ||||||||    
T  16417924 tatatagttaatttggtaaaatacatgttgtgttctcttcattcttttgagttttcaaagagacttgcaaacttttacactaactataagacactttaat 16418023  T
Q  176 accaacatt 184  Q
    |||||||||    
T  16418024 accaacatt 16418032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 6998668 - 6998478
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgtttt-----ctcttcctacttttgagttttcaaagaggg 139  Q
    |||||||||| |  || |||||||||||||| |||| |  |||||||||||||||||  ||| ||     |||||| | |||||||||||||||| ||      
T  6998668 catcttatatgatggagttcgatgtgaaaacctataaa--gttgatttggtagaatacatgtgttatgtgctcttcattcttttgagttttcaaatagtc 6998571  T
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    |||||||| | |||  ||| ||||||| |||| ||| ||| ||||||  ||||||||||||  || |||||||||| ||||||||||||||||    
T  6998570 ttgcaaatttttactataagtataagacacttcaatgccagcattttcggcaaactttcaaggatttaatttaaactcaacatcatgatgata 6998478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 59 - 238
Target Start/End: Complemental strand, 26604238 - 26604058
Alignment:
Q  59 gaattcgatgtgaaaacatatatatagttgatttggtagaata---agtgttttctcttcctacttttgagttttcaaagagggttgcaaatctctacac 155  Q
    ||||||||||||| ||||| ||||   ||||||||||||||||   | ||| |||||||  |  ||||||||||||||||||  |||||||| | ||||     
T  26604238 gaattcgatgtgagaacatttataa--ttgatttggtagaatacaaaatgtgttctcttaattgttttgagttttcaaagagacttgcaaatttttacat 26604141  T
Q  156 taactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    ||| ||||||| |||| ||| ||||||||||  | |||||||||  ||| ||||||||| || |||||||| ||||| |||||    
T  26604140 taagtataagacacttcaatgccaacattttcggtaaactttcatgaatttaatttaaatcctacatcatgttgataccacat 26604058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 19575774 - 19575892
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaa 219  Q
    ||||||||||||| ||||  |||||| | | ||||| || ||||||||| || ||| ||||||||||   ||||||||||  ||| ||||||||| ||||    
T  19575774 ttttgagttttcatagagacttgcaattttttacaccaagtataagatatttcaatgccaacattttcgacaaactttcatgaatttaatttaaatccaa 19575873  T
Q  220 catcatgatgataacacat 238  Q
    ||||||||||||| |||||    
T  19575874 catcatgatgatatcacat 19575892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 23228257 - 23228061
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagaggg 139  Q
    |||||||||| || ||||||||||||| ||  | ||||||||||||||| ||||||||  |||||   |||||||  | |||||||||||||| ||        
T  23228257 catcttatatgagggaattcgatgtgagaa--tttatatagttgatttgatagaataaatgtgttgtgttctcttaattcttttgagttttcacaggaca 23228160  T
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
     |||||||| |||| |||| ||||||| |||| ||| |||| ||||| |  |||||| ||| |||  || ||||||||||||||||||||||| |||||    
T  23228159 ctgcaaatcactacgctaagtataagacacttcaatgccaagattttcactaaacttccaacaattaaacttaaacccaacatcatgatgataccacat 23228061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 25360268 - 25360438
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggtt 141  Q
    ||||||||| ||| ||||||||||||||||| |||||| |  |||||| | ||||||  ||||   |||||||| | |||||||||||||||| ||  ||    
T  25360268 catcttatacaagggaattcgatgtgaaaacctatataga--tgattttgcagaatacatgttgtgttctcttcattcttttgagttttcaaacagactt 25360365  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaa 214  Q
    |||||  | ||| |||  ||||||| |||| ||||||||||| || ||||||||  ||| ||| |||||||||    
T  25360366 gcaaacttttaccctatgtataagacacttcaataccaacatcttcagcaaactaacaagaatttaatttaaa 25360438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 25360147 - 25360029
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaa 219  Q
    |||||| |||||||| ||  |||||||| | |||||||| |||| || |||| ||| ||||||||||  |||||||||||| |||  |||||||| ||||    
T  25360147 ttttgaattttcaaacagacttgcaaatttttacactaaatatacgacacttcaatgccaacattttcggcaaactttcaagaattaaatttaaatccaa 25360048  T
Q  220 catcatgatgataacacat 238  Q
      ||||||||||| |||||    
T  25360047 tttcatgatgataccacat 25360029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 36311552 - 36311356
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagaggg 139  Q
    |||||||||| |  ||||||||||| | ||||||||||  |||||||| ||||||||   |||||   |||||||| | || |||| ||||||| ||  |    
T  36311552 catcttatatgaaggaattcgatgtcataacatatata--gttgattttgtagaatacatgtgttgtgttctcttcattctattgacttttcaacgaaag 36311455  T
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||||||||||| | || |||| || |||| ||| | | ||||||  ||||||||| || ||| ||||||||| |||||||| |||||||| |||||    
T  36311454 ttgcaaatctctacccaaagtatatgacacttcaattctaccattttctgcaaacttttaagaatttaatttaaatccaacatcctgatgataccacat 36311356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 11477483 - 11477360
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | |||||||||||||||||||  | |||||| | |||||||| ||||| | |||| ||| ||||||||||  |||||||| ||  ||| ||    
T  11477483 ttctcttcattcttttgagttttcaaagagactggcaaatttttacactaagtataacacacttcaatgccaacattttcggcaaacttccatgaattta 11477384  T
Q  208 atttaaacccaacatcatgatgat 231  Q
    | ||||||| ||||| ||| ||||    
T  11477383 acttaaacctaacatgatggtgat 11477360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 37397341 - 37397416
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaac 194  Q
    |||||||||||| ||||||  |||||||| | || ||||| ||||||| |||| ||| ||||||||||||| ||||    
T  37397341 cttttgagttttgaaagagacttgcaaatttttaaactaagtataagacacttcaatgccaacattttgaggaaac 37397416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 364 - 398
Target Start/End: Original strand, 10398659 - 10398693
Alignment:
Q  364 tttattcgaatttattcaatacacaacttttattc 398  Q
    |||||||||||||||||||||||||| ||||||||    
T  10398659 tttattcgaatttattcaatacacaatttttattc 10398693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 10976805 - 10976839
Alignment:
Q  204 tataatttaaacccaacatcatgatgataacacat 238  Q
    ||||||||||||||||||||||||||||| |||||    
T  10976805 tataatttaaacccaacatcatgatgataccacat 10976839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 28718721 - 28718819
Alignment:
Q  141 tgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacatt 239  Q
    ||||||||| |||||||| ||||||| |||| ||| ||||  ||||  |||||||| ||| |||  |||||||| | | ||||||||||||| ||||||    
T  28718721 tgcaaatctttacactaagtataagacacttcaatgccaatctttttcgcaaacttccaacaattaaatttaaatctagcatcatgatgataccacatt 28718819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 31238814 - 31238867
Alignment:
Q  358 tgcaactttattcgaatttattcaatacacaacttttattcaaatttattcaata 412  Q
    ||||||||||  ||||||| ||||||||||||| ||||||| |||||||||||||    
T  31238814 tgcaactttaaacgaatttcttcaatacacaac-tttattcgaatttattcaata 31238867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 393
Target Start/End: Original strand, 10398549 - 10398578
Alignment:
Q  364 tttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||||||||||||||||||||||    
T  10398549 tttattcgaatttattcaatacacaacttt 10398578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 10978425 - 10978498
Alignment:
Q  504 aattcaattgggttgtcctcgacaatttctggggcacctgcttttagatgcgaatcaaaataacaggttcttcc 577  Q
    ||||||||||||||||||||| || || |||||| |||||||||| | || | | |||||||||| || |||||    
T  10978425 aattcaattgggttgtcctcgtcagttcctggggaacctgcttttggttgaggaccaaaataacaagtccttcc 10978498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 403
Target Start/End: Original strand, 18921534 - 18921579
Alignment:
Q  358 tgcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    |||||||||||||||||||||| ||||| ||| |||||||| ||||    
T  18921534 tgcaactttattcgaatttatttaatacgcaatttttattcgaatt 18921579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 393
Target Start/End: Original strand, 31238928 - 31238957
Alignment:
Q  364 tttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||||||||||||||||||||||    
T  31238928 tttattcgaatttattcaatacacaacttt 31238957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 6e-42; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 263 - 393
Target Start/End: Original strand, 43688474 - 43688605
Alignment:
Q  263 gatgataccacatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgta-ttttttgaattgattttgtgtacttgtgca 361  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||||| |||||||||||||    
T  43688474 gatgttaccacatatttagggagaatgtaatgtaacgtagatgaaattaaaactaaataaaattgtgcatttttttgaattgatttcgtgtacttgtgca 43688573  T
Q  362 actttattcgaatttattcaatacacaacttt 393  Q
    |||||||| ||||||||||||||  |||||||    
T  43688574 actttatttgaatttattcaatatgcaacttt 43688605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 261 - 413
Target Start/End: Complemental strand, 50341832 - 50341679
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  ||||| || ||||||||||| || |||||||||||||||||||||||||  ||||||||| || |||||||||||| |||     
T  50341832 atgatgataccacatatatttaggtagaatgtaatgtaatgttgatgaaattaaaactaaataaaattgtgtatttttttaaatgattttgtgtatttgc 50341733  T
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    ||||||||| ||| |||||||||||||| |||||| ||| ||| |||||||||||    
T  50341732 gcaactttaatcggatttattcaatacagaactttaattgaaa-ttattcaatac 50341679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 17266936 - 17266743
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt-ttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||| ||||||| || ||||||||||||||||||||||  ||||||||||| |||||   ||||| |||||||| | ||||||| ||| |||||   | |    
T  17266936 catcctatataaaaggattcgatgtgaaaacatatata--gttgatttggtggaatacatgtgttgttctcttcattcttttgaattt-caaaggatgct 17266840  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    |||||||||||| |  | ||||||| |||| ||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  17266839 gcaaatctctactcggagtataagacacttcaatgccgacattttcagcaaactttcaagaatataatttaaacccaacatcatgatgataccacat 17266743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 290 - 393
Target Start/End: Complemental strand, 1638046 - 1637943
Alignment:
Q  290 taatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatttattcaatacacaa 389  Q
    |||| ||| |||||| ||||||||||||| |||||||   |||||||||| || ||||||||||||||||| |||||||| |||||||||||||||||||    
T  1638046 taatttaatgtagattaaattaaaactaattaaaattgtatattttttgagttaattttgtgtacttgtgccactttattagaatttattcaatacacaa 1637947  T
Q  390 cttt 393  Q
    ||||    
T  1637946 cttt 1637943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 29515777 - 29515659
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||| |||||||||||||| |||||||| | || ||||| ||||| | ||||||||||||| |||||||| |||||||||| ||| ||||||||  |||    
T  29515777 ctttttagttttcaaagaggcttgcaaatttttatactaagtataa-acactttaataccaatattttgagaaaactttcaataatttaatttaactcca 29515679  T
Q  219 acatcatgatgataacacat 238  Q
    ||||||||||||||||||||    
T  29515678 acatcatgatgataacacat 29515659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 17371433 - 17371563
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||| ||| |||||||||||||||||| ||  ||| || | | ||||| || ||||||| ||||||||||||||||||| ||||||||| ||| ||| ||    
T  17371433 ttcttttcatacttttgagttttcaaatagccttgaaattttttacaccaagtataagacactttaataccaacattttaagcaaacttgcaagaattta 17371532  T
Q  208 atttaaacccaacatcatgatgataacacat 238  Q
    ||||||| |||||||| | |||||| |||||    
T  17371533 atttaaatccaacatcgttatgataccacat 17371563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 1886106 - 1885975
Alignment:
Q  274 atatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtatt---ttttgaattga-ttttgtgtac----ttgtgcaactt 365  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||  |||||    ||| |||||| |||| |||||    |||||| ||||    
T  1886106 atatttatggagaatgtaatgtaatgtagatgaaattaaaactaaataaaattgtgtattctaattttaattgatttttttgtacttgtttgtgccactt 1886007  T
Q  366 tattcgaatttattcaatacacaacttttattc 398  Q
    |||||||||||||| ||||||||| ||||||||    
T  1886006 tattcgaatttattgaatacacaa-ttttattc 1885975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 485 - 606
Target Start/End: Original strand, 17371776 - 17371897
Alignment:
Q  485 atcaactccctcaccacttaattcaattgggttgtcctcgacaatttctggggcacctgcttttagatgcgaatcaaaataacaggttcttcctcttcgt 584  Q
    |||| |||||||| ||||||| ||||||||||||||||||||| || || | |||||| ||||| | || | | |||||||||| |||||| | || | |    
T  17371776 atcatctccctcatcacttaagtcaattgggttgtcctcgacagttcctagagcacctacttttggttgtggaccaaaataacatgttctttcactcctt 17371875  T
Q  585 cccgtcttgttgaaattgtaca 606  Q
    ||| ||||||||||||||||||    
T  17371876 cccatcttgttgaaattgtaca 17371897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 287 - 358
Target Start/End: Complemental strand, 773966 - 773895
Alignment:
Q  287 atgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    ||||||||||||||||||||||||| ||||||||||||||   ||||||||||||| || |||||| |||||    
T  773966 atgtaatgtaacgtagatgaaattataactaaataaaattgtctattttttgaattaatgttgtgttcttgt 773895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 1886343 - 1886452
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataagtgtt---ttctcttcctacttttgagttttcaaagagggtt 141  Q
    ||||||||| ||  |||||||||||||||||  ||||||||||||||||||| ||||  ||||   |||||||| | ||||||| |||||||| || |||    
T  1886343 catcttatacaacggaattcgatgtgaaaac--atatatagttgatttggtaaaatacatgttgtgttctcttcattcttttgacttttcaaaaagagtt 1886440  T
Q  142 gcaaatctctac 153  Q
    ||||||||||||    
T  1886441 gcaaatctctac 1886452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 29634553 - 29634373
Alignment:
Q  61 attcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacac 155  Q
    ||||||||||| |||||||| |  |||||||||||||||||   |||||   |||||||| | |||||||||||| ||||||  |  ||||| | |||||    
T  29634553 attcgatgtgataacatataaa--gttgatttggtagaatacatgtgttgcattctcttcattcttttgagtttttaaagagactaccaaatttttacac 29634456  T
Q  156 taactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    ||| ||||||| | || ||| |  ||||||| | |||||||  |||||| ||||||||| ||||||||||||||||| |||||    
T  29634455 taagtataagacatttcaatgctgacattttcaacaaacttgtaaaaatttaatttaaatccaacatcatgatgatatcacat 29634373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 11162449 - 11162374
Alignment:
Q  317 aaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||| ||| ||||||||||||| ||| |||||||    
T  11162449 aaataaaattgtgtattttttgaattaattttatgtacttgtgcaac-ttaatcgaatttattcagtacgcaacttt 11162374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 29788047 - 29788183
Alignment:
Q  59 gaattcgatgtgaaaacatatatatagttgatttggtagaata--agtgttttctcttcctacttttgagttttcaaagagggttgcaaatctctacact 156  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||  |  || |||||||| | |||||||||||||||||||  |||||||| | ||| ||    
T  29788047 gaattcgatgtgaaaacttatata--gttgattcggtagaatacaaacgtgttctcttcattcttttgagttttcaaagagacttgcaaatttttacgct 29788144  T
Q  157 aactataagatactttaataccaacattttgagcaaact 195  Q
    || ||||||| |||| |||  |||||| || ||||||||    
T  29788145 aagtataagacacttcaatgtcaacatcttcagcaaact 29788183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 78 - 238
Target Start/End: Complemental strand, 50341983 - 50341818
Alignment:
Q  78 atatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatacttt 172  Q
    ||||||||||||||| ||||||||   |||||   |||||||| | | ||||| ||||||||| | |||| ||||| ||||||||| ||||||| ||||     
T  50341983 atatatagttgattttgtagaatacacgtgttgtgttctcttcattcatttgacttttcaaagggcgttggaaatcactacactaagtataagacacttc 50341884  T
Q  173 aataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    ||| || |||||||   ||||||||||  |||  ||||||||  |||||||||||||||| |||||    
T  50341883 aattccgacattttcgacaaactttcatgaattaaatttaaattcaacatcatgatgataccacat 50341818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 29787812 - 29787701
Alignment:
Q  120 ttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaa 219  Q
    ||||||||||||||| ||  |  ||||| | |||||||| ||||||| |||| ||| ||||||||||  | |||||| ||  ||||||||||||||||||    
T  29787812 ttttgagttttcaaaaagactaacaaatttttacactaaatataagacacttcaatgccaacattttccgtaaacttccatgaatataatttaaacccaa 29787713  T
Q  220 catcatgatgat 231  Q
    ||| ||||||||    
T  29787712 catgatgatgat 29787701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 27096761 - 27096720
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  27096761 tcaattgggttgtcctcgacagtttctggggcacctgctttt 27096720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 17371552 - 17371672
Alignment:
Q  264 atgataccacatatttagggaggatgtaatgtaacgta-----gatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    ||||||||||||||||||| || | |||||||||||||     |||||||| ||| |||||||||||   |||||||| ||||| |||  |  |||||||    
T  17371552 atgataccacatatttaggaagaaagtaatgtaacgtaacgttgatgaaataaaatctaaataaaatcgtgtatttttggaatttattacgcatacttgt 17371651  T
Q  359 gcaactttattcgaatttatt 379  Q
    |||| ||||||| ||||||||    
T  17371652 gcaattttattcaaatttatt 17371672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 1638180 - 1638069
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||||||||||||||||  | ||||||||| |||||||| ||||||| | || ||| |||| ||||| || |||| ||||||| || || ||||  |||    
T  1638180 cttttgagttttcaaagaacgctgcaaatctttacactaagtataagacagttaaatgccaagatttttagtaaac-ttcaaaatta-aacttaagtcca 1638083  T
Q  219 acatcatgatgata 232  Q
    ||||||||||||||    
T  1638082 acatcatgatgata 1638069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 11162529 - 11162488
Alignment:
Q  191 aaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  11162529 aaactttcaagaatataatttaaacccaacatcttgatgata 11162488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 15637574 - 15637622
Alignment:
Q  364 tttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  15637574 tttattcgaatttattcaatacacaac-tttatttgaatttattcaatac 15637622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 1886204 - 1886113
Alignment:
Q  141 tgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    ||||||||||||| | || |||| || |||| ||| ||||| ||||  |||||||| |||||||  || ||||| |||||||||||||||||    
T  1886204 tgcaaatctctacccgaagtatatgacacttcaatcccaactttttccgcaaacttccaaaaattaaacttaaatccaacatcatgatgata 1886113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 548
Target Start/End: Complemental strand, 50458335 - 50458280
Alignment:
Q  493 cctcaccacttaattcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    |||||||||  || ||||||||||||||||||||| |  |||||||||||||||||    
T  50458335 cctcaccacacaagtcaattgggttgtcctcgacagtccctggggcacctgctttt 50458280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 361 - 403
Target Start/End: Original strand, 7955428 - 7955470
Alignment:
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    ||||||||||||||||||||||||||||  |||||||| ||||    
T  7955428 aactttattcgaatttattcaatacacagtttttattctaatt 7955470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 10052427 - 10052386
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  10052427 tcaattgggttgtcctcgacaatccatggggcacctgctttt 10052386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 15637597 - 15637634
Alignment:
Q  360 caactttattcgaatttattcaatacacaacttttatt 397  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  15637597 caactttatttgaatttattcaatacacaatttttatt 15637634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 51012357 - 51012316
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  51012357 tcaattgggttgtccttgacagttcctggggcacctgctttt 51012316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 275 - 385
Target Start/End: Original strand, 9358 - 9468
Alignment:
Q  275 tatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaat 374  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||||||||  ||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  9358 tatttagggagaatgtaatgtaatgtagatgaaattaaaagtaaataaaattgtgtaattttttaattgattttgtgtatttgtgcaactttattcgaat 9457  T
Q  375 ttattcaatac 385  Q
     ||||||||||    
T  9458 ctattcaatac 9468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 4e-34; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 274 - 412
Target Start/End: Original strand, 25145406 - 25145542
Alignment:
Q  274 atatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaa 373  Q
    |||||||||||| ||||||||||| || |||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||| ||||| |||||    
T  25145406 atatttagggagaatgtaatgtaatgttgatgaaattaaaactaaataaaattgtgtatttttt-aattgattttgtgtatttgtgcagctttaatcgaa 25145504  T
Q  374 tttattcaatacacaacttttattcaaatttattcaata 412  Q
    |||||||||||| | ||||| |||  |||||||||||||    
T  25145505 tttattcaatacgcgactttaatt-gaatttattcaata 25145542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 274 - 413
Target Start/End: Original strand, 24075973 - 24076109
Alignment:
Q  274 atatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaa 373  Q
    |||||||||||| ||||| | ||| || |||||||||||||||||||||||||  ||||||||  |||| |||||||||| ||||||||||||| |||||    
T  24075973 atatttagggagaatgtattttaatgttgatgaaattaaaactaaataaaattgtgtattttt--aatttattttgtgtatttgtgcaactttaatcgaa 24076070  T
Q  374 tttattcaatacacaacttttattcaaatttattcaatac 413  Q
    |||||||||||  | || |||| |||||||||||||||||    
T  24076071 tttattcaatatgcgac-tttaatcaaatttattcaatac 24076109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 421
Target Start/End: Complemental strand, 28170968 - 28170906
Alignment:
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatttattcaataccaaaatgt 421  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  28170968 gcaactttattcgaatttattcaatacacaacttttatttaaatttattcaatacaaaaatgt 28170906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 20758507 - 20758393
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||| ||||     |||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  20758507 atgatgataccacatatatttagggagaatgtattgta-----gatgaaattaaaactaaataaaattgtgtatttttt-aattgattttgtgtaattgt 20758414  T
Q  359 gcaactttattcgaatttatt 379  Q
    |  ||||||||||||||||||    
T  20758413 gtcactttattcgaatttatt 20758393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 20764898 - 20764784
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||| ||||     |||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  20764898 atgatgataccacatatatttagggagaatgtactgta-----gatgaaattaaaactaaataaaattgtgtatttttt-aattgattttgtgtaattgt 20764805  T
Q  359 gcaactttattcgaatttatt 379  Q
    |  ||||||||||||||||||    
T  20764804 gtcactttattcgaatttatt 20764784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 20758689 - 20758493
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagaggg 139  Q
    |||||||||| || ||||||||||||| ||| |||| |  |||||||| ||||||||   |||||   |||||||| | ||||||| ||||||| | | |    
T  20758689 catcttatatgagggaattcgatgtgataacttataga--gttgattttgtagaatacatgtgttgtgttctcttcattcttttgacttttcaatgggcg 20758592  T
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
     |||||||| |||| || | ||||||| | || ||| ||||| ||||  |||||||||||| ||| ||||||||| ||||||||||||||||| |||||    
T  20758591 atgcaaatcactacgctgagtataagacaattcaatgccaacgtttttggcaaactttcaagaatttaatttaaatccaacatcatgatgataccacat 20758493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 20765080 - 20764884
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt---ttctcttcctacttttgagttttcaaagaggg 139  Q
    |||||||||| || ||||||||||||| ||| |||| |  |||||||| ||||||||   |||||   |||||||| | ||||||| ||||||| | | |    
T  20765080 catcttatatgagggaattcgatgtgataacttataga--gttgattttgtagaatacatgtgttgtgttctcttcattcttttgacttttcaatgggcg 20764983  T
Q  140 ttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
     |||||||| |||| || | ||||||| | || ||| ||||| ||||  |||||||||||| ||| ||||||||| ||||||||||||||||| |||||    
T  20764982 atgcaaatcactacgctgagtataagacaattcaatgccaacgtttttggcaaactttcaagaatttaatttaaatccaacatcatgatgataccacat 20764884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 23124423 - 23124229
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaataa--gtgtt-ttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| |||||||||||||||||||| |||||| |  |||||| ||||||||   ||||| |||||||| |  |||| |||||||||| ||  ||    
T  23124423 catcttatatgagagaattcgatgtgaaaacctatataga--tgattttgtagaatacatgtgttgttctcttcattattttaagttttcaaacagactt 23124326  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
     |||| || ||| ||||  |||||| |||| ||||||||||| || ||||| ||  ||| ||| ||||||||| ||||||||| ||||||| |||||    
T  23124325 acaaacctttaccctaagcataagacacttcaataccaacatcttcagcaatctaacaagaatttaatttaaatccaacatcacgatgataccacat 23124229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 24075853 - 24075966
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaaccca 218  Q
    ||||||| |||||| |||| | |||||||| |||| |||| ||||||| |||| ||| ||||||||||  | |||||||||| |||  |||||||| |||    
T  24075853 cttttgacttttcagagagcgctgcaaatcactacgctaagtataagacacttcaatgccaacatttttggaaaactttcaagaattaaatttaaatcca 24075952  T
Q  219 acatcatgatgata 232  Q
    ||||||||||||||    
T  24075953 acatcatgatgata 24075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 23124216 - 23124101
Alignment:
Q  291 aatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaattt----attcaataca 386  Q
    ||||||| ||||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||  ||||  ||||||||| |||||    ||||||||||    
T  23124216 aatgtaatgtagatgaacttaaaacaaaataaaattgtgtatttttt-aattgattttgtgtaactgtgtcactttattcaaatttattcattcaataca 23124118  T
Q  387 caacttttattcaaatt 403  Q
    ||| |||||||| ||||    
T  23124117 caatttttattcgaatt 23124101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 44101114 - 44101245
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctct-acactaactataagatactttaataccaacattttgagcaaactttcaaaaatat 206  Q
    |||||||| | |||||||||||| ||||||  |||||||| | | ||||||| ||||||| |||| |||  | |||| ||  |||||||||||| ||| |    
T  44101114 ttctcttcattcttttgagttttgaaagagacttgcaaattttttacactaagtataagacacttcaatgtcgacatattccgcaaactttcaagaattt 44101213  T
Q  207 aatttaaacccaacatcatgatgataacacat 238  Q
    |||||||| ||||||||||||||||| |||||    
T  44101214 aatttaaatccaacatcatgatgataccacat 44101245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 13866946 - 13867000
Alignment:
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatttattcaatac 413  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  13866946 gcaactttattcgaatttatttaatacacaacttttattcgaatttatttaatac 13867000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 23620430 - 23620342
Alignment:
Q  272 acatatttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtatttttt--gaattgattttgtgtacttgtg 359  Q
    ||||||||||| || ||||||||| | || ||||||||||||| |||||| ||||| |||||||||  ||||||||| ||||||||||||    
T  23620430 acatatttaggaagaatgtaatgtgatgt-gatgaaattaaaaataaatacaattatgtattttttttgaattgattatgtgtacttgtg 23620342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 359 - 403
Target Start/End: Original strand, 3394169 - 3394213
Alignment:
Q  359 gcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  3394169 gcaactttattcgaatttattcaatacacaatttttattcgaatt 3394213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 24576584 - 24576513
Alignment:
Q  160 tataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgat 231  Q
    ||||||| |||||| | |||| ||||| || ||||||||||||||  |||||||| ||||||||||||||||    
T  24576584 tataagacactttagtgccaatattttcagtaaactttcaaaaattcaatttaaatccaacatcatgatgat 24576513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 20759001 - 20759077
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaact 195  Q
    ||||||| |||||||||||| || |||||| ||||| | | ||||| | |||| |||||||||||||| ||||||||    
T  20759001 cttttgacttttcaaagaggctttcaaatcactacattcagtataaaacacttcaataccaacattttcagcaaact 20759077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 20765392 - 20765468
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaact 195  Q
    ||||||| |||||||||||| || |||||| ||||| | | ||||| | |||| |||||||||||||| ||||||||    
T  20765392 cttttgacttttcaaagaggctttcaaatcactacattcagtataaaacacttcaataccaacattttcagcaaact 20765468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 24075430 - 24075354
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaact 195  Q
    ||||||| |||||||||||| ||||||||| || || | | ||||||| |||| ||||||||||| || ||||||||    
T  24075430 cttttgacttttcaaagaggcttgcaaatcactgcattcagtataagacacttcaataccaacatcttcagcaaact 24075354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 25145275 - 25145399
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||||| ||||||| | |   |||||||| |||  |||| ||||||| |||| ||| |||||| |||  |||||||||||| | |  |    
T  25145275 ttctcttcattcttttgacttttcaatgggcactgcaaatcactaagctaagtataagacacttcaatgccaacaattttggcaaactttcaagagttaa 25145374  T
Q  208 atttaaacccaacatcatgatgata 232  Q
    ||||||| |||||||||||||||||    
T  25145375 atttaaatccaacatcatgatgata 25145399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 31931915 - 31931851
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacat 183  Q
    ||||||| |||||||||||| |||||||||| |||| | | ||||||| |||| |||||||||||    
T  31931915 cttttgacttttcaaagaggcttgcaaatctttacattcaatataagacacttcaataccaacat 31931851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 44101231 - 44101271
Alignment:
Q  261 atgatgataccacatatttagggaggatgtaatgtaacgta 301  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  44101231 atgatgataccacatatttcgggagaatgtaatgtaacgta 44101271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 297
Target Start/End: Complemental strand, 13522890 - 13522856
Alignment:
Q  263 gatgataccacatatttagggaggatgtaatgtaa 297  Q
    ||||||||||||||||||||||| |||||||||||    
T  13522890 gatgataccacatatttagggagaatgtaatgtaa 13522856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 361 - 403
Target Start/End: Original strand, 24607835 - 24607877
Alignment:
Q  361 aactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||    
T  24607835 aactttattcgaatttattcaatacgcaatttttattctaatt 24607877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 393
Target Start/End: Original strand, 13855152 - 13855181
Alignment:
Q  364 tttattcgaatttattcaatacacaacttt 393  Q
    ||||||||||||||||||||||||||||||    
T  13855152 tttattcgaatttattcaatacacaacttt 13855181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 14089410 - 14089301
Alignment:
Q  122 ttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaaca 221  Q
    ||||||||||||||||  | |||||| | |||||||| ||||||| |  | ||| ||||||||||  |||||||| ||  ||| |||||| || ||||||    
T  14089410 ttgagttttcaaagagactagcaaatttttacactaagtataagacatgtcaatgccaacattttcggcaaacttccatgaatttaatttcaatccaaca 14089311  T
Q  222 tcatgatgat 231  Q
    | ||||||||    
T  14089310 tgatgatgat 14089301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Original strand, 17292805 - 17292846
Alignment:
Q  507 tcaattgggttgtcctcgacaatttctggggcacctgctttt 548  Q
    ||||||||||||||||||||| | | ||||||||||||||||    
T  17292805 tcaattgggttgtcctcgacagtctttggggcacctgctttt 17292846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 403
Target Start/End: Original strand, 31324844 - 31324889
Alignment:
Q  358 tgcaactttattcgaatttattcaatacacaacttttattcaaatt 403  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||    
T  31324844 tgcaactttatttgaatttatttaatacacaatttttattcgaatt 31324889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 261 - 389
Target Start/End: Original strand, 122458 - 122583
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgt 358  Q
    |||||||||||||||||  |||||||| ||||||||||     |||||||||||||  ||||||||||  ||||||||| ||||||||||||||||||||    
T  122458 atgatgataccacatatatttagggagaatgtaatgta-----gatgaaattaaaataaaataaaattctgtatttttttaattgattttgtgtacttgt 122552  T
Q  359 gcaactttattcgaatttattcaatacacaa 389  Q
    || |||||||||||||||||| |||||||||    
T  122553 gccactttattcgaatttatttaatacacaa 122583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 3125 - 2998
Alignment:
Q  261 atgatgataccacatat--ttagggaggatgtaatgtaacgtagatg--aaattaaaactaaataaaattacgtattttttgaattgattttgtgtactt 356  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||||  ||| | ||| |||||||||||  ||||||||||||||||||||||||||||    
T  3125 atgatgataccacatatatttagggagaatgtaatgtaatgtagatgccaaaatcaaa-taaataaaattgtgtattttttgaattgattttgtgtactt 3027  T
Q  357 gtgcaactttattcgaatttattcaatac 385  Q
    ||| ||||||| |||||||||||||||||    
T  3026 gtgaaactttagtcgaatttattcaatac 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 3197 - 3111
Alignment:
Q  152 acactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgataacacat 238  Q
    ||||||| ||||| | |||||||| |||||||||| | ||||||||||| ||||||| ||||| || |||||||||||||| |||||    
T  3197 acactaagtataaaacactttaatcccaacattttaaacaaactttcaataatataacttaaatcctacatcatgatgataccacat 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 46050 - 45862
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata---agtgttttctcttcctacttttgagttttcaaagagggtt 141  Q
    |||||||||| |  ||||||||||||| ||||| | ||  |||||||| ||||||||   | ||| |||||||| | |||||||||||||||||||  ||    
T  46050 catcttatatgaaggaattcgatgtgagaacatgtgta--gttgattttgtagaatacaaaatgtgttctcttcattcttttgagttttcaaagagattt 45953  T
Q  142 gcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatataatttaaacccaacatcatgatgata 232  Q
    | |||| | |||||||| ||||||| |||| ||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||||||    
T  45952 gtaaatttttacactaagtataagacacttcaatgccaacatttttgacaaactttcttgaatataatttaaatccaacaacatgatgata 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 8e-20; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 287 - 379
Target Start/End: Original strand, 37345 - 37434
Alignment:
Q  287 atgtaatgtaacgtagatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatttatt 379  Q
    ||||||| ||| ||||||||||||||||||||||||||||  || |||||   ||||||||||||||||||||| | ||||||||||||||||    
T  37345 atgtaatataatgtagatgaaattaaaactaaataaaattgtgttttttt---attgattttgtgtacttgtgccagtttattcgaatttatt 37434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 37197 - 37314
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | ||||||| ||||||||||  ||||||||||||||||  || |||| || |||| ||| |||||||||   || ||||| |||||||  |    
T  37197 ttctcttcattcttttgacttttcaaagaaagttgcaaatctctacatgaagtatatgacacttcaatcccaacatttcccgctaacttccaaaaattaa 37296  T
Q  208 atttaaacccaacatcat 225  Q
    | ||||| ||||||||||    
T  37297 acttaaatccaacatcat 37314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 37086 - 37032
Alignment:
Q  45 catcttatataagagaattcgatgtgaaaacatatatatagttgatttggtagaata 101  Q
    |||| |||||||  ||||||||||||||||||||  |||||||||||||||| ||||    
T  37086 catcctatataaaggaattcgatgtgaaaacata--tatagttgatttggtaaaata 37032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 22237 - 22117
Alignment:
Q  108 ttctcttcctacttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaactttcaaaaatata 207  Q
    |||||||| | |||||||||||| ||||||  ||| || | | |||||||| ||||||| ||||||||| ||| ||||||| |||||   || |||| ||    
T  22237 ttctcttcattcttttgagttttgaaagagacttgaaattttttacactaagtataagacactttaatatcaatattttgaacaaacaaccacaaattta 22138  T
Q  208 atttaaacccaacatcatgat 228  Q
    |||||||||||||||||||||    
T  22137 atttaaacccaacatcatgat 22117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 36234 - 36157
Alignment:
Q  302 gatgaaattaaaactaaataaaattacgtattttttgaattgattttgtgtacttgtgcaactttattcgaatttatt 379  Q
    |||||||||||||||||||||||||   |||||||| || |||||||||||| |||||||||||| ||  ||||||||    
T  36234 gatgaaattaaaactaaataaaattgtatatttttttaaatgattttgtgtaattgtgcaactttcttgaaatttatt 36157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 502936 - 502996
Alignment:
Q  300 tagatgaaattaaaactaaataaaattacgtattttttg-aattgattttgtgtacttgtg 359  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||    
T  502936 tagatgaaattaaaactaaataaaattgtgtattttttgaaattgatttcgtgtacttgtg 502996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 3238 - 3313
Alignment:
Q  119 cttttgagttttcaaagagggttgcaaatctctacactaactataagatactttaataccaacattttgagcaaac 194  Q
    |||| ||||||||||||||  |  ||||| | |||||||| ||||||| |||||||| ||||||||||||||||||    
T  3238 ctttcgagttttcaaagagattgacaaatttttacactaaatataagacactttaatgccaacattttgagcaaac 3313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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