View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20740_high_10 (Length: 329)

Name: NF20740_high_10
Description: NF20740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20740_high_10
NF20740_high_10
[»] chr8 (11 HSPs)
chr8 (11-165)||(32805914-32806068)
chr8 (166-209)||(11335646-11335689)
chr8 (166-209)||(10117049-10117092)
chr8 (163-209)||(40640354-40640400)
chr8 (166-199)||(9015895-9015928)
chr8 (166-195)||(20524198-20524227)
chr8 (168-209)||(34326263-34326304)
chr8 (166-199)||(45045456-45045489)
chr8 (166-206)||(2805892-2805932)
chr8 (165-209)||(33385249-33385293)
chr8 (165-209)||(44521326-44521370)
[»] chr6 (4 HSPs)
chr6 (11-165)||(6094849-6095003)
chr6 (166-209)||(18886387-18886430)
chr6 (163-198)||(33689258-33689293)
chr6 (166-206)||(11746307-11746347)
[»] chr2 (9 HSPs)
chr2 (165-209)||(4563875-4563919)
chr2 (166-209)||(15859630-15859673)
chr2 (168-198)||(31211242-31211272)
chr2 (163-209)||(32143482-32143528)
chr2 (168-201)||(604883-604916)
chr2 (168-201)||(26269374-26269407)
chr2 (168-201)||(31175107-31175140)
chr2 (165-198)||(32218654-32218687)
chr2 (166-206)||(23377963-23378003)
[»] scaffold0631 (1 HSPs)
scaffold0631 (166-209)||(4365-4408)
[»] chr5 (14 HSPs)
chr5 (166-209)||(33075083-33075126)
chr5 (163-209)||(14772622-14772668)
chr5 (166-209)||(71277-71320)
chr5 (166-209)||(5984062-5984105)
chr5 (165-196)||(15549403-15549434)
chr5 (166-209)||(35032349-35032392)
chr5 (169-208)||(41814402-41814441)
chr5 (175-209)||(26045283-26045317)
chr5 (163-201)||(37554423-37554461)
chr5 (163-201)||(37685046-37685084)
chr5 (165-206)||(31691337-31691378)
chr5 (168-196)||(14642097-14642125)
chr5 (169-209)||(19868940-19868980)
chr5 (163-195)||(30778032-30778064)
[»] chr1 (7 HSPs)
chr1 (166-209)||(48083583-48083626)
chr1 (166-209)||(34953975-34954018)
chr1 (168-209)||(42761471-42761512)
chr1 (165-209)||(13048675-13048719)
chr1 (165-209)||(13053672-13053716)
chr1 (163-209)||(6758564-6758610)
chr1 (165-198)||(13043418-13043451)
[»] scaffold0149 (1 HSPs)
scaffold0149 (166-209)||(24624-24667)
[»] chr7 (13 HSPs)
chr7 (166-209)||(22752578-22752621)
chr7 (169-209)||(21886485-21886525)
chr7 (163-206)||(30138864-30138907)
chr7 (163-198)||(33935027-33935062)
chr7 (172-207)||(37489535-37489570)
chr7 (168-207)||(44416613-44416652)
chr7 (166-208)||(4089868-4089910)
chr7 (165-207)||(9930408-9930450)
chr7 (168-209)||(2943293-2943334)
chr7 (166-207)||(31813431-31813472)
chr7 (163-191)||(2534016-2534044)
chr7 (166-198)||(21586893-21586925)
chr7 (163-195)||(24617829-24617861)
[»] chr4 (18 HSPs)
chr4 (166-209)||(3511727-3511770)
chr4 (166-208)||(38298109-38298151)
chr4 (176-209)||(10308253-10308286)
chr4 (166-206)||(18423913-18423953)
chr4 (163-207)||(35151737-35151781)
chr4 (166-209)||(21142169-21142212)
chr4 (166-209)||(35425270-35425313)
chr4 (166-209)||(40952427-40952470)
chr4 (168-209)||(4406322-4406363)
chr4 (168-201)||(24331451-24331484)
chr4 (163-196)||(36786181-36786214)
chr4 (168-209)||(54508187-54508228)
chr4 (166-206)||(4484095-4484135)
chr4 (166-206)||(4708615-4708655)
chr4 (166-206)||(16170931-16170971)
chr4 (168-196)||(38938072-38938100)
chr4 (163-199)||(46803436-46803472)
chr4 (166-206)||(55416321-55416361)
[»] chr3 (12 HSPs)
chr3 (166-209)||(10872751-10872794)
chr3 (166-209)||(22497030-22497073)
chr3 (166-209)||(24722766-24722809)
chr3 (163-209)||(3648775-3648821)
chr3 (166-207)||(35987510-35987551)
chr3 (166-206)||(50466834-50466874)
chr3 (166-209)||(29389345-29389388)
chr3 (166-209)||(47334660-47334703)
chr3 (166-209)||(51060681-51060724)
chr3 (166-196)||(26243710-26243740)
chr3 (165-209)||(7601932-7601976)
chr3 (169-209)||(45736769-45736809)


Alignment Details
Target: chr8 (Bit Score: 151; Significance: 7e-80; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 32806068 - 32805914
Alignment:
Q  11 caaaggtgacaccgaaataccatcaaatcttgtctctgcaaacaaaaccagacctgcagcgttgcgcacaaccatcccccaacctgtcgtaccatcacta 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32806068 caaaggtgacaccgaaataccatcaaatcttgtctctgcacacaaaaccagacctgcagcgttgcgcacaaccatcccccaacctgtcgtaccatcacta 32805969  T
Q  111 aaacacccggcatcgacattgatcttaacataaccactaggaggtggaatccact 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32805968 aaacacccggcatcgacattgatcttaacataaccactaggaggtggaatccact 32805914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 11335646 - 11335689
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  11335646 atatacattattaattgaatgaatctaaaatgcaaagttttgct 11335689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 10117049 - 10117092
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| |||||||||||||||||||||| |||| |||||||    
T  10117049 atatacatcattaattgaatgaatctaaaatgtaaatttttgct 10117092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 40640354 - 40640400
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||| ||||| ||||||||||||||||||||||  |||||||||||    
T  40640354 actatgtacatcattaattgaatgaatctaaaatgcaaagttttgct 40640400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 9015895 - 9015928
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatata 199  Q
    |||||||| |||||||||||||||||||||||||    
T  9015895 atatacatcattaattgaatgaatctaaaatata 9015928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 20524227 - 20524198
Alignment:
Q  166 atatacattattaattgaatgaatctaaaa 195  Q
    ||||||||||||||||||||||||||||||    
T  20524227 atatacattattaattgaatgaatctaaaa 20524198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 34326304 - 34326263
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| ||||||||||||||||||||||  |||||||||||    
T  34326304 atacatcattaattgaatgaatctaaaatgcaaagttttgct 34326263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 45045456 - 45045489
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatata 199  Q
    |||||||| |||||||||||||||||||||||||    
T  45045456 atatacatcattaattgaatgaatctaaaatata 45045489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 2805892 - 2805932
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||||||||||||||||||| |||||| |||| ||||    
T  2805892 atatacattattaattgaatgaatttaaaatgtaaaatttt 2805932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 33385249 - 33385293
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| || |||||||||||||||||||||| ||| ||||||||    
T  33385249 tatatatatcattaattgaatgaatctaaaatgtaaggttttgct 33385293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 44521326 - 44521370
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||    
T  44521326 tatatacaccattaattgaatgaatctaaaattcaaagttttgct 44521370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 4e-75; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 6094849 - 6095003
Alignment:
Q  11 caaaggtgacaccgaaataccatcaaatcttgtctctgcaaacaaaaccagacctgcagcgttgcgcacaaccatcccccaacctgtcgtaccatcacta 110  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094849 caaaggtgacaccgagataccatcaaatcttgtctctgcaaacaaaaccagacctgcagcgttgcgcacaaccatcccccaacctgtcgtaccatcacta 6094948  T
Q  111 aaacacccggcatcgacattgatcttaacataaccactaggaggtggaatccact 165  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  6094949 aaacacccggcatcgacgttgatcttaacataaccactaggaagtggaatccact 6095003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 18886387 - 18886430
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| ||||||||||||||| |||||||||||||||||||||    
T  18886387 atatacgttattaattgaatgactctaaaatataaagttttgct 18886430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 33689293 - 33689258
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatat 198  Q
    ||||||||||||||||||||||||||| ||||||||    
T  33689293 actatatacattattaattgaatgaatataaaatat 33689258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 11746307 - 11746347
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||| |||||||||||||||||||||| |||| ||||    
T  11746307 atatacatcattaattgaatgaatctaaaatgtaaattttt 11746347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 4563919 - 4563875
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  4563919 tatatacattattaattgaatgaatctaaaatataaacttttgct 4563875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 15859630 - 15859673
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||||||||||||||||||||||| | |||||||    
T  15859630 atatacatcattaattgaatgaatctaaaatatagatttttgct 15859673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 198
Target Start/End: Complemental strand, 31211272 - 31211242
Alignment:
Q  168 atacattattaattgaatgaatctaaaatat 198  Q
    |||||||||||||||||||||||||||||||    
T  31211272 atacattattaattgaatgaatctaaaatat 31211242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 32143482 - 32143528
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||| | ||||||||||||||| |||||| ||||||||||||    
T  32143482 actatatacttcattaattgaatgaatttaaaatgtaaagttttgct 32143528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 604916 - 604883
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaa 201  Q
    |||||||||||||||||||||||||||| |||||    
T  604916 atacattattaattgaatgaatctaaaaaataaa 604883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 26269374 - 26269407
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaa 201  Q
    |||||||||||||| |||||||||||||||||||    
T  26269374 atacattattaattaaatgaatctaaaatataaa 26269407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 31175140 - 31175107
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaa 201  Q
    |||||| |||||||||||||||||||||||||||    
T  31175140 atacatcattaattgaatgaatctaaaatataaa 31175107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 32218654 - 32218687
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatat 198  Q
    ||||||||| ||||||||||||||||||||||||    
T  32218654 tatatacatcattaattgaatgaatctaaaatat 32218687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 23378003 - 23377963
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||| ||||||||||||||||||||||  ||||||||    
T  23378003 atatacatcattaattgaatgaatctaaaatgcaaagtttt 23377963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 4408 - 4365
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  4408 atatacgttattaattgaatgaatctaaaatataaagttttgct 4365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 33075126 - 33075083
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  33075126 atatacgttattaattgaatgaatctaaaatataaagttttgct 33075083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 14772622 - 14772668
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14772622 actatatacatcattaattgaattaatctaaaatataaagttttgct 14772668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 71320 - 71277
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||||||||||||||||||||||| | |||||||    
T  71320 atatacatcattaattgaatgaatctaaaatatagatttttgct 71277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 5984062 - 5984105
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||||||||||||||||||||  |||||||||||    
T  5984062 atatacatcattaattgaatgaatctaaaatgcaaagttttgct 5984105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 196
Target Start/End: Original strand, 15549403 - 15549434
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaat 196  Q
    ||||||||||||||||||||||||||||||||    
T  15549403 tatatacattattaattgaatgaatctaaaat 15549434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 35032349 - 35032392
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| |||||||||||||||||||||| |||| |||||||    
T  35032349 atatacataattaattgaatgaatctaaaatgtaaatttttgct 35032392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 41814441 - 41814402
Alignment:
Q  169 tacattattaattgaatgaatctaaaatataaagttttgc 208  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  41814441 tacattattaattgaatgaatctaaaatgtaaatttttgc 41814402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 26045317 - 26045283
Alignment:
Q  175 attaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||||||||||||||||||||| |||||||    
T  26045317 attaattgaatgaatctaaaatataaatttttgct 26045283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 37554423 - 37554461
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaa 201  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  37554423 actacatacattattaattgaatgaatctaaaaaataaa 37554461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 37685046 - 37685084
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaa 201  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  37685046 actacatacattattaattgaatgaatctaaaaaataaa 37685084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 31691337 - 31691378
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||    
T  31691337 tatatacatcattaattgaatgaatctcaaatataaattttt 31691378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 196
Target Start/End: Original strand, 14642097 - 14642125
Alignment:
Q  168 atacattattaattgaatgaatctaaaat 196  Q
    |||||||||||||||||||||||||||||    
T  14642097 atacattattaattgaatgaatctaaaat 14642125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 19868980 - 19868940
Alignment:
Q  169 tacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||||| ||||||||||||||||||| | |||||||    
T  19868980 tacattattaaatgaatgaatctaaaatatagatttttgct 19868940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 30778064 - 30778032
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaa 195  Q
    |||| ||||||||||||||||||||||||||||    
T  30778064 actaaatacattattaattgaatgaatctaaaa 30778032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 48083583 - 48083626
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  48083583 atatacgttattaattgaatgaatctaaaatataaagttttgct 48083626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 34953975 - 34954018
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  34953975 atatacatcattaattgaatgaatctaaaatataaatttttgct 34954018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 42761512 - 42761471
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  42761512 atacatcattaattgaatgaatctaaaatgtaaagttttgct 42761471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 13048719 - 13048675
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||| |||||||||||||||||||||||| || |||||||    
T  13048719 tatatacatcattaattgaatgaatctaaaatattaatttttgct 13048675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 13053716 - 13053672
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||| |||||||||||||||||||||||| || |||||||    
T  13053716 tatatacatcattaattgaatgaatctaaaatattaatttttgct 13053672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 6758610 - 6758564
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||||| ||||||||||||||| ||||||  |||||||||||    
T  6758610 actatatacatcattaattgaatgaatgtaaaatgcaaagttttgct 6758564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 13043418 - 13043451
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatat 198  Q
    ||||||||| ||||||||||||||||||||||||    
T  13043418 tatatacatcattaattgaatgaatctaaaatat 13043451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 24667 - 24624
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| |||||||||||||||||||||||||||| ||||||||    
T  24667 atatacgttattaattgaatgaatctaaaatataatgttttgct 24624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 22752621 - 22752578
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  22752621 atatacattatttattgaatgaatctaaaatataaatttttgct 22752578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 21886525 - 21886485
Alignment:
Q  169 tacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  21886525 tacatcattaattgaatgaatctaaaatataaatttttgct 21886485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 30138864 - 30138907
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||    
T  30138864 actatatacatcattaattgaatgaatctaaaatgtaaattttt 30138907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 33935062 - 33935027
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatat 198  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33935062 actatatacattattaaatgaatgaatctaaaatat 33935027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 37489570 - 37489535
Alignment:
Q  172 attattaattgaatgaatctaaaatataaagttttg 207  Q
    |||||||||||||||||||||||||||||| |||||    
T  37489570 attattaattgaatgaatctaaaatataaatttttg 37489535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 44416613 - 44416652
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaagttttg 207  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  44416613 atacataattaattgaatgaatctaaaatataaatttttg 44416652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 4089868 - 4089910
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgc 208  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||    
T  4089868 atatacatcattaattgaatgaatataaaatataaatttttgc 4089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 9930450 - 9930408
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagttttg 207  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||    
T  9930450 tatatacataattaattaaatgaatctaaaatataaatttttg 9930408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 2943293 - 2943334
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||||||||||||||||| ||||||||||  |||||||    
T  2943293 atacattattaattgaatgaatgtaaaatataattttttgct 2943334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 31813472 - 31813431
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttg 207  Q
    |||||||| |||||||||||||||||||||| |||| |||||    
T  31813472 atatacatcattaattgaatgaatctaaaatgtaaatttttg 31813431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 2534016 - 2534044
Alignment:
Q  163 actatatacattattaattgaatgaatct 191  Q
    |||||||||||||||||||||||||||||    
T  2534016 actatatacattattaattgaatgaatct 2534044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 21586893 - 21586925
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatat 198  Q
    |||||||| ||||||||||||||||||||||||    
T  21586893 atatacatcattaattgaatgaatctaaaatat 21586925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 24617861 - 24617829
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaa 195  Q
    ||||||||||||||| |||||||||||||||||    
T  24617861 actatatacattatttattgaatgaatctaaaa 24617829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 3511770 - 3511727
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  3511770 atatacatcattaattgaatgaatctaaaatgtaaagttttgct 3511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 38298151 - 38298109
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgc 208  Q
    |||||||| ||||||||||||||||||||||||||| ||||||    
T  38298151 atatacatcattaattgaatgaatctaaaatataaaattttgc 38298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 10308286 - 10308253
Alignment:
Q  176 ttaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||||||||||||||||||||||||||||    
T  10308286 ttaattgaatgaatctaaaatataaagttttgct 10308253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 18423953 - 18423913
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  18423953 atatacatcattaattgaatgaatctaaaatataaattttt 18423913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 35151737 - 35151781
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaagttttg 207  Q
    ||||||||||| || |||||||||||||||||||| |||||||||    
T  35151737 actatatacatcatcaattgaatgaatctaaaatacaaagttttg 35151781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 21142169 - 21142212
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||    
T  21142169 atatacatcattaattaaatgaatctaaaatataaacttttgct 21142212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 35425313 - 35425270
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||    
T  35425313 atatacatcattaaatgaatgaatctaaaatttaaagttttgct 35425270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 40952427 - 40952470
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||  |||||||||||||||||||||||||| |||||||    
T  40952427 atatacatatttaattgaatgaatctaaaatataaatttttgct 40952470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 4406322 - 4406363
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| |||||||||||||||| |||||||||| |||||||    
T  4406322 atacatcattaattgaatgaatccaaaatataaatttttgct 4406363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 24331484 - 24331451
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaa 201  Q
    |||||||||||||||||||||||||||| |||||    
T  24331484 atacattattaattgaatgaatctaaaaaataaa 24331451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 36786214 - 36786181
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaat 196  Q
    ||||||||||| ||||||||||||||||||||||    
T  36786214 actatatacatcattaattgaatgaatctaaaat 36786181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 54508228 - 54508187
Alignment:
Q  168 atacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| ||| ||||||||||||||||||||||| |||||||    
T  54508228 atacatcatttattgaatgaatctaaaatataaatttttgct 54508187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 4484135 - 4484095
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||| ||||||||||||||||||||||  ||||||||    
T  4484135 atatacatcattaattgaatgaatctaaaatgcaaagtttt 4484095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 4708615 - 4708655
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||||||||||| ||||||| ||||||||||| ||||    
T  4708615 atatacattattaattaaatgaatttaaaatataaattttt 4708655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 16170971 - 16170931
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  16170971 atatacaccattaattgaatgaatctaaaatgtaaagtttt 16170931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 196
Target Start/End: Complemental strand, 38938100 - 38938072
Alignment:
Q  168 atacattattaattgaatgaatctaaaat 196  Q
    |||||||||||||||||||||||||||||    
T  38938100 atacattattaattgaatgaatctaaaat 38938072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 46803472 - 46803436
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatata 199  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  46803472 actatatacataattaatttaatgaatctaaaatata 46803436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 55416361 - 55416321
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||| ||||||||||||||||| ||||||||| ||||    
T  55416361 atatacatcattaattgaatgaatctcaaatataaattttt 55416321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 10872751 - 10872794
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  10872751 atatacatcattaattgaatgaatctaaaatataaatttttgct 10872794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 22497030 - 22497073
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  22497030 atatacgttattaattgaatgaatctaaaatgtaaagttttgct 22497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 24722766 - 24722809
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  24722766 atatacattattaattgagtgaatctaaaatgtaaagttttgct 24722809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 3648775 - 3648821
Alignment:
Q  163 actatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  3648775 actatatacatcattgattgaatgaatgtaaaatataaagttttgct 3648821  T

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Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 35987510 - 35987551
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttg 207  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  35987510 atatacattattaattgaataaatctaaaatataaaattttg 35987551  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 50466874 - 50466834
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagtttt 206  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  50466874 atatacatcattaattgaatgaatctaaaatataaattttt 50466834  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 29389388 - 29389345
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| |||||||||| |||||||||||||||| |||||||    
T  29389388 atatacatcattaattgaacgaatctaaaatataaatttttgct 29389345  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 47334703 - 47334660
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||    
T  47334703 atatacatcattaattgaatgaatttaaaatacaaagttttgct 47334660  T

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Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 51060724 - 51060681
Alignment:
Q  166 atatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    |||||||||||||||||||| |||||||||| |||| |||||||    
T  51060724 atatacattattaattgaattaatctaaaatgtaaatttttgct 51060681  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 196
Target Start/End: Complemental strand, 26243740 - 26243710
Alignment:
Q  166 atatacattattaattgaatgaatctaaaat 196  Q
    |||||||||||||||||||||||||||||||    
T  26243740 atatacattattaattgaatgaatctaaaat 26243710  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 7601976 - 7601932
Alignment:
Q  165 tatatacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||    
T  7601976 tatatacaccattaattgaatgaatctaaaattcaaagttttgct 7601932  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 45736769 - 45736809
Alignment:
Q  169 tacattattaattgaatgaatctaaaatataaagttttgct 209  Q
    ||||| ||||||||||||||| ||||||||||| |||||||    
T  45736769 tacatcattaattgaatgaatttaaaatataaaattttgct 45736809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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