View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20743_high_5 (Length: 311)
Name: NF20743_high_5
Description: NF20743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20743_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 11 - 261
Target Start/End: Original strand, 244096 - 244346
Alignment:
| Q |
11 |
cataggaggaggacacaagagtaaatcatattcatcatcagtgactccaacaacaagaaggagcaaatcatggcctggtcttccacggggcgaagaaaat |
110 |
Q |
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| T |
244096 |
cataggaggaggacacaagagtaaatcatattcatcatcagtgactccaacaacaagaaggagcaaatcatggcctggtcttccacggggcgaagaaaat |
244195 |
T |
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| Q |
111 |
agacgaaagaaagtggccccggagggatgcttttcggtgtacgttggacctcaaatgcaaaggtttgtgatcaaaactgagtatgctaatcatcctttgt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
244196 |
agacgaaagaaagtggccccggagggatgcttttcggtgtacgttggacctcaaatgcaaaggtttgtgatcaaaactgagtatgctaatcatcctttgt |
244295 |
T |
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| Q |
211 |
tcaagatgttgcttgaagaagctgaatcagaatatggttatagctgccaag |
261 |
Q |
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| T |
244296 |
tcaagatgttgcttgaagaagctgaatcagaatatggttatagctgccaag |
244346 |
T |
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