View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20744_high_16 (Length: 237)

Name: NF20744_high_16
Description: NF20744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20744_high_16
NF20744_high_16
[»] chr5 (33 HSPs)
chr5 (30-155)||(2447734-2447859)
chr5 (158-220)||(18258710-18258772)
chr5 (158-220)||(28306049-28306111)
chr5 (158-219)||(7287106-7287167)
chr5 (162-219)||(14051236-14051293)
chr5 (157-220)||(5168275-5168338)
chr5 (158-220)||(26791161-26791223)
chr5 (158-221)||(13168613-13168676)
chr5 (158-220)||(1764316-1764378)
chr5 (158-220)||(7076485-7076547)
chr5 (158-220)||(33037612-33037674)
chr5 (158-219)||(8686984-8687045)
chr5 (158-221)||(41321346-41321409)
chr5 (158-220)||(14923165-14923227)
chr5 (158-219)||(1671635-1671696)
chr5 (165-220)||(36739040-36739095)
chr5 (157-215)||(17626083-17626141)
chr5 (158-220)||(33958176-33958238)
chr5 (158-219)||(35634752-35634814)
chr5 (170-220)||(35646475-35646525)
chr5 (157-214)||(7552883-7552940)
chr5 (158-219)||(28467370-28467431)
chr5 (158-202)||(3565194-3565238)
chr5 (165-220)||(19844234-19844289)
chr5 (178-220)||(1079889-1079931)
chr5 (158-220)||(1274450-1274511)
chr5 (157-221)||(13309974-13310038)
chr5 (157-220)||(39591772-39591835)
chr5 (157-220)||(39592164-39592227)
chr5 (158-220)||(2972416-2972478)
chr5 (158-219)||(15479562-15479623)
chr5 (172-220)||(18660851-18660899)
chr5 (172-220)||(21156080-21156128)
[»] chr4 (51 HSPs)
chr4 (158-219)||(26732318-26732379)
chr4 (158-220)||(51986134-51986196)
chr4 (159-220)||(10250433-10250494)
chr4 (158-220)||(23369249-23369311)
chr4 (158-220)||(44539826-44539888)
chr4 (157-221)||(39478528-39478592)
chr4 (158-220)||(24575768-24575830)
chr4 (158-219)||(27051003-27051064)
chr4 (158-220)||(26492099-26492161)
chr4 (158-220)||(29175317-29175379)
chr4 (158-220)||(37297141-37297202)
chr4 (158-220)||(43175076-43175138)
chr4 (162-220)||(46213062-46213120)
chr4 (158-220)||(53801676-53801738)
chr4 (170-219)||(29531535-29531584)
chr4 (158-219)||(38134446-38134507)
chr4 (160-220)||(5622550-5622610)
chr4 (165-221)||(38376414-38376470)
chr4 (170-220)||(1627487-1627537)
chr4 (158-220)||(11068780-11068842)
chr4 (158-220)||(15175638-15175700)
chr4 (157-219)||(19473872-19473934)
chr4 (162-220)||(36177998-36178056)
chr4 (157-215)||(38382418-38382476)
chr4 (158-220)||(39440576-39440638)
chr4 (158-220)||(40348886-40348948)
chr4 (158-220)||(42491166-42491228)
chr4 (157-215)||(47181938-47181996)
chr4 (157-215)||(48402113-48402171)
chr4 (162-219)||(26724893-26724950)
chr4 (156-213)||(56363960-56364017)
chr4 (172-220)||(37997346-37997394)
chr4 (171-219)||(49449093-49449141)
chr4 (171-219)||(56474697-56474745)
chr4 (157-220)||(46038755-46038818)
chr4 (170-221)||(46634191-46634242)
chr4 (162-220)||(31641486-31641544)
chr4 (157-215)||(34616658-34616716)
chr4 (158-220)||(42853669-42853731)
chr4 (170-219)||(2268436-2268485)
chr4 (160-221)||(10474031-10474092)
chr4 (157-220)||(2575706-2575769)
chr4 (158-220)||(27965079-27965139)
chr4 (165-220)||(39654916-39654971)
chr4 (157-219)||(27354270-27354332)
chr4 (158-220)||(38380993-38381055)
chr4 (158-220)||(50831672-50831734)
chr4 (170-203)||(42360265-42360298)
chr4 (172-220)||(7632392-7632440)
chr4 (158-198)||(45083086-45083126)
chr4 (172-220)||(50721675-50721723)
[»] scaffold0199 (1 HSPs)
scaffold0199 (158-220)||(8760-8822)
[»] scaffold0056 (1 HSPs)
scaffold0056 (158-220)||(76536-76598)
[»] chr6 (24 HSPs)
chr6 (158-220)||(552885-552947)
chr6 (157-219)||(14818025-14818087)
chr6 (158-220)||(32316845-32316907)
chr6 (158-220)||(33430279-33430341)
chr6 (158-219)||(18737484-18737545)
chr6 (158-220)||(34047479-34047541)
chr6 (158-219)||(31077887-31077948)
chr6 (157-220)||(26595441-26595504)
chr6 (160-220)||(15974700-15974760)
chr6 (157-215)||(16199547-16199605)
chr6 (156-220)||(2241940-2242004)
chr6 (157-220)||(277083-277146)
chr6 (162-221)||(1156811-1156870)
chr6 (157-220)||(22079479-22079542)
chr6 (174-220)||(5080500-5080546)
chr6 (170-220)||(8098526-8098576)
chr6 (157-219)||(30457598-30457660)
chr6 (158-219)||(5694068-5694129)
chr6 (156-220)||(4820459-4820523)
chr6 (157-205)||(5570254-5570302)
chr6 (157-220)||(3853223-3853286)
chr6 (177-220)||(33603216-33603259)
chr6 (178-220)||(24900866-24900908)
chr6 (177-214)||(11612286-11612323)
[»] chr3 (53 HSPs)
chr3 (158-220)||(27541419-27541481)
chr3 (158-220)||(5244321-5244383)
chr3 (158-220)||(20547907-20547969)
chr3 (158-220)||(32924198-32924260)
chr3 (158-220)||(44856045-44856107)
chr3 (158-220)||(52939743-52939805)
chr3 (158-215)||(47472426-47472483)
chr3 (157-220)||(35376997-35377060)
chr3 (158-221)||(37302637-37302700)
chr3 (158-220)||(5114170-5114232)
chr3 (162-220)||(36670935-36670993)
chr3 (158-220)||(42357001-42357063)
chr3 (158-219)||(26014905-26014966)
chr3 (158-219)||(35597255-35597316)
chr3 (162-219)||(46624000-46624057)
chr3 (157-220)||(13348050-13348113)
chr3 (158-220)||(38926720-38926782)
chr3 (162-220)||(41309209-41309267)
chr3 (170-220)||(41505583-41505633)
chr3 (158-220)||(52254055-52254117)
chr3 (157-219)||(52326112-52326174)
chr3 (158-219)||(16969483-16969544)
chr3 (158-219)||(19149083-19149144)
chr3 (175-219)||(45000156-45000200)
chr3 (160-219)||(8847203-8847262)
chr3 (157-220)||(42889077-42889140)
chr3 (165-220)||(49780664-49780719)
chr3 (157-215)||(21217609-21217667)
chr3 (157-215)||(23592555-23592613)
chr3 (158-220)||(33939330-33939392)
chr3 (157-215)||(37056973-37057031)
chr3 (158-216)||(44413312-44413370)
chr3 (160-214)||(44445392-44445446)
chr3 (158-216)||(44813232-44813290)
chr3 (158-219)||(45711356-45711417)
chr3 (158-205)||(13735837-13735884)
chr3 (172-219)||(49087038-49087085)
chr3 (170-213)||(50318318-50318361)
chr3 (157-215)||(25641499-25641557)
chr3 (158-220)||(42358555-42358617)
chr3 (170-220)||(44413851-44413901)
chr3 (168-213)||(33791697-33791742)
chr3 (157-214)||(44383287-44383344)
chr3 (160-219)||(14226624-14226683)
chr3 (158-225)||(46965835-46965902)
chr3 (158-220)||(288818-288880)
chr3 (158-220)||(7668105-7668166)
chr3 (157-202)||(23600703-23600748)
chr3 (162-220)||(37503668-37503726)
chr3 (165-219)||(39630541-39630595)
chr3 (158-220)||(55151634-55151696)
chr3 (158-219)||(24256688-24256749)
chr3 (157-213)||(28539656-28539712)
[»] chr1 (46 HSPs)
chr1 (158-220)||(27464974-27465036)
chr1 (158-220)||(31088273-31088335)
chr1 (160-219)||(23645504-23645563)
chr1 (158-220)||(649861-649923)
chr1 (158-216)||(26469455-26469513)
chr1 (158-220)||(45121398-45121459)
chr1 (158-220)||(52576219-52576281)
chr1 (158-219)||(3851251-3851312)
chr1 (168-220)||(29359729-29359781)
chr1 (158-214)||(37619642-37619698)
chr1 (157-214)||(2571733-2571791)
chr1 (157-219)||(18434888-18434950)
chr1 (158-220)||(35369792-35369854)
chr1 (158-220)||(37274950-37275012)
chr1 (165-219)||(50726172-50726226)
chr1 (158-219)||(33100901-33100962)
chr1 (172-220)||(3159468-3159516)
chr1 (157-220)||(19947660-19947723)
chr1 (157-220)||(49065280-49065343)
chr1 (158-220)||(44519068-44519130)
chr1 (158-220)||(50932396-50932458)
chr1 (158-219)||(19055676-19055737)
chr1 (158-219)||(21401491-21401552)
chr1 (158-199)||(43775319-43775360)
chr1 (157-214)||(48103279-48103336)
chr1 (158-219)||(48470732-48470793)
chr1 (161-221)||(40861182-40861242)
chr1 (157-220)||(9566876-9566939)
chr1 (170-220)||(12657314-12657365)
chr1 (159-221)||(4776847-4776909)
chr1 (158-220)||(8350116-8350177)
chr1 (158-220)||(8828038-8828100)
chr1 (157-219)||(31827044-31827106)
chr1 (158-220)||(51571263-51571325)
chr1 (158-219)||(3981943-3982004)
chr1 (170-219)||(41677253-41677302)
chr1 (171-220)||(44914502-44914551)
chr1 (171-219)||(27533414-27533462)
chr1 (159-215)||(46907292-46907348)
chr1 (165-220)||(45333803-45333858)
chr1 (158-220)||(45640394-45640455)
chr1 (158-220)||(50775073-50775135)
chr1 (159-220)||(48261232-48261293)
chr1 (158-219)||(51718543-51718604)
chr1 (172-220)||(9988044-9988092)
chr1 (175-215)||(24981501-24981541)
[»] chr7 (26 HSPs)
chr7 (160-220)||(44895491-44895551)
chr7 (158-220)||(38956535-38956597)
chr7 (158-219)||(25192834-25192895)
chr7 (158-221)||(3937040-3937103)
chr7 (158-220)||(22918086-22918148)
chr7 (157-220)||(41863545-41863608)
chr7 (170-220)||(38073312-38073362)
chr7 (158-220)||(43025432-43025494)
chr7 (162-220)||(41989661-41989721)
chr7 (160-220)||(40112873-40112933)
chr7 (162-220)||(24614237-24614295)
chr7 (162-220)||(41189464-41189522)
chr7 (157-215)||(46022183-46022241)
chr7 (170-219)||(38861189-38861238)
chr7 (159-220)||(40417866-40417927)
chr7 (158-221)||(41018755-41018818)
chr7 (157-215)||(7701641-7701699)
chr7 (158-220)||(32529773-32529835)
chr7 (174-219)||(42552991-42553036)
chr7 (171-219)||(48062150-48062198)
chr7 (157-196)||(38944913-38944952)
chr7 (162-221)||(44189231-44189290)
chr7 (158-219)||(27473184-27473245)
chr7 (156-221)||(44649243-44649308)
chr7 (158-202)||(43159492-43159536)
chr7 (173-201)||(43942743-43942771)
[»] chr8 (24 HSPs)
chr8 (158-221)||(43397872-43397935)
chr8 (158-220)||(22719532-22719594)
chr8 (157-220)||(11253458-11253521)
chr8 (157-220)||(29025352-29025415)
chr8 (158-220)||(12898846-12898908)
chr8 (158-221)||(34186698-34186761)
chr8 (158-220)||(27325850-27325912)
chr8 (170-220)||(31249453-31249503)
chr8 (165-221)||(32501120-32501176)
chr8 (157-220)||(37133778-37133841)
chr8 (158-220)||(4054203-4054265)
chr8 (162-220)||(37449346-37449404)
chr8 (159-219)||(5740703-5740763)
chr8 (165-220)||(42768296-42768351)
chr8 (158-220)||(7271942-7272004)
chr8 (158-220)||(13106572-13106634)
chr8 (158-220)||(21526197-21526259)
chr8 (170-215)||(5277428-5277473)
chr8 (177-221)||(34639624-34639668)
chr8 (172-219)||(23754637-23754684)
chr8 (170-213)||(36251425-36251468)
chr8 (178-220)||(10902797-10902839)
chr8 (162-220)||(36660371-36660429)
chr8 (171-220)||(10839412-10839461)
[»] chr2 (41 HSPs)
chr2 (158-220)||(18254126-18254188)
chr2 (165-220)||(9207682-9207737)
chr2 (158-220)||(2076661-2076723)
chr2 (158-220)||(6049262-6049324)
chr2 (170-220)||(22416305-22416355)
chr2 (158-220)||(22888734-22888796)
chr2 (158-220)||(42421815-42421877)
chr2 (158-220)||(1248778-1248840)
chr2 (162-220)||(9647224-9647282)
chr2 (158-220)||(34945007-34945069)
chr2 (158-220)||(42091421-42091483)
chr2 (158-220)||(43487471-43487533)
chr2 (170-218)||(17388532-17388580)
chr2 (160-220)||(41195676-41195736)
chr2 (160-219)||(9194334-9194393)
chr2 (158-213)||(9760117-9760172)
chr2 (162-220)||(19633374-19633432)
chr2 (162-220)||(19830275-19830333)
chr2 (157-215)||(41056663-41056721)
chr2 (170-219)||(44287371-44287420)
chr2 (157-221)||(29349597-29349661)
chr2 (165-220)||(7663990-7664045)
chr2 (158-220)||(21611572-21611639)
chr2 (157-220)||(27490646-27490709)
chr2 (170-220)||(6511343-6511393)
chr2 (162-220)||(9990783-9990841)
chr2 (157-215)||(13333086-13333144)
chr2 (157-215)||(25270498-25270556)
chr2 (158-220)||(37737888-37737950)
chr2 (158-220)||(41042346-41042408)
chr2 (172-220)||(1352481-1352529)
chr2 (157-221)||(18846702-18846766)
chr2 (159-219)||(23690426-23690486)
chr2 (158-202)||(32477442-32477486)
chr2 (160-219)||(28494953-28495012)
chr2 (157-199)||(3097777-3097819)
chr2 (178-220)||(7698263-7698305)
chr2 (158-220)||(19109010-19109072)
chr2 (158-195)||(31296655-31296692)
chr2 (171-220)||(44977429-44977478)
chr2 (162-205)||(6639546-6639590)
[»] scaffold0519 (1 HSPs)
scaffold0519 (157-220)||(11874-11937)
[»] scaffold0098 (1 HSPs)
scaffold0098 (158-219)||(49388-49449)
[»] scaffold0067 (1 HSPs)
scaffold0067 (170-220)||(35615-35665)
[»] scaffold0184 (1 HSPs)
scaffold0184 (157-220)||(16705-16767)
[»] scaffold0078 (1 HSPs)
scaffold0078 (157-220)||(56077-56139)
[»] scaffold0041 (1 HSPs)
scaffold0041 (170-219)||(10892-10941)


Alignment Details
Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 2447859 - 2447734
Alignment:
Q  30 caaattttaaccaatgtcatcgtgtttgtgtcagtgtcgtgtatccggtgtcagtgttttggaaaatagtcaatgacaacatgcaatgcaaactccagga 129  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  2447859 caaattttaaccaatgtcaacgtgtttgtatcagtgtcgtgtatccggtgtcagtgttttggaaaatagccaatgacaacatgcaattcaaactccagga 2447760  T
Q  130 acaaaataacatgcaactaacttaac 155  Q
    ||||||||||||||||||||||||||    
T  2447759 acaaaataacatgcaactaacttaac 2447734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 18258710 - 18258772
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18258710 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 18258772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 28306049 - 28306111
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28306049 tgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaagaccaaag 28306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 7287106 - 7287167
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7287106 tgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaa 7287167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 14051236 - 14051293
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14051236 aacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 14051293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 5168338 - 5168275
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  5168338 atgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtggcacaaaaatcaaag 5168275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 26791161 - 26791223
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  26791161 tgacaacttttgtgacaaccaaaattttacaaaggaaatgagttagtggcacaaaaaccaaag 26791223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 13168676 - 13168613
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  13168676 tgacaacttttgtgacaatcaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagt 13168613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 1764378 - 1764316
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  1764378 tgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcataaaaaccaaag 1764316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 7076485 - 7076547
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  7076485 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaagtaatggcacaaaaaccaaag 7076547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 33037674 - 33037612
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  33037674 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaag 33037612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 8687045 - 8686984
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||    
T  8687045 tgacaacttttataacaatcaaaattttacaaagaaaatgaggtattgacacaaaaaccaaa 8686984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 41321409 - 41321346
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||| |||| |||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  41321409 tgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaaccaaagt 41321346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 14923227 - 14923165
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  ||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  14923227 tgacaactttcgtgaaaaccaaaattttacaaaagaaatgaggtagtggcacaaaaaccaaag 14923165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 1671696 - 1671635
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| || |||||||||||||    
T  1671696 tgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtactgacacaaaaaccaaa 1671635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 36739095 - 36739040
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  36739095 ttttgtgacaaccaaaattttacaaaagaaatgaggtagtgacacaaaaaccaaag 36739040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 17626141 - 17626083
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  17626141 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 17626083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 33958176 - 33958238
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||||| || ||||||||||||| ||| || || ||||||||||||||    
T  33958176 tgacaacttttatgacaaccataaatttacaaagaaaaagagatattgacacaaaaaccaaag 33958238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 35634752 - 35634814
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaa-gaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||||| ||||||||||||||||| ||||||||  || ||||||||||||||||    
T  35634752 tgacaacttttatgataaccaaaattttacaaaggaaaatgaattattggcacaaaaaccaaa 35634814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 35646525 - 35646475
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  35646525 tgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 35646475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 7552883 - 7552940
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaa 214  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||| || ||||||||    
T  7552883 atgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaa 7552940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 28467370 - 28467431
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||| |||| ||||||||||||||||| |||| |||||||| |||| |||||||||||||    
T  28467370 tgacaatttttgtgacaaccaaaattttataaaggaaatgaggcagtgacacaaaaaccaaa 28467431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 3565238 - 3565194
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggta 202  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  3565238 tgacaacttttgagacaaccaaaattttacaaagaaaatgaggta 3565194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 19844234 - 19844289
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| |||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  19844234 ttttaagacaaccataattttacaaagaaaaagaggtattggcacacaaaccaaag 19844289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 1079889 - 1079931
Alignment:
Q  178 aaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  1079889 aaaattttacaaagaaaatgaggtattggcacaaaatccaaag 1079931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 1274511 - 1274450
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||| |||||||||||||||||||  |||||| || || ||||||||||||||    
T  1274511 tgacaacttttatg-caaccaaaattttacaaagggaatgagatattgacacaaaaaccaaag 1274450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 13310038 - 13309974
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||| ||||  ||||| |||| ||||||||||||||||||||| |  |||||||||||||||    
T  13310038 atgacaatttttgagacaatcaaatttttacaaagaaaatgaggtattaacacaaaaaccaaagt 13309974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 39591835 - 39591772
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||  | || |||| |||||||||    
T  39591835 atgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaag 39591772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 39592227 - 39592164
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||  | || |||| |||||||||    
T  39592227 atgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaag 39592164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 2972478 - 2972416
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| |||||||| || ||| |||||||||| || |||||||| |||||    
T  2972478 tgacaacttttgtgacaatcaaaatttcacgaaggaaatgaggtattgacacaaaaatcaaag 2972416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 15479623 - 15479562
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||  ||||||||||||| ||||||||||| || || || |||||||    
T  15479623 tgacaacttttgtgacaattaaaattttacaaaaaaaatgaggtattgacaaaataaccaaa 15479562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 18660899 - 18660851
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||| |||| |||||||||| |||||| ||| |||||||||||||||||    
T  18660899 acaatcaaacttttacaaaggaaatgaagtattggcacaaaaaccaaag 18660851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 21156128 - 21156080
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||| |||||||||||||||||||| ||  | |||||||||||||||||    
T  21156128 acaaacaaaattttacaaagaaaataagtgattggcacaaaaaccaaag 21156080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 26732379 - 26732318
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26732379 tgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 26732318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 51986196 - 51986134
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51986196 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 51986134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 10250433 - 10250494
Alignment:
Q  159 gacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10250433 gacaacttttgtgacaaccaaaattttacaaagaaaatgaagtagtggcacaaaaaccaaag 10250494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 23369249 - 23369311
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  23369249 tgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggtagtggcacaaaaaccaaag 23369311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 44539888 - 44539826
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  44539888 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgtcacaaaaaccaaag 44539826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 39478592 - 39478528
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  39478592 atgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagt 39478528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 24575768 - 24575830
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  24575768 tgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaag 24575830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 27051003 - 27051064
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||||||||||||||||||||||||| || || |||||||||||||    
T  27051003 tgacaacttttgtgacaaccaaaattttacaaagaaaatgagatattgacacaaaaaccaaa 27051064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 26492161 - 26492099
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  26492161 tgacaatttttgtgacaatcaaaattttacaaaggaaatgaagtagtggcacaaaaaccaaag 26492099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 29175379 - 29175317
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||| || || ||||||||||||||    
T  29175379 tgacaacttttgtgacaaccaaaattttacaaagtaaatgagctattgacacaaaaaccaaag 29175317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 37297202 - 37297141
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  37297202 tgacaacttttgtgacaaccaaaattttac-aaggaaatgaggtagtgacacaaaaaccaaag 37297141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 43175138 - 43175076
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||| || ||||||||||||||| ||||||||||||| ||||||||||||||    
T  43175138 tgacaacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 43175076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 46213120 - 46213062
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| | |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  46213120 aacttttgtaacaaccaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaag 46213062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 53801676 - 53801738
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||| ||||    
T  53801676 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaactaaag 53801738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 29531535 - 29531584
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  29531535 tgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaa 29531584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 38134507 - 38134446
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||| |||||||||||||||||| |||||||| |||| |||||||||||||    
T  38134507 tgacaacttttgtgataaccaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaa 38134446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5622610 - 5622550
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||| ||| ||| |||||||||||||| |||||||||||| |||||||||||||||    
T  5622610 acaacttttgtgataactaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaag 5622550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 38376414 - 38376470
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  38376414 ttttgtgacaatcaaaattttacaaagaaaatgagatagtggcacaaaaatcaaagt 38376470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 1627487 - 1627537
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||||    
T  1627487 tgacaaccataaatttacaaagaaaatgaggtattggcacaaaaaccaaag 1627537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 11068842 - 11068780
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| || ||||||||||||||||||| |||||||| |||| |||||||| |||||    
T  11068842 tgacaacttttgtggcaaccaaaattttacaaaggaaatgaggcagtgacacaaaaatcaaag 11068780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 15175700 - 15175638
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| | |||||||||||||||||||| |||||||||| | |||||||||| ||||    
T  15175700 tgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattagcacaaaaacaaaag 15175638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 19473872 - 19473934
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||  ||||| |||||||||||||||||||||| ||| || |||||||||||||    
T  19473872 atgacaacttttgagacaatcaaaattttacaaagaaaatgaagtattgacacaaaaaccaaa 19473934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 36178056 - 36177998
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| ||||||| ||||||||| |||| |||||||||||||| |||||||||||||    
T  36178056 aacttttgtgacaactaaaattttataaaggaaatgaggtagtggtacaaaaaccaaag 36177998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 38382476 - 38382418
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  38382476 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 38382418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 39440638 - 39440576
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| |||||||||| |||| ||||||||||||| |||||||| |||||    
T  39440638 tgacaacttttgtgacaatcaaaattttagaaaggaaatgaggtagtgacacaaaaatcaaag 39440576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 40348948 - 40348886
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| |||||||||  |||||||||||| ||||| ||||||||||||||    
T  40348948 tgacaacttttgtgacaatcaaaattttttaaagaaaatgagatagtgacacaaaaaccaaag 40348886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 42491228 - 42491166
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||  |||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  42491228 tgacaacttttgggacaaccataatttcacaaagaaaaagaggtattggcacaaaaaccaaag 42491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 47181996 - 47181938
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  47181996 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 47181938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 48402113 - 48402171
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  48402113 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 48402171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 26724893 - 26724950
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||| | ||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  26724893 aacttttgtaacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaa 26724950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 56363960 - 56364017
Alignment:
Q  156 catgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaa 213  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||    
T  56363960 catgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaa 56364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 37997394 - 37997346
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||    
T  37997394 acaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaag 37997346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 49449093 - 49449141
Alignment:
Q  171 gacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  49449093 gacaatcaaaattttacaaagaaaatgaggtattagcacaaaaaccaaa 49449141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 56474697 - 56474745
Alignment:
Q  171 gacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||    
T  56474697 gacaaccaaaactttacaaagaaaatgaggtattgacacaaaaaccaaa 56474745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 46038818 - 46038755
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||| || || || |||||||||||||||||||| ||  |||||||||||||    
T  46038818 atgacaacttttatgataatcataaatttacaaagaaaatgaggtattgttacaaaaaccaaag 46038755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 46634242 - 46634191
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||| ||||||    
T  46634242 tgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagt 46634191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 31641486 - 31641544
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| ||||||||||||||||| |||| |||| |||||||| |||||||| |||||    
T  31641486 aacttttgtgacaaccaaaattttataaaggaaataaggtagtgacacaaaaatcaaag 31641544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 34616716 - 34616658
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| |||||||||||| || || |||||||||    
T  34616716 atgacaacttttgagacaaccaaaattttataaagaaaatgagatattgacacaaaaac 34616658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 42853731 - 42853669
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| ||||  ||||| |||||||||| ||||||||||||||| || ||||||||||||||    
T  42853731 tgacaatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaaccaaag 42853669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 2268436 - 2268485
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||||||||||||| ||||||| || || |||||||||||||    
T  2268436 tgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaa 2268485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 10474031 - 10474092
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||||||||||||||| || ||||||||||||| || ||| || |||||||| ||||||    
T  10474031 acaacttttatgacaaccataaatttacaaagaaaaagaagtattgacacaaaaatcaaagt 10474092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 2575706 - 2575769
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||  | || |||| |||||||||    
T  2575706 atgacaacttttgtgacaactaaagttttacaaagaaaatgagagattgacacacaaaccaaag 2575769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 27965139 - 27965079
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||| | |||||||||||||||||  | | ||||||||||||| ||||||||||||||    
T  27965139 tgacaacttctgtgacaaccaaaatttta--atggaaatgaggtagtgacacaaaaaccaaag 27965079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 39654971 - 39654916
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| |||||||| || |||||||||||||||||||| || |||||||| |||||    
T  39654971 ttttaagacaaccataaatttacaaagaaaatgaggtattgacacaaaaatcaaag 39654916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 27354270 - 27354332
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||| ||||| |||||||||||||||||||| ||||||| | | ||| ||||||| ||||    
T  27354270 atgacaaattttaagacaaccaaaattttacaaaaaaaatgaaggattggtacaaaaatcaaa 27354332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 38380993 - 38381055
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| |||||||| ||||| | |||||||| |||||| ||| ||||||| |||||    
T  38380993 tgacaacttttaagacaaccataatttcataaagaaaaagaggtattggtacaaaaatcaaag 38381055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 50831672 - 50831734
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||  |||||||| |||||||||||||||| |||||  || |||||||| |||||    
T  50831672 tgacaacttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaag 50831734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 42360298 - 42360265
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtag 203  Q
    |||||||||||||||||||||| |||||||||||    
T  42360298 tgacaaccaaaattttacaaaggaaatgaggtag 42360265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 7632392 - 7632440
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||| ||||||||  | ||||||||||| |||||    
T  7632392 acaaccaaaattttacaaataaaatgagtgattggcacaaaaatcaaag 7632440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 45083126 - 45083086
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatga 198  Q
    ||||||||||||| |||| |||||||||| |||||||||||    
T  45083126 tgacaacttttattacaatcaaaattttataaagaaaatga 45083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 50721675 - 50721723
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| ||||||||||||||||||||||  | || ||||||||||||||    
T  50721675 acaactaaaattttacaaagaaaatgagtgattgacacaaaaaccaaag 50721723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 8822 - 8760
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8822 tgacaacttttatgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 8760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 76536 - 76598
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  76536 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 76598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 552947 - 552885
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  552947 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 552885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 14818087 - 14818025
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  14818087 atgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaaaaccaaa 14818025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 32316845 - 32316907
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  32316845 tgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtactgacacaaaaaccaaag 32316907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 33430279 - 33430341
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  33430279 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 33430341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 18737484 - 18737545
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  18737484 tgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgtcacaaaaaccaaa 18737545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 34047541 - 34047479
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  34047541 tgacaacttttgtgacaaccaaaattttacaaagaaaaagagatattggcacaaaaaccaaag 34047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 31077948 - 31077887
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||| |||||||||||||    
T  31077948 tgacaacttttgtgacaaccaaaattttacaaaggaagtgaggtagtgacacaaaaaccaaa 31077887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 26595504 - 26595441
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||   ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  26595504 atgacaacttttgaaacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaag 26595441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 15974760 - 15974700
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||  ||||||||||||||    
T  15974760 acaacttttgtgacaaccaaaattttacaaaggaaatgaagtagtaacacaaaaaccaaag 15974700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 16199605 - 16199547
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  16199605 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 16199547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 2241940 - 2242004
Alignment:
Q  156 catgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| ||||||| |||||||||||||  |||||||||||||||| | || ||||||||||||||    
T  2241940 catgataacttttgtgacaaccaaaataatacaaagaaaatgaggcattgacacaaaaaccaaag 2242004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 277146 - 277083
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||| |||||||||||||||||||||||||||||  || || |||||||| |||||    
T  277146 atgacaatttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaag 277083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 1156870 - 1156811
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||| |||||| |||||||||  |||| ||||||| |||||||||||||||||||||    
T  1156870 aacttttgtgacaatcaaaattttgtaaaggaaatgagatagtggcacaaaaaccaaagt 1156811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 22079479 - 22079542
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| |||||| |||||||||||||||| |||||||||||| ||| || |||||||| |||||    
T  22079479 atgaccacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaaag 22079542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 5080500 - 5080546
Alignment:
Q  174 aaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  5080500 aaccaaaattttacaaaggaaatgaggtagtgacacaaaaactaaag 5080546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 8098526 - 8098576
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||| |||| |||| |||||||| ||||||||||||||    
T  8098526 tgacaaccaaaattttagaaaggaaataaggtagtgacacaaaaaccaaag 8098576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 30457660 - 30457598
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||  || ||||||||||| ||| ||||||||||||| || |||||||||||||    
T  30457660 atgacaacttttgagataaccaaaatttcacatagaaaatgaggtattgacacaaaaaccaaa 30457598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 5694068 - 5694129
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||  ||||||| ||||||||||||| |||||||||| || |||||||| ||||    
T  5694068 tgacaacttttgagacaacctaaattttacaaaggaaatgaggtattgacacaaaaatcaaa 5694129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 4820523 - 4820459
Alignment:
Q  156 catgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| |||||||  ||||| |||||||||||||||||||||||| | || |||||||| |||||    
T  4820523 catgataacttttgagacaatcaaaattttacaaagaaaatgaggcattgacacaaaaatcaaag 4820459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 5570254 - 5570302
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtg 205  Q
    |||||||||||||||||||  |||||||||||||| ||||||| |||||    
T  5570254 atgacaacttttatgacaattaaaattttacaaaggaaatgagatagtg 5570302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 3853223 - 3853286
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||  |||||| || ||||||||||||||||||| || || |||||||| |||||    
T  3853223 atgacaacttttgagacaacaaagattttacaaagaaaatgagatattgacacaaaaatcaaag 3853286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 33603216 - 33603259
Alignment:
Q  177 caaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||||||||||| || |||||||| |||||    
T  33603216 caaaattttacaaagaaaatgaggtattgacacaaaaatcaaag 33603259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 24900908 - 24900866
Alignment:
Q  178 aaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||||||  | |||||||||||||||||    
T  24900908 aaaattttacaaagaaaatgagtgattggcacaaaaaccaaag 24900866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 11612323 - 11612286
Alignment:
Q  177 caaaattttacaaagaaaatgaggtagtggcacaaaaa 214  Q
    |||||||||||||||||||||||||| | |||||||||    
T  11612323 caaaattttacaaagaaaatgaggtatttgcacaaaaa 11612286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 27541419 - 27541481
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27541419 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 27541481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 5244383 - 5244321
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5244383 tgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 5244321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 20547907 - 20547969
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  20547907 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaag 20547969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 32924198 - 32924260
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  32924198 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 32924260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 44856107 - 44856045
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  44856107 tgacaacttgtatgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaag 44856045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 52939805 - 52939743
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52939805 tgacaactttcgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 52939743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 47472483 - 47472426
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  47472483 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaac 47472426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 35376997 - 35377060
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  35376997 atgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtattggcacaaaaatcaaag 35377060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 37302700 - 37302637
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  37302700 tgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtggcacaaaaaccaaagt 37302637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 5114232 - 5114170
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  5114232 tgacaatttttatgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaag 5114170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 36670935 - 36670993
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  36670935 aacttttgtgacaaccaaaattttacaaatgaaatgaggtagtggcacaaaaaccaaag 36670993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 42357001 - 42357063
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  42357001 tgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 42357063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 26014966 - 26014905
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  26014966 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaagggcacaaaaaccaaa 26014905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 35597316 - 35597255
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  35597316 tgacaacttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaa 35597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 46624057 - 46624000
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  46624057 aacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaa 46624000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 13348050 - 13348113
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  13348050 atgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgatacaaaaaccaaag 13348113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 38926782 - 38926720
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  |||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  38926782 tgacaactttcgtgacaaccaaaattttacaaaggaaataaggtagtgacacaaaaaccaaag 38926720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 41309267 - 41309209
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  41309267 aacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaag 41309209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 41505633 - 41505583
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  41505633 tgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 41505583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 52254055 - 52254117
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| ||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  52254055 tgacaatttttgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 52254117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 52326174 - 52326112
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  52326174 atgacaacttttatgacaatcaaaattttacaaaggaaatgaggtaagtgcacaaaaaccaaa 52326112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 16969483 - 16969544
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||| ||||    
T  16969483 tgacaacttttgtgacaactaaaattttacaaaggaaatgaggtagtggcataaaaatcaaa 16969544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 19149144 - 19149083
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||| |||| |||||| ||||||||||||||| ||||||| |||||||||||||||||||    
T  19149144 tgacaatttttgtgacaatcaaaattttacaaaggaaatgagttagtggcacaaaaaccaaa 19149083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 45000200 - 45000156
Alignment:
Q  175 accaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  45000200 accaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaa 45000156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 8847262 - 8847203
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||| ||| || |||||||||||||| ||||||||||| ||||||||||||||||    
T  8847262 acaacttttgtgataatcaaaattttacaaataaaatgaggtattggcacaaaaaccaaa 8847203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 42889140 - 42889077
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||   | |||||||||||||||||||||||||| || |||||||||||||||||    
T  42889140 atgacaacttttgatataaccaaaattttacaaagaaaatgagttattggcacaaaaaccaaag 42889077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 49780664 - 49780719
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||| || ||||||||||||| |||||| |||||||||||||||||    
T  49780664 ttttatgacaaccataaatttacaaagaaaaggaggtattggcacaaaaaccaaag 49780719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 21217667 - 21217609
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  21217667 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 21217609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 23592613 - 23592555
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  23592613 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 23592555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 33939392 - 33939330
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||| | ||||| |||||| |||||| ||||||||||||||    
T  33939392 tgacaacttttgtgacaaccaaaattattcaaaggaaatgaagtagtgacacaaaaaccaaag 33939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 37056973 - 37057031
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||| || |||||||||    
T  37056973 atgacaacttttgagacaaccaatattttacaaagaaaatgaggtattgacacaaaaac 37057031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 44413312 - 44413370
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaacc 216  Q
    ||||||||||| ||||||  |||||||||||||| |||||||||| |||||||||||||    
T  44413312 tgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattggcacaaaaacc 44413370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 44445446 - 44445392
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaa 214  Q
    ||||||||||||||||||||||||||| |||||||||||| || | |||||||||    
T  44445446 acaacttttatgacaaccaaaattttataaagaaaatgagatatttgcacaaaaa 44445392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 44813290 - 44813232
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaacc 216  Q
    ||||||||||| || ||| ||||||||||||||| |||| |||||||||||||||||||    
T  44813290 tgacaacttttgtggcaatcaaaattttacaaaggaaattaggtagtggcacaaaaacc 44813232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 45711356 - 45711417
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||| || ||||| |||||||    
T  45711356 tgacaacttttgtaacaaccaaaattttacaaagaaaatgaagtattgacacaataaccaaa 45711417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 13735884 - 13735837
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtg 205  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  13735884 tgacaacttttgtgacaaccaaaattttgcaaaggaaatgaggtagtg 13735837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 49087038 - 49087085
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||    
T  49087038 acaaccaaaatttttcaaagaaaatgaggtattgacacaaaaaccaaa 49087085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 50318318 - 50318361
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaa 213  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  50318318 tgacaaccaaaattttacaaaggaaatgagatagtggcacaaaa 50318361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 25641499 - 25641557
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  25641499 atgacaacttttgagacaaccaaagttttacatagaaaataaggtattggcacaaaaac 25641557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 42358555 - 42358617
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| ||||||||| ||||| |||||||||| || |||||||| |||||    
T  42358555 tgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtattgacacaaaaatcaaag 42358617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 44413851 - 44413901
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| ||||||||||||||||||||||| || || ||||||||||||||    
T  44413851 tgacaatcaaaattttacaaagaaaatgagatattgacacaaaaaccaaag 44413901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 33791697 - 33791742
Alignment:
Q  168 tatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaa 213  Q
    ||||||||||||||||| ||||||||||||||||| || |||||||    
T  33791697 tatgacaaccaaaatttcacaaagaaaatgaggtattgacacaaaa 33791742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 44383344 - 44383287
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaa 214  Q
    ||||||||||||  ||||| |||||||||| ||||||||||||||| || ||||||||    
T  44383344 atgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaa 44383287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 14226624 - 14226683
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||| ||||| ||||| ||||||||||||||||||||||  || || |||||||||||||    
T  14226624 acaatttttaagacaatcaaaattttacaaagaaaatgaaatattgacacaaaaaccaaa 14226683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 46965835 - 46965902
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagtgatg 225  Q
    |||||||||||| |||||||| || |||||||||||||  ||||| || ||||||||| |||| ||||    
T  46965835 tgacaacttttaggacaaccataaatttacaaagaaaagtaggtattgacacaaaaactaaagagatg 46965902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 288880 - 288818
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||| || | |||| ||||||||||||||  ||||||| ||||| ||||||||||||||    
T  288880 tgacaactattgtaacaatcaaaattttacaaaagaaatgagatagtgacacaaaaaccaaag 288818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 7668105 - 7668166
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||| | ||| |||| || |||||||| |||||||||||    
T  7668105 tgacaacttttgtgacaaccaaaattttgc-aaggaaataagatagtggcataaaaaccaaag 7668166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 23600748 - 23600703
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggta 202  Q
    ||||||||||||  |||||||||||||||| ||||||||||| |||    
T  23600748 atgacaacttttgagacaaccaaaattttataaagaaaatgangta 23600703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 37503668 - 37503726
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||||||||||||| ||||| ||||||| || || |||||||| |||||    
T  37503668 aacttttgtgacaaccaaaattttgcaaaggaaatgagatattgacacaaaaatcaaag 37503726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 39630541 - 39630595
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||| ||||| |||||||||||||||||||| ||||  | ||||||||||||||    
T  39630541 ttttaagacaatcaaaattttacaaagaaaattaggtgttagcacaaaaaccaaa 39630595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 55151634 - 55151696
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| | ||||  |||||||||||||| |||||| ||| || ||||||||||||||    
T  55151634 tgacaacttttgttacaattaaaattttacaaaggaaatgaagtattgacacaaaaaccaaag 55151696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 24256688 - 24256749
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||  |||||||||||||| |||||||||| ||  ||||||| ||||    
T  24256688 tgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattgatacaaaaatcaaa 24256749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 28539656 - 28539712
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaa 213  Q
    |||| ||||||| ||| |||||||||||| |||||||||||| ||  ||||||||||    
T  28539656 atgataacttttgtgataaccaaaattttgcaaagaaaatgatgttttggcacaaaa 28539712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 27464974 - 27465036
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27464974 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 27465036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 31088335 - 31088273
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31088335 tgacaacttttgtgacaaccaaaattttacaaaaaaaatgaggtagtggcacaaaaaccaaag 31088273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 23645563 - 23645504
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23645563 acaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaa 23645504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 649923 - 649861
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  649923 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 649861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 26469513 - 26469455
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaacc 216  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26469513 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaacc 26469455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 45121398 - 45121459
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  45121398 tgacaacttttgtgacaaccaaaattttacaaaggaaatga-gtagtggcacaaaaaccaaag 45121459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 52576219 - 52576281
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  52576219 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaccggcacaaaaaccaaag 52576281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 3851312 - 3851251
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||||||    
T  3851312 tgacaacttttatgacaaccaaaattttataaaggaaatgaggtagtgacagaaaaaccaaa 3851251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 29359781 - 29359729
Alignment:
Q  168 tatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  29359781 tatgacaaccaaaattttacaaagaaaatgatgtaatggcacaaaaaccaaag 29359729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 37619698 - 37619642
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaa 214  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  37619698 tgacaacttttattacaaccaaaattttacaaaggaaatgaggtattggcacaaaaa 37619642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 2571791 - 2571733
Alignment:
Q  157 atgacaacttttatgacaaccaaaatttt-acaaagaaaatgaggtagtggcacaaaaa 214  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  2571791 atgacaacttttgtgacaaccaaaattttaacaaagaaaatgaggtagtgacacaaaaa 2571733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 18434950 - 18434888
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||| ||||    
T  18434950 atgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattggcacaaaaatcaaa 18434888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 35369854 - 35369792
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||| |||||||| |||||    
T  35369854 tgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaag 35369792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 37274950 - 37275012
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| ||||||||| ||||| ||||||||||||| ||||||||||||||    
T  37274950 tgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaag 37275012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 50726172 - 50726226
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  50726172 ttttgtgacaaccaaaattttgcaaagaaaatgaggtagtggcacaaaaatcaaa 50726226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 33100962 - 33100901
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||| |||||||| ||||    
T  33100962 tgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaa 33100901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 3159516 - 3159468
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  3159516 acaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacaaaag 3159468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 19947660 - 19947723
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||  |||||||||||||||| |||||||| |||||| ||| |||||||||||||    
T  19947660 atgacaacttttgagacaaccaaaattttataaagaaaaggaggtattgggacaaaaaccaaag 19947723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 49065280 - 49065343
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| ||| | || ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  49065280 atgacaattttaaagataaccaaaattttacaaagaaaatgaagtattggcacaaaaaccaaag 49065343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 44519068 - 44519130
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| | ||||||||| |||||    
T  44519068 tgacaacttttgtgataaccaaaattttacaaaggaaatgaggtattagcacaaaaatcaaag 44519130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 50932458 - 50932396
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| | |||||||||||||||||||| |||||||||| || |||||||| |||||    
T  50932458 tgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattgacacaaaaatcaaag 50932396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 19055676 - 19055737
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||| |||||||||||||| ||||||| || || |||||||||||||    
T  19055676 tgacaacttttgtgacaactaaaattttacaaaggaaatgagatattgtcacaaaaaccaaa 19055737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 21401552 - 21401491
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||   |||| |||||||||||||||||||||||||| || |||||||||||||    
T  21401552 tgacaacttttgaaacaatcaaaattttacaaagaaaatgaggtattgacacaaaaaccaaa 21401491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 43775360 - 43775319
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgag 199  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  43775360 tgacaacttttatgacaatcaaaattttacaaagaaaatgag 43775319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 48103279 - 48103336
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaa 214  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||| ||||| |||||    
T  48103279 atgacaacttttgagacaaccaaaattttacaaagaaaataaggtattggcaaaaaaa 48103336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 48470793 - 48470732
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| || ||||||| ||||||||    
T  48470793 tgacaacttttgtgacaatcaaaattttacaaaggaaatgagatattggcacagaaaccaaa 48470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 40861182 - 40861242
Alignment:
Q  161 caacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||||| ||||||| ||||||||| |||| |||| || |||||||||||||||||||||    
T  40861182 caacttttgtgacaactaaaattttataaaggaaataagatagtggcacaaaaaccaaagt 40861242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 9566876 - 9566939
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||  |||||||||||||||||| |||||||  |||| || ||||||||||||||    
T  9566876 atgacaacttttgagacaaccaaaattttacatagaaaatagggtattgacacaaaaaccaaag 9566939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 12657365 - 12657314
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtgg-cacaaaaaccaaag 220  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  12657365 tgacaaccaaaattttataaaggaaatgaggtagtggacacaaaaaccaaag 12657314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 4776909 - 4776847
Alignment:
Q  159 gacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||||||| ||||||   |||||||| |||| |||||||||||||||||||||| ||||||    
T  4776909 gacaacttttgtgacaatttaaattttataaaggaaatgaggtagtggcacaaaaatcaaagt 4776847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 8350116 - 8350177
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  ||||||||||||||| |||||| |||| |||||||| ||||||||||||||    
T  8350116 tgacaactttcgtgacaaccaaaattt-acaaaggaaataaggtagtgacacaaaaaccaaag 8350177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 8828038 - 8828100
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| ||||  |||||||||||||||| |||  |||||||||| |||||||||||||||||    
T  8828038 tgacaatttttgcgacaaccaaaattttataaaagaaatgaggtattggcacaaaaaccaaag 8828100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 31827106 - 31827044
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||   ||||||||||||||||||| |||||||| || || |||||||||||||    
T  31827106 atgacaacttttgatacaaccaaaattttacaaaaaaaatgagttattgacacaaaaaccaaa 31827044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 51571263 - 51571325
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| ||||  |||||||| |||||||||||||||| |||||| || ||||||||||||||    
T  51571263 tgacaatttttgggacaaccataattttacaaagaaaaagaggtattgacacaaaaaccaaag 51571325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 3981943 - 3982004
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||| ||| |||||| ||||||||||||||||||||||| || || ||||| |||||||    
T  3981943 tgacaacatttgtgacaatcaaaattttacaaagaaaatgagatattgacacaataaccaaa 3982004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 41677253 - 41677302
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||| ||||||||| ||| ||||||||||||| ||||||||||||||    
T  41677253 tgacaactaaaattttataaataaaatgaggtagttgcacaaaaaccaaa 41677302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 44914502 - 44914551
Alignment:
Q  171 gacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  44914502 gacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaactaaag 44914551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 27533414 - 27533462
Alignment:
Q  171 gacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||||||||||||||||||||||| || || ||||| ||||    
T  27533414 gacaaccaaaattttacaaagaaaatgaggtattgacataaaaatcaaa 27533462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 46907348 - 46907292
Alignment:
Q  159 gacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||  ||||| |||||||||| ||||||||||||||| || |||||||||    
T  46907348 gacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaac 46907292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 45333858 - 45333803
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||| ||||||  |||||||||||||| ||||||||||||| |||||||| |||||    
T  45333858 ttttgtgacaattaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaag 45333803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 45640455 - 45640394
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |  ||||||||||||||||||| ||||||| || ||||||||||| |||||    
T  45640455 tgacaacttttgttgcaaccaaaattttacaaag-aaatgagatattggcacaaaaatcaaag 45640394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 50775073 - 50775135
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| ||||||||| |||||||||||||||| || ||  || ||||||||||||||    
T  50775073 tgacaaattttgtgacaaccataattttacaaagaaaaagatgtgttgacacaaaaaccaaag 50775135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 48261293 - 48261232
Alignment:
Q  159 gacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  ||||| || | |||||||||| ||| |||||| |||||||||||||||||    
T  48261293 gacaacttttgagacaatcatatttttacaaaggaaaagaggtattggcacaaaaaccaaag 48261232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 51718543 - 51718604
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||| ||| |||| ||||||||| |||||| |||||| |||||||| ||||    
T  51718543 tgacaacttttgtgataactaaaactttacaaaggaaatgaagtagtgacacaaaaatcaaa 51718604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 9988092 - 9988044
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||| ||||||||  | ||||||||||| |||||    
T  9988092 acaaccaaaattttacaaataaaatgagtgattggcacaaaaatcaaag 9988044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 24981501 - 24981541
Alignment:
Q  175 accaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    |||||||||||| ||||||||||||||| || |||||||||    
T  24981501 accaaaattttataaagaaaatgaggtattgacacaaaaac 24981541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 44895491 - 44895551
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44895491 acaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 44895551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 38956535 - 38956597
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  38956535 tgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaacaaag 38956597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 25192834 - 25192895
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  25192834 tgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaa 25192895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 3937040 - 3937103
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  3937040 tgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagt 3937103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 22918086 - 22918148
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  22918086 tgacaacttttgcgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 22918148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 41863545 - 41863608
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||    
T  41863545 atgacaacttttaagacaatcaaaattttacaaataaaatgaggtattggcacaaaaaacaaag 41863608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 38073362 - 38073312
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  38073362 tgacaaccaaaattttacaaaggaaatgaggtattggcacaaaaaccaaag 38073312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 43025494 - 43025432
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| | ||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  43025494 tgacaacttttgtaacaactaaaattttacaaaggaaatgagatagtggcacaaaaaccaaag 43025432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 41989661 - 41989721
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaa--tgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  41989661 aacttttgtgacaaccaaaattttacaaaaaaaaaatgaggtagtggcacaaaaaccaaag 41989721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 40112873 - 40112933
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| | |||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  40112873 acaacttctctgacaatcaaaattttacaaaggaaataaggtagtggcacaaaaaccaaag 40112933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 24614237 - 24614295
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| ||| || ||||||||||||||| ||||||||||||| ||||||||||||||    
T  24614237 aacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 24614295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 41189464 - 41189522
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||| ||||||||||||||| |||||||||| || ||||||||| ||||    
T  41189464 aacttttatgacaatcaaaattttacaaaggaaatgaggtattgacacaaaaactaaag 41189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 46022183 - 46022241
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  46022183 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 46022241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 38861238 - 38861189
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  38861238 tgacaatcaaaattttacaaagtaaataaggtagtggcacaaaaaccaaa 38861189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 40417927 - 40417866
Alignment:
Q  159 gacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  |||||||||||||||||||||||| ||||||| || || |||||||||||    
T  40417927 gacaacttttgagacaaccaaaattttacaaagaaagtgaggtattgacataaaaaccaaag 40417866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 41018818 - 41018755
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||||||||||||||| || || ||||||||||||| |||||| |  |||||||||||||||    
T  41018818 tgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaacacaaaaaccaaagt 41018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 7701699 - 7701641
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||| ||||| ||||||||||||||| || |||||||||    
T  7701699 atgacaacttttgagacaaccaaagttttataaagaaaatgaggtattgacacaaaaac 7701641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 32529773 - 32529835
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| |||||| ||||||||||||||| |||||||||||||  | |||||||||||    
T  32529773 tgacaatttttgtgacaatcaaaattttacaaaggaaatgaggtagtgataaaaaaaccaaag 32529835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 42553036 - 42552991
Alignment:
Q  174 aaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  42553036 aaccataattttacaaagaaaaagaggtattggcacaaaaaccaaa 42552991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 48062198 - 48062150
Alignment:
Q  171 gacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  48062198 gacaatcaaaattttataaagaaaatgaggtattgacacaaaaaccaaa 48062150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 38944952 - 38944913
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaat 196  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  38944952 atgacaacttttaagacaatcaaaattttacaaagaaaat 38944913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 44189231 - 44189290
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||| |||||| ||||| ||| ||||| ||||||| ||||| |||||||||||||||    
T  44189231 aacttttgtgacaatcaaaaattttcaaaggaaatgagttagtgacacaaaaaccaaagt 44189290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 27473245 - 27473184
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||| |||| |||||||| |||||||||||||||| || ||| || ||| |||||||||    
T  27473245 tgacaacatttaggacaaccataattttacaaagaaaaagaagtattgacaccaaaaccaaa 27473184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 44649243 - 44649308
Alignment:
Q  156 catgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||||||||||  |||||| ||||||||| ||||||||| |  || || |||||||||||||||    
T  44649243 catgacaacttttgagacaactaaaattttataaagaaaattaaatattgacacaaaaaccaaagt 44649308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 43159492 - 43159536
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggta 202  Q
    |||||||||| |||||||||| || ||||||||||||| ||||||    
T  43159492 tgacaactttgatgacaaccataaatttacaaagaaaaagaggta 43159536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 43942771 - 43942743
Alignment:
Q  173 caaccaaaattttacaaagaaaatgaggt 201  Q
    |||||||||||||||||||||||||||||    
T  43942771 caaccaaaattttacaaagaaaatgaggt 43942743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 43397935 - 43397872
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43397935 tgacagcttttgtgacaaccaaaattttacaaagaaaatgagatagtggcacaaaaaccaaagt 43397872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 22719594 - 22719532
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22719594 tgacaacttttgtgataaccaaaattttacaaagaaaatgaggtagttgcacaaaaaccaaag 22719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 11253458 - 11253521
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  11253458 atgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaag 11253521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 29025415 - 29025352
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  29025415 atgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaag 29025352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 12898846 - 12898908
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  12898846 tgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcgcaaaaaccaaag 12898908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 34186761 - 34186698
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||||||| |||||| ||||||||| ||||| ||||||||||||| |||||||||||||||    
T  34186761 tgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagt 34186698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 27325912 - 27325850
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  ||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  27325912 tgacaactttcgtgataatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 27325850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 31249453 - 31249503
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  31249453 tgacaaccaaaattttacaaaggaaatgaggtagtggtacaaaaaccaaag 31249503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 32501120 - 32501176
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  32501120 ttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagt 32501176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 37133778 - 37133841
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| |||||||||||||||||||||||||||||  || || |||||||| |||||    
T  37133778 atgacaacttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaag 37133841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 4054203 - 4054265
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| ||||| ||||||||  ||||||||||||| ||||||||||||||    
T  4054203 tgacaacttttgtgacaatcaaaactttacaaatgaaatgaggtagtgacacaaaaaccaaag 4054265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 37449346 - 37449404
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| ||| || ||||||||||||||| |||||||||||| |||||||||||||||    
T  37449346 aacttttgtgataatcaaaattttacaaaggaaatgaggtagtagcacaaaaaccaaag 37449404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 5740703 - 5740763
Alignment:
Q  159 gacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||  | |||||||||||||    
T  5740703 gacaacttttaggacaaccataattttacaaagaaaaagaggtatcgacacaaaaaccaaa 5740763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 42768351 - 42768296
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||| ||||||| |||||||||||||| |||||||| |||| ||||||||||||||    
T  42768351 ttttgtgacaactaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaag 42768296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 7272004 - 7271942
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| ||||||||| ||||  ||||||| ||||| ||||||||||||||    
T  7272004 tgacaacttttgtgacaatcaaaattttgcaaaagaaatgagatagtgacacaaaaaccaaag 7271942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 13106634 - 13106572
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||| ||||||| || ||||||||||||| |||||| || |||||||| |||||    
T  13106634 tgacaacttttataacaaccataaatttacaaagaaaaagaggtattgacacaaaaagcaaag 13106572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 21526197 - 21526259
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||  |||||||| ||||| |||||||||| |||||| |||||||||| ||||||    
T  21526197 tgacaacttttgggacaaccataatttcacaaagaaaaagaggtattggcacaaaatccaaag 21526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 5277428 - 5277473
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||    
T  5277428 tgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaac 5277473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 34639668 - 34639624
Alignment:
Q  177 caaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||    
T  34639668 caaaattttacaaataaaatgaggtagtgacacaataaccaaagt 34639624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 23754637 - 23754684
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||||||||||||||||||||  | || |||||||||||||    
T  23754637 acaaccaaaattttacaaagaaaatgagtgattgacacaaaaaccaaa 23754684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 36251468 - 36251425
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaa 213  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||    
T  36251468 tgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaa 36251425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 10902839 - 10902797
Alignment:
Q  178 aaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||    
T  10902839 aaaattttacaaagaaaatgatgtattggcacaaaaatcaaag 10902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 36660371 - 36660429
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||| |||||||||| ||||||||||| ||| || ||||| ||||||||    
T  36660371 aacttttgtgacaatcaaaattttataaagaaaatgaagtattgacacaataaccaaag 36660429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 10839412 - 10839461
Alignment:
Q  171 gacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||    
T  10839412 gacaactaaaattttacaaagaaaattaaatattggcacaaaaaccaaag 10839461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 18254126 - 18254188
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  18254126 tgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaaaccaaag 18254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 9207737 - 9207682
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9207737 ttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 9207682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 2076723 - 2076661
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  2076723 tgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaag 2076661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 6049262 - 6049324
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  6049262 tgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaag 6049324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 22416355 - 22416305
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22416355 tgacaaccaaaattttacaaagaaaatgaggcagtggcacaaaaaccaaag 22416305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 22888734 - 22888796
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  22888734 tgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaag 22888796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 42421815 - 42421877
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  42421815 tgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaacaccaaag 42421877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 1248840 - 1248778
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||| ||  |||||||||||||| ||||||||||||||||||||||||||||    
T  1248840 tgacaacttttgtgataattaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaag 1248778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 9647282 - 9647224
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  9647282 aacttttgtgacaaccaaaattttacaaaggaaatgaagtagtgacacaaaaaccaaag 9647224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 34945007 - 34945069
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||  |||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  34945007 tgacaactttcgtgacaaccaaaattttacaaaagaaatgaggtagtggcacaaaaatcaaag 34945069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 42091421 - 42091483
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  42091421 tgacaatttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaag 42091483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 43487533 - 43487471
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||| | |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  43487533 tgacaatttttgtaacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaag 43487471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 17388532 - 17388580
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaa 218  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  17388532 tgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaa 17388580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 41195736 - 41195676
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||| |||||||||||||||||||||| ||||||| || || ||||||||||||||    
T  41195736 acaacttttgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaag 41195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 9194393 - 9194334
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||| |||| |||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  9194393 acaatttttgtgacaaccaaaattttacaaaagaaatgaggtaatggcacaaaaaccaaa 9194334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 9760172 - 9760117
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaa 213  Q
    ||||||||||| |||||||||||||||| | ||| |||||||||||||||||||||    
T  9760172 tgacaacttttgtgacaaccaaaatttttccaaggaaatgaggtagtggcacaaaa 9760117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 19633432 - 19633374
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||  |||||||||||||    
T  19633432 aacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaag 19633374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 19830333 - 19830275
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||  |||||||||||||    
T  19830333 aacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaag 19830275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 41056663 - 41056721
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| || |||||||||    
T  41056663 atgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 41056721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 44287371 - 44287420
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  44287371 tgacaaccaaaattttacaaaggaaatgaggttgtggcacaataaccaaa 44287420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 29349661 - 29349597
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    |||||||||||| |||||| |||||||||||||||||||| | |||  |||||||||| ||||||    
T  29349661 atgacaacttttgtgacaatcaaaattttacaaagaaaataatgtatcggcacaaaaatcaaagt 29349597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 7663990 - 7664045
Alignment:
Q  165 ttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||| || ||||||||||||| |||||| || ||||||||||||||    
T  7663990 ttttatgacaaccataaatttacaaagaaaaagaggtattgacacaaaaaccaaag 7664045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 21611572 - 21611639
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaa-----tgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||||||||||||||||||||||  |||     ||||||||||||||||||| |||||    
T  21611572 tgacaacttttatgacaaccaaaattttacaaatgaaataaggtgaggtagtggcacaaaaatcaaag 21611639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 27490646 - 27490709
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| |||||| |||||||||||||||||||||| ||| |  |||||||| |||||    
T  27490646 atgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaacacaaaaatcaaag 27490709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 6511393 - 6511343
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||||||||| |||| ||||||||||||| ||||||||||||||    
T  6511393 tgacaatcaaaattttataaaggaaatgaggtagtgacacaaaaaccaaag 6511343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 9990841 - 9990783
Alignment:
Q  162 aacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||| ||||||  |||||||||||||| |||||| ||||||| |||||||||||||    
T  9990841 aacttttgtgacaattaaaattttacaaaggaaatgaagtagtggtacaaaaaccaaag 9990783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 13333086 - 13333144
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    ||||||||||||  |||||||||||||||| ||||||||||| ||| || |||||||||    
T  13333086 atgacaacttttgagacaaccaaaattttataaagaaaatgatgtattgacacaaaaac 13333144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 25270498 - 25270556
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaac 215  Q
    |||||||||||   |||||||||||||||| ||||||||||||||| || |||||||||    
T  25270498 atgacaactttcgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaac 25270556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 37737888 - 37737950
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| |||||||||||| ||||||||| ||||||| || || |||||||| |||||    
T  37737888 tgacaacttttgtgacaaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaag 37737950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 41042408 - 41042346
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| |||||||||||||||||||||| |||| ||||||| || || || |||||||||||    
T  41042408 tgacaatttttatgacaaccaaaattttataaaggaaatgagatattgacataaaaaccaaag 41042346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 1352529 - 1352481
Alignment:
Q  172 acaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||| ||||||||||||||||||||||  | |||||||||||||||||    
T  1352529 acaactaaaattttacaaagaaaatgagtgattggcacaaaaaccaaag 1352481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 18846766 - 18846702
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaagt 221  Q
    ||||||| ||||||||||| ||||||||| |||| ||||||| ||| ||| ||||||| ||||||    
T  18846766 atgacaatttttatgacaatcaaaattttgcaaaaaaaatgatgtattggtacaaaaatcaaagt 18846702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 23690426 - 23690486
Alignment:
Q  159 gacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| |||||||| | |||||||||| ||| |||||| || |||||||||||||    
T  23690426 gacaacttttaagacaaccatatttttacaaaggaaaagaggtattgacacaaaaaccaaa 23690486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 32477486 - 32477442
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggta 202  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||    
T  32477486 tgacaacttttgtgacaaccaaaatttgacaaaggaaatgaggta 32477442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 28495012 - 28494953
Alignment:
Q  160 acaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||| ||||||||| || |||||| ||||||| ||||| || |||||||||||||    
T  28495012 acaacttttgtgacaaccataaatttacacagaaaattaggtattgacacaaaaaccaaa 28494953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 3097777 - 3097819
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgag 199  Q
    ||||||||||||  |||||||||||||||| ||||||||||||    
T  3097777 atgacaacttttgagacaaccaaaattttataaagaaaatgag 3097819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 7698305 - 7698263
Alignment:
Q  178 aaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||||| |||| ||||||||||||||||| |||||    
T  7698305 aaaattttacaaaggaaattaggtagtggcacaaaaatcaaag 7698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 19109010 - 19109072
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||| ||||||| ||  |||| ||||| |||||| ||||||||||||||| |||||    
T  19109010 tgacaacttttgtgacaacaaattttttgcaaaggaaatgaagtagtggcacaaaaatcaaag 19109072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 31296692 - 31296655
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaa 195  Q
    ||||||||||||||||||||| || |||||||||||||    
T  31296692 tgacaacttttatgacaaccataaatttacaaagaaaa 31296655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 44977429 - 44977478
Alignment:
Q  171 gacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||| || ||||||||||||||| |||| || ||||||||||||||    
T  44977429 gacaaccataaatttacaaagaaaatggggtattgacacaaaaaccaaag 44977478  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 6639546 - 6639590
Alignment:
Q  162 aacttttatgacaaccaaaatttt-acaaagaaaatgaggtagtg 205  Q
    |||||||||||||||||||||||| | |||| |||||||||||||    
T  6639546 aacttttatgacaaccaaaattttaaaaaaggaaatgaggtagtg 6639590  T

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Target: scaffold0519 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 11937 - 11874
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  11937 atgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaag 11874  T

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Target: scaffold0098 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 49449 - 49388
Alignment:
Q  158 tgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||    
T  49449 tgacaacttttgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaa 49388  T

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Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 35665 - 35615
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  35665 tgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaag 35615  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 16705 - 16767
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||| ||||| ||| |||| ||||||||||||||||| ||| |||||||| ||||    
T  16705 atgacaacttttaagacaatcaacattt-acaaagaaaatgaggtattggtacaaaaactaaag 16767  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 56139 - 56077
Alignment:
Q  157 atgacaacttttatgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaag 220  Q
    ||||||||||||| ||||| ||| |||| ||||||||||||||||| ||| |||||||| ||||    
T  56139 atgacaacttttaagacaatcaacattt-acaaagaaaatgaggtattggtacaaaaactaaag 56077  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 10892 - 10941
Alignment:
Q  170 tgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaa 219  Q
    |||||| |||||||||| |||||||||||||||||  |||||||| ||||    
T  10892 tgacaatcaaaattttataaagaaaatgaggtagtaacacaaaaatcaaa 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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