View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20747_high_14 (Length: 205)
Name: NF20747_high_14
Description: NF20747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20747_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 37296684 - 37296870
Alignment:
| Q |
1 |
cagacctcaaaccatgtaaccaatctatctattttaagaaaagtctttcgctaatgacatgacatatgaagaaatttcacgcctttgttccccatgattc |
100 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
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| T |
37296684 |
cagacctcaaaccatgcaaccaatctatctattttaagaaaagtctttcgctaatgacatgacatatgaagaaattttacgcctttgttccccacgattc |
37296783 |
T |
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| Q |
101 |
catactcttgcacatgatctttactactagttacatcataataagtctaagccggtatagtttcctcaggatgaccgatgacctctc |
187 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
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| T |
37296784 |
catactcttgcacatgatcattactactagttacatcataataagtctaagccggtatagtttccccaggatgagcgatgacctctc |
37296870 |
T |
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