View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20747_high_7 (Length: 393)

Name: NF20747_high_7
Description: NF20747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20747_high_7
NF20747_high_7
[»] chr4 (19 HSPs)
chr4 (149-377)||(39036093-39036321)
chr4 (10-146)||(39035831-39035966)
chr4 (1-51)||(35952614-35952664)
chr4 (1-48)||(28964248-28964295)
chr4 (1-40)||(36635336-36635375)
chr4 (1-48)||(54580023-54580070)
chr4 (1-47)||(5775359-5775405)
chr4 (9-51)||(22234887-22234929)
chr4 (1-39)||(22440609-22440647)
chr4 (9-51)||(28084542-28084584)
chr4 (3-41)||(40613464-40613502)
chr4 (1-38)||(903934-903971)
chr4 (2-51)||(30982875-30982924)
chr4 (1-49)||(35723383-35723432)
chr4 (3-48)||(40179636-40179681)
chr4 (4-48)||(10499270-10499314)
chr4 (1-41)||(14126118-14126158)
chr4 (1-41)||(16189721-16189761)
chr4 (1-41)||(40774293-40774333)
[»] chr8 (21 HSPs)
chr8 (1-52)||(11927082-11927133)
chr8 (1-58)||(11944677-11944734)
chr8 (1-104)||(25172642-25172745)
chr8 (9-49)||(26902174-26902214)
chr8 (9-41)||(27213567-27213599)
chr8 (1-41)||(31236584-31236624)
chr8 (1-41)||(34897097-34897137)
chr8 (1-48)||(3025563-3025610)
chr8 (9-48)||(4786338-4786377)
chr8 (1-48)||(13844596-13844643)
chr8 (1-52)||(15816125-15816176)
chr8 (1-52)||(25566853-25566904)
chr8 (10-48)||(8847277-8847315)
chr8 (1-47)||(12606830-12606876)
chr8 (1-47)||(14134711-14134757)
chr8 (1-51)||(24362199-24362249)
chr8 (1-58)||(4122239-4122296)
chr8 (9-46)||(18964197-18964234)
chr8 (1-45)||(20785468-20785512)
chr8 (1-53)||(28383825-28383877)
chr8 (1-41)||(34222959-34222999)
[»] chr6 (27 HSPs)
chr6 (1-48)||(19040364-19040411)
chr6 (1-51)||(9025491-9025541)
chr6 (1-49)||(9617446-9617494)
chr6 (1-48)||(7265593-7265640)
chr6 (1-48)||(7377991-7378038)
chr6 (1-48)||(9629395-9629442)
chr6 (1-51)||(26562701-26562751)
chr6 (1-51)||(32320666-32320716)
chr6 (1-41)||(11591877-11591917)
chr6 (1-41)||(17341671-17341711)
chr6 (1-41)||(30866151-30866191)
chr6 (9-48)||(7027262-7027301)
chr6 (1-48)||(33001289-33001336)
chr6 (1-39)||(1532252-1532290)
chr6 (6-48)||(2769104-2769146)
chr6 (1-51)||(7086807-7086857)
chr6 (1-51)||(9027190-9027240)
chr6 (1-51)||(9195751-9195801)
chr6 (1-51)||(10770671-10770721)
chr6 (1-51)||(10888971-10889021)
chr6 (1-47)||(13360373-13360419)
chr6 (1-51)||(16766709-16766759)
chr6 (1-51)||(31384932-31384982)
chr6 (1-51)||(34073344-34073394)
chr6 (1-50)||(7151424-7151473)
chr6 (1-46)||(26178683-26178728)
chr6 (3-51)||(17327652-17327700)
[»] chr1 (30 HSPs)
chr1 (1-51)||(7918208-7918258)
chr1 (1-51)||(9828056-9828106)
chr1 (1-51)||(25361898-25361948)
chr1 (1-51)||(44482242-44482292)
chr1 (4-52)||(34371728-34371776)
chr1 (1-40)||(17425101-17425140)
chr1 (1-51)||(1486706-1486756)
chr1 (1-51)||(6427362-6427412)
chr1 (4-46)||(10233268-10233310)
chr1 (1-46)||(1864882-1864927)
chr1 (1-48)||(9709832-9709879)
chr1 (1-52)||(16164311-16164362)
chr1 (1-40)||(25098563-25098602)
chr1 (9-48)||(30749860-30749899)
chr1 (9-48)||(30771311-30771350)
chr1 (1-48)||(40181883-40181930)
chr1 (1-48)||(52903261-52903308)
chr1 (9-51)||(5944303-5944345)
chr1 (1-51)||(9629897-9629947)
chr1 (1-39)||(19324574-19324612)
chr1 (9-51)||(20157347-20157389)
chr1 (1-51)||(24577183-24577233)
chr1 (1-51)||(25272494-25272544)
chr1 (1-51)||(34712380-34712430)
chr1 (9-51)||(35919273-35919315)
chr1 (1-47)||(36878473-36878519)
chr1 (9-46)||(13997903-13997940)
chr1 (9-66)||(48148019-48148076)
chr1 (1-41)||(398772-398812)
chr1 (9-41)||(17705593-17705625)
[»] chr7 (23 HSPs)
chr7 (2-51)||(22602707-22602756)
chr7 (1-60)||(35297660-35297719)
chr7 (1-51)||(5548688-5548738)
chr7 (1-51)||(12843172-12843222)
chr7 (1-51)||(15902834-15902884)
chr7 (1-51)||(32308132-32308182)
chr7 (9-46)||(17851451-17851488)
chr7 (1-58)||(19930931-19930988)
chr7 (1-49)||(35861976-35862024)
chr7 (1-48)||(9482946-9482993)
chr7 (1-52)||(19206062-19206113)
chr7 (1-48)||(20549803-20549850)
chr7 (1-51)||(7328688-7328738)
chr7 (1-51)||(16341508-16341558)
chr7 (1-51)||(17307905-17307955)
chr7 (9-51)||(18013071-18013113)
chr7 (1-51)||(24339654-24339704)
chr7 (1-47)||(42720891-42720937)
chr7 (10-47)||(640134-640171)
chr7 (15-47)||(3294334-3294366)
chr7 (3-47)||(5835261-5835305)
chr7 (1-49)||(19992013-19992061)
chr7 (9-41)||(22868062-22868094)
[»] chr5 (17 HSPs)
chr5 (2-59)||(41091246-41091303)
chr5 (1-51)||(3966515-3966565)
chr5 (1-51)||(6471886-6471936)
chr5 (1-41)||(5467985-5468025)
chr5 (1-48)||(28588674-28588721)
chr5 (1-48)||(30502388-30502435)
chr5 (1-48)||(30542731-30542778)
chr5 (1-52)||(36838555-36838606)
chr5 (1-51)||(22423809-22423859)
chr5 (1-39)||(24273039-24273077)
chr5 (1-39)||(24389137-24389175)
chr5 (1-51)||(32766940-32766990)
chr5 (1-51)||(39698553-39698603)
chr5 (1-41)||(18421848-18421888)
chr5 (1-41)||(19168828-19168868)
chr5 (1-45)||(27144475-27144519)
chr5 (9-41)||(39758292-39758324)
[»] chr3 (20 HSPs)
chr3 (1-57)||(11665956-11666012)
chr3 (1-48)||(7928462-7928509)
chr3 (1-52)||(39002044-39002095)
chr3 (1-51)||(49651783-49651833)
chr3 (3-47)||(48202270-48202314)
chr3 (1-48)||(8789550-8789597)
chr3 (1-52)||(15314872-15314923)
chr3 (1-52)||(17005615-17005666)
chr3 (9-48)||(35222958-35222997)
chr3 (9-48)||(40993335-40993374)
chr3 (1-48)||(49505154-49505201)
chr3 (1-51)||(8039832-8039882)
chr3 (1-51)||(11313797-11313847)
chr3 (2-48)||(25093515-25093561)
chr3 (1-51)||(25948884-25948934)
chr3 (1-50)||(28918013-28918062)
chr3 (1-42)||(32804546-32804587)
chr3 (1-37)||(9624653-9624689)
chr3 (1-41)||(29508456-29508496)
chr3 (1-41)||(51512190-51512230)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-52)||(9743-9794)
[»] chr2 (20 HSPs)
chr2 (1-48)||(34691805-34691852)
chr2 (1-48)||(34714217-34714264)
chr2 (1-52)||(44860332-44860383)
chr2 (1-48)||(5367204-5367251)
chr2 (9-48)||(20242727-20242766)
chr2 (9-48)||(20922928-20922967)
chr2 (1-40)||(21616774-21616813)
chr2 (1-60)||(36756332-36756391)
chr2 (1-51)||(18622618-18622668)
chr2 (9-51)||(34784979-34785021)
chr2 (1-34)||(28412362-28412395)
chr2 (1-38)||(28677921-28677958)
chr2 (9-46)||(31808097-31808134)
chr2 (2-47)||(38355888-38355933)
chr2 (3-51)||(15909629-15909677)
chr2 (4-52)||(18889587-18889635)
chr2 (1-41)||(23718038-23718078)
chr2 (1-41)||(24105710-24105750)
chr2 (1-41)||(35449525-35449565)
chr2 (1-41)||(37411251-37411291)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-51)||(44522-44572)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-51)||(135309-135359)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-51)||(20184-20234)
[»] scaffold0171 (2 HSPs)
scaffold0171 (9-51)||(23440-23482)
scaffold0171 (9-49)||(23531-23571)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-51)||(53192-53242)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-51)||(263369-263419)
[»] scaffold0022 (1 HSPs)
scaffold0022 (9-58)||(99913-99962)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-49)||(6324-6372)


Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 149 - 377
Target Start/End: Original strand, 39036093 - 39036321
Alignment:
Q  149 atataccctcaaattaagtggataaggttgtagatgttttaatgtgattatgtgaaacaaaattctttaataaagtggtcatgagagattctaataaggc 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39036093 atataccctcaaataaagtggataaggttgtagatgttttaatgtgattatgtgaaacaaaattctttaataaagtggtcatgagagattctaataaggc 39036192  T
Q  249 atcatacgagttatgagattcatccacattacgctttaagaaaggttccaatggatttttccatatttcccaattagaagggaataggctaattagaagt 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39036193 atcatacgagttatgagattcatccacattacgctttaagaaaggttccaatggatttttccatatttcccaattagaagggaataggctaattagaagt 39036292  T
Q  349 atcacaagcaatggtatttaagtggctga 377  Q
    ||||||| |||||||||||||||||||||    
T  39036293 atcacaaacaatggtatttaagtggctga 39036321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 39035966 - 39035831
Alignment:
Q  10 aaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtcgatcacgatagatatttgacactaaaacacgtctaatttgaagagtatctt 109  Q
    ||||||||||||||| || |||||||||| ||||| ||||||| |||||| ||||||||||| | ||| ||| ||||| | ||||| ||||||||||| |    
T  39035966 aaatcacataattcagtgaaattatatgtatctgtatcgtgttgatgtcggtcacgatagatgtctgatactgaaacatg-ctaatctgaagagtatcct 39035868  T
Q  110 tgcttcataggctcgtattatccactatcgttaagaa 146  Q
    || ||||||| ||| || |||||||||||||||||||    
T  39035867 tgtttcatagactcatactatccactatcgttaagaa 39035831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35952664 - 35952614
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||||||||||| |||||||| ||||||||||||| || |||||||||    
T  35952664 aatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgt 35952614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28964295 - 28964248
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||| | ||||||||||||    
T  28964295 aatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcg 28964248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36635336 - 36635375
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgt 40  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  36635336 aatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 54580070 - 54580023
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||| ||||| ||||||    
T  54580070 aatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5775405 - 5775359
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||| |||||||||||||| | |||||||||||||||| |||||    
T  5775405 aatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 22234929 - 22234887
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||| ||||||| |||||||| |||||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgt 22234887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22440647 - 22440609
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtg 39  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  22440647 aatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 28084542 - 28084584
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||| |||||||| | |||||||||||||||    
T  28084542 aaaatcacataattcaatgtaattacaagtgtctgtgtcgtgt 28084584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 40613464 - 40613502
Alignment:
Q  3 tttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  40613464 tttgagaaaatcacataattcagtgtaattatatgtgtc 40613502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 903934 - 903971
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgt 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  903934 aatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 30982924 - 30982875
Alignment:
Q  2 atttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||| ||||||||||| |||| |||||||||| ||||| |||||||||    
T  30982924 atttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgt 30982875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35723432 - 35723383
Alignment:
Q  1 aatttgataaaat-cacataattcactgtaattatatgtgtctgtgtcgt 49  Q
    ||||||| ||||| ||||||||||| |||||||||||||||| |||||||    
T  35723432 aatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgt 35723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 40179681 - 40179636
Alignment:
Q  3 tttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||| |||||||||||||||| |||||||||||| ||| ||||||    
T  40179681 tttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcg 40179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 10499314 - 10499270
Alignment:
Q  4 ttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||| |||||||||||||| | |||||||||||||||| ||||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 10499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14126158 - 14126118
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  14126158 aatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16189721 - 16189761
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| |||||||||||||||| ||||||||| ||||||    
T  16189721 aatttgagaaaatcacataattcagtgtaattatgtgtgtc 16189761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40774293 - 40774333
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  40774293 aattttataaaatcagataattcaatgtaattatatgtgtc 40774333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11927133 - 11927082
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  11927133 aatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtt 11927082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11944677 - 11944734
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtc 58  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||| |||||    
T  11944677 aatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtc 11944734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25172745 - 25172642
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtcgatcacgatagatatttgacactaaaacacgtctaatttgaa 100  Q
    ||||||||||||| ||||| || | |||||||||||||||| ||||||||| |||||||  |||||||  |||   |||||| ||||||||||||  |||    
T  25172745 aatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgatacgtatcaaacactagaacacgtctaatccgaa 25172646  T
Q  101 gagt 104  Q
    ||||    
T  25172645 gagt 25172642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 26902214 - 26902174
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgt 49  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgtcgt 26902174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 27213567 - 27213599
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||||||||||||||||||||    
T  27213567 aaaatcacataattcactgtaattatatgtgtc 27213599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31236624 - 31236584
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  31236624 aatttgagaaaatcacataattcaatgtaattatatgtgtc 31236584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34897097 - 34897137
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  34897097 aatttgagaaaatcacataattcagtgtaattatatgtgtc 34897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3025563 - 3025610
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||| ||||| ||||||    
T  3025563 aatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 4786377 - 4786338
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  4786377 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13844643 - 13844596
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||| | |||||||||||||||| ||||||    
T  13844643 aatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15816176 - 15816125
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||||||||||| | |||||||||| ||||| ||||||||||    
T  15816176 aatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgtt 15816125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25566853 - 25566904
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||||||||||||| |||||||| | ||||| ||||||||||    
T  25566853 aatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtt 25566904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  10 aaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12606876 - 12606830
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||| ||||||| |||||||| |||||||||||||||| |||||    
T  12606876 aatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14134711 - 14134757
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||| |||||||||||||||| ||||||||||| |||| |||||    
T  14134711 aatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24362249 - 24362199
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| | |||||||||||||| ||||||||||||||||  ||||||||    
T  24362249 aatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgt 24362199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4122296 - 4122239
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtc 58  Q
    |||| |||||||| | |||||||| |||||||||||||||| |||| |||| ||||||    
T  4122296 aattagataaaattatataattcattgtaattatatgtgtcggtgttgtgtcaatgtc 4122239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 18964197 - 18964234
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgt 46  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  18964197 aaaatcacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20785512 - 20785468
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtg 45  Q
    |||||||  ||||||||||||| | ||||||||||||||||||||    
T  20785512 aatttgaggaaatcacataatttaatgtaattatatgtgtctgtg 20785468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28383877 - 28383825
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtta 53  Q
    |||||||||||||||| ||||| | ||| |||| ||||||| |||||||||||    
T  28383877 aatttgataaaatcacgtaatttattgttattacatgtgtcagtgtcgtgtta 28383825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34222959 - 34222999
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  34222959 aatttaataaaatcacataattaagtgtaattatatgtgtc 34222999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19040364 - 19040411
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  19040364 aatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9025541 - 9025491
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  9025541 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9617446 - 9617494
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgt 49  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  9617446 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7265640 - 7265593
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  7265640 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7377991 - 7378038
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  7377991 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 7378038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9629395 - 9629442
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  9629395 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26562701 - 26562751
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| ||||||||||||||||  ||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgt 26562751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32320716 - 32320666
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||||||||||| ||| ||||||||| || |||||||||    
T  32320716 aatttgataaaatcacataattcaatgtcattatatgtatcggtgtcgtgt 32320666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11591917 - 11591877
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtc 11591877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17341711 - 17341671
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  17341711 aatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30866191 - 30866151
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  30866191 aatttgagaaaatcacataattcaatgtaattatatgtgtc 30866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 7027262 - 7027301
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33001336 - 33001289
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||| | |||||||||||||||| ||||||    
T  33001336 aatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1532252 - 1532290
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtg 39  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  1532252 aatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 2769104 - 2769146
Alignment:
Q  6 gataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||| |||||||| | |||||||||||||||||||||||    
T  2769104 gataaaataacataattgaatgtaattatatgtgtctgtgtcg 2769146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7086807 - 7086857
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||| | |||||||||||||||| |||| ||||    
T  7086807 aatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgt 7086857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9027190 - 9027240
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| | |||||||||||||  |||||||||||||||| |||||||||    
T  9027190 aatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9195801 - 9195751
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||| |||||||| | |||||||||||||||| |||||||||    
T  9195801 aatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10770721 - 10770671
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||| | ||||| |||||||||    
T  10770721 aatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10889021 - 10888971
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||||||||| | ||| |||||||||||  |||||||||    
T  10889021 aatttgataaaatcacataatttagtgtgattatatgtgttagtgtcgtgt 10888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13360419 - 13360373
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||| |||||||||||||||| ||||||||||||| || |||||    
T  13360419 aatttgagaaaatcacataattcagtgtaattatatgtttcggtgtc 13360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16766709 - 16766759
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||| | ||||| |||||||||    
T  16766709 aatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 16766759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31384932 - 31384982
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||| | ||||| |||||||||    
T  31384932 aatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 31384982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34073394 - 34073344
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||| ||||||||| |||||||||||| ||| |||||||||    
T  34073394 aatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgt 34073344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7151424 - 7151473
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtg 50  Q
    ||||||| |||||||||||||| | |||||||||||||||  ||||||||    
T  7151424 aatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26178728 - 26178683
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgt 46  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||    
T  26178728 aatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 17327700 - 17327652
Alignment:
Q  3 tttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||| |||||||||||||| | ||||| |||||||||| |||||||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgt 17327652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7918258 - 7918208
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  7918258 aatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9828056 - 9828106
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  9828056 aatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgt 9828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25361898 - 25361948
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  25361898 aatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 25361948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44482242 - 44482292
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  44482242 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 44482292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 34371728 - 34371776
Alignment:
Q  4 ttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtt 34371776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17425140 - 17425101
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgt 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  17425140 aatttgataaaatcacataattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1486756 - 1486706
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||| ||||| |||||||||    
T  1486756 aatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 1486706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6427362 - 6427412
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||||||    
T  6427362 aatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 10233268 - 10233310
Alignment:
Q  4 ttgataaaatcacataattcactgtaattatatgtgtctgtgt 46  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  10233268 ttgagaaaatcacataattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1864927 - 1864882
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgt 46  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||    
T  1864927 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9709832 - 9709879
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||  |||||||||||||||| ||||||    
T  9709832 aatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcg 9709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16164362 - 16164311
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||||||||||| | ||||||||||||||||  |||||||||    
T  16164362 aatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgtt 16164311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25098602 - 25098563
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgt 40  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  25098602 aatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 30749860 - 30749899
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  30749860 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 30749899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 30771311 - 30771350
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  30771311 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 30771350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40181883 - 40181930
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| ||||||||||||| || ||||||    
T  40181883 aatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52903261 - 52903308
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||| ||||||||| |||||||| |||||||||||||||| ||||||    
T  52903261 aatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 5944303 - 5944345
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||| |||||||||| ||||| |||||||||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 5944345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9629947 - 9629897
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||||||||||| |||||||| ||| |||||| ||||| |||||||||    
T  9629947 aatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgt 9629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19324574 - 19324612
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtg 39  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  19324574 aatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 20157389 - 20157347
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||| |||||| ||||||||| |||||||||    
T  20157389 aaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgt 20157347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24577233 - 24577183
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||| | ||||| |||||||||    
T  24577233 aatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||| | |||||||||| ||||| |||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34712430 - 34712380
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||| |||||||| | |||||||||||||||| |||||||||    
T  34712430 aatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 35919315 - 35919273
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||| |||||||||| ||||| |||||||||    
T  35919315 aaaatcacataattcagtgtaattataagtgtccgtgtcgtgt 35919273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36878473 - 36878519
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||| |||||||||||||||| |||||||||| ||||| |||||    
T  36878473 aatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 13997903 - 13997940
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgt 46  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  13997903 aaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 48148076 - 48148019
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtcgatcacga 66  Q
    ||||||| |||||||| ||||||||||| |||| |||||||||| || |||| |||||    
T  48148076 aaaatcatataattcagtgtaattatatatgtcggtgtcgtgttgatatcgaacacga 48148019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 398812 - 398772
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| |||||||||||||||| |||||||||| |||||    
T  398812 aatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 17705625 - 17705593
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||| ||||||||||||||||    
T  17705625 aaaatcacataattcagtgtaattatatgtgtc 17705593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 22602756 - 22602707
Alignment:
Q  2 atttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35297719 - 35297660
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtcga 60  Q
    ||||||| |||||||||||||||| | |||||||||||||  |||||||||| |||||||    
T  35297719 aatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgttgatgtcga 35297660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5548688 - 5548738
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||||| |||||||| |||||||||||||||| |||||||||    
T  5548688 aatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12843222 - 12843172
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||||||||| |||||||||| |||||||| ||||||| |||||||||    
T  12843222 aatttgataaaattacataattcaatgtaattacatgtgtcagtgtcgtgt 12843172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15902834 - 15902884
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||||||||| | |||||||||||||||| |||| ||||    
T  15902834 aatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgt 15902884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32308132 - 32308182
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| ||||||| |||||||| |||||||||    
T  32308132 aatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgt 32308182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 17851451 - 17851488
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgt 46  Q
    |||||||||||||||| |||||||||||||||||||||    
T  17851451 aaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19930988 - 19930931
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtc 58  Q
    ||||||||||||| |||||||||| ||||||||||||||||  | |||||| ||||||    
T  19930988 aatttgataaaatgacataattcaatgtaattatatgtgtcgatatcgtgtcaatgtc 19930931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35861976 - 35862024
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgt 49  Q
    ||||||| |||||||||||||||| ||||||| || |||||||||||||    
T  35861976 aatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9482946 - 9482993
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| ||||||||| |||||| |||||||||||||||| ||||||    
T  9482946 aatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 9482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19206062 - 19206113
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||||||||||||| | |||||||||||||| ||||| ||||    
T  19206062 aatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgtt 19206113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20549803 - 20549850
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||| ||||||| |||||||||||||||| ||||||    
T  20549803 aatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7328738 - 7328688
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||| |||||||| | |||||||||||||||| |||||||||    
T  7328738 aatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16341508 - 16341558
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||| | |||||||||||||| | |||||||||    
T  16341508 aatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgt 16341558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17307905 - 17307955
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||| |||||||||| |||||||||||||||  |||||||||    
T  17307905 aatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgt 17307955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 18013113 - 18013071
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||| |||||||||| |||||||||||||||| |||||||||    
T  18013113 aaaattacataattcagtgtaattatatgtgtcagtgtcgtgt 18013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24339654 - 24339704
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||| | ||||| |||||||||    
T  24339654 aatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24339704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42720937 - 42720891
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||| |||||||||||||| | |||||||||||||||| |||||    
T  42720937 aatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtc 42720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 640134 - 640171
Alignment:
Q  10 aaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 3294366 - 3294334
Alignment:
Q  15 acataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||||||||||||||||||| |||||||||||    
T  3294366 acataattcactgtaattatacgtgtctgtgtc 3294334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 5835261 - 5835305
Alignment:
Q  3 tttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||| ||||| |||||||||| |||||||||||||||| |||||    
T  5835261 tttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19992013 - 19992061
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgt 49  Q
    ||||||| ||||||||||| |||| |||||||||| ||||| |||||||    
T  19992013 aatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 22868062 - 22868094
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||| ||||||||||||||||    
T  22868062 aaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 41091303 - 41091246
Alignment:
Q  2 atttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtcg 59  Q
    |||||| |||||||||||||||| ||||||||||||||||  |||||||| |||||||    
T  41091303 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcg 41091246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3966515 - 3966565
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||||||| |||||| |||||||||||||||| |||||||||    
T  3966515 aatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgt 3966565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6471936 - 6471886
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||||||    
T  6471936 aatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5468025 - 5467985
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  5468025 aatttgataaaatcacataattcagtgtaattataggtgtc 5467985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28588721 - 28588674
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||| ||||| ||||||    
T  28588721 aatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30502435 - 30502388
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||| ||||||| |||||||||||||||| ||||||    
T  30502435 aatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30542778 - 30542731
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||| ||||||| |||||||||||||||| ||||||    
T  30542778 aatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36838555 - 36838606
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| ||||| |||||||| | |||||||||||||||| ||||||||||    
T  36838555 aatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22423859 - 22423809
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| | ||||||||| |||| |||||||||    
T  22423859 aatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgt 22423809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24273077 - 24273039
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtg 39  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  24273077 aatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24389137 - 24389175
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtg 39  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  24389137 aatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32766990 - 32766940
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||| || |||||| ||||||||||||||| ||||||||||    
T  32766990 aatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgt 32766940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39698553 - 39698603
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||| | ||||| |||||||||    
T  39698553 aatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 39698603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18421888 - 18421848
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| ||||||||||||| || ||||||||||||||||    
T  18421888 aatttgagaaaatcacataatccagtgtaattatatgtgtc 18421848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19168868 - 19168828
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||||| ||||| |||||| |||||||||    
T  19168868 aatttgataaaatcacattattcagtgtaatcatatgtgtc 19168828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27144475 - 27144519
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtg 45  Q
    |||||||  ||||||||||||| | ||||||||||||||||||||    
T  27144475 aatttgaggaaatcacataatttagtgtaattatatgtgtctgtg 27144519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 39758292 - 39758324
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||| ||||||||||||||||    
T  39758292 aaaatcacataattcagtgtaattatatgtgtc 39758324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11665956 - 11666012
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgt 57  Q
    ||||||||||||||||| |||| | |||||||||||||||| |||||||||| ||||    
T  11665956 aatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgt 11666012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7928462 - 7928509
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  7928462 aatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39002044 - 39002095
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||||||||||||| ||||||||||| |||| ||||||||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaattatatatgtcagtgtcgtgtt 39002095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49651833 - 49651783
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||||||||||||||||||||||| | ||||| |||||||||    
T  49651833 aatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgt 49651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 48202314 - 48202270
Alignment:
Q  3 tttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    ||||| |||||||||||||| | ||||||||||||||||||||||    
T  48202314 tttgagaaaatcacataatttaatgtaattatatgtgtctgtgtc 48202270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8789597 - 8789550
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||||  |||||||||||||||| ||||||    
T  8789597 aatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcg 8789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15314923 - 15314872
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||||||||||| | |||||||||||||||  ||||||||||    
T  15314923 aatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgtt 15314872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17005666 - 17005615
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||||||||||| |||||||| |||||||||| ||||| |||| |||||    
T  17005666 aatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgtt 17005615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 35222958 - 35222997
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  35222958 aaaatcacataattcaatgtaattatatgtgtcggtgtcg 35222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 40993374 - 40993335
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49505201 - 49505154
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||| |||||||||||||| | |||||||||||||||| ||||||    
T  49505201 aatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8039882 - 8039832
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| ||||| | |||||||| |||||||||||||||| |||||||||    
T  8039882 aatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgt 8039832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11313847 - 11313797
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||| | |||||||||||||||  |||||||||    
T  11313847 aatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 25093515 - 25093561
Alignment:
Q  2 atttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||    
T  25093515 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 25093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25948934 - 25948884
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||| ||||  |||||||||    
T  25948934 aatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgt 25948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28918013 - 28918062
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtg 50  Q
    ||||||| |||||||||||||||| |||||||| | ||||| ||||||||    
T  28918013 aatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32804587 - 32804546
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtct 42  Q
    ||||||| |||||||||||||| | |||||||||||||||||    
T  32804587 aatttgagaaaatcacataatttagtgtaattatatgtgtct 32804546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9624653 - 9624689
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatg 37  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  9624653 aatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29508456 - 29508496
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| ||||||| |||||||| ||||||||||||||||    
T  29508456 aatttgaaaaaatcatataattcagtgtaattatatgtgtc 29508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51512230 - 51512190
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    |||||||||||||||||||||||| || ||| |||||||||    
T  51512230 aatttgataaaatcacataattcaatggaatcatatgtgtc 51512190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9794 - 9743
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||||| ||||||| |||||||||||||||| ||||||||||    
T  9794 aatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgtt 9743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34691852 - 34691805
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  34691852 aatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34714264 - 34714217
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  34714264 aatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44860332 - 44860383
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    ||||||| |||||| ||||||||| |||||||||||||||| ||||||||||    
T  44860332 aatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgtt 44860383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5367204 - 5367251
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||  ||||||||||||||| |||||||||||||||| ||||||    
T  5367204 aatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 20242766 - 20242727
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  20242766 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 20922967 - 20922928
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcg 48  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  20922967 aaaatcacataatttagtgtaattatatgtgtctgtgtcg 20922928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21616774 - 21616813
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgt 40  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  21616774 aatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36756391 - 36756332
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtcga 60  Q
    |||||||  |||| |||||||||| |||||||||| ||||| ||||||||||| ||||||    
T  36756391 aatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcga 36756332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18622618 - 18622668
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||| |||||||||||||||||| |||||||||| ||||  |||||||||    
T  18622618 aatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgt 18622668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 34785021 - 34784979
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  34785021 aaaatcacataatttagtgtaattatatgtgtcggtgtcgtgt 34784979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28412362 - 28412395
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  28412362 aatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28677921 - 28677958
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgt 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  28677921 aatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 31808097 - 31808134
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgt 46  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  31808097 aaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 38355933 - 38355888
Alignment:
Q  2 atttgataaaatcacataattcactgtaattatatgtgtctgtgtc 47  Q
    |||||| |||||||||||||||| ||| |||||||||||| |||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 15909677 - 15909629
Alignment:
Q  3 tttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||| ||||| |||||||||| |||||||||||||| | |||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtgacagtgtcgtgt 15909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 18889635 - 18889587
Alignment:
Q  4 ttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgtt 52  Q
    |||| |||||||||||||||| |||||| ||||||||| ||||| ||||    
T  18889635 ttgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtt 18889587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23718038 - 23718078
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  23718038 aatttgagaaagtcacataattcagtgtaattatatgtgtc 23718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24105710 - 24105750
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  24105710 aatttgagaaagtcacataattcagtgtaattatatgtgtc 24105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35449525 - 35449565
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| ||||||||| |||||| ||||||||||||||||    
T  35449525 aatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37411291 - 37411251
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtc 41  Q
    ||||||| |||||||||||||||| ||| ||||||||||||    
T  37411291 aatttgagaaaatcacataattcagtgtgattatatgtgtc 37411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44572 - 44522
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||||| || ||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgt 44522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 135359 - 135309
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||  |||||||||||||||| |||||||||    
T  135359 aatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgt 135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20184 - 20234
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||| | ||||| |||||||||    
T  20184 aatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 20234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 23440 - 23482
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    |||||||||||||||| |||||||||| ||||| |||||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 23482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 23531 - 23571
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgt 49  Q
    |||||||||||||||| |||||||||| ||||| |||||||    
T  23531 aaaatcacataattcagtgtaattataagtgtcagtgtcgt 23571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 53192 - 53242
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||| ||||| ||| |||||    
T  53192 aatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgt 53242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 263419 - 263369
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgtgt 51  Q
    ||||||| |||| ||||||||||| |||||||||| ||||| |||||||||    
T  263419 aatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgt 263369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 99913 - 99962
Alignment:
Q  9 aaaatcacataattcactgtaattatatgtgtctgtgtcgtgttaatgtc 58  Q
    ||||| |||||||||| |||||||||||||||  ||||||||| ||||||    
T  99913 aaaataacataattcaatgtaattatatgtgttggtgtcgtgtcaatgtc 99962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6324 - 6372
Alignment:
Q  1 aatttgataaaatcacataattcactgtaattatatgtgtctgtgtcgt 49  Q
    ||||||| |||||  ||||||||| |||||||||||||||| |||||||    
T  6324 aatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtcgt 6372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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