View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2074_high_3 (Length: 239)
Name: NF2074_high_3
Description: NF2074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2074_high_3 |
 |  |
|
| [»] scaffold0070 (1 HSPs) |
 |  |  |
|
| [»] scaffold0060 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 14276132 - 14275914
Alignment:
| Q |
4 |
tggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggat |
103 |
Q |
| |
|
||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
14276132 |
tggtcggatactcattgtgtgtgatctattttttggagttaataatcatgtgtcgcatgcatacattcattgtcgcgtggtgcctataattggttgggac |
14276033 |
T |
 |
| Q |
104 |
tcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataatt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14276032 |
ctgaagtcttgagtgcccataattggttggggcttatcgtttcttggttgagtgctcataattggttgaggctcgttgttttcttttggtgcccataatt |
14275933 |
T |
 |
| Q |
204 |
ggttggaacccgtggggta |
222 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
14275932 |
agttgggacccgtggggta |
14275914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 37627226 - 37627013
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
|||| |||||||||||||| | ||||||| |||||||||||| | |||||||||||||||||| ||||||| ||||||| ||||||||||||||| | |
|
|
| T |
37627226 |
gtcgcatactcattgtgagtggtctattt-gtggagttaatatgcaggtgtcgcatgcatacattcattgtcgcttggtgcccataattggttgggatcc |
37627128 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| |
|
|
| T |
37627127 |
gaagtcttgagtgcccataattggttgaggcttattgtttcct-tttgagtgctcataattggttgaggctcg-tgtcttcttttggtgcccataattgg |
37627030 |
T |
 |
| Q |
206 |
ttggaacccgtggggta |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
37627029 |
ttgggacccgtggggta |
37627013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 37803684 - 37803601
Alignment:
| Q |
53 |
gtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggc |
136 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
37803684 |
gtgtcgcatgcatacattcattgtcgtgtggtgcccataattggttgggacccgaagtcttgagtgcccataattggttggggc |
37803601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 37803625 - 37803554
Alignment:
| Q |
151 |
ttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattggttggaacccgtggggta |
222 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37803625 |
ttgagtgcccataattggttggggcatattgtcttcttttggtgcccataattggttggaacccgtggggta |
37803554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 37806336 - 37806299
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagtt |
43 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
37806336 |
gtcggatactcattgtgagtggtctattttgtggagtt |
37806299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 11991951 - 11991733
Alignment:
| Q |
4 |
tggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggat |
103 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| |||| |||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
11991951 |
tggtcgaatactcattgtgagtgatctattttgtggagttaataaccatgtgtcgcaagcatgcattcattgtcgcatggtgcccataattggttgggac |
11991852 |
T |
 |
| Q |
104 |
tcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataatt |
203 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
11991851 |
ccaaagtcttgagtgcccataattggttgaggcttatcgtttcttggttgagtgctcataattggttgaggctcgttgatttcatttggtgcccataatt |
11991752 |
T |
 |
| Q |
204 |
ggttggaacccgtggggta |
222 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
11991751 |
ggttgggacccgtggggta |
11991733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 2188165 - 2188380
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||||| |||||||||||||| | |
|
|
| T |
2188165 |
gtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatacattcattgtcgcgtggtgctcataattggttgggaccc |
2188264 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
2188265 |
gaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggttgaggctcgttgtcttcttttggtgcccataattgg |
2188363 |
T |
 |
| Q |
206 |
ttggaacccgtggggta |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
2188364 |
ttgggacccgtggggta |
2188380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 1608649 - 1608434
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||||||||||||| | |||||||||||||||||| || |||| |||||||| |||||||||||||| | |
|
|
| T |
1608649 |
gtcggatactcattgtgagtggtctatcttgtggagttaataagcaggtgtcgcatgcatacattcatggtcgcgtggtgcccataattggttgggaccc |
1608550 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
1608549 |
taagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggttgaggctctttgatttcttttggtgcccataattgg |
1608451 |
T |
 |
| Q |
206 |
ttggaacccgtggggta |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
1608450 |
ttgggacccgtggggta |
1608434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 19632739 - 19632525
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||| | |||||||||||||||||| | ||||| ||||||| |||||||||||||| | |
|
|
| T |
19632739 |
gtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatacattcagtgtcgcgtggtgctcataattggttgggaccc |
19632640 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
19632639 |
gaagtcttgagtg-ccataattggttggggcttattgtttcct-tttgagtgctcataattggttgaggcttgttgtcttcttttggtgcccataattgg |
19632542 |
T |
 |
| Q |
206 |
ttggaacccgtggggta |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
19632541 |
ttgggacccgtggggta |
19632525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 41313770 - 41313554
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||||| |||||||||||||| | |
|
|
| T |
41313770 |
gtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatacattcattgtcgcgtggtgctcataattggttgggaccc |
41313671 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgt-tttcttttgatgcccataattg |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
41313670 |
gaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggttgaggctcgttgtctttcttttggtgcccataattg |
41313572 |
T |
 |
| Q |
205 |
gttggaacccgtggggta |
222 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
41313571 |
gttgggacccgtggggta |
41313554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 19215811 - 19216026
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||| | |||| ||||||||||||| ||||||| ||||||| |||||||||||||| | |
|
|
| T |
19215811 |
gtcggatactcattgtgagtggcctattttgtggagttaataagcaggtgttgcatgcatacattcattgtcgcatggtgcccataattggttgggaccc |
19215910 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| |
|
|
| T |
19215911 |
gaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggtttaggctcgttgtcttcttttggtgcccataattgg |
19216009 |
T |
 |
| Q |
206 |
ttggaacccgtggggta |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
19216010 |
ttgggacccgtggggta |
19216026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 19589608 - 19589736
Alignment:
| Q |
59 |
catgcatacatttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgc |
158 |
Q |
| |
|
|||||||| ||| || |||||||| |||| |||||||||||| | | ||||||||||||||| ||||||||||||| || |||||| | ||||||| |
|
|
| T |
19589608 |
catgcatatattcatcgtcgtgtgctgcccataattggttggaaccctaagtcttgagtgcccgtaattggttggggtttgtcgttt-tgttttgagtgt |
19589706 |
T |
 |
| Q |
159 |
tcataattggttgaggctcgttgttttctt |
188 |
Q |
| |
|
||||||||||||||| |||||||||||||| |
|
|
| T |
19589707 |
tcataattggttgagactcgttgttttctt |
19589736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 10998966 - 10999065
Alignment:
| Q |
112 |
ttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattggttggaa |
211 |
Q |
| |
|
||||||| ||||||||||||| | |||||| |||| | ||||| |||||||||| ||| || || ||||||||||| ||||||||||||||||| | |
|
|
| T |
10998966 |
ttgagtgtccataattggttgtgacttatcatttcct-tttgagagctcataattagtttagaatc---gttttcttttggtgcccataattggttggga |
10999061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 8377847 - 8378062
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||| | |||||||| |||||||||||||| | |
|
|
| T |
8377847 |
gtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttgggaccc |
8377946 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
8377947 |
gaagtcttgagtgcccataattggttggggcttattgtttccttg-tgagtgctcataattggttgaggcccgttgatttcttttggtgcccataattgg |
8378045 |
T |
 |
| Q |
206 |
ttggaacccgtggggta |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
8378046 |
ttgggacccgtggggta |
8378062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 452142 - 451929
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
||||| |||||||| ||||| | | |||||||||||||||||| | ||||| |||||||||||| |||||||||||||||| |||||||||||||| | |
|
|
| T |
452142 |
gtcggttactcattaagagcggtgttttttgtggagttaataatcaggtgtcacatgcatacattcattgtcgtgtggtgcccataattggttgggaccc |
452043 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||| |
|
|
| T |
452042 |
gaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggttgggactcgttgatttcttttggtgcccataattgg |
451944 |
T |
 |
| Q |
206 |
ttggaacccgtgggg |
220 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
451943 |
ttgggacccgtgggg |
451929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 7093976 - 7093762
Alignment:
| Q |
7 |
tcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattcg |
106 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||||||| | |||||||||||||||||| ||||| | |||||||| |||||||||| ||| || |
|
|
| T |
7093976 |
tcggatattcattgtgagttgtctatttggtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttaggacccg |
7093877 |
T |
 |
| Q |
107 |
aagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattggt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
7093876 |
aagtcttgagtgcccataattggttggggcttattgtttccttg-tgagtgctcataattggttgaggctcgttgatttcttttggtgcccataattggt |
7093778 |
T |
 |
| Q |
207 |
tggaacccgtggggta |
222 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
7093777 |
tgggacccgtggggta |
7093762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 7097709 - 7097495
Alignment:
| Q |
7 |
tcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattcg |
106 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||||||| | |||||||||||||||||| ||||| | |||||||| |||||||||| ||| || |
|
|
| T |
7097709 |
tcggatattcattgtgagttgtctatttggtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttaggacccg |
7097610 |
T |
 |
| Q |
107 |
aagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattggt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
7097609 |
aagtcttgagtgcccataattggttggggcttattgtttccttg-tgagtgctcataattggttgaggctcgttgatttcttttggtgcccataattggt |
7097511 |
T |
 |
| Q |
207 |
tggaacccgtggggta |
222 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
7097510 |
tgggacccgtggggta |
7097495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 29822942 - 29823152
Alignment:
| Q |
10 |
gatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattcgaag |
109 |
Q |
| |
|
||||||||||||||| | ||||||||||||||| ||||| | |||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
29822942 |
gatactcattgtgagtggtctattttgtggagt-aataagcaggtgtcgcatgcatacattcattgtcgcgtggtgcccataattggttgggacccgaag |
29823040 |
T |
 |
| Q |
110 |
tcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattggttgg |
209 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |
|
|
| T |
29823041 |
tcttgagcgcccataattggttggggcttattgtttcct-tttgagtgctcataattggttgaggctcgttgtcttcttttggcgcccataattggatgg |
29823139 |
T |
 |
| Q |
210 |
aacccgtggggta |
222 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
29823140 |
gacccgtagggta |
29823152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 58788 - 58572
Alignment:
| Q |
6 |
gtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattc |
105 |
Q |
| |
|
||||| |||||||| |||| | | | ||||||||| ||||||| | ||||||||||||||||| ||||||| |||||||| |||||||||||||| | |
|
|
| T |
58788 |
gtcggttactcattatgagaggtgttttttgtggaattaataaccagctgtcgcatgcatacattcattgtcgcgtggtgcccataattggttgggaccc |
58689 |
T |
 |
| Q |
106 |
gaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattgg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
58688 |
gaagtcttgagtgcccataattggttggggcttattgtttcctttttgagtgctcataattggttgaggctcgttgtcttcttttggtgcccataattgg |
58589 |
T |
 |
| Q |
206 |
ttggaacccgtggggta |
222 |
Q |
| |
|
|||| || ||||||||| |
|
|
| T |
58588 |
ttgggacacgtggggta |
58572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 16839 - 16910
Alignment:
| Q |
151 |
ttgagtgctcataattggttgaggctcgttgttttcttttgatgcccataattggttggaacccgtggggta |
222 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
16839 |
ttgagtgctcataattggttgaggttcgttgatttcttttggtgcccataattggttgggacccgtggggta |
16910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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