View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20750_low_1 (Length: 914)
Name: NF20750_low_1
Description: NF20750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20750_low_1 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 880; Significance: 0; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 880; E-Value: 0
Query Start/End: Original strand, 1 - 904
Target Start/End: Complemental strand, 34321213 - 34320310
Alignment:
| Q |
1 |
aatagcttcaatcccttctccatcttttgtatccatcagaaatattatgttccttgaagaacaaccaaaagtggtgacccatgttggatttccccaccca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34321213 |
aatagcttcaatcccttctccatcttttgtatccatcagaaatattatgttccttgaagaacaaccaaaagtggtgacccatgttggatttccccaccca |
34321114 |
T |
 |
| Q |
101 |
aaatttgtttcatacattggaaacctacaccagctactaaaagtaaacaaattttcattttcgggatgaggctcagtaacttgtttcaagcactcagata |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34321113 |
aaatttgtttcatacattggaaacctacaccagctactaaaagtaaacaaattttcattttcgggatgaggctcagtaacttgtttcaagcactcagata |
34321014 |
T |
 |
| Q |
201 |
ttaatgacaagttttcattctctttcgctccaaatgtttctggaataaagtcatcaaactgcgataacccttcttttattttggataccaactcatgtaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34321013 |
ttaatgacaagttttcattctctttcgctccaaatgtttccggaataaagtcaccaaactgcgataacccttcttttattttggataccaactcatgtaa |
34320914 |
T |
 |
| Q |
301 |
ttccatttccttcttatctgcaaccatagacgagaaccaaacaatgtttcctgcacacttttcagacaatgcaggaaccattcttttgcgaagatctaca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34320913 |
ttccatttccttcttatctgcaaccatagacgagaaccaaacaatgtttcctacacacttttcagacaatgcaggaaccattcttttgcgaagatctaca |
34320814 |
T |
 |
| Q |
401 |
cccatgctaaataaagccgtctggaaatttaatcccattagtgaaactgcacgcttataaatccatgcagttactgcttgtacacgtgatggaggtgaat |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34320813 |
cccatgctaaataaagccgtctggaaatttaatcccattagtgaaactgcacgcttataaatccatgcagttactgcttgtacacgtgatggaggtgaat |
34320714 |
T |
 |
| Q |
501 |
gcatagaactagaagttgctattgccttaagggacttgatcattgagggttgaaacacaaaccttttacacaccacattgttttttctcgttaacacaag |
600 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34320713 |
gcatagaactagaagttgccattgccttaagggacttgatcattgagggttgaaacacaaaccttttacacaccacattgttttttctcgttaacacaag |
34320614 |
T |
 |
| Q |
601 |
ttctgggaaaatagttaaatccctttgtggaaaaaccgaagctcctccatcaagtaaaggaaaaggtaatactaataaccctttatcttcttcttcttct |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34320613 |
ttctgggaaaatagttaaatccctttgtggaaaaacagaagctcctccatcaagtaaaggaaaaggtaatactaataaccctttatcttcttcttcttct |
34320514 |
T |
 |
| Q |
701 |
tgtaatttttggttgatgatggaccaatcattcatgaagttgaaaatggttgacgcatcaccaattttgtgactcatgcaaatacttatcgccattcctc |
800 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34320513 |
tgtaatttttggttgatgatggaccaatcattcatgaagttgaaaatggttgacgcatcaccaattttgtgactcatgcaaatacttatcgccattcctc |
34320414 |
T |
 |
| Q |
801 |
cacatgcgaaacagttgatttgaacagctatcaaagtatcgctccaatccatgtctttccattgcaattcgtcgggaaacaaagggttcaatattttatc |
900 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34320413 |
cacatgcgaaacagttgatttgaacagctatcaaagtatcgctccaatccatgtctttccattgcaatttgtcgggaaacaaagggttcaatattttatc |
34320314 |
T |
 |
| Q |
901 |
tgtg |
904 |
Q |
| |
|
|||| |
|
|
| T |
34320313 |
tgtg |
34320310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 77 - 891
Target Start/End: Complemental strand, 34330045 - 34329231
Alignment:
| Q |
77 |
acccatgttggatttccccacccaaaatttgtttcatacattggaaacctacaccagctactaaaagtaaacaaattttcattttcgggatgaggctcag |
176 |
Q |
| |
|
|||||| |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||| ||||||| |||| || | || || ||||| |
|
|
| T |
34330045 |
acccatattggttttccccacccaaaatcagcttcatacattggaaacctacaccaactactaaaactaatcaaatttccattctcagaataagactcag |
34329946 |
T |
 |
| Q |
177 |
taacttgtttcaagcactcagatattaatgacaagttttcattctctttcgctccaaatgtttctggaataaagtcatcaaactgcgataacccttcttt |
276 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||| || ||||||| |||| |||||||| ||| |||| || |||| | | | |||||||||||||| |
|
|
| T |
34329945 |
taacttgtttcaagcattcagatatttttaacaaattatcattctttttccctccaaatatttttggataaacgtcacaacattcagataacccttcttt |
34329846 |
T |
 |
| Q |
277 |
tattttggataccaactcatgtaattccatttccttcttatctgcaaccatagacgagaaccaaacaatgtttcctgcacacttttcagacaatgcagga |
376 |
Q |
| |
|
||||||| ||||||| || | || ||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||| ||||||||||| | |||| |
|
|
| T |
34329845 |
tattttgcataccaaatcctttagttccatttccttcttatctgcaaacatagacgagaaccaaaatatgttccctacacatttttcagacaacggagga |
34329746 |
T |
 |
| Q |
377 |
accattcttttgcgaagatctacacccatgctaaataaagccgtctggaaatttaatcccattagtgaaactgcacgcttataaatccatgcagttactg |
476 |
Q |
| |
|
|||||||||||||||| ||| ||| |||| ||||| || | |||| ||||||||||||| ||| |||||| | | || |||||||||||||| || |
|
|
| T |
34329745 |
accattcttttgcgaaaatcaacagccatactaaacaatgatgtcttgaaatttaatcccgttattgaaaccgtgcatttgtaaatccatgcagtcacaa |
34329646 |
T |
 |
| Q |
477 |
cttgtacacgtgatggaggtgaatgcatagaactagaagttgctattgccttaagggacttgatcattgagggttgaaacacaaaccttttacacaccac |
576 |
Q |
| |
|
|||||||||||| |||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34329645 |
cttgtacacgtgtgggag---aatgcaccgaactagaagttgccattttcttaagggacttgatcattgagggttgaaacacaaatcttttacacaccac |
34329549 |
T |
 |
| Q |
577 |
attgttttttctcgttaacacaagttctgggaaaatagttaaatccctttgtggaaaaaccgaagctcctccatcaagtaaaggaaaaggtaatactaat |
676 |
Q |
| |
|
|||||||| |||| | | ||||||||| | ||||||| |||||| ||||||||||| | ||||||||||||||||| ||| |||| |||||| ||||| |
|
|
| T |
34329548 |
attgttttctctcttaagaacaagttcttgaaaaataggtaaatctctttgtggaaacattgaagctcctccatcaaggaaatgaaagggtaattctaat |
34329449 |
T |
 |
| Q |
677 |
aaccctttatcttcttcttcttctt---gtaatttttggttgatgatggaccaatcattcatgaagttgaaaatggttgacgcatcaccaattttgtgac |
773 |
Q |
| |
|
|||||||| ||| |||||| ||||| |||| |||| |||||| |||||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
34329448 |
aaccctttttctccttctttttcttttggtaaattttcgttgataatggaccaatcattcatgaagttgaaaagtgtcgaaccatcaccaattttgtgac |
34329349 |
T |
 |
| Q |
774 |
tcatgcaaatacttatcgccattcctccacatgcgaaacagttgatttgaacagctatcaaagtatcgctccaatccatgtctttccattgcaattcgtc |
873 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || ||||||||||| ||||||||||||||||| || |
|
|
| T |
34329348 |
tcatgcaaacacttatcgccattcctccacatgcaaaacagttgatttgaatggctattaaagtttcactccaatccatttctttccattgcaattcatc |
34329249 |
T |
 |
| Q |
874 |
gggaaacaaagggttcaa |
891 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
34329248 |
cgggaacaaagggttcaa |
34329231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 34333889 - 34333815
Alignment:
| Q |
333 |
agaaccaaacaatgtttcctgcacacttttcagacaatgcaggaaccattcttttgcgaagatctacacccatgc |
407 |
Q |
| |
|
||||||| || ||||||||| || |||| |||||||||| ||||||||||||| | |||||||| ||| |||||| |
|
|
| T |
34333889 |
agaaccatactatgtttcctacagacttatcagacaatggaggaaccattcttctacgaagatccacagccatgc |
34333815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 5 - 891
Target Start/End: Original strand, 36626859 - 36627727
Alignment:
| Q |
5 |
gcttcaatcccttctccatcttttgtatccatcagaaatattatgttccttgaagaacaaccaaaagtggtgacccatgttggatttccccacccaaaat |
104 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||| |||||| || ||||||||||| ||||| |||||||| |||| |||| |||||||| ||||||| |
|
|
| T |
36626859 |
gcttcaatcccatctccatctcttgtatccatcaaaaatataatattccttgaagacaaaccagtagtggtgatccatattggttttccccatccaaaat |
36626958 |
T |
 |
| Q |
105 |
ttgtttcatacattggaaacctacaccagctactaaaagtaaacaaattttcattttcgggatgaggctcagtaacttgtttcaagcactcagatattaa |
204 |
Q |
| |
|
|| |||||||||||||||||||||||| |||||||| ||||||||||||| ||| |||| || ||| || |||||||| |||||||| |||||||| |
|
|
| T |
36626959 |
ctgcttcatacattggaaacctacaccaactactaaacgtaaacaaatttttattctcggaataaggttctgtaacttgcttcaagcattcagatat--- |
36627055 |
T |
 |
| Q |
205 |
tgacaagttttcattctctttcgctccaaatgtttctggaataaagtcatcaaactgcgataacccttcttttattttggataccaactcatgtaattcc |
304 |
Q |
| |
|
|| | ||||||||| ||| |||| || |||| || || | | | | ||||||||||||||||| | | | ||||| || | || |||| |
|
|
| T |
36627056 |
------attattgttctctttctctctaaataattttggataaacgttacaacattcagataacccttcttttatctggcagaccaaatcttctagttcc |
36627149 |
T |
 |
| Q |
305 |
atttccttcttatctgcaaccatagacgagaaccaaacaatgtttcctgcacacttttcagacaatgcaggaaccattcttttgcgaagatctacaccca |
404 |
Q |
| |
|
||||||||||||| ||| | ||||||||| ||||||| ||||| ||| |||| | ||||||||||| ||||||||||||| | |||||||| ||| || |
|
|
| T |
36627150 |
atttccttcttatttgccaacatagacgaaaaccaaaatatgttccctacacaatgttcagacaatggaggaaccattcttctacgaagatcgacaatca |
36627249 |
T |
 |
| Q |
405 |
tgctaaataaagccgtctggaaatttaatcccattagtgaaactgcacgcttataaatccatgcagttactgcttgtacacgtgatggaggtgaatgcat |
504 |
Q |
| |
|
||||||| | ||||||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||| ||||||| | | ||| |||||||| |
|
|
| T |
36627250 |
tgctaaacattgccgtctggaaatttaaccccattattgaaacggcatgcttgtaaatccatgcagttacaacttgtacttgcgtggga---gaatgcat |
36627346 |
T |
 |
| Q |
505 |
agaactagaagttgctattgccttaagggacttgatcattgagggttgaaacacaaaccttttacacaccacattgttttttctcgttaacacaagttct |
604 |
Q |
| |
|
||||||||||| | ||||||||||| ||||| ||||||| |||||||| |||||||||||| | || |||||||||| | || ||| ||| | |||| |
|
|
| T |
36627347 |
ggaactagaagtcaccattgccttaagagacttaatcattgcaggttgaaaaacaaaccttttaaatacgacattgttttctttctttatcaccatttct |
36627446 |
T |
 |
| Q |
605 |
gggaaaatagttaaatccctttgtggaaaaaccgaagctcctccatcaagtaaaggaaaaggtaatactaataaccctttatcttcttcttcttcttgta |
704 |
Q |
| |
|
||||| |||| ||||||||||||||||||| | || ||| ||||||||||| || ||| ||||||||||| |||| || ||||| | || |
|
|
| T |
36627447 |
gggaagataggcaaatccctttgtggaaaaattgttgcccctgcatcaagtaaactcaagggtgatactaataac------tcttttttatcttcctcta |
36627540 |
T |
 |
| Q |
705 |
atttttggttgatgatggaccaatcattcatgaagttgaaaatggttgacgcatcaccaattttgtgactcatgcaaatacttatcgccattcctccaca |
804 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
36627541 |
tcttttggttgataatggcccaatcattcatgaatttgaaaatggttgaagcatcaccaattttgtgagtcatgcaaatacttattaccattcctccaca |
36627640 |
T |
 |
| Q |
805 |
tgcgaaacagttgatttgaacagctatcaaagtatcgctccaatccatgtctttccattgcaattcgtcgggaaacaaagggttcaa |
891 |
Q |
| |
|
|| || || || ||||||| ||||| ||| | | ||||||||||| ||||||||||| ||||| || || |||||||||||||| |
|
|
| T |
36627641 |
tgtaaaccaatttatttgaatggctataaaacttgctctccaatccatttctttccattgtaattcatcagggaacaaagggttcaa |
36627727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 263 - 891
Target Start/End: Original strand, 36632680 - 36633294
Alignment:
| Q |
263 |
gataacccttcttttattttggataccaactcatgtaattccatttccttcttatctgcaaccatagacgagaaccaaacaatgtttcctgcacactttt |
362 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| || |||||||||||||||| ||| | |||| |||| ||||| ||||| |||||||| |||| |
|
|
| T |
36632680 |
gataacccttcttttattttgcagaccaactcatctagctccatttccttcttatttgccaacatatacgaattgcaaactatgttccctgcacattttt |
36632779 |
T |
 |
| Q |
363 |
cagacaatgcaggaaccattcttttgcgaagatctacacccatgctaaataaagccgtctggaaatttaatcccattagtgaaactgcacgcttataaat |
462 |
Q |
| |
|
| ||||||| |||| |||||||||| | ||||| |||| |||||| ||| | ||||| ||||||||||| ||||||| |||||||| | |||| ||||| |
|
|
| T |
36632780 |
ccgacaatggaggatccattctttttctaagatttacagccatgcaaaacgacgccgtttggaaatttaaccccattattgaaactgtatgcttgtaaat |
36632879 |
T |
 |
| Q |
463 |
ccatgcagttactgcttgtacacgtgatggaggtgaatgcatagaactagaagttgctattgccttaagggacttgatcattgagggttgaaacacaaac |
562 |
Q |
| |
|
|||||||||||| |||||||| ||| ||| |||||||| ||||||||||| | ||||||||||| || |||||||||| |||||||| | |||| |
|
|
| T |
36632880 |
ccatgcagttacaacttgtacatgtgtggga---gaatgcatgaaactagaagttaccattgccttaagagatttgatcattgcaggttgaaaaaaaaac |
36632976 |
T |
 |
| Q |
563 |
cttttacacaccacattgttttttctcgttaacacaagttctgggaaaatagttaaatccctttgtggaaaaaccgaagctcctccatcaagtaaaggaa |
662 |
Q |
| |
|
|||||| | || |||||||||| |||| || | ||| |||||||||| || ||||||||||||||||||| |||||| ||||||||||| | |
|
|
| T |
36632977 |
cttttaaatacgacattgttttctctctttcccgcaatctctgggaaaacaggcaaatccctttgtggaaaaattattgctcctgcatcaagtaaactta |
36633076 |
T |
 |
| Q |
663 |
aaggtaatactaataaccctttatcttcttcttcttcttgtaatttttggttgatgatggaccaatcattcatgaagttgaaaatggttgacgcatcacc |
762 |
Q |
| |
|
| ||| ||||||||||| |||| | | ||||| || |||||||||| ||| ||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
36633077 |
agggtgatactaataac------tcttttccatcttcctg-----tttggttgatagtggcccaatcattcatgaagttgaaaacggttgaagcatcacc |
36633165 |
T |
 |
| Q |
763 |
aattttgtgactcatgcaaatacttatcgccattcctccacatgcgaaacagttgatttgaacagctatcaaagtatcgctccaatccatgtctttccat |
862 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||| ||||| ||| | | ||||||||||||||||||||| |
|
|
| T |
36633166 |
aattttgtgactcatgcaaatacttatagccattcctccacatgcaaagcagtttatttgaatggctataaaacttgcactccaatccatgtctttccat |
36633265 |
T |
 |
| Q |
863 |
tgcaattcgtcgggaaacaaagggttcaa |
891 |
Q |
| |
|
|| ||||| || || |||||||||||||| |
|
|
| T |
36633266 |
tgtaattcatcagggaacaaagggttcaa |
36633294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 4 - 635
Target Start/End: Original strand, 36621624 - 36622252
Alignment:
| Q |
4 |
agcttcaatcccttctccatcttttgtatccatcagaaatattatgttccttgaagaacaaccaaaagtggtgacccatgttggatttccccacccaaaa |
103 |
Q |
| |
|
||||||||| || ||||||||| |||||||||| |||| || | ||| |||||||||||||| |||||||| |||| |||| |||||||| |||||| |
|
|
| T |
36621624 |
agcttcaatgccatctccatctcttgtatccattagaagaatattattctttgaagaacaaccagtagtggtgatccatattggttttccccatccaaaa |
36621723 |
T |
 |
| Q |
104 |
tttgtttcatacattggaaacctacaccagctactaaaagtaaacaaattttcattttcgggatgaggctcagtaacttgtttcaagcactcagatatta |
203 |
Q |
| |
|
| || |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| ||||| || ||| |||| ||||||||||||||||| | |
|
|
| T |
36621724 |
tctgcttcatacattggaaacctacaccaactactaaaaccaaacacatttttattttcggattgaggttctgtagcttgcttcaagcactcagatatca |
36621823 |
T |
 |
| Q |
204 |
atgacaagttttcattctctttcgctccaaatgtttctggaataaagtcatcaaactgcgataacccttcttttattttggataccaactcatgtaattc |
303 |
Q |
| |
|
|||| || | ||| || || ||| ||| ||| ||| || |||| | | | ||||||||||||||||||||| |||||||||| | || || |
|
|
| T |
36621824 |
---acaaattgtttttccctatctctctaaacattttaggataaacgtcacaacattcagataacccttcttttattttgcataccaactcttctagttt |
36621920 |
T |
 |
| Q |
304 |
catttccttcttatctg-ca--accatagacgagaaccaaacaatgtttcctgcacacttttcagacaatgcaggaaccattcttttgcgaagatctaca |
400 |
Q |
| |
|
|||||||||||||| || || | ||||||||| ||||||| ||||| ||| |||| ||||||||||| | |||||||||||||||||| |||| ||| |
|
|
| T |
36621921 |
catttccttcttatttgtcatcatcatagacgaaaaccaaagtatgttccctacacatttttcagacaacggaggaaccattcttttgcgtagattcaca |
36622020 |
T |
 |
| Q |
401 |
cccatgctaaataaagccgtctggaaatttaatcccattagtgaaactgcacgcttataaatccatgcagttactgcttgtacacgtgatggaggtgaat |
500 |
Q |
| |
|
||||| ||| ||||||||||||||||||| ||||||| ||| || ||| |||| |||||||||||| |||| |||| || |||| ||| ||| |
|
|
| T |
36622021 |
accatgtaaaacgaagccgtctggaaatttaaccccattattgatacagcatgcttgtaaatccatgcaattacaacttgcacgcgtgtggga---gaag |
36622117 |
T |
 |
| Q |
501 |
gcatagaactagaagttgctattgccttaagggacttgatcattgagggttgaaacacaaaccttttacacaccacattgttttttctcgttaacacaag |
600 |
Q |
| |
|
|||| |||||||||||| | ||||||||||| ||||||||||| | |||||||| |||||||||||| || | |||||||||| |||| |||||||| |
|
|
| T |
36622118 |
gcatggaactagaagttaccattgccttaagagacttgatcatcgcaggttgaaaaacaaaccttttaaactcaacattgttttctctctttaacacatt |
36622217 |
T |
 |
| Q |
601 |
ttctgggaaaatagttaaatccctttgtggaaaaa |
635 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |
|
|
| T |
36622218 |
ttctgggaaaataggtaaatccctttgtggaaaaa |
36622252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 36632099 - 36632296
Alignment:
| Q |
4 |
agcttcaatcccttctccatcttttgtatccatcagaaatattatgttccttgaagaacaaccaaaagtggtgacccatgttggatttccccacccaaaa |
103 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||| |||||| || ||| |||||||||||||| |||||||| |||| |||| |||||||| |||||| |
|
|
| T |
36632099 |
agcttcaatcccatctccatctattgtatccatcaaaaatataatattctttgaagaacaaccagtagtggtgatccatattggttttccccatccaaaa |
36632198 |
T |
 |
| Q |
104 |
tttgtttcatacattggaaacctacaccagctactaaaagtaaacaaattttcattttcgggatgaggctcagtaacttgtttcaagcactcagatat |
201 |
Q |
| |
|
| || ||||||||| |||||||||||||| |||||||||||||||||||||| ||| || | || ||| | |||||||| ||||||||||||||||| |
|
|
| T |
36632199 |
tctgcttcatacatcggaaacctacaccaactactaaaagtaaacaaatttttattctccgaataaggttgtgtaacttgcttcaagcactcagatat |
36632296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 707 - 888
Target Start/End: Original strand, 36622306 - 36622487
Alignment:
| Q |
707 |
ttttggttgatgatggaccaatcattcatgaagttgaaaatggttgacgcatcaccaattttgtgactcatgcaaatacttatcgccattcctccacatg |
806 |
Q |
| |
|
||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| |||| |
|
|
| T |
36622306 |
ttttggtagataatggcccaatcattcatgaagttgaaaatggttgcagcatcaccaattttgtgactaatgcaaatacttattaccattcctccgcatg |
36622405 |
T |
 |
| Q |
807 |
cgaaacagttgatttgaacagctatcaaagtatcgctccaatccatgtctttccattgcaattcgtcgggaaacaaagggtt |
888 |
Q |
| |
|
| || || || | ||||| ||||| ||| | | ||||||||||| ||||||||||| ||||| || || ||||||||||| |
|
|
| T |
36622406 |
caaaccaatttacttgaatggctataaaactcgctctccaatccatttctttccattgtaattcatcagggaacaaagggtt |
36622487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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