View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20751_high_1 (Length: 305)
Name: NF20751_high_1
Description: NF20751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20751_high_1 |
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Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 32181698 - 32181408
Alignment:
| Q |
1 |
attatactcagctgttgtggtagtatttggaagataacatgaggattcagagagatattcaacatagttattttgaggtagttttggtaagaaattccac |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32181698 |
attatactcagctgttgtggcagtatttggaagataacatgaggattcagagagatattcaacatagttattttgaggtagttttggtaagaaattccac |
32181599 |
T |
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| Q |
101 |
tctatcccacttcttccaaagtattggttttgaatgtgatgttcctcagaaacatcatggttactggttccttcagcttcatatgatgctagctcagaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32181598 |
tctatcccacttcttccaaagtattggttttgaatgtgatgttcctcagaaacatcatggttactggttccttcagcttcatatgatgctagcttagaac |
32181499 |
T |
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| Q |
201 |
tgttctctttgttgttactttctccttccatannnnnnnnacactacaaagctaaacaagggttaaaggtaagaacttgagtattgaaaaa |
291 |
Q |
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|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32181498 |
tgttctctttgttgttactttctccttccatatttttttttcactactaagctaaacaagggttaaaggtaagaacttgagtattgaaaaa |
32181408 |
T |
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