View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20756_high_21 (Length: 277)

Name: NF20756_high_21
Description: NF20756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20756_high_21
NF20756_high_21
[»] chr1 (4 HSPs)
chr1 (19-263)||(15196280-15196524)
chr1 (19-263)||(15216698-15216942)
chr1 (19-266)||(15195629-15195876)
chr1 (19-266)||(15216047-15216294)
[»] scaffold1961 (1 HSPs)
scaffold1961 (42-266)||(1-225)
[»] chr5 (5 HSPs)
chr5 (25-266)||(17563169-17563410)
chr5 (19-266)||(17570265-17570512)
chr5 (37-266)||(17690807-17691036)
chr5 (63-266)||(17683907-17684110)
chr5 (63-266)||(17701991-17702194)
[»] chr7 (6 HSPs)
chr7 (25-266)||(14765189-14765430)
chr7 (19-266)||(14758023-14758270)
chr7 (36-266)||(14750118-14750348)
chr7 (25-266)||(14661151-14661392)
chr7 (37-266)||(14652716-14652945)
chr7 (63-266)||(14627299-14627502)
[»] chr8 (1 HSPs)
chr8 (60-144)||(24395644-24395728)


Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 263
Target Start/End: Original strand, 15196280 - 15196524
Alignment:
Q  19 aatcatagcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15196280 aatcatagcgctcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 15196379  T
Q  119 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15196380 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 15196479  T
Q  219 cgagtccttatctggtttgaataaataacattttctctccacagg 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15196480 cgagtccttatctggtttgaataaataacattttctctccacagg 15196524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 263
Target Start/End: Original strand, 15216698 - 15216942
Alignment:
Q  19 aatcatagcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15216698 aatcatagcgctcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 15216797  T
Q  119 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15216798 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 15216897  T
Q  219 cgagtccttatctggtttgaataaataacattttctctccacagg 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15216898 cgagtccttatctggtttgaataaataacattttctctccacagg 15216942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 15195629 - 15195876
Alignment:
Q  19 aatcatagcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 118  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| |||| ||  ||||| |||||||||||||||||||||| |||||||||||| ||    
T  15195629 aatcacagcactcaataaatttctgtgattcagcccggtagaactcggctggaagctgcagaaaaggattctcaaattcttgcacataaacggaaggtcc 15195728  T
Q  119 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 218  Q
    |||||||||||||||||||||||||| |||||||| |||| | | |||||||||||||||||||| ||||||||||||| || ||||| |||||||||||    
T  15195729 taaatccattagcatatttgttatatttctaatcacttttatgttaacaacttctccagcatagtacttgcatactaattcccaaagcgtattcgacaat 15195828  T
Q  219 cgagtccttatctggtttgaataaataacattttctctccacaggttc 266  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15195829 cgagtccttatctggtttgaataaataacattttcgctccacaggttc 15195876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 15216047 - 15216294
Alignment:
Q  19 aatcatagcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 118  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| |||| ||  ||||| |||||||||||||||||||||| |||||||||||| ||    
T  15216047 aatcacagcactcaataaatttctgtgattcagcccggtagaactcggctggaagctgcagaaaaggattctcaaattcttgcacataaacggaaggtcc 15216146  T
Q  119 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 218  Q
    |||||||||||||||||||||||||| |||||||| |||| | | |||||||||||||||||||| ||||||||||||| || ||||| |||||||||||    
T  15216147 taaatccattagcatatttgttatatttctaatcacttttatgttaacaacttctccagcatagtacttgcatactaattcccaaagcgtattcgacaat 15216246  T
Q  219 cgagtccttatctggtttgaataaataacattttctctccacaggttc 266  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15216247 cgagtccttatctggtttgaataaataacattttcgctccacaggttc 15216294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1961 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold1961
Description:

Target: scaffold1961; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 42 - 266
Target Start/End: Original strand, 1 - 225
Alignment:
Q  42 tgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatttgtta 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1 tgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatattcgtta 100  T
Q  142 tatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggtttgaata 241  Q
    | | ||||||||||||| ||| ||| |||||  |||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||    
T  101 tttttctaatcagttttttattaacgacttcctcagcatagtccttgcatattaatcccaaaagcatattcaaaaatcgagtccttatctggtttgaata 200  T
Q  242 aataacattttctctccacaggttc 266  Q
    |||||||||||||||||||||||||    
T  201 aataacattttctctccacaggttc 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 7e-58; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 25 - 266
Target Start/End: Complemental strand, 17563410 - 17563169
Alignment:
Q  25 agcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatc 124  Q
    |||||||||| ||| |||||||||||||||| |||||||||| |||| || |||| ||||||||||||||||||| |  ||||||||||||||||  |||    
T  17563410 agcactcaataaatatctgtgattcagcccgatagaactcagttgaagctagcagaaaaggattctcaaattcttccccataaacggaaggacctgtatc 17563311  T
Q  125 cattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtc 224  Q
     |||||||| |||||||||  ||||||||||  ||||| ||||||||| || |||   ||  ||| ||||||| |||||||||||||| ||| |||||||    
T  17563310 aattagcatctttgttatacttctaatcagtcctctattaacaacttcgccggcacgctcactgcgtactaattccaaaagcatattcaacagtcgagtc 17563211  T
Q  225 cttatctggtttgaataaataacattttctctccacaggttc 266  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  17563210 cttatctggtttgaatgaagaacattttctctccacaggttc 17563169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 266
Target Start/End: Complemental strand, 17570512 - 17570265
Alignment:
Q  19 aatcatagcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 118  Q
    ||||| ||||||| || |||||||| |||||||||| ||||||||||||||||||||| || || | | |||| |||||||||  |||||| |||| |||    
T  17570512 aatcacagcactcgataaatttctgagattcagccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctcataaacagaagaacc 17570413  T
Q  119 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 218  Q
    ||||||||||||||| ||||| |||| | ||||||||| | ||| |||| |||| ||||||   ||||||||||||||| |||||||||||||||||| |    
T  17570412 taaatccattagcatctttgtaatatttttaatcagttctatattaacatcttccccagcacgttccttgcatactaattccaaaagcatattcgacagt 17570313  T
Q  219 cgagtccttatctggtttgaataaataacattttctctccacaggttc 266  Q
    |||||||| ||||| ||||| ||||||||||| ||| |||||||||||    
T  17570312 cgagtcctgatctgttttgagtaaataacattctctgtccacaggttc 17570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 37 - 266
Target Start/End: Original strand, 17690807 - 17691036
Alignment:
Q  37 atttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatt 136  Q
    ||||||| |||||||||  |||  | |||||| |||||||||| |||||| |||||||| |||||  |||||| |||||||||||||| |||||||| ||    
T  17690807 atttctgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagcatctt 17690906  T
Q  137 tgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggttt 236  Q
    ||| | || ||||||||||| ||| | |||| |||| || |||   |||||| |||| ||  ||||||||||||||||||||||| ||||||||||||||    
T  17690907 tgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttgaatacaaactccaaaagcatattcgacaatcgattccttatctggttt 17691006  T
Q  237 gaataaataacattttctctccacaggttc 266  Q
    ||||||||||||||||||||||||||||||    
T  17691007 gaataaataacattttctctccacaggttc 17691036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 17683907 - 17684110
Alignment:
Q  63 tcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatttgttatatatctaatcagttttctat 162  Q
    |||||| |||||||||| |||||| ||||||||||||||  |||||| |||||||||||||| |||||||| ||||| | || ||||||||||| ||| |    
T  17683907 tcagctaaaacttgcagaaaaggagtctcaaattcttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgt 17684006  T
Q  163 caacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacag 262  Q
     |||| |||| || ||| | |||||  |||| ||  |||||||| ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  17684007 taacatcttccccggcacactccttaaatacaaactccaaaagcgtattcgacagttgagtccttatctggtttgaataaataacaatttctctccacag 17684106  T
Q  263 gttc 266  Q
    ||||    
T  17684107 gttc 17684110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 17701991 - 17702194
Alignment:
Q  63 tcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatttgttatatatctaatcagttttctat 162  Q
    |||||| |||||||||| |||||| |||||||| |||||  |||||| |||||||||||||| |||||||| ||||| | || ||||||||||| ||| |    
T  17701991 tcagctaaaacttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgt 17702090  T
Q  163 caacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacag 262  Q
     |||| |||| || |||   || ||   ||| ||  |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17702091 taacatcttccccggcacgctctttaagtacaaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacag 17702190  T
Q  263 gttc 266  Q
    ||||    
T  17702191 gttc 17702194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 266
Target Start/End: Original strand, 14765189 - 14765430
Alignment:
Q  25 agcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatc 124  Q
    |||||||||| ||| |||||||||||||||| |||||||||| |||| || |||| ||||||||||||||||||| |  ||||||||||||||||  |||    
T  14765189 agcactcaataaatatctgtgattcagcccgatagaactcagttgaagctagcagaaaaggattctcaaattcttcctcataaacggaaggacctgtatc 14765288  T
Q  125 cattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtc 224  Q
     |||||||| |||||||||  ||||||||||  ||||| ||||||||| || |||   ||  ||  ||||||| |||||||||||||| ||| |||||||    
T  14765289 aattagcatctttgttatacttctaatcagtcctctattaacaacttcgccggcacgctcactgtgtactaattccaaaagcatattcaacagtcgagtc 14765388  T
Q  225 cttatctggtttgaataaataacattttctctccacaggttc 266  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  14765389 cttatctggtttgaatgaagaacattttctctccacaggttc 14765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 14758023 - 14758270
Alignment:
Q  19 aatcatagcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacc 118  Q
    ||||| ||||||| || |||||||| |||||||||| ||||||||||||||||||||| || || | | |||| |||||||||   ||||| |||| |||    
T  14758023 aatcacagcactcgataaatttctgagattcagccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctcttaaacagaagaacc 14758122  T
Q  119 taaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaat 218  Q
    ||||||||||||||| ||||| |||| | ||||||||| | ||| |||| |||| ||||||   ||||||||||||||| |||||||||||||||||| |    
T  14758123 taaatccattagcatctttgtaatatttttaatcagttctatattaacatcttccccagcacgttccttgcatactaattccaaaagcatattcgacagt 14758222  T
Q  219 cgagtccttatctggtttgaataaataacattttctctccacaggttc 266  Q
    |||||||| ||||| ||||| ||||||||||| ||| |||||||||||    
T  14758223 cgagtcctgatctgttttgagtaaataacattctctgtccacaggttc 14758270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 266
Target Start/End: Original strand, 14750118 - 14750348
Alignment:
Q  36 aatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatat 135  Q
    |||||||| ||||||||||  |||||||||||||||||||| |  |||||| |||||||||||| |  ||||||  | |||||||||||||||||||| |    
T  14750118 aatttctgggattcagccctatagaactcagctgaaacttgtaaaaaaggagtctcaaattcttcctcataaacaaagggacctaaatccattagcatct 14750217  T
Q  136 ttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggtt 235  Q
    ||| || || ||||||| ||| ||||| |||| ||||  ||||||  |||||| |||| ||  |||||||| ||||||||| ||||||||||||||||||    
T  14750218 ttgatagatttctaatcggttctctattaacatcttccgcagcatgctccttgaatacaaactccaaaagcgtattcgacagtcgagtccttatctggtt 14750317  T
Q  236 tgaataaataacattttctctccacaggttc 266  Q
    ||||||||||||||| |||||||||||||||    
T  14750318 tgaataaataacattctctctccacaggttc 14750348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 266
Target Start/End: Complemental strand, 14661392 - 14661151
Alignment:
Q  25 agcactcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatc 124  Q
    ||||||||||  ||||||  |||||||||  |||  | |||||| |||||||||| |||||| ||||||||||||||  |||||| ||||||||||||||    
T  14661392 agcactcaatatatttctcagattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaattcttgctcataaacagaaggacctaaatc 14661293  T
Q  125 cattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtc 224  Q
     |||||||| ||||| | || ||||||||||| ||| | |||| |||| || |||   |||||| |||| ||  |||||||| ||||||||| |||||||    
T  14661292 aattagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttgaatacaaactccaaaagcgtattcgacagtcgagtc 14661193  T
Q  225 cttatctggtttgaataaataacattttctctccacaggttc 266  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14661192 cttatctggtttgaataaataacattttctctccacaggttc 14661151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 266
Target Start/End: Complemental strand, 14652945 - 14652716
Alignment:
Q  37 atttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatt 136  Q
    ||||||| |||||||||  |||  | |||||| |||||||||| |||||| |||||||| |||||  |||||| ||||||||||||||||| ||||| ||    
T  14652945 atttctgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatccatcagcatctt 14652846  T
Q  137 tgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggttt 236  Q
    ||| | || ||||||||||| ||| | |||| |||| || |||   |||||  |||| ||  |||||||| |||||||||||||||||||||||||||||    
T  14652845 tgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttaaatacaaactccaaaagcgtattcgacaatcgagtccttatctggttt 14652746  T
Q  237 gaataaataacattttctctccacaggttc 266  Q
    ||||||||||||||||||||||||||||||    
T  14652745 gaataaataacattttctctccacaggttc 14652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 14627502 - 14627299
Alignment:
Q  63 tcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatttgttatatatctaatcagttttctat 162  Q
    |||||| |||||||||| |||||| |||||||| |||||  |||||| |||||||||||||| |||||||| ||||| | || ||||||||||| ||| |    
T  14627502 tcagctaaaacttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgt 14627403  T
Q  163 caacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacag 262  Q
     |||| |||| || |||   || ||  |||| ||  |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14627402 taacatcttccccggcacgctctttaaatacaaactccaaaagcgtattcgacaatcgattccttatctggtttgaataaataacattttctctccacag 14627303  T
Q  263 gttc 266  Q
    ||||    
T  14627302 gttc 14627299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 24395644 - 24395728
Alignment:
Q  60 aactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatttgttatat 144  Q
    ||||||||||||||||| || ||| ||  |||||| |||||   |||||| |  |||||||||||||||||||| ||||||||||    
T  24395644 aactcagctgaaacttgaagaaaatgagcctcaaaatcttgaccataaacagctggacctaaatccattagcatttttgttatat 24395728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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