View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20756_high_25 (Length: 236)
Name: NF20756_high_25
Description: NF20756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20756_high_25 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 12049753 - 12049626
Alignment:
| Q |
1 |
cgccggaaaattcgacctcacccattcccaactccatgaattagtcgaatctgcagctaatcatctcatctccgctggaatcaaacccaacgatgtcgtc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12049753 |
cgccggaaaattcgacctcacccattcccaactccatgaattagtcgaatctgcagctaatcatctcatctccgctggaatcaaacccaacgatgtcgtc |
12049654 |
T |
|
| Q |
101 |
gctctcaccttccccaacaccatcgagg |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
12049653 |
gctctcaccttccccaacaccatcgagg |
12049626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University