View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20756_high_6 (Length: 479)

Name: NF20756_high_6
Description: NF20756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20756_high_6
NF20756_high_6
[»] chr3 (24 HSPs)
chr3 (16-176)||(49644331-49644491)
chr3 (21-176)||(36177181-36177336)
chr3 (18-167)||(15877730-15877879)
chr3 (47-172)||(28939675-28939800)
chr3 (16-170)||(53464264-53464418)
chr3 (383-463)||(49644048-49644129)
chr3 (18-170)||(52313856-52314008)
chr3 (41-170)||(35424128-35424257)
chr3 (14-169)||(29096076-29096232)
chr3 (37-159)||(1995568-1995690)
chr3 (72-170)||(11467227-11467325)
chr3 (36-171)||(35496098-35496233)
chr3 (44-172)||(40793171-40793298)
chr3 (69-173)||(49786966-49787070)
chr3 (98-172)||(7352091-7352165)
chr3 (70-154)||(45266862-45266947)
chr3 (18-106)||(7352575-7352663)
chr3 (76-172)||(35846187-35846281)
chr3 (70-167)||(14898436-14898533)
chr3 (97-167)||(33103991-33104061)
chr3 (66-124)||(20809639-20809697)
chr3 (96-173)||(4489817-4489894)
chr3 (97-161)||(20207073-20207137)
chr3 (100-144)||(45240855-45240899)
[»] chr6 (10 HSPs)
chr6 (18-176)||(10682476-10682633)
chr6 (31-158)||(2844121-2844248)
chr6 (70-168)||(34427053-34427151)
chr6 (70-171)||(30349201-30349302)
chr6 (44-171)||(19763539-19763665)
chr6 (41-118)||(30775346-30775423)
chr6 (44-171)||(19789229-19789355)
chr6 (45-107)||(31602139-31602201)
chr6 (47-124)||(13685396-13685473)
chr6 (95-172)||(6313997-6314071)
[»] chr4 (23 HSPs)
chr4 (15-170)||(46381990-46382145)
chr4 (18-170)||(23559987-23560139)
chr4 (18-174)||(55875811-55875967)
chr4 (16-172)||(52326980-52327136)
chr4 (16-172)||(55875967-55876123)
chr4 (18-170)||(779867-780019)
chr4 (47-172)||(17476181-17476306)
chr4 (18-165)||(5415149-5415296)
chr4 (18-165)||(38567945-38568092)
chr4 (16-172)||(41377353-41377509)
chr4 (76-172)||(9268362-9268457)
chr4 (18-169)||(30052344-30052496)
chr4 (42-108)||(43264451-43264517)
chr4 (76-172)||(2681079-2681174)
chr4 (15-175)||(37556208-37556367)
chr4 (16-132)||(43354935-43355050)
chr4 (43-172)||(7907379-7907504)
chr4 (18-170)||(48262962-48263118)
chr4 (18-151)||(19485772-19485908)
chr4 (65-169)||(34388820-34388924)
chr4 (392-458)||(23811636-23811702)
chr4 (18-124)||(30875387-30875493)
chr4 (106-170)||(4974593-4974657)
[»] scaffold0867 (1 HSPs)
scaffold0867 (18-176)||(3485-3627)
[»] scaffold0015 (1 HSPs)
scaffold0015 (16-170)||(56561-56715)
[»] chr1 (20 HSPs)
chr1 (16-176)||(16679880-16680040)
chr1 (16-170)||(23570980-23571134)
chr1 (16-173)||(50428448-50428605)
chr1 (18-172)||(43496370-43496524)
chr1 (18-170)||(7900128-7900280)
chr1 (18-170)||(37457596-37457748)
chr1 (16-172)||(51613224-51613380)
chr1 (16-160)||(1035715-1035859)
chr1 (18-170)||(19993349-19993501)
chr1 (72-170)||(19322793-19322891)
chr1 (16-166)||(47394340-47394492)
chr1 (70-165)||(27641543-27641638)
chr1 (76-172)||(46823604-46823699)
chr1 (16-172)||(7167968-7168124)
chr1 (76-172)||(26707096-26707191)
chr1 (64-155)||(10574351-10574442)
chr1 (87-176)||(19466340-19466428)
chr1 (54-93)||(30784690-30784729)
chr1 (16-165)||(30717402-30717551)
chr1 (96-168)||(29058575-29058647)
[»] chr7 (25 HSPs)
chr7 (47-170)||(43598799-43598922)
chr7 (19-173)||(36725761-36725915)
chr7 (18-172)||(48252859-48253013)
chr7 (18-162)||(44396369-44396513)
chr7 (18-173)||(43692521-43692676)
chr7 (70-172)||(40160313-40160415)
chr7 (14-168)||(49080734-49080887)
chr7 (18-169)||(38346378-38346530)
chr7 (25-170)||(32485437-32485573)
chr7 (52-156)||(8099629-8099733)
chr7 (72-166)||(38994815-38994909)
chr7 (70-169)||(36118058-36118156)
chr7 (54-172)||(8404755-8404872)
chr7 (77-151)||(23869931-23870005)
chr7 (47-116)||(41159367-41159436)
chr7 (68-124)||(12879277-12879333)
chr7 (16-90)||(23772819-23772892)
chr7 (14-174)||(46700822-46700982)
chr7 (110-168)||(41159461-41159519)
chr7 (48-136)||(22790435-22790523)
chr7 (97-160)||(29681460-29681523)
chr7 (101-169)||(23774569-23774637)
chr7 (93-133)||(37626914-37626954)
chr7 (102-162)||(42691361-42691421)
chr7 (18-158)||(49081222-49081362)
[»] chr5 (20 HSPs)
chr5 (16-172)||(34769540-34769696)
chr5 (16-170)||(39060167-39060321)
chr5 (77-170)||(4925098-4925191)
chr5 (42-176)||(23089292-23089426)
chr5 (37-169)||(14593856-14593988)
chr5 (18-119)||(35211935-35212036)
chr5 (18-141)||(10523804-10523927)
chr5 (16-125)||(37902402-37902512)
chr5 (71-133)||(34383709-34383771)
chr5 (18-118)||(35205123-35205223)
chr5 (76-136)||(9959324-9959384)
chr5 (54-132)||(2907778-2907856)
chr5 (19-109)||(14947657-14947747)
chr5 (97-169)||(7011792-7011864)
chr5 (41-141)||(14913456-14913556)
chr5 (85-136)||(38697910-38697961)
chr5 (18-85)||(38698221-38698288)
chr5 (41-115)||(10924281-10924355)
chr5 (110-170)||(35205242-35205302)
chr5 (110-170)||(35211849-35211909)
[»] chr2 (23 HSPs)
chr2 (72-176)||(8322139-8322243)
chr2 (47-172)||(40095762-40095887)
chr2 (19-170)||(6858965-6859116)
chr2 (10-172)||(32914430-32914592)
chr2 (16-169)||(37069875-37070029)
chr2 (41-164)||(9104566-9104689)
chr2 (16-174)||(3739456-3739613)
chr2 (42-163)||(14657492-14657612)
chr2 (18-170)||(33386646-33386793)
chr2 (21-169)||(38609893-38610040)
chr2 (107-176)||(7394951-7395020)
chr2 (11-144)||(18565739-18565872)
chr2 (69-170)||(39375681-39375782)
chr2 (18-112)||(7395456-7395550)
chr2 (42-138)||(4897246-4897342)
chr2 (42-138)||(4944640-4944736)
chr2 (43-175)||(5147101-5147232)
chr2 (68-172)||(29984906-29985010)
chr2 (18-107)||(29794379-29794468)
chr2 (18-131)||(43490502-43490616)
chr2 (97-174)||(3384731-3384808)
chr2 (114-173)||(13250507-13250566)
chr2 (16-92)||(37258125-37258201)
[»] chr8 (13 HSPs)
chr8 (19-170)||(40278938-40279089)
chr8 (18-172)||(18226971-18227125)
chr8 (18-172)||(35158845-35158999)
chr8 (79-176)||(5191314-5191411)
chr8 (18-170)||(1156246-1156398)
chr8 (20-166)||(11425461-11425606)
chr8 (18-158)||(37479177-37479317)
chr8 (76-172)||(9682332-9682427)
chr8 (76-172)||(17312824-17312919)
chr8 (76-172)||(27594239-27594334)
chr8 (18-168)||(45251430-45251579)
chr8 (49-170)||(30234946-30235067)
chr8 (97-132)||(34954345-34954380)
[»] scaffold0110 (2 HSPs)
scaffold0110 (18-169)||(13773-13925)
scaffold0110 (18-169)||(21510-21662)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 7e-81; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 49644491 - 49644331
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49644491 taagagtatccacatttattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 49644392  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49644391 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 49644331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 36177336 - 36177181
Alignment:
Q  21 gcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactaca 120  Q
    |||||||||||||| ||||| |||||| |||| |||||||  ||||| ||||| |||||||||||||||||||  ||||||||| ||||||||| |||||    
T  36177336 gcatccacattcatgccacctatatggatggtataaatgggtcccacataatagattatattacttcacactttccaattatttgaaccactcatctaca 36177237  T
Q  121 tttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
    ||||| |||||| ||| ||||||||  ||||||||||||||| |||||||||||||    
T  36177236 ttttttaaatattcataccactcatttaaaactctaaaatggatcccactaaattc 36177181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 15877730 - 15877879
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| || ||| ||| ||||||||||||||||| |||||||  ||||| ||||| |||||||||||||||| || || ||||||||||||||||||||    
T  15877730 agagcacccccatccataccacccatatgggtggtataaatgggtcccacataatacattatattacttcacatttttccattatttaaaccactcaact 15877829  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtccc 167  Q
    | |||||  |||||||||| |||||| |||||||||||||||||||||||    
T  15877830 atattttctaaatatccataccactcctccaaaactctaaaatgggtccc 15877879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 28939675 - 28939800
Alignment:
Q  47 ggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatc 146  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| |||  ||||||||    
T  28939675 ggtggtataaatagaccccacctaatatattatattacttcacacttctcaattatttaaactactcaactacattttctaaatattcatatcactcatc 28939774  T
Q  147 caaaactctaaaatgggtcccactaa 172  Q
    |||||||||| ||| |||||||||||    
T  28939775 caaaactctacaattggtcccactaa 28939800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 53464264 - 53464418
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||| |||||| ||| ||||||| ||||||||| |||||||  ||||| || || |||||||||||| ||||||   | |||||||||||||||||    
T  53464264 taagagcacccacatccatgccacccaaatgggtggtataaatgggacccacatattacattatattactttacactttctagttatttaaaccactcaa 53464363  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||||||  |||||||||| ||||||  | |||||||||||||||||||||||    
T  53464364 ctacattttctaaatatccataccactcccctaaaactctaaaatgggtcccact 53464418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 49644129 - 49644048
Alignment:
Q  383 agtgcagttggtaataaattgagaaggcaaatgatattttgtttgaaaaagtgttggtgaagcaat-aaaaaataacaaagg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  49644129 agtgcagttggtaataaattgagaaggcaaatgatattttgtttgaaaaagtgttggtgaaacaataaaaaaataacaaagg 49644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 52313856 - 52314008
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||||| ||||||||| |||||||  ||||| || || |||||||||||| ||||||   | |||||||||||||||||||    
T  52313856 agagcacccacatccatgccacccaaatgggtggtataaatgggacccacatattacattatattactttacactttctagttatttaaaccactcaact 52313955  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||||  |||||||||| ||||||  | |||||||||||||||||||||||    
T  52313956 acattttctaaatatccataccactcccctaaaactctaaaatgggtcccact 52314008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 35424128 - 35424257
Alignment:
Q  41 catatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgcca 140  Q
    |||||| ||||| |||||||  | ||| ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||| |||    
T  35424128 catatgagtggtataaatgggtctcacataatacattatattacttcacatttttcaattatttaaaccactcaactacattttctaaatatccatacca 35424227  T
Q  141 ctcatccaaaactctaaaatgggtcccact 170  Q
    | | || |||||||||||||||||| ||||    
T  35424228 cccttctaaaactctaaaatgggtctcact 35424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 29096076 - 29096232
Alignment:
Q  14 agtaagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatatta-tattacttcacacttctcaattatttaaaccact 112  Q
    ||||||||||||||||| ||   |||||| || | |||| ||||||||||||||  ||||||| | |||||||||||| || ||||||||||||||||||    
T  29096076 agtaagagcatccacatccacatcacccacattgatggtataaatggaccccacacaatatataactattacttcacatttttcaattatttaaaccact 29096175  T
Q  113 caactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    |||||||||| || |||||| ||| ||||||||  ||||||||||| | ||||||||    
T  29096176 caactacattatttaaatattcataccactcatttaaaactctaaattaggtcccac 29096232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 1995568 - 1995690
Alignment:
Q  37 cacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccat 136  Q
    |||||||| || |||| |||||||  ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||    
T  1995568 cacccatacggatggtataaatgggtcccacataatacattatattacttcacacttcccaattatttaaaccacttaactacattttctaaatatccat 1995667  T
Q  137 gccactcatccaaaactctaaaa 159  Q
     |||||| |  ||||||||||||    
T  1995668 accactcctttaaaactctaaaa 1995690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 11467227 - 11467325
Alignment:
Q  72 tatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||  ||||| || |||| ||||||||||||| ||||    
T  11467227 tatattatattacttcacacttctcaattatttaaaccaatcaactacattttctaaatatccatatcactcctctaaaattctaaaatgggtctcact 11467325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 35496098 - 35496233
Alignment:
Q  36 ccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatcca 135  Q
    ||||| ||||| ||||| |||||||  || || ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  ||| ||||    
T  35496098 ccacctatatgagtggtataaatgggtcctacataatatattatattacttcacacttctcaattatttaaatcattcaactacatttttttaatttcca 35496197  T
Q  136 tgccactcatccaaaactctaaaatgggtcccacta 171  Q
    | | |||| || || ||||||||||  |||||||||    
T  35496198 tactactcttctaatactctaaaataagtcccacta 35496233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 40793171 - 40793298
Alignment:
Q  44 atgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactc 143  Q
    ||||||||| ||||||||  |||| |||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||  |||||| |||  |||||    
T  40793171 atgggtggtataaatggattccacgtaatactttatattacttctcacttttcaattatttaaaccactcaactacattttataaatattcatatcactc 40793270  T
Q  144 atccaaaactctaaaatgggtcccactaa 172  Q
     | ||||||| || ||||| |||||||||    
T  40793271 ttacaaaact-tacaatggatcccactaa 40793298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 49786966 - 49787070
Alignment:
Q  69 taatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccca 168  Q
    ||||||||||||||| |||  || |||||||||||||||||||||||||| |||||  |||||| ||| ||||||||| |||||| |||||||||| |||    
T  49786966 taatatattatattatttcttacatctcaattatttaaaccactcaactatattttataaatattcataccactcatctaaaactttaaaatgggttcca 49787065  T
Q  169 ctaaa 173  Q
     ||||    
T  49787066 ttaaa 49787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 7352165 - 7352091
Alignment:
Q  98 attatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||||||||||| |||||||||||||| |||||| ||| |||| |||   ||||||||||||||||||||||||    
T  7352165 attatttaaaccattcaactacattttttaaatattcataccacccattataaactctaaaatgggtcccactaa 7352091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 45266947 - 45266862
Alignment:
Q  70 aatatattatattacttcacacttctcaattatttaaaccactcaacta-catttttcaaatatccatgccactcatccaaaactc 154  Q
    |||| ||||||||| ||||||||||||||| |||||||||||| ||||| ||||||  |||||| ||| |||| ||||||||||||    
T  45266947 aatacattatattatttcacacttctcaatcatttaaaccactaaactagcattttctaaatattcataccacccatccaaaactc 45266862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 7352663 - 7352575
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaa 106  Q
    ||||||||||||| |||  ||||||| |||||||| |||| ||  ||||| ||||| |||||||||| ||||||||| |||||||||||    
T  7352663 agagcatccacatccatgtcacccatttgggtggtataaacgggtcccacataatacattatattacctcacacttcccaattatttaa 7352575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 35846187 - 35846281
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||| || |||||| |||||||||||||||| |||||||||||||  |||||||| | |||||| | ||||||| || |||||||||||||||    
T  35846187 ttatattattttacacttttcaattatttaaaccattcaactacattttctaaatatcc-taccactcttacaaaact-tacaatgggtcccactaa 35846281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 14898533 - 14898436
Alignment:
Q  70 aatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccc 167  Q
    |||| ||||||||| || ||| || |||||| ||||||||||| |||||||||||  |||||| ||| ||||| || |||||||||||| || |||||    
T  14898533 aatacattatattattttacatttttcaattgtttaaaccactaaactacattttctaaatattcataccacttattcaaaactctaaattgagtccc 14898436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 33104061 - 33103991
Alignment:
Q  97 aattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccc 167  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||| ||| ||||   | |||||||||||    
T  33104061 aattatttaaacaactcaactacatttttaaaatatccataccacttatctaaaaaaattaaatgggtccc 33103991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 20809639 - 20809697
Alignment:
Q  66 acttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttt 124  Q
    ||||||||| ||||||||||||| |||| | |||||||||||| ||| ||||| |||||    
T  20809639 acttaatattttatattacttcatactttttaattatttaaacaacttaactatatttt 20809697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 4489894 - 4489817
Alignment:
Q  96 caattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaa 173  Q
    |||||||||| ||||||||| || |||||  ||||||  || ||||||||  ||||||||||||||||| ||| ||||    
T  4489894 caattatttataccactcaattatattttataaatatttataccactcatttaaaactctaaaatgggttccattaaa 4489817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 20207073 - 20207137
Alignment:
Q  97 aattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatg 161  Q
    |||||||||||| ||||||| |||||||  |||||| |||   |||||| |||||||||||||||    
T  20207073 aattatttaaacaactcaaccacattttctaaatattcataaaactcattcaaaactctaaaatg 20207137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 45240899 - 45240855
Alignment:
Q  100 tatttaaaccactcaactacatttttcaaatatccatgccactca 144  Q
    ||||||||||||| ||||| |||||||||||||| || |||||||    
T  45240899 tatttaaaccacttaactatatttttcaaatatctataccactca 45240855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 2e-72; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 10682633 - 10682476
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10682633 agagcatccacattcattccacccatatggatggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 10682534  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  10682533 acatttttcaaatatccatgtcactcat-aaaaactctaaaatgggtcccactaaattc 10682476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 2844248 - 2844121
Alignment:
Q  31 tcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaat 130  Q
    |||| ||||| ||||||||||| ||||||     ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  2844248 tcatgccaccgatatgggtggtataaatgagtttcacataatacattatattacttcacacttcccaattatttaaaccactcaactacattttttaaat 2844149  T
Q  131 atccatgccactcatccaaaactctaaa 158  Q
    || ||| | ||||||| |||||||||||    
T  2844148 attcatactactcatctaaaactctaaa 2844121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 34427151 - 34427053
Alignment:
Q  70 aatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccca 168  Q
    |||||||||| |||||| |||||||| |||||||||||| |||||||||| ||||| |||||| ||||||||| |||||||| | ||||||||||||||    
T  34427151 aatatattatgttacttaacacttcttaattatttaaactactcaactactttttttaaatatgcatgccactaatccaaaattttaaaatgggtccca 34427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 30349201 - 30349302
Alignment:
Q  70 aatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||||||||||||||||||| ||||||||| ||||||||| | |||| || | |||| ||||| || | ||||||||||||||||| | ||||||||||||    
T  30349201 aatatattatattacttcatacttctcaaatatttaaacaattcaattataattttgaaatacccgttccactcatccaaaactccacaatgggtcccac 30349300  T
Q  170 ta 171  Q
    ||    
T  30349301 ta 30349302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 19763539 - 19763665
Alignment:
Q  44 atgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactc 143  Q
    ||||||||| ||| |||  ||||| |||||| ||||||||||||||||||  ||||||||||||||||| || ||||||||  |||||| ||| ||||||    
T  19763539 atgggtggtataactgggtcccacgtaatattttatattacttcacactttccaattatttaaaccacttaattacattttctaaatattcataccactc 19763638  T
Q  144 atccaaaactctaaaatgggtcccacta 171  Q
     | ||||||| || ||||||| ||||||    
T  19763639 ttacaaaact-tacaatgggttccacta 19763665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 30775346 - 30775423
Alignment:
Q  41 catatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaacta 118  Q
    ||||| |||||| |||||||  || || ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  30775346 catataggtggtataaatgggtcctacataatacattatattacttcacacttttcaattatttaaaccactcaacta 30775423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 19789229 - 19789355
Alignment:
Q  44 atgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactc 143  Q
    ||||||||| ||| |||  ||||| |||||| |||||||||  ||||||| ||||||||||||| |||| || ||||||||  |||||| |||  |||||    
T  19789229 atgggtggtataactgggtcccacgtaatattttatattacgccacacttttcaattatttaaatcacttaattacattttctaaatattcatatcactc 19789328  T
Q  144 atccaaaactctaaaatgggtcccacta 171  Q
     | ||||||| || ||||||||||||||    
T  19789329 ttacaaaact-tacaatgggtcccacta 19789355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 31602139 - 31602201
Alignment:
Q  45 tgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaa 107  Q
    |||||||| ||||| |||| || | ||||| |||||||| |||||||||||||||||||||||    
T  31602139 tgggtggtataaatagacctcattcaatattttatattaattcacacttctcaattatttaaa 31602201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 13685396 - 13685473
Alignment:
Q  47 ggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttt 124  Q
    |||||| |||||||  ||||| ||||| ||||||||| || | |||| ||||||||||||| |||||||||| |||||    
T  13685396 ggtggtataaatgggtcccacataatacattatattattttatacttttcaattatttaaaacactcaactatatttt 13685473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 6313997 - 6314071
Alignment:
Q  95 tcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||||||||||||   |||||||||||||| |||||| |||  ||||| | ||||||||||||||| ||| ||||||    
T  6313997 tcaattatttaaac---tcaactacattttttaaatattcatagcactctttcaaaactctaaaatgagtctcactaa 6314071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 7e-47; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 46382145 - 46381990
Alignment:
Q  15 gtaagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactca 114  Q
    |||||||||||||||| ||| |||||||  | |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||     
T  46382145 gtaagagcatccacatccatgccacccaatttggtggtataaatggaccctacttaatatattatattagttcacacttctcaattatttaaaccactcc 46382046  T
Q  115 actacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||| ||||||||||||| ||| ||||| ||| |||||| ||||||||||||||||    
T  46382045 actatatttttcaaatattcataccacttatctaaaactttaaaatgggtcccact 46381990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 23559987 - 23560139
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||||| ||||||||| |||||||  ||||| |||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  23559987 agagcacccacatccatgccacccaaatgggtggtataaatgggacccacataatatattacattactttacactttccaattatttaaaccactcaact 23560086  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||||  ||||||||||||||||| || |||||||||||||||||||||||    
T  23560087 acattttctaaatatccatgccactcctctaaaactctaaaatgggtcccact 23560139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 55875967 - 55875811
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| |||||||| || || || |||||||  ||||| ||||| ||||||||||||||||  ||||||||| |||||||||||||||    
T  55875967 agagcatccacatccataccacccatgtgtgtagtataaatgggtcccacataataaattatattacttcacatctctcaattacttaaaccactcaact 55875868  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaat 174  Q
    |||||||| |||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  55875867 acattttttaaatattcataccactcatctaaaactctaaaatgggtcccactaaat 55875811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 52327136 - 52326980
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||| |||||| ||| ||||||||||| || || |||||||  ||||| |||||| |||||||||||||||||| ||||||||||||| |||||||    
T  52327136 taagagcagccacatccatgccacccatatgagtagtataaatgggtcccacataatattttatattacttcacacttttcaattatttaaatcactcaa 52327037  T
Q  116 ctacatttttc-aaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||| |||||||||||    
T  52327036 ctacatttttctaaatatccataccactc-tccaaaactctaaaataggtcccactaa 52326980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 55875967 - 55876123
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||||||||| ||| | ||| || | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  55875967 taagagcatccacatccatactacctattttggtggtataaatggaccctacttaatatattatattacttcacacttctcaattatttaaactattcaa 55876066  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||| |||  |||||||||| || |||| ||||||||||| ||| |||||||||||    
T  55876067 ctacactttctaaatatccatacccctcacccaaaactctacaattggtcccactaa 55876123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 779867 - 780019
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||||||||||||||| |||||||  | ||| ||||| |||||||||||||||| || || ||||||||||||||||||||    
T  779867 agagcacccacatccataccacccatatgggtggtataaatgggtctcacataatacattatattacttcacatttttccattatttaaaccactcaact 779966  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    | |||||  |||||||||| |||||| ||||||| ||||||||||||||||||    
T  779967 atattttctaaatatccataccactcctccaaaattctaaaatgggtcccact 780019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 17476306 - 17476181
Alignment:
Q  47 ggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatc 146  Q
    |||||| |||||||||||||||| |||||||||||| ||||||| ||  |||||||||| || |||||||||||||||  |||||||||| |||||||||    
T  17476306 ggtggtataaatggaccccacttgatatattatatttcttcacattttccaattatttagacaactcaactacattttctaaatatccataccactcatc 17476207  T
Q  147 caaaactctaaaatgggtcccactaa 172  Q
    ||||| | |||||||| |||||||||    
T  17476206 caaaattttaaaatggatcccactaa 17476181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 5415149 - 5415296
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||||| |||| |||| |||||||   |||| |||||||||||||||||| ||||||| |||||||||||  |||||||||    
T  5415149 agagcaaccacatccatgccacccaaatggatggtataaatgggatccacataatatattatattactttacacttcccaattatttaactcactcaact 5415248  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtc 165  Q
    |||||||  |||||| ||| |||||| || ||||||||||||||||||    
T  5415249 acattttctaaatattcataccactcctctaaaactctaaaatgggtc 5415296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 38568092 - 38567945
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| ||||  | || |||||| | |||||||| |||| ||||||||||||||||||  |||| |||||||||||||||||||||||    
T  38568092 agagcatccacatccatgccacttacattggtggtatgaatggacctcactcaatatattatattacttcttacttttcaattatttaaaccactcaact 38567993  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtc 165  Q
    |||||||| |||||| ||| |||||  || |||||| |||||||||||    
T  38567992 acattttttaaatattcataccactattctaaaactttaaaatgggtc 38567945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 41377509 - 41377353
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||||||| | |||  |||| |||||| | || |||||||  |  || ||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  41377509 taagagcatccacttccatgtcacctatatggatagtataaatgggtcttacataatatattatattacttcccacttctcaattattttaactactcaa 41377410  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||||| |||||| ||| | |||| |  |||||||| ||||||||||||||||    
T  41377409 ctacattttttaaatattcatactactcttttaaaactcttaaatgggtcccactaa 41377353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 9268362 - 9268457
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||| ||| || | ||||||| || |||||||||||||||    
T  9268362 ttatattacttcacacttttcaattatttaaaccactcaactacattttctaaacatccataccattcttacaaaact-tataatgggtcccactaa 9268457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 30052496 - 30052344
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatatta-tattacttcacacttctcaattatttaaaccactcaac 116  Q
    ||||||||||||| ||| ||||||| || | | || ||||| ||||||||  ||||| | | |||||||||| | || | |||||||||||||| |||||    
T  30052496 agagcatccacatccataccacccacattgatagtataaatagaccccacacaatatttaaatattacttcatattttttaattatttaaaccaatcaac 30052397  T
Q  117 tacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||||||||| |||||||||| | ||||||| ||||||||||| || |||||||    
T  30052396 tacattttttaaatatccatactactcatctaaaactctaaattgagtcccac 30052344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 43264451 - 43264517
Alignment:
Q  42 atatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaac 108  Q
    ||||| ||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  43264451 atatgagtggtataaatggacctcacctaatatattatattacttcacacttctcaattatttaaac 43264517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 2681174 - 2681079
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||  ||| |||||| ||| || | ||||||| || |||||||||||||||    
T  2681174 ttatattacttcacacttttcaattatttaaaccactcaactacatcttctaaacatccataccattcttacaaaact-tataatgggtcccactaa 2681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 37556208 - 37556367
Alignment:
Q  15 gtaagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactca 114  Q
    ||||||||| |||||| ||| ||||  ||||| ||||| ||||| ||||||  ||||| | ||||| || | |||| ||||||||||||||||| |||||    
T  37556208 gtaagagcacccacatccataccacttatatgagtggtataaatagaccccgtttaattttttataatattacacatttctcaattatttaaactactca 37556307  T
Q  115 actacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaatt 175  Q
    |||| |||||| |||||||||| | ||||||| || | |||| ||| ||| ||||||||||    
T  37556308 actatatttttaaaatatccatactactcatctaata-tctacaataggttccactaaatt 37556367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 43354935 - 43355050
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||||||||| |||  ||  ||||| | |||| ||||| ||| ||||| ||||||||||||||||| |||| | |||||||||||||||||||||    
T  43354935 taagagcatccacatccatgacattcatattgatggtataaatagactccactcaatatattatattactttacacct-tcaattatttaaaccactcaa 43355033  T
Q  116 ctacatttttcaaatat 132  Q
     ||||||||| ||||||    
T  43355034 ttacattttttaaatat 43355050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 7907504 - 7907379
Alignment:
Q  43 tatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccact 142  Q
    |||||||||| |||||||  ||||| |||||  |||||   ||||||||||  |||||||||||||||||||||||||||||  ||||||||||  ||||    
T  7907504 tatgggtggtataaatgggtcccacataatactttata---cttcacactttccaattatttaaaccactcaactacattttctaaatatccatatcact 7907408  T
Q  143 catccaaaactctaaaatgggtcccactaa 172  Q
    | ||||||||| |||||||| || ||||||    
T  7907407 cttccaaaact-taaaatggatctcactaa 7907379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 48262962 - 48263118
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattata---ttacttcacacttctcaattatttaaaccactc- 113  Q
    ||||||||||||| ||| ||||||| |||| |||| ||||||   | ||| ||||||||||||   |||||| |||||| ||||||||||||| || |      
T  48262962 agagcatccacatccatgccacccaaatggatggtataaatgagactcacataatatattatactattactttacacttttcaattatttaaatcatttt 48263061  T
Q  114 aactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||||||||  |||||| ||| |||||| || |||||||||||||||||| ||||    
T  48263062 aactacattttctaaatattcataccactcctctaaaactctaaaatgggtctcact 48263118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 19485908 - 19485772
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccact---taatatattatattacttcacacttctcaattatttaaaccactca 114  Q
    |||||| |||||| |||  || ||||||||||||| ||||||||| |||||   ||||| ||||||||| || |||||| | |||||||||||||| |||    
T  19485908 agagcacccacatccatgtcatccatatgggtggtataaatggactccactacttaatacattatattattttacactttttaattatttaaaccattca 19485809  T
Q  115 actacatttttcaaatatccatgccactcatccaaaa 151  Q
      ||||||||  |||||| | | ||||||||| ||||    
T  19485808 cttacattttctaaatattcgtaccactcatctaaaa 19485772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 34388820 - 34388924
Alignment:
Q  65 cacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggt 164  Q
    |||| |||| ||||||||| || ||| || |||||||||||||||||| ||| |||||||  |||||| |||  ||||||||| ||| |||||| ||| |    
T  34388820 cactgaatacattatattattttacatttttcaattatttaaaccactaaaccacattttctaaatattcatatcactcatcccaaattctaaattggat 34388919  T
Q  165 cccac 169  Q
    |||||    
T  34388920 cccac 34388924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 458
Target Start/End: Original strand, 23811636 - 23811702
Alignment:
Q  392 ggtaataaattgagaaggcaaatgatattttgtttgaaaaagtgttggtgaagcaataaaaaataac 458  Q
    |||||||| |||| |||| || ||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  23811636 ggtaataatttgaaaaggtaattgacattttgtttcaaaaagtgtttgtgaaacaataaaaaataac 23811702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 30875493 - 30875387
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||  ||||||| ||||| ||||||   |||||| |||| ||||||||| || | ||||| |||||||||||| |||| ||||    
T  30875493 agagcacccacatccatgccttccatatgtgtggtataaatgagtcccactgaatacattatattattttaaacttcccaattatttaaatcactaaact 30875394  T
Q  118 acatttt 124  Q
    | |||||    
T  30875393 atatttt 30875387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 4974657 - 4974593
Alignment:
Q  106 aaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    ||||||||||||| |||||  |||||| ||| |||||| || ||||||||||||| |||| ||||    
T  4974657 aaccactcaactatattttctaaatattcataccactcctcaaaaactctaaaataggtctcact 4974593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 3627 - 3485
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||                 |    
T  3627 agagcatccacattcattccacccatatgggtggtttaaatagaccccacttaatatattatattacttcacacttctcaat----------------at 3544  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3543 atatttttcaaatatccatgccactcatccaaaactctaaaatggatcccactaaattc 3485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 56715 - 56561
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||| |||||| ||| ||| ||| |||| |||| |||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  56715 taagagcaaccacatccatgccatccaaatggatggtataaatgggacccacataatatattatattactttacacttctcaattatttaaaccactcaa 56616  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||||||  |||||||||| |||||| || |||||||||| ||||||||||||    
T  56615 ctacattttctaaatatccataccactcctctaaaactctaatatgggtcccact 56561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 16679880 - 16680040
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||||||||||  || |||| |||||||||||| | |||||||| |||    ||||||||||||||||||||||||||||||||| ||||| ||||    
T  16679880 taagagcatccacatcaatgccactcatatgggtggtatcaatggacctcaccctgtatattatattacttcacacttctcaattattttaaccattcaa 16679979  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
     |||||||||||||||| ||| |||||||| |||||||||||||||| ||| |||||||||    
T  16679980 ttacatttttcaaatatacataccactcattcaaaactctaaaatggatcctactaaattc 16680040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 23571134 - 23570980
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||| || ||| ||| ||||||||||||||||| |||||||  ||||| ||||| |||||||||||||||| || || ||||||||||| ||||||    
T  23571134 taagagcacccgcatccataccacccatatgggtggtataaatgggtcccacataatacattatattacttcacatttttccattatttaaacaactcaa 23571035  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    ||| |||||| |||||||||| |||||| ||||||||||||||||| ||||||||    
T  23571034 ctatattttttaaatatccataccactcctccaaaactctaaaatgagtcccact 23570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 50428605 - 50428448
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||||||| || |||  ||  |||||||||||| |||||||| | |||  |||| ||||||||||||||||||||||||||||||||| |||||||    
T  50428605 taagagcatccatatccatgtcattcatatgggtggtataaatggatctcacgcaataaattatattacttcacacttctcaattatttaaatcactcaa 50428506  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaa 173  Q
    ||| |||||  |||||||||| |||||| |||||||||||||| ||||||||||||||    
T  50428505 ctatattttctaaatatccataccactcctccaaaactctaaagtgggtcccactaaa 50428448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 43496370 - 43496524
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| |||||||| ||| |||| |||| ||  ||||| ||||| |||||||||| ||||||||||||||||||||||| | ||||||    
T  43496370 agagcatccacatccatgccacccatttggatggtataaacgggtcccacataatacattatattacctcacacttctcaattatttaaactattcaact 43496469  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||| |||||||||| |||| |||   ||||||||||||||||||||||||    
T  43496470 acattttttaaatatccataccacccattataaactctaaaatgggtcccactaa 43496524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 7900128 - 7900280
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||| | |||| | || |||||||  ||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  7900128 agagcacccacatccatgccacctaaatggatcgtataaatgggacccacataatatattatattactttatacttcccaattatttaaaccactcaact 7900227  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||||  |||||||||| |||||| || |||||||||||||||||||||||    
T  7900228 acattttctaaatatccataccactcctctaaaactctaaaatgggtcccact 7900280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 37457596 - 37457748
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||  |||||||||| |||||| |||||||  ||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||||    
T  37457596 agagcatccacatccacaccacccatataggtggtataaatgggtcccacgtaatacaatatattatttcacacttctcaattattaaaaccactcaact 37457695  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    | |||||  |||||| ||| |||||| ||||||||| |||||| |||||||||    
T  37457696 atattttctaaatatacataccactcttccaaaactttaaaataggtcccact 37457748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 51613224 - 51613380
Alignment:
Q  16 taagagcatccacattcattccaccc-atatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactca 114  Q
    |||||||||| ||||||||  ||| | ||||| ||||| |||||||| ||||| |||||  ||||||||||||||||||  |||||||||||||||||||    
T  51613224 taagagcatctacattcatgtcactctatatgagtggtataaatggatcccacataataatttatattacttcacactttccaattatttaaaccactca 51613323  T
Q  115 actacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||||||||  |||||  ||| |||||| ||||||||| ||||||||||||||||||    
T  51613324 actacattttctaaatactcataccactcttccaaaact-taaaatgggtcccactaa 51613380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 1035715 - 1035859
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||||||||| ||| |||| |||||||||||| || ||||  ||||  ||||| | ||||||| |||||||||||||||||||||||||||| ||    
T  1035715 taagagcatccacatccataccactcatatgggtggtatatatgggtcccatgtaatacaatatattatttcacacttctcaattatttaaaccactaaa 1035814  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaat 160  Q
    ||| |||||  |||||| ||| |||||| ||||||||| ||||||    
T  1035815 ctatattttctaaatatacataccactcttccaaaactttaaaat 1035859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 19993501 - 19993349
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| | || || ||||||||| || ||||   |||| |||||||||||||||||| |||||| | |||||||||||||||||||||    
T  19993501 agagcatccacatccatgcaactcaaatgggtggtatagatgggatccacataatatattatattactttacactttttaattatttaaaccactcaact 19993402  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    | |||||  |||||||||| |||||| || ||||||||||||| |||| ||||    
T  19993401 atattttctaaatatccataccactcctctaaaactctaaaataggtcacact 19993349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 19322891 - 19322793
Alignment:
Q  72 tatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||| |||||  |||||||||||||||| | |||||||    
T  19322891 tatattatattactacatacttctcaattatttaaaccattcaactacattttttaaatatccataccacttctccaaaactctaaaatagatcccact 19322793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 47394340 - 47394492
Alignment:
Q  16 taagagcatccacattcattccac--ccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactc 113  Q
    ||||||||||||||| ||| ||||  |||| || || || |||||||   |||| ||||| |||||||||||||||||||| ||||||||||||| ||||    
T  47394340 taagagcatccacatccataccacacccatttgagtagtataaatgggttccacataatacattatattacttcacacttcccaattatttaaactactc 47394439  T
Q  114 aactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcc 166  Q
      |||||||||| |||||| ||| |||||| || |||| ||||||||||||||    
T  47394440 gtctacattttttaaatattcataccactcttctaaaagtctaaaatgggtcc 47394492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 27641543 - 27641638
Alignment:
Q  70 aatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtc 165  Q
    |||| ||||||||| |||| |||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||||| |||||| |||||||||||    
T  27641543 aatacattatattagttcatacttctcagttatttaaaccacccaactaaattttccaaatatccataccactcatctaaaactttaaaatgggtc 27641638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 46823699 - 46823604
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||| ||| || | ||||||| || |||||||||||||||    
T  46823699 ttatattacttcacacttttcaattatttaaaccactcaactacattttctaaacatccataccattcttacaaaact-tataatgggtcccactaa 46823604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 7168124 - 7167968
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||  ||||| |||  |||||||||| || || |||||||  | ||| |||||| ||||||||||| ||| ||  |||||||||||||||| |||    
T  7168124 taagagcactcacatccatgtcacccatatgagtagtataaatgggtctcacataatattttatattactttacattttccaattatttaaaccacccaa 7168025  T
Q  116 ctacatttttc-aaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||||||||| |||||||||  | |||| |||||||||||||||| |||| ||||||    
T  7168024 ctacatttttctaaatatccacacgactc-tccaaaactctaaaataggtctcactaa 7167968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 26707191 - 26707096
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||||  |||||| ||| |||||| | ||||||| || |||| ||||||||||    
T  26707191 ttatattagttcacacttttcaattatttaaaccattcaactacattttctaaatattcataccactcttacaaaact-tacaatgagtcccactaa 26707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 10574442 - 10574351
Alignment:
Q  64 ccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactct 155  Q
    |||| ||||||| |||||||||||||| |||||||||||||||| ||||||| || |||||| |||||| ||| | ||||||| || |||||    
T  10574442 ccacataatataatatattacttcacatttctcaattatttaaatcactcaattatattttttaaatattcatactactcatctaatactct 10574351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 19466340 - 19466428
Alignment:
Q  87 cacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
    |||||||||||||||||||||| |||| |||| |||||| ||||||| || | |||||||||| | |||| ||| |||||||||||||||    
T  19466340 cacacttctcaattatttaaactactccactatattttttaaatatcaatactactcatccaata-tctacaataggtcccactaaattc 19466428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 30784729 - 30784690
Alignment:
Q  54 taaatggaccccacttaatatattatattacttcacactt 93  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  30784729 taaatggaccccacttgatatattatatttcttcacactt 30784690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 30717402 - 30717551
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||| |||||| ||| ||| | |||||| |||  ||||||||||| | | |||| ||||||||| || |  ||| | |||||||||||  |||||     
T  30717402 taagagcacccacatccataccatctatatggatggaataaatggaccctattcaatacattatattattttatgctttttaattatttaaattactcac 30717501  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtc 165  Q
     ||||||||| |||||| |||||| || ||| |||| | |||||| ||||    
T  30717502 ttacattttttaaatattcatgccgcttatctaaaattttaaaataggtc 30717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 29058647 - 29058575
Alignment:
Q  96 caattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccca 168  Q
    |||||||||||| |||||||  ||||| || |||||| ||| |||||| || |||| | ||||||||||||||    
T  29058647 caattatttaaatcactcaatcacattctttaaatattcataccactcttctaaaattttaaaatgggtccca 29058575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 43598922 - 43598799
Alignment:
Q  47 ggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatc 146  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||    
T  43598922 ggtggtataaatggaccctacttaatatattatattagttcacacttctcaattatttaaaccactcaactatatttttcaaatattcataccactcatc 43598823  T
Q  147 caaaactctaaaatgggtcccact 170  Q
     |||||| ||||||| ||| ||||    
T  43598822 taaaactttaaaatgagtctcact 43598799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 36725915 - 36725761
Alignment:
Q  19 gagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaacta 118  Q
    |||||||||||| ||| |||| || ||||||||| |||||||| ||||||||||   |||||||| || |||||||||||||||||||||||||||||||    
T  36725915 gagcatccacatccataccactcacatgggtggtataaatggatcccacttaattctttatattattttacacttctcaattatttaaaccactcaacta 36725816  T
Q  119 catttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaa 173  Q
    || |||  |||||| ||| ||| ||||| ||||||||||||||||||| ||||||    
T  36725815 caatttctaaatattcataccattcatcaaaaactctaaaatgggtcctactaaa 36725761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 48253013 - 48252859
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||||||||| || || |||||||  ||||  |||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  48253013 agagcacccacatccatgccacccatatgagtagtataaatgggtcccatataatattttatattacttcacactttccaattatttaaaccactcaact 48252914  T
Q  118 acatttttc-aaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||||||| |||||||||| |||||| |||||||||||||||| ||| |||||||    
T  48252913 acatttttctaaatatccataccactc-tccaaaactctaaaataggtaccactaa 48252859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 44396513 - 44396369
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||||| |||| |||| |||||||   |||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  44396513 agagcaaccacatccatgccacccaaatggatggtataaatgggatccacataatatattatattactttacacttcccaattatttaacccactcaact 44396414  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgg 162  Q
    |||||||  |||||| ||| |||||| || |||||||||||||||    
T  44396413 acattttctaaatattcataccactcctctaaaactctaaaatgg 44396369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 43692676 - 43692521
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||||||| |||||| |||| ||| ||  |||| ||||| |  ||||| ||||| ||||||||| |||||||||||||||||||||||||||||| ||    
T  43692676 agagcatccatattcataccactcatttgaatggtataaataggtcccacataatacattatattatttcacacttctcaattatttaaaccactcatct 43692577  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaa 173  Q
    | |||||| ||||||  || |||||| || |||||| |||||||||||||| ||||    
T  43692576 aaattttttaaatatttataccactcttctaaaactttaaaatgggtcccattaaa 43692521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 40160415 - 40160313
Alignment:
Q  70 aatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||| | |||| |||||||||| | || ||||||||| | |||||||| ||||||    
T  40160415 aatatattatattacttaacgcttctcaattatttaaacaactcaactaaaatttttaaatatccatactacccatccaaaattttaaaatggatcccac 40160316  T
Q  170 taa 172  Q
    |||    
T  40160315 taa 40160313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 49080734 - 49080887
Alignment:
Q  14 agtaagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactc 113  Q
    |||||||||| |||||| |||  || ||||||| || || |||||||  |  || ||||||||||||||||||||||||| ||||||||||||||||||     
T  49080734 agtaagagcacccacatccatgtcatccatatgagttgtataaatgggtcttacataatatattatattacttcacacttttcaattatttaaaccact- 49080832  T
Q  114 aactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccca 168  Q
     ||||||||||| ||||||| || | | || || || ||||||||||||||||||    
T  49080833 tactacattttttaaatatcaatactaatcttctaatactctaaaatgggtccca 49080887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 38346378 - 38346530
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatatta-tattacttcacacttctcaattatttaaaccactcaac 116  Q
    ||||||||||||| |||  || ||| || | |||| |||||||||||||  |||||||| | |||||||||| | || | ||||||||||||||||||||    
T  38346378 agagcatccacatccatatcatccacattgatggtataaatggaccccatataatatataaatattacttcatattttttaattatttaaaccactcaac 38346477  T
Q  117 tacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||||||||| ||||||  || | ||||||| |||||| |||| ||||||||||    
T  38346478 tacattttttaaatatttatacaactcatctaaaactttaaattgggtcccac 38346530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 32485437 - 32485573
Alignment:
Q  25 ccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttt 124  Q
    |||||| ||| |||| ||||| |||||| | |||||  ||||| ||||| ||||||||||||||| ||||| |||||||||||||||| | ||           
T  32485437 ccacatccataccactcatatcggtggtatcaatgggtcccacataatacattatattacttcacgcttcttaattatttaaaccacttatct------- 32485529  T
Q  125 tcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
      |||||||||| |||||| ||||||||||||||||||||||||||    
T  32485530 --aaatatccataccactcctccaaaactctaaaatgggtcccact 32485573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 8099629 - 8099733
Alignment:
Q  52 tttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaa 151  Q
    |||| |||||| |||||||||||||||||||||||||||||| | |||  ||||||  | |||||||||||||| ||||||  || | ||||||||||||    
T  8099629 tttatatggactccacttaatatattatattacttcacacttttgaatattttaaataattcaactacattttttaaatatttatacaactcatccaaaa 8099728  T
Q  152 ctcta 156  Q
    |||||    
T  8099729 ctcta 8099733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 38994815 - 38994909
Alignment:
Q  72 tatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcc 166  Q
    ||||||||||||||||| |||| |||||| ||||||  | |||| ||||||||| |||||||||| | |||||||||||| | ||||||||||||    
T  38994815 tatattatattacttcatacttgtcaattttttaaataattcaattacatttttgaaatatccatacaactcatccaaaattttaaaatgggtcc 38994909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 36118058 - 36118156
Alignment:
Q  70 aatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    |||| ||||||||| || ||||||||| |||||||||||||||||| ||||||||  |||||| ||| | |||| | ||||||| |||||||||||||||    
T  36118058 aatacattatattatttaacacttctctattatttaaaccactcaattacattttctaaatattcatactactc-ttcaaaactttaaaatgggtcccac 36118156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 8404755 - 8404872
Alignment:
Q  54 taaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaact 153  Q
    |||||||  ||||| |||||  |||||||| |||||||||  |||||||||||||||||||| ||||||||| |||||||||  |||||| | | |||||    
T  8404755 taaatgggtcccacgtaatactttatattatttcacactttccaattatttaaaccactcaattacattttttaaatatccacaccactcttacgaaact 8404854  T
Q  154 ctaaaatgggtcccactaa 172  Q
     || ||||| |||||||||    
T  8404855 -tacaatggatcccactaa 8404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 23870005 - 23869931
Alignment:
Q  77 tatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaa 151  Q
    ||||||||||||||||| |||||| ||||||| ||| ||||| |||||  |||||||||| ||||||||||||||    
T  23870005 tatattacttcacacttttcaattttttaaactacttaactatattttctaaatatccataccactcatccaaaa 23869931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 41159367 - 41159436
Alignment:
Q  47 ggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaac 116  Q
    |||||| ||||||||| ||||| |||||||||||||| |||||||||  ||||||||||||| |||||||    
T  41159367 ggtggtataaatggacgccactcaatatattatattatttcacactttccaattatttaaacaactcaac 41159436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 12879277 - 12879333
Alignment:
Q  68 ttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttt 124  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||    
T  12879277 ttaatattttatattacttcacacttctcaattatttaaacaacacaactatatttt 12879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 23772819 - 23772892
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcaca 90  Q
    ||||||||||||||| |||  ||  |||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  23772819 taagagcatccacatccatgtcattcatatgggtggtataaatgga-cccacttaatatattatattatttcaca 23772892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 46700982 - 46700822
Alignment:
Q  14 agtaagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactc 113  Q
    ||||||||||| ||||| |||  || ||||||| || || |||||||  | ||||||||   ||||| || ||||||||||||||||||||||||||||     
T  46700982 agtaagagcatacacatccatgtcatccatatgagttgtataaatggctctcacttaattctttatactatttcacacttctcaattatttaaaccacta 46700883  T
Q  114 aactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaat 174  Q
     | || |||||  |||||| ||| | |||||| |||||   || ||||| |||||||||||    
T  46700882 tattatattttctaaatattcatactactcattcaaaaaattacaatggatcccactaaat 46700822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 41159461 - 41159519
Alignment:
Q  110 actcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccca 168  Q
    ||||||| |||||||  |||||||||| |||| ||||||||||||| ||||||||||||    
T  41159461 actcaaccacattttctaaatatccataccacccatccaaaactctcaaatgggtccca 41159519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 22790435 - 22790523
Alignment:
Q  48 gtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccat 136  Q
    ||||| |||||||| | |||  ||||| || ||||| || || ||| |||||||||||||| | ||||||||||||||| |||||||||    
T  22790435 gtggtataaatggatctcacacaatattttgtattattttacgcttttcaattatttaaacaattcaactacatttttctaatatccat 22790523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 29681460 - 29681523
Alignment:
Q  97 aattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaat 160  Q
    |||||||| ||||||| |||||||||||  ||||||||||  |||||||| |||| ||||||||    
T  29681460 aattatttgaaccacttaactacattttataaatatccatatcactcatctaaaattctaaaat 29681523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 23774569 - 23774637
Alignment:
Q  101 atttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    |||||||||||||||||| | |||  |||||| ||| |||   ||||||||||||||||||| ||||||    
T  23774569 atttaaaccactcaactatactttcaaaatattcataccatctatccaaaactctaaaatggatcccac 23774637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 37626954 - 37626914
Alignment:
Q  93 tctcaattatttaaaccactcaactacatttttcaaatatc 133  Q
    |||||||||||||||| ||||||||| |||||| |||||||    
T  37626954 tctcaattatttaaacaactcaactatattttttaaatatc 37626914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 42691421 - 42691361
Alignment:
Q  102 tttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgg 162  Q
    ||||||| |||||||||||||||| |||||| ||| ||||||||  |||| | ||||||||    
T  42691421 tttaaacgactcaactacattttttaaatattcataccactcatttaaaattttaaaatgg 42691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 49081362 - 49081222
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||  ||| ||| |||||||||| | |||| |||||||  | ||  ||||| ||||||||| || | | || ||||||||||||| || ||| ||    
T  49081362 agagcatcagcatccataccacccatatagatggtataaatgggtctcatataatacattatattattttatatttttcaattatttaaatcattcatct 49081263  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaa 158  Q
    |||||||  ||||||  || ||||||||| |||||| ||||    
T  49081262 acattttctaaatatttataccactcatctaaaactttaaa 49081222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 34769696 - 34769540
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||||||||| ||| ||| |||| |||||||| |||| ||  ||||| ||||| |||||||||| ||||||||| ||||||||||||||| ||||    
T  34769696 taagagcatccacatccatgccatccatttgggtggtataaacgggtcccacataatacattatattacctcacacttcccaattatttaaaccattcaa 34769597  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||||| |||||||||| |||| |||   ||||||||||||||||||||||||    
T  34769596 ctacattttttaaatatccataccacccattataaactctaaaatgggtcccactaa 34769540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 39060167 - 39060321
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||||| |||||| |||  |||| ||||||||||| |||||||  ||||| ||||| ||||||||||||||||||| || ||||||||||||||||||    
T  39060167 taagagcacccacatacatatcacctatatgggtggtataaatgggtcccacataatacattatattacttcacacttttcgattatttaaaccactcaa 39060266  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    ||| |||||  ||||||||||  ||||| || |||||| |||||| |||||||||    
T  39060267 ctatattttctaaatatccatatcactcctctaaaactttaaaataggtcccact 39060321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 77 - 170
Target Start/End: Original strand, 4925098 - 4925191
Alignment:
Q  77 tatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||| |||| ||||    
T  4925098 tatattacttcacacttttcaattatttaaaccactcaactacattttttaaatatccatatcactcttccaaaactctaaaataggtctcact 4925191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 23089426 - 23089292
Alignment:
Q  42 atatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccac 141  Q
    |||||| |||| |||||||| ||||  ||||||||||||||| |||||| ||  |||||||||||| |||||| | |||||||| |||||| ||| ||||    
T  23089426 atatggatggtataaatggatcccatataatatattatattatttcacattttccaattatttaaatcactcatccacattttttaaatattcataccac 23089327  T
Q  142 tcatccaaaactctaaaatgggtcccactaaattc 176  Q
    ||||| |||||| ||||||| ||||||||||||||    
T  23089326 tcatctaaaactttaaaatgagtcccactaaattc 23089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 14593856 - 14593988
Alignment:
Q  37 cacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccat 136  Q
    ||||||||||  |||| ||||||||| ||||| |||||||||||||||||||||  |||||||||||||||||| |||| ||||||||  |||||| |||    
T  14593856 cacccatatgaatggtataaatggactccactcaatatattatattacttcacaaatctcaattatttaaaccattcaattacattttataaatattcat 14593955  T
Q  137 gccactcatccaaaactctaaaatgggtcccac 169  Q
     |||||| | || |||| |||||| ||||||||    
T  14593956 accactctttcataactgtaaaataggtcccac 14593988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 35212036 - 35211935
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||||||| ||||||| || |||||| |||||||  ||||| || ||||||||||||||| ||||||| || |||||||||||||||||||    
T  35212036 agagcatccacattcatgccacccaaataggtggtataaatgggtcccacatattatattatattactttacacttcccagttatttaaaccactcaact 35211937  T
Q  118 ac 119  Q
    ||    
T  35211936 ac 35211935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 10523804 - 10523927
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| |||  ||||||||| |||||| ||||||||||||||| |||| ||||||||| || |||||| | ||||||||||||||||||  |    
T  10523804 agagcacccacatccatgtcacccatattggtggtataaatggaccccactcaatacattatattattttacactttttaattatttaaaccactcactt 10523903  T
Q  118 acatttttcaaatatccatgccac 141  Q
    |||||||  |||||| ||| ||||    
T  10523904 acattttctaaatattcataccac 10523927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 37902512 - 37902402
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaatta-tttaaaccactca 114  Q
    |||||||| |||||| ||| |||||||||| |||||| ||||||   ||||| | |||||||||||||||| ||||||||||| || ||||||| |||||    
T  37902512 taagagcaaccacatccatgccacccatattggtggtataaatgagacccacattatatattatattactttacacttctcaaatattttaaactactca 37902413  T
Q  115 actacattttt 125  Q
    |||||||||||    
T  37902412 actacattttt 37902402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 34383771 - 34383709
Alignment:
Q  71 atatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatc 133  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||||||  |||||||    
T  34383771 atatattatattactttacacttctcaattatttaaaccacaaaactacattttctaaatatc 34383709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 35205123 - 35205223
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| ||| || ||| ||||||| || |||||| |||||||  ||||| || ||||||||||||||| ||||||| || |||||||||| ||||||||    
T  35205123 agagcacccaaatccatgccacccaaataggtggtataaatgggtcccacatattatattatattactttacacttcccagttatttaaacaactcaact 35205222  T
Q  118 a 118  Q
    |    
T  35205223 a 35205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 9959384 - 9959324
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccat 136  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||  ||||||||||    
T  9959384 ttatactacttcacactttccaattatttaaactactcaactacattttctaaatatccat 9959324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 2907778 - 2907856
Alignment:
Q  54 taaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatat 132  Q
    ||||||||||| ||  ||||| ||| ||||||||||| |||  |||||||||||| |||||||| ||||||| ||||||    
T  2907778 taaatggaccctacacaatattttacattacttcacatttcctaattatttaaacaactcaacttcatttttaaaatat 2907856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 14947657 - 14947747
Alignment:
Q  19 gagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaacc 109  Q
    ||||| |||||| |||  || |||||| | |||| |||||||| ||||| |||||| ||||||||||| | |||| |||||||||||||||    
T  14947657 gagcacccacatccatgtcatccatatagatggtataaatggatcccacataatattttatattactttatacttttcaattatttaaacc 14947747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 7011792 - 7011864
Alignment:
Q  97 aattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||||||||||| ||  |||||||||||||||||||| |||  |||| ||| ||||||||||| || |||||||    
T  7011792 aattatttaaagcagccaactacatttttcaaatattcatatcacttatctaaaactctaaattgagtcccac 7011864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 14913456 - 14913556
Alignment:
Q  41 catatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgcca 140  Q
    |||||||||||| |||||||  |  ||| |||| ||||||||| || |||||| |||||||||||||| ||| ||||| |||||  |||||| ||| |||    
T  14913456 catatgggtggtataaatgggtcatactaaatacattatattattttacacttttcaattatttaaactactaaactatattttctaaatattcatacca 14913555  T
Q  141 c 141  Q
    |    
T  14913556 c 14913556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 38697961 - 38697910
Alignment:
Q  85 ttcacacttctcaattatttaaaccactcaactacatttttcaaatatccat 136  Q
    |||||||||| | |||||||||||| |||||||| |||||| ||||||||||    
T  38697961 ttcacacttccctattatttaaacctctcaactaaattttttaaatatccat 38697910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 38698288 - 38698221
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattact 85  Q
    ||||||||||||| ||| | || |||||| ||||| |||||||| |||||| |||| |||||||||||    
T  38698288 agagcatccacatccatactactcatatgagtggtataaatggatcccactgaatacattatattact 38698221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 10924355 - 10924281
Alignment:
Q  41 catatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    |||||| ||||| ||||| ||||||| | |||| | |||||||||||| |||| | ||||||| |||||||||||    
T  10924355 catatgagtggtataaattgaccccaatcaataaaatatattacttcatactttttaattattcaaaccactcaa 10924281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 35205242 - 35205302
Alignment:
Q  110 actcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||| ||||||||  |||||||||| ||||||  | ||||||||||||||| |||||||    
T  35205242 actcaattacattttctaaatatccataccactcccctaaaactctaaaatggctcccact 35205302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 35211909 - 35211849
Alignment:
Q  110 actcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    |||||| ||||||||  |||||||||| ||||||  | ||||||||||||||| |||||||    
T  35211909 actcaattacattttctaaatatccataccactcccctaaaactctaaaatggctcccact 35211849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 8322243 - 8322139
Alignment:
Q  72 tatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccacta 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||  |||||||||    
T  8322243 tatattatattacttcacacttttcaattatttaaaccactcaattacatttttcaaatattcataccactcatccaaaactctaaaataagtcccacta 8322144  T
Q  172 aattc 176  Q
    |||||    
T  8322143 aattc 8322139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 40095887 - 40095762
Alignment:
Q  47 ggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatc 146  Q
    |||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||| |    
T  40095887 ggtggtataaatggaccccatctaatatattatattactttacacttctcaattatttaaactactcaactacattttttaaatattcataccactcacc 40095788  T
Q  147 caaaactctaaaatgggtcccactaa 172  Q
    ||||| |||| ||| |||||||||||    
T  40095787 caaaattctagaattggtcccactaa 40095762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 6858965 - 6859116
Alignment:
Q  19 gagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaacta 118  Q
    |||||||||||| ||| ||||||||||||||||| |||||||  ||||| ||||| | |||||||||||||||||| ||||||||||||||||| |||||    
T  6858965 gagcatccacatccataccacccatatgggtggtataaatgggtcccacgtaatacaatatattacttcacacttcccaattatttaaaccactaaacta 6859064  T
Q  119 catttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
     |||||  ||||||||||||||||  || |||||| |||||| |||| ||||    
T  6859065 tattttctaaatatccatgccacttttcaaaaactttaaaataggtctcact 6859116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 32914592 - 32914430
Alignment:
Q  10 agacagtaagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaacc 109  Q
    ||||| |||||||| |||||| |||  || ||||||| || || |||||||  ||||  |||||| |||||||||||||||||| |||||||||||||||    
T  32914592 agacactaagagcacccacatccatgtcatccatatgagtagtataaatgggtcccatataatattttatattacttcacacttttcaattatttaaacc 32914493  T
Q  110 actcaactacatttttc-aaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    ||||||||||||||||| |||||||||| |||||| || ||||||||||||| |||||||||||    
T  32914492 actcaactacatttttctaaatatccataccactc-tcaaaaactctaaaataggtcccactaa 32914430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 37070029 - 37069875
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||  ||||| ||||||| ||||||| || ||||||| ||||||||||||||||||      
T  37070029 taagagcatccacatccatgccacccatttgggtggtataaatgggtcccacataatataatatattattttacacttcccaattatttaaaccactctc 37069930  T
Q  116 ctaca-tttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
     |||| ||||| |||||||||| | ||||||| |||| | |||| ||||||||||    
T  37069929 ttacatttttttaaatatccatactactcatctaaaattttaaagtgggtcccac 37069875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 9104566 - 9104689
Alignment:
Q  41 catatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgcca 140  Q
    |||||||||||| |||||||  | ||  |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| || |||    
T  9104566 catatgggtggtataaatgggtctcatctaatattttatattatttcacaattctcaattatttaaaccactcaactacattttttaaatatctatacca 9104665  T
Q  141 ctcatccaaaactctaaaatgggt 164  Q
    ||| || |||| | ||||||||||    
T  9104666 ctcttctaaaattttaaaatgggt 9104689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 3739613 - 3739456
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaa 115  Q
    ||||||||||||||| ||| |||||||||||| |||| |||||||| |||| | |||| |||||||||  ||||||||    ||||||||||||||| ||    
T  3739613 taagagcatccacatccataccacccatatggatggtataaatggatcccattgaatacattatattatctcacactttcttattatttaaaccacttaa 3739514  T
Q  116 ctacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaat 174  Q
    |||||||||  ||||||||||   |||| ||||||| | |||||||| |||||| ||||    
T  3739513 ctacattttctaaatatccataatactc-tccaaaattttaaaatggatcccacaaaat 3739456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 14657612 - 14657492
Alignment:
Q  42 atatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccac 141  Q
    ||||||||||| ||||||| | | || ||||| ||||||||| |||||||||  |||||||||||||||||||||||||||||  |||||| |||  |||    
T  14657612 atatgggtggtataaatggtcac-acataatacattatattatttcacactttccaattatttaaaccactcaactacattttctaaatattcatatcac 14657514  T
Q  142 tcatccaaaactctaaaatggg 163  Q
    |  |||||||||||||||||||    
T  14657513 tgctccaaaactctaaaatggg 14657492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 33386646 - 33386793
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||||| ||| ||||| |||||||  ||||| ||||||||||     ||| ||| ||| |||||||||||||||||||| |    
T  33386646 agagcaaccacatccatgccacccaaatgagtggtataaatgggacccacataatatatta-----ctttacaattcccaattatttaaaccactcaatt 33386740  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
     ||||||  |||||| ||| |||||| || |||||||||||||||||||||||    
T  33386741 gcattttctaaatattcataccactcctctaaaactctaaaatgggtcccact 33386793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 38610040 - 38609893
Alignment:
Q  21 gcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactaca 120  Q
    |||||||||| ||| ||||| |||| | |||| |||||||| | |||| |||||||||||||| || ||||||    |||||||||||||||||| || |    
T  38610040 gcatccacatccataccacctatattgatggtataaatggatctcactgaatatattatattattttacactttcttattatttaaaccactcaattata 38609941  T
Q  121 tttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||||  |||||||||| | |||| ||||||||| |||||||||||||||    
T  38609940 ttttctaaatatccatactactc-tccaaaactttaaaatgggtcccac 38609893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 7395020 - 7394951
Alignment:
Q  107 accactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
    ||||||||  |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  7395020 accactcatttacatttttcaaatatccatacaactcatccaaaactctaaaatgggtcccacaaaattc 7394951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 18565872 - 18565739
Alignment:
Q  11 gacagtaagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaacca 110  Q
    |||| ||||| |||||| ||||||  || ||||||| ||||| |||||||  | ||  ||||| ||||||||||||   ||||||||||||||||||  |    
T  18565872 gacactaagaacatccatattcatgtcatccatatgagtggtataaatgggtctcatataatacattatattactttcgacttctcaattatttaaatga 18565773  T
Q  111 ctcaactacatttttcaaatatccatgccactca 144  Q
    ||||||||||||||| |||||||||| |||||||    
T  18565772 ctcaactacattttttaaatatccataccactca 18565739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 39375782 - 39375681
Alignment:
Q  69 taatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccca 168  Q
    |||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||| |||||||||| ||| || ||||||| | |||||  |||||||    
T  39375782 taatatattatattacttcatattttccaattatttaaaccactcaactatattttttaaatatccataccattcctccaaaattttaaaacaggtccca 39375683  T
Q  169 ct 170  Q
    ||    
T  39375682 ct 39375681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 7395550 - 7395456
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccact 112  Q
    |||||| ||| || ||| |||| ||||||||| || |||||||  ||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  7395550 agagcacccatatccatgccactcatatgggtagtataaatgggtcccacctaatattttatattacttcacacttttcaattatttaaaccact 7395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 4897342 - 4897246
Alignment:
Q  42 atatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgc 138  Q
    |||| |||||| |||||||| | ||  |||||||||| ||||||||||| || |||||||||||||| |||||||||||||||  |||||| |||||    
T  4897342 atataggtggtataaatggatcacatataatatattacattacttcacatttttcaattatttaaactactcaactacattttctaaatattcatgc 4897246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 4944736 - 4944640
Alignment:
Q  42 atatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgc 138  Q
    |||| |||||| |||||||| | ||  |||||||||| ||||||||||| || |||||||||||||| |||||||||||||||  |||||| |||||    
T  4944736 atataggtggtataaatggatcacatataatatattacattacttcacatttttcaattatttaaactactcaactacattttctaaatattcatgc 4944640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 5147101 - 5147232
Alignment:
Q  43 tatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccact 142  Q
    |||||||||| | |||||   ||||| ||||||||||||||  ||||||||| | |||||||||| || |||||||||||||  |||||| ||| | |||    
T  5147101 tatgggtggtatgaatgggttccactgaatatattatattatctcacacttccctattatttaaatcattcaactacattttctaaatattcatactact 5147200  T
Q  143 catccaaaactctaaaatgggtcccactaaatt 175  Q
    | ||||||||| ||||| ||||||||| |||||    
T  5147201 c-tccaaaactttaaaacgggtcccacaaaatt 5147232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 29984906 - 29985010
Alignment:
Q  68 ttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtccc 167  Q
    ||||| |||||||||| || | |||||| |||||||||||| ||||||||| ||||||   ||||||||  |||||||||| |||||||||||  |||||    
T  29984906 ttaatttattatattattttatacttcttaattatttaaacaactcaactaaattttttgtatatccatatcactcatccataactctaaaatatgtccc 29985005  T
Q  168 actaa 172  Q
    |||||    
T  29985006 actaa 29985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 29794468 - 29794379
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaa 107  Q
    |||||||||| || ||| |||| ||| | |||||| ||||||||| |||| ||||||||||||||| ||||||||| || ||||||||||    
T  29794468 agagcatccatatccataccacacattttggtggtataaatggactccacctaatatattatattatttcacacttttcgattatttaaa 29794379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 43490616 - 43490502
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatat-tatattacttcacacttctcaattatttaaaccactcaac 116  Q
    ||||||||||||||||| |||| || || | |||| |||||| ||||||| ||||||||  |||||| |||||| || | ||||||||||| || ||||     
T  43490616 agagcatccacattcataccacgcacattgatggtataaatgaaccccacataatatataaatattatttcacattttttaattatttaaatcattcaaa 43490517  T
Q  117 tacatttttcaaata 131  Q
    ||||||||| |||||    
T  43490516 tacattttttaaata 43490502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 3384731 - 3384808
Alignment:
Q  97 aattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaat 174  Q
    |||||||||||| | |||||||||||||  |||||| |||  |||||||| |||| | ||||||||||||||||||||    
T  3384731 aattatttaaacaattcaactacattttataaatattcatatcactcatcaaaaaatttaaaatgggtcccactaaat 3384808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 13250507 - 13250566
Alignment:
Q  114 aactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaa 173  Q
    |||||||||||  |||||| ||| ||||||||| |||||||||||||| |||||| ||||    
T  13250507 aactacattttataaatattcataccactcatctaaaactctaaaatgagtcccattaaa 13250566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 37258125 - 37258201
Alignment:
Q  16 taagagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacact 92  Q
    ||||||||||||||| |||  ||| ||||||| |||| |||||||  | ||  ||||||||||||||| ||||||||    
T  37258125 taagagcatccacatccatgtcactcatatggatggtataaatgggtctcatataatatattatattatttcacact 37258201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 40279089 - 40278938
Alignment:
Q  19 gagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaacta 118  Q
    ||||| |||||||||| ||||||| ||| ||||| |||||||  ||||| |||||||||||||||||| | ||||  |||||||||||||||||||||||    
T  40279089 gagcacccacattcatgccacccaaatgagtggtataaatgggacccacataatatattatattactttatactttccaattatttaaaccactcaacta 40278990  T
Q  119 catttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    ||||||  |||||||||| ||||||  | |||||||||||||||||||||||    
T  40278989 cattttctaaatatccataccactccactaaaactctaaaatgggtcccact 40278938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 18227125 - 18226971
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| |||||||| |||||||| |||| ||  ||||| ||||| |||||||||| ||||||||| |||||||||||||||  |||||    
T  18227125 agagcatccacatccatgccacccatttgggtggtataaacgggtcccacataatacattatattacctcacacttcccaattatttaaaccatccaact 18227026  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||| |||||||||| |||| |||   |||||||||||||| |||||||||    
T  18227025 acattttttaaatatccataccacccattataaactctaaaatggatcccactaa 18226971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 35158845 - 35158999
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| |||  ||| |||||||||||| ||||||   |  ||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  35158845 agagcatccacatccatatcactcatatgggtggtataaatgagtctgacttaatatattatattactggacacttcccaattatttaaaccactcaact 35158944  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||  |||||| ||| ||| |  ||  |||||||||||| |||||||||||    
T  35158945 acattttctaaatattcataccatttttcgtaaactctaaaataggtcccactaa 35158999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 5191411 - 5191314
Alignment:
Q  79 tattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaaattc 176  Q
    ||||||||||||||| ||||||| |||||| |||||| |||||||||||||||| |||  ||||||||||||| |||||||||| |||||||||||||    
T  5191411 tattacttcacacttttcaattacttaaactactcaattacatttttcaaatattcatatcactcatccaaaattctaaaatggatcccactaaattc 5191314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 1156398 - 1156246
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| ||||||||||| ||||| |||||||  | ||| ||||| | ||||||| |||||||||| ||||||||||||||||| ||||    
T  1156398 agagcatccacatccataccacccatatgagtggtataaatgggtctcacgtaatacaatatattatttcacacttcccaattatttaaaccactaaact 1156299  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccact 170  Q
    | || ||  |||||||||| |||||| ||||||| | |||||| |||| ||||    
T  1156298 atatcttctaaatatccataccactcttccaaaattttaaaataggtctcact 1156246  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 11425461 - 11425606
Alignment:
Q  20 agcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactac 119  Q
    |||| |||||| ||| ||||||| |||| |||| |||||||   |||| |||||||||||||||||| ||||||| ||||||||||| | ||||||||||    
T  11425461 agcaaccacatccatgccacccaaatggatggtataaatgggatccacataatatattatattactttacacttcccaattatttaaccgactcaactac 11425560  T
Q  120 atttttcaaatatccatgccactcatccaaaactctaaaatgggtcc 166  Q
    |||||  |||||| |||  ||||| || |||||||||||||||||||    
T  11425561 attttctaaatattcat-acactcctctaaaactctaaaatgggtcc 11425606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 37479317 - 37479177
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    |||||| |||||| ||| ||||  |||||| |||| |||||| | || || |||||||||||||||||| | |||| |||||||||||||||||||||||    
T  37479317 agagcaaccacatccatgccacttatatggatggtataaatgaatcc-acataatatattatattactttaaacttttcaattatttaaaccactcaact 37479219  T
Q  118 acat-ttttcaaatatccatgccactcatccaaaactctaaa 158  Q
    |||| |||| |||||||||| | ||||||| |||||||||||    
T  37479218 acatttttttaaatatccatactactcatctaaaactctaaa 37479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 9682427 - 9682332
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||| ||| || | ||||||| || |||||||||||||||    
T  9682427 ttatattacttcacacttttcaattatttaaaccactcaactacattttctaaacatccataccattcttacaaaact-tataatgggtcccactaa 9682332  T

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Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 17312919 - 17312824
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||| ||| || | ||||| | || |||||||||||||||    
T  17312919 ttatattacttcacacttttcaattatttaaaccactcaactacatcttctaaatatccataccattcttacaaaa-tttataatgggtcccactaa 17312824  T

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Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 27594334 - 27594239
Alignment:
Q  76 ttatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatccaaaactctaaaatgggtcccactaa 172  Q
    |||||||| ||||||| |  |||||||||||||||||||||||||||||  |||||| ||| |||||| | ||||||| || ||||| |||||||||    
T  27594334 ttatattatttcacaccttccaattatttaaaccactcaactacattttctaaatattcataccactcttacaaaact-tacaatggatcccactaa 27594239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 45251430 - 45251579
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| |  |||||||| ||||| |||  ||  |||| | | || ||||| ||| |||||| || || ||||||||||||||| || |    
T  45251430 agagcatccacatccatgctgcccatatgagtggtataagcgggtcccattgactaaattatgttatttcacatttttctattatttaaaccacttaaat 45251529  T
Q  118 acatttttcaaatatccatgccactcatccaaaactctaaaatgggtccca 168  Q
    |||||||| |||||||||| | |||| || ||||||||||||| |||||||    
T  45251530 acattttttaaatatccatactactc-tctaaaactctaaaatcggtccca 45251579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 30234946 - 30235067
Alignment:
Q  49 tggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaactacatttttcaaatatccatgccactcatcca 148  Q
    ||||||||||| |  ||||||||||  |||||||| || ||| ||| ||| ||||||||| ||||||||  |||||| ||||||  || | || |||| |    
T  30234946 tggtttaaatgaattccacttaatactttatattattttacatttcccaaatatttaaacaactcaactgtattttttaaatatttatacaacccatcaa 30235045  T
Q  149 aaactctaaaatgggtcccact 170  Q
    |||||||||||| |||||||||    
T  30235046 aaactctaaaataggtcccact 30235067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 34954345 - 34954380
Alignment:
Q  97 aattatttaaaccactcaactacatttttcaaatat 132  Q
    ||||||||||||||||||||||||||||| ||||||    
T  34954345 aattatttaaaccactcaactacattttttaaatat 34954380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 13773 - 13925
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| |||||||| |||||||| |||||||  ||||| ||||||| ||||||| || ||||||| ||||||||||||||||||   |    
T  13773 agagcatccacatccatgccacccatttgggtggtataaatgggtcccacataatataatatattattttacacttcccaattatttaaaccactctctt 13872  T
Q  118 aca-tttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||| ||||| |||||||||| | ||||||| |||||| |||| ||||||||||    
T  13873 acatttttttaaatatccatactactcatctaaaactttaaagtgggtcccac 13925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 21510 - 21662
Alignment:
Q  18 agagcatccacattcattccacccatatgggtggtttaaatggaccccacttaatatattatattacttcacacttctcaattatttaaaccactcaact 117  Q
    ||||||||||||| ||| |||||||| |||||||| |||||||  ||||| ||||||| ||||||| || ||||||| ||||||||||||||||||   |    
T  21510 agagcatccacatccatgccacccatttgggtggtataaatgggtcccacataatataatatattattttacacttcccaattatttaaaccactctctt 21609  T
Q  118 aca-tttttcaaatatccatgccactcatccaaaactctaaaatgggtcccac 169  Q
    ||| ||||| |||||||||| | ||||||| |||||| |||| ||||||||||    
T  21610 acatttttttaaatatccatactactcatctaaaactttaaagtgggtcccac 21662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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