View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20758_high_50 (Length: 231)
Name: NF20758_high_50
Description: NF20758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20758_high_50 |
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Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 19109138 - 19108936
Alignment:
| Q |
16 |
aaaatctctaatgcacatggcagtttagtacaactgtgatcttcagagaaacttgtttccatattgcttgaggaagcccctcaaaggaggactaaatttg |
115 |
Q |
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| T |
19109138 |
aaaatctctaatgcacatggcagtttagtacaactgtgatcttcagagaaacttgtttccatattgctcgaggaagcccctcaaaggaggactaaatttg |
19109039 |
T |
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| Q |
116 |
aacctgctgcatattggtctgcactgatgaatgatctccaataagagtggctttacaccactctaccaaatatgattaagcttcaaagctctttgttgaa |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |
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| T |
19109038 |
aacctgctgcatattggtctgcactgatgaatgatctccaataagagtggcttgacaacactctaccaaatatgattgagcttcaaagctctttgttgaa |
19108939 |
T |
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| Q |
216 |
tct |
218 |
Q |
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||| |
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| T |
19108938 |
tct |
19108936 |
T |
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