View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20758_low_35 (Length: 276)
Name: NF20758_low_35
Description: NF20758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20758_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 35970326 - 35970586
Alignment:
| Q |
18 |
agacacgacactccacattttttattgcgtctgtgggataaatagttcaga-----------atcatatgcaataatagagtttggaaattgaagagaaa |
106 |
Q |
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| T |
35970326 |
agacacgacactccacattttt-attgcgtctgtgggataaataattcagaatgcagacagaatcatatgcaataatagagtttggaaattgaagagaaa |
35970424 |
T |
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| Q |
107 |
ttattggcaaatggctcattttaaaccacatgcatgtttatctttagtctagacattaccaatccaacttcttcaacttgcttggtatggtatgtaatta |
206 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35970425 |
ttattggcaaatggctcattttaaaccacatgcatgcttatctttagtctagacattaccaatccaacttcttcaacttgcttggtatggtatgtaatta |
35970524 |
T |
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| Q |
207 |
tgtatgcatatattaggatatatctagataaaaaattgtgtatatggtgtttaccctatgct |
268 |
Q |
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| T |
35970525 |
tgtatgcatatatgaggatatatctagataaaaaattgtgtatatggtgtttaccctatgct |
35970586 |
T |
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