View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20759_low_30 (Length: 227)

Name: NF20759_low_30
Description: NF20759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20759_low_30
NF20759_low_30
[»] chr5 (14 HSPs)
chr5 (1-214)||(10217592-10217802)
chr5 (6-214)||(10747858-10748066)
chr5 (1-214)||(10610863-10611076)
chr5 (47-214)||(10603951-10604118)
chr5 (4-214)||(10741542-10741752)
chr5 (150-214)||(11049500-11049564)
chr5 (48-214)||(10763976-10764142)
chr5 (78-189)||(9837196-9837307)
chr5 (47-214)||(10601054-10601221)
chr5 (143-214)||(10717783-10717854)
chr5 (79-193)||(10558151-10558265)
chr5 (47-213)||(7192204-7192370)
chr5 (1-91)||(10717864-10717954)
chr5 (143-214)||(10564322-10564393)
[»] chr6 (5 HSPs)
chr6 (2-214)||(12931433-12931645)
chr6 (6-214)||(12947802-12948010)
chr6 (2-214)||(12898724-12898936)
chr6 (2-214)||(12906344-12906556)
chr6 (33-214)||(12957263-12957444)
[»] chr2 (1 HSPs)
chr2 (2-214)||(17924246-17924458)
[»] chr3 (1 HSPs)
chr3 (67-199)||(31468020-31468152)


Alignment Details
Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 10217802 - 10217592
Alignment:
Q  1 taatcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagcta 100  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10217802 taatcttttttccttatcaattttattggagttgtcacataattttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagcta 10217703  T
Q  101 gatgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaa 200  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10217702 gatgtttctgaaaataatctgtttggtgatattcctatc---attggtgaatgcgtaagcttggaataccttcatttgcaagggaactccttcaatggaa 10217606  T
Q  201 caataccgtcctct 214  Q
    ||||||| ||||||    
T  10217605 caataccatcctct 10217592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 214
Target Start/End: Complemental strand, 10748066 - 10747858
Alignment:
Q  6 ttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctagatgt 105  Q
    ||||||| |||||||  |||||| | || ||||| ||||||||||| |||||||| ||||||||||| ||  | ||||||||||||| |  |||||||||    
T  10748066 ttttttctttatcaaacttattgaacttatcacataactttttgagtggtagcttaccaagagaagtgggtttactaaaaaatattgattggctagatgt 10747967  T
Q  106 ttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaata 205  Q
     ||||| ||| |||| | ||||||||||||||  || |||||||| |||  |  ||| |||||||||| | |||||||||||||||||||||||||||||    
T  10747966 ctctgagaatcatctatctggtgatattcctacaacaattggtgattgcacagccttagaataccttcacctgcaagggaactccttcaatggaacaata 10747867  T
Q  206 ccgtcctct 214  Q
    || ||||||    
T  10747866 ccatcctct 10747858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 10610863 - 10611076
Alignment:
Q  1 taatcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagcta 100  Q
    |||||||||||  ||||||| ||||||| | ||||| || |||| |||||| |||||||| ||||||||||| || |||||||||||||||  || ||||    
T  10610863 taatcttttttatttatcaaatttattgaacttgtcgcataactctttgagtggtagcttaccaagagaagtgggtatgctaaaaaatattaatatgcta 10610962  T
Q  101 gatgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaa 200  Q
    ||||| ||||| ||| | || | |  | || ||||||  ||  ||||||||||  |||| || ||||||||||| |||||||| ||||||||||||||||    
T  10610963 gatgtatctgagaatcaactatcttcttatcttcctagaacagttggtgaatgtataagtttagaataccttcttttgcaaggtaactccttcaatggaa 10611062  T
Q  201 caataccgtcctct 214  Q
    ||||||| ||||||    
T  10611063 caataccttcctct 10611076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 10603951 - 10604118
Alignment:
Q  47 ttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatattcctatcactattg 146  Q
    ||||| |||||||| |||| |||||| || |||||||||||||||| |  | ||||||| ||||||||| || ||| ||| || ||||||   |||||||    
T  10603951 ttgagtggtagcttaccaaaagaagtgggtatgctaaaaaatattgattggttagatgtctctgaaaatcatttgtgtggggagattcctggaactattg 10604050  T
Q  147 gtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 214  Q
    |||||||| ||||||| ||||||||||  |||||||||||||| ||||| ||||||||||| ||||||    
T  10604051 gtgaatgcataagcttagaataccttcgtttgcaagggaactcattcaacggaacaataccatcctct 10604118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 10741752 - 10741542
Alignment:
Q  4 tcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctagat 103  Q
    ||||| ||| |||||||  |||||||| |||||||| |||  |||||| |||||| | ||||||||||| || ||| ||||||||||||  | |||||||    
T  10741752 tctttcttctttatcaaacttattggacttgtcacataacactttgagtggtagcataccaagagaagtgggtatgttaaaaaatattgacatgctagat 10741653  T
Q  104 gtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaa 203  Q
     | ||||| |||  ||| | ||||||||||||||  || ||||||||||||  || ||| ||||||||||  |||||||||||||||||||  |||||||    
T  10741652 ctatctgagaatcgtctatctggtgatattcctagaacaattggtgaatgcacaaccttagaataccttcaattgcaagggaactccttcagcggaacaa 10741553  T
Q  204 taccgtcctct 214  Q
    |||| ||||||    
T  10741552 taccatcctct 10741542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 11049564 - 11049500
Alignment:
Q  150 aatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11049564 aatgcgtaagcttcgaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 11049500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 10764142 - 10763976
Alignment:
Q  48 tgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatattcctatcactattgg 147  Q
    |||| |||||||| ||||||||||| || ||| ||||||||||||  | ||| ||| | ||||| ||| |||| | ||||||||||||||  || |||||    
T  10764142 tgagtggtagcttaccaagagaagtgggtatgttaaaaaatattgacatgctggatctatctgagaatcatctatctggtgatattcctaaaacaattgg 10764043  T
Q  148 tgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 214  Q
    |||||||  || ||| ||||||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  10764042 tgaatgcacaaccttagaataccttcaattgcaagggaactccttcagcggaacaataccatcctct 10763976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 9837307 - 9837196
Alignment:
Q  78 tgctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctctt 177  Q
    ||||||||||||||  |||||||||||| ||||||||| ||||||  ||||| ||||| || || |||||||||||| |||| || |||||||||| |||    
T  9837307 tgctaaaaaatattcataagctagatgtctctgaaaatcatctgtcgggtgacattccaataacaattggtgaatgcataagtttagaataccttcactt 9837208  T
Q  178 gcaagggaactc 189  Q
     || ||||||||    
T  9837207 acaggggaactc 9837196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 10601054 - 10601221
Alignment:
Q  47 ttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatattcctatcactattg 146  Q
    ||||| ||||||||  ||| |||||| || |||||||||||||||| |  ||||||||| ||||| ||| || ||| ||| || ||| ||   || ||||    
T  10601054 ttgagaggtagcttaacaaaagaagtgggtatgctaaaaaatattgattggctagatgtctctgagaatcatttgtgtggggagattactggaaccattg 10601153  T
Q  147 gtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 214  Q
    ||||||  |||||||| ||||||||||  ||||||| ||| || ||||| ||||||||||| ||||||    
T  10601154 gtgaatatgtaagcttagaataccttcatttgcaagagaattctttcaacggaacaataccatcctct 10601221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 10717854 - 10717783
Alignment:
Q  143 attggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 214  Q
    |||||||||||| | ||||||||||| ||||  ||| ||||||||||| |||||||||||||||| ||||||    
T  10717854 attggtgaatgcatgagcttggaatatcttcatttggaagggaactccatcaatggaacaataccatcctct 10717783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 10558151 - 10558265
Alignment:
Q  79 gctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttg 178  Q
    |||||||||||||  |||||||||| | ||||| |||||| ||| |||||| |||||||| || |||| | |||||  |||||| ||||||||| | |||    
T  10558151 gctaaaaaatattaataagctagatttctctgagaataatttgtctggtgaaattcctataaccattgatcaatgcaaaagcttagaatacctttttttg 10558250  T
Q  179 caagggaactccttc 193  Q
    ||||| || ||||||    
T  10558251 caaggaaattccttc 10558265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 213
Target Start/End: Original strand, 7192204 - 7192370
Alignment:
Q  47 ttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatattcctatcactattg 146  Q
    ||||| |||||| | ||||||||||| || |||||||||| |||    ||||||||||| || || |||  ||| | |||||| |||||||   | ||||    
T  7192204 ttgagtggtagcctaccaagagaagtgggtatgctaaaaagtatcaacaagctagatgtctcggagaatcttctatctggtgacattcctagagccattg 7192303  T
Q  147 gtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctc 213  Q
    | |||||| || |||| ||||||||  | |||||||| ||||||||||| ||||| ||||| |||||    
T  7192304 gcgaatgcatacgcttagaatacctctttttgcaaggaaactccttcaacggaaccataccatcctc 7192370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10717954 - 10717864
Alignment:
Q  1 taatcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatatt 91  Q
    |||||||||||  |||||||   ||||||| |||||||| |||| |||||| |||||||| |||||||||||  | ||| |||||||||||    
T  10717954 taatcttttttatttatcaaaaatattggacttgtcacataactctttgagtggtagcttaccaagagaagtgagtatgttaaaaaatatt 10717864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 10564322 - 10564393
Alignment:
Q  143 attggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 214  Q
    ||||| |||||  ||||||| ||||| ||| | |||||||||||| |||||||  |||||||||||||||||    
T  10564322 attggcgaatgtataagcttagaatatcttatgttgcaagggaacgccttcaacagaacaataccgtcctct 10564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 12931433 - 12931645
Alignment:
Q  2 aatcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagc--t 99  Q
    ||||||||||| |||||||| |||||| | |||||||| |||| ||| || |||||||| ||||||||||| || ||| ||||||||||||  ||||  |    
T  12931433 aatcttttttctttatcaatcttattgaacttgtcacataactctttaagtggtagcttaccaagagaagtgggtatgttaaaaaatattg--aagcatt 12931530  T
Q  100 agatgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatgga 199  Q
    |||||| ||||| ||| |||| | ||||||||||||||     |||||||||||   |||||| |||||  |||  |||||| ||||||||||||| |||    
T  12931531 agatgtctctgagaatcatctatctggtgatattcctagagaaattggtgaatgtacaagcttagaatatattcatttgcaaaggaactccttcaacgga 12931630  T
Q  200 acaataccgtcctct 214  Q
    |||||||||||||||    
T  12931631 acaataccgtcctct 12931645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 214
Target Start/End: Original strand, 12947802 - 12948010
Alignment:
Q  6 ttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagc--tagat 103  Q
    ||||||| |||||||   ||||| | |||||||| |||| |||||| |||||||| ||||||||||| || ||| ||||||||||||  ||||  |||||    
T  12947802 ttttttctttatcaaagatattgaacttgtcacataactctttgagtggtagcttaccaagagaagtgggtatgttaaaaaatattg--aagcattagat 12947899  T
Q  104 gtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaa 203  Q
    || ||||| ||| |||| | ||||||||||||||     |||||||||||   |||||| |||||  |||  |||||| ||||||||||||| |||||||    
T  12947900 gtctctgagaatcatctatctggtgatattcctagagaaattggtgaatgtacaagcttagaatatattcatttgcaaaggaactccttcaacggaacaa 12947999  T
Q  204 taccgtcctct 214  Q
    |||||||||||    
T  12948000 taccgtcctct 12948010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 12898724 - 12898936
Alignment:
Q  2 aatcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctag 101  Q
    ||||||||||| |||||||| |||||| | |||||||| |||| |||||||||||  || ||||||||||| || ||| |||||||||||       |||    
T  12898724 aatcttttttctttatcaatgttattgaacttgtcacataactctttgagcggtactttaccaagagaagtgggtatgttaaaaaatattaaaggattag 12898823  T
Q  102 atgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaac 201  Q
    |||| ||||  ||| |||| | |||||||||||| ||    |||||||||||   |||| | |||||  |||| |||||| ||||||||||||| |||||    
T  12898824 atgtctctgggaatcatctatctggtgatattccgatagaaattggtgaatgtacaagcatagaatatattcttttgcaaaggaactccttcaacggaac 12898923  T
Q  202 aataccgtcctct 214  Q
    |||||||||||||    
T  12898924 aataccgtcctct 12898936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 12906344 - 12906556
Alignment:
Q  2 aatcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctag 101  Q
    ||||| ||||| |||||||| |||||| | |||||||| |||| |||||||||||  || ||||||||||| || ||| ||||||||||||   |  |||    
T  12906344 aatctgttttctttatcaatcttattgaacttgtcacataactctttgagcggtactttaccaagagaagtgggtatgttaaaaaatattgcagaattag 12906443  T
Q  102 atgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaac 201  Q
    |||| ||||| ||| |||| | |||||||||||| |     |||||||||||   |||||| |||||  |||  |||||| |||||||||| || |||||    
T  12906444 atgtctctgagaatcatctatctggtgatattccgagagaaattggtgaatgtacaagcttagaatatattcatttgcaaaggaactcctttaacggaac 12906543  T
Q  202 aataccgtcctct 214  Q
    |||||||||||||    
T  12906544 aataccgtcctct 12906556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 214
Target Start/End: Original strand, 12957263 - 12957444
Alignment:
Q  33 tgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatat 132  Q
    ||||||| |||| ||||||||||| ||| |||| |||||| || ||| ||||||||||||   |  ||||||| ||||| ||| |||| | |||||||||    
T  12957263 tgtcacataactctttgagcggtaccttaccaacagaagtgggtatgttaaaaaatattgaagatttagatgtctctgagaatcatctatctggtgatat 12957362  T
Q  133 tcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaacaataccgtcctct 214  Q
    ||| |     |||||||||||   || ||| |||||  |||  |||||| |||||  |||||||||||||||||||||||||    
T  12957363 tccgagagaaattggtgaatgtacaatcttagaatatattcgtttgcaaaggaacatcttcaatggaacaataccgtcctct 12957444  T

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Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 17924458 - 17924246
Alignment:
Q  2 aatcttttttccttatcaattttattggagttgtcacagaactttttgagcggtagcttgccaagagaagttggcatgctaaaaaatattggtaagctag 101  Q
    ||||||||||| |||||||| |||||| | |||||||| |||| |||||| |||| ||| |||||||||||  | ||| ||||||||||||   |  |||    
T  17924458 aatcttttttctttatcaatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgagtatgttaaaaaatattgaagaattag 17924359  T
Q  102 atgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaataccttctcttgcaagggaactccttcaatggaac 201  Q
    |||| ||||| ||| |||| | |||||||||||| |     |||||||||||  ||||||| |||||  |||  |||||| ||||||||||||| |||||    
T  17924358 atgtctctgagaatcatctatctggtgatattccgagagaaattggtgaatgtataagcttagaatatattcatttgcaaaggaactccttcaacggaac 17924259  T
Q  202 aataccgtcctct 214  Q
    |||||||||||||    
T  17924258 aataccgtcctct 17924246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 31468152 - 31468020
Alignment:
Q  67 agaagttggcatgctaaaaaatattggtaagctagatgtttctgaaaataatctgtttggtgatattcctatcactattggtgaatgcgtaagcttggaa 166  Q
    |||||| |||| |||| ||||||| || ||| |  || ||||||| |||||||| | ||||||||||||||  || ||||| |||||||||||||||||     
T  31468152 agaagtaggcaggctagaaaatatcggaaagttgaatttttctgagaataatctatctggtgatattcctagaacgattggggaatgcgtaagcttggag 31468053  T
Q  167 taccttctcttgcaagggaactccttcaatgga 199  Q
    ||||||   |||||||| || |||||| |||||    
T  31468052 tacctttatttgcaaggaaattccttccatgga 31468020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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