View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20759_low_4 (Length: 582)

Name: NF20759_low_4
Description: NF20759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20759_low_4
NF20759_low_4
[»] chr7 (6 HSPs)
chr7 (14-564)||(12357990-12358540)
chr7 (260-443)||(19139316-19139502)
chr7 (260-443)||(20738715-20738901)
chr7 (260-305)||(5636919-5636964)
chr7 (460-560)||(22334848-22334948)
chr7 (461-533)||(24596560-24596632)
[»] chr3 (8 HSPs)
chr3 (98-445)||(23907487-23907836)
chr3 (260-410)||(21828560-21828711)
chr3 (32-118)||(33578658-33578744)
chr3 (261-437)||(14280652-14280828)
chr3 (390-437)||(22488360-22488407)
chr3 (461-534)||(19218757-19218830)
chr3 (326-414)||(33578359-33578448)
chr3 (85-121)||(21654579-21654615)
[»] scaffold1587 (1 HSPs)
scaffold1587 (148-351)||(1137-1341)
[»] chr4 (16 HSPs)
chr4 (16-446)||(17331761-17332196)
chr4 (260-438)||(10577033-10577214)
chr4 (65-294)||(25366939-25367168)
chr4 (260-430)||(32022340-32022512)
chr4 (65-120)||(24912481-24912535)
chr4 (260-305)||(39134147-39134192)
chr4 (241-305)||(34667404-34667468)
chr4 (116-173)||(32022560-32022617)
chr4 (260-304)||(4733413-4733457)
chr4 (69-121)||(13273659-13273711)
chr4 (261-305)||(33519741-33519785)
chr4 (390-437)||(5676767-5676814)
chr4 (336-414)||(7023664-7023743)
chr4 (259-305)||(26160453-26160499)
chr4 (260-301)||(31859254-31859295)
chr4 (444-560)||(21077722-21077838)
[»] chr2 (7 HSPs)
chr2 (277-560)||(15453880-15454163)
chr2 (260-535)||(17883925-17884202)
chr2 (463-504)||(24188515-24188556)
chr2 (390-509)||(18819182-18819302)
chr2 (324-441)||(25474576-25474692)
chr2 (29-102)||(15453648-15453721)
chr2 (88-120)||(14962924-14962956)
[»] chr5 (13 HSPs)
chr5 (324-504)||(11997310-11997491)
chr5 (71-167)||(19443621-19443717)
chr5 (394-430)||(20715163-20715199)
chr5 (260-316)||(30791309-30791365)
chr5 (324-430)||(24131211-24131318)
chr5 (260-316)||(30803280-30803335)
chr5 (421-535)||(19763414-19763529)
chr5 (394-437)||(25594149-25594192)
chr5 (324-429)||(20084080-20084185)
chr5 (381-430)||(16622121-16622170)
chr5 (261-305)||(7742244-7742288)
chr5 (394-430)||(18451729-18451765)
chr5 (289-364)||(26328383-26328459)
[»] chr8 (7 HSPs)
chr8 (260-316)||(23876639-23876695)
chr8 (259-485)||(12774222-12774451)
chr8 (260-414)||(6887565-6887721)
chr8 (390-437)||(24927347-24927394)
chr8 (260-438)||(28259902-28260080)
chr8 (260-305)||(5154482-5154527)
chr8 (396-509)||(27085069-27085181)
[»] chr6 (7 HSPs)
chr6 (260-437)||(26499215-26499393)
chr6 (261-438)||(9395954-9396135)
chr6 (260-305)||(10976426-10976471)
chr6 (260-430)||(16174711-16174884)
chr6 (260-305)||(32929827-32929872)
chr6 (391-427)||(17859973-17860009)
chr6 (264-348)||(13123584-13123671)
[»] chr1 (10 HSPs)
chr1 (260-430)||(31314128-31314300)
chr1 (324-535)||(15416464-15416675)
chr1 (289-430)||(12810742-12810883)
chr1 (390-430)||(14744937-14744977)
chr1 (85-121)||(15416234-15416270)
chr1 (390-437)||(21549225-21549272)
chr1 (86-121)||(25964544-25964579)
chr1 (240-372)||(13807158-13807292)
chr1 (88-121)||(18396338-18396371)
chr1 (260-305)||(23421018-23421063)
[»] scaffold0386 (1 HSPs)
scaffold0386 (459-504)||(11322-11367)
[»] scaffold0100 (1 HSPs)
scaffold0100 (327-435)||(37563-37671)
[»] scaffold0650 (1 HSPs)
scaffold0650 (394-430)||(5231-5267)
[»] scaffold0190 (1 HSPs)
scaffold0190 (261-317)||(11027-11083)


Alignment Details
Target: chr7 (Bit Score: 519; Significance: 0; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 519; E-Value: 0
Query Start/End: Original strand, 14 - 564
Target Start/End: Original strand, 12357990 - 12358540
Alignment:
Q  14 gaacatgaccccataatgtaacgatgggaagtttgtgtatttttgctgcaccaaaggctatacttgggacgtttccctaaagatgaatcataaccctaac 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357990 gaacatgaccccatgatgtaacgatgggaagtttgtgtatttttgctgcaccaaaggctatacttgggacgtttccctaaagatgaatcataaccctaac 12358089  T
Q  114 aatcatacatgtatttaaattaaaagagattacattaaaatgaggaatttactactgttcttttttggacaccgtcatgatagtcaatcctataccttag 213  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12358090 aatcatacatgtatttaaattaaaagagattactttaaaatgaggaatttactactgttcttttttggacaccggcatgatagtcaatcctataccttag 12358189  T
Q  214 ccgagagacaaggtcaacctctaatcgaaaagcattaagaatgtagcatatacaaattatatcagacacttgaatcataaattgaataaaaactctatta 313  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12358190 ccgagagacaaggttaacctctaatcgaaaagcattaagaatgtagcatatgcaaattaaatcagacacttgaatcataaattgaataaaaactctatta 12358289  T
Q  314 attatatcagcaaataagtagaggttcatcatggaacctgaatcaagaggtatttagttcacatggtaacagacgccattacaaaacaatagaaaaacat 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12358290 attatatcagcaaataagtagaggttcatcatggaacctgaatcaagaggtatttagttcacatggtaacagacgccattacaaaacaacagaaaaacat 12358389  T
Q  414 atcatatagagaacaaggggaggagaaaaccctatgtcttgatgttttgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtg 513  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12358390 atcatatagagaacaaggggaggagaaaaccctatgtcttgatgttgtgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtg 12358489  T
Q  514 cacaatggtctatgtttatagtttatcattgcttggaggttaagagacaag 564  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12358490 cacaatggtctatgtttatagtttatcattgcttggaggttaagagacaag 12358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 443
Target Start/End: Original strand, 19139316 - 19139502
Alignment:
Q  260 catatacaaattatatcagacact-tgaatcataaattgaataaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatc 357  Q
    ||||||||||||| |||||||| | ||||||||||| |  ||| ||||| ||||||||  ||| |  |||||||||||||||||||  ||| |   ||||    
T  19139316 catatacaaattaaatcagacaatgtgaatcataaactatatagaaactttattaattgaatccatgaaataagtagaggttcatcgcggagcactaatc 19139415  T
Q  358 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggaggagaaaac 443  Q
    ||||| | ||||||| |||||||||||| ||  |||||||||| || |||||   ||| | || |||||||||| |||| |||||||    
T  19139416 aagagatgtttagttacacatggtaacatacatcattacaaaataagagaaatgaataccctaaagagaacaagaggagaagaaaac 19139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 443
Target Start/End: Original strand, 20738715 - 20738901
Alignment:
Q  260 catatacaaattatatcagacact-tgaatcataaattgaataaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatc 357  Q
    ||||||||||||| |||||||| | ||||||||||| |  ||| ||||| ||||||||  ||| |  |||||||||||||||||||  ||| |   ||||    
T  20738715 catatacaaattaaatcagacaatgtgaatcataaactatatagaaactttattaattgaatccatgaaataagtagaggttcatcgcggagcactaatc 20738814  T
Q  358 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggaggagaaaac 443  Q
    ||||| | ||||||| |||||||||||| ||  |||||||||| || |||||   ||| | || |||||||||| |||| |||||||    
T  20738815 aagagatgtttagttacacatggtaacatacatcattacaaaataagagaaatgaataccctaaagagaacaagaggagaagaaaac 20738901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 5636964 - 5636919
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    |||||| |||||| ||| ||||||||||||||||| ||||||||||    
T  5636964 catatataaattaaatctgacacttgaatcataaactgaataaaaa 5636919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 560
Target Start/End: Original strand, 22334848 - 22334948
Alignment:
Q  460 ttgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaatggtctatgtttatagtttatcattgcttggaggttaagag 559  Q
    ||||| ||||||||||| ||||||||  ||||||| ||||| ||| |||| |||  ||||| ||| | ||||||||  |||||| ||| | |||||||||    
T  22334848 ttgatgcttgacccttgccttgtaccactagctttctgaattaataaaagagtgttcaatgatctttatttatagtgcatcattacttaggggttaagag 22334947  T
Q  560 a 560  Q
    |    
T  22334948 a 22334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 533
Target Start/End: Original strand, 24596560 - 24596632
Alignment:
Q  461 tgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaatggtctatgtttata 533  Q
    |||| ||||||||||| |||||||| | |||||| ||||||||| |||| |||  ||||||||| | ||||||    
T  24596560 tgatgcttgacccttgccttgtaccatcagctttctgaatgaataaaagagtgtgcaatggtctctatttata 24596632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 5e-36; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 98 - 445
Target Start/End: Original strand, 23907487 - 23907836
Alignment:
Q  98 gaatcataaccctaacaatcatacatgtatttaaattaaaagagattacattaaaatgaggaatttactactgttcttttttggacaccgtcatgatagt 197  Q
    ||||||||||| ||||| | |||| | ||||||| |||||||||||||  ||||||| || |||||| ||| |||||| || || ||||   | ||||||    
T  23907487 gaatcataaccttaacagttatacttatatttaatttaaaagagattaatttaaaataagaaatttattaccgttcttattcgggcaccaaaaggatagt 23907586  T
Q  198 caatcctataccttagccgagagacaaggtcaacctctaatcgaaaagcattaagaatgtagcatatacaaattatatcagacacttgaatcataaattg 297  Q
    || |  || ||||||||| | |||  |||| ||||  || | ||||| ||||||||||| | | ||||||||||| |||||||||||||||||||||||     
T  23907587 cagtaataaaccttagcctatagatcaggttaaccgttagttgaaaaacattaagaatggaacttatacaaattaaatcagacacttgaatcataaatta 23907686  T
Q  298 aataaaaactctattaattatat-cagcaaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattac 395  Q
    |||| ||||| ||||||||| || || |||||||||||| ||||||| | |||||  |||||| ||   ||||||| ||||||||||  |||  || |||    
T  23907687 aatacaaactttattaattaaatccaacaaataagtagaagttcatcgttgaaccctaatcaaaagaggtttagttacacatggtaatcgacatcaatac 23907786  T
Q  396 aaaacaatagaaaaacatatcatatagagaacaaggggaggagaaaaccc 445  Q
    ||||||||||||| ||||  |||||| | |||||  ||| ||||||||||    
T  23907787 aaaacaatagaaacacatgacatatacataacaaaaggatgagaaaaccc 23907836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 410
Target Start/End: Original strand, 21828560 - 21828711
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaattatat-cagcaaataagtagaggttcatcatggaacctgaatc- 357  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||   ||||||||  || |   ||||||| ||||||||||||||||||||  |||     
T  21828560 catatacaaattaaatcagacacttgaatcataaactgaataaaaaaattattaattgaatcccaaaaataagaagaggttcatcatggaaccttgatca 21828659  T
Q  358 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaa 410  Q
    ||||||  ||||||| ||||||| ||| |||  |||||| ||||||||||||||    
T  21828660 aagagg--tttagttgcacatggcaactgacatcattaccaaacaatagaaaaa 21828711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 33578744 - 33578658
Alignment:
Q  32 taacgatgggaagtttgtgtatttttgctgcaccaaaggctatacttgggacgtttccctaaagatgaatcataaccctaacaatca 118  Q
    ||||| ||||||||||| |||||| ||| |   ||||||||||||||| || |||  ||||||||||||||||||| ||||||||||    
T  33578744 taacggtgggaagtttgagtatttgtgccgtgacaaaggctatacttgtgatgttctcctaaagatgaatcataactctaacaatca 33578658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 437
Target Start/End: Original strand, 14280652 - 14280828
Alignment:
Q  261 atatacaaattatatcagacacttgaatcataaattgaataaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatcaa 359  Q
    |||||| ||||| |||||| | || ||| ||||| |||||||||||| |||||||   ||| | |||||||| || |||||||| |||||||| ||||||    
T  14280652 atatacgaattaaatcaga-atttaaattataaactgaataaaaactttattaatagaatccaacaaataagaaggggttcatcgtggaaccttaatcaa 14280750  T
Q  360 -gaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggagga 437  Q
     |||||  |||||| |  |||| ||| ||| |||||||||| ||||||||||||||| | || |||||||||| ||||||    
T  14280751 agaggt--ttagttgcttatggcaaccgacaccattacaaagcaatagaaaaacataccctagagagaacaagaggagga 14280828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 22488360 - 22488407
Alignment:
Q  390 cattacaaaacaatagaaaaacatatcatatagagaacaaggggagga 437  Q
    |||||||||||||| |||||||||||| || |||||||||| ||||||    
T  22488360 cattacaaaacaattgaaaaacatatcctagagagaacaagaggagga 22488407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 534
Target Start/End: Original strand, 19218757 - 19218830
Alignment:
Q  461 tgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaatggtctatgtttatag 534  Q
    |||| |||||||||||||||| |||||||||||| | ||||||| | | |||| |||| ||||| | |||||||    
T  19218757 tgatgcttgacccttgtcttgaaccgttagctttattaatgaataagaatgtgtacaagggtctctatttatag 19218830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 414
Target Start/End: Complemental strand, 33578448 - 33578359
Alignment:
Q  326 aataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacata 414  Q
    |||||||||||||||||| ||||| |  |||||||||   ||||| | ||||||||||| |||  |||| ||||||| ||||||||||||    
T  33578448 aataagtagaggttcatcgtggaatcctaatcaagagaggtttagctacacatggtaactgacatcattgcaaaacagtagaaaaacata 33578359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 21654615 - 21654579
Alignment:
Q  85 tttccctaaagatgaatcataaccctaacaatcatac 121  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  21654615 tttcccgaaagaggaatcataaccctaacaatcatac 21654579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1587 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold1587
Description:

Target: scaffold1587; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 148 - 351
Target Start/End: Original strand, 1137 - 1341
Alignment:
Q  148 ttaaaatgaggaatttactactgttcttttttggacaccgtcatgatagtcaatcctataccttagccgagagacaaggtcaacctctaatcgaaaagca 247  Q
    ||||||| || ||||||||| ||||| | ||| | ||||| || |||||||| || |||||||||||| |||||  ||||||||| ||| | ||||||||    
T  1137 ttaaaataagcaatttactattgttcatgtttaggcaccggcaagatagtcagtcatataccttagcctagagagtaggtcaaccgctagttgaaaagca 1236  T
Q  248 ttaagaatgtagcatatacaaattatatcagacacttgaatcataaattgaataaaaactctattaattatatc-agcaaataagtagaggttcatcatg 346  Q
    |||| | | || ||||||||||||| || ||||| |||||||||||  ||||||||||   ||||||||  ||| | |||||||||| ||||||||| ||    
T  1237 ttaaaagtataacatatacaaattaaataagacatttgaatcataatatgaataaaaaaattattaattgaatctaacaaataagtataggttcatcgtg 1336  T
Q  347 gaacc 351  Q
    |||||    
T  1337 gaacc 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 446
Target Start/End: Original strand, 17331761 - 17332196
Alignment:
Q  16 acatgaccccataatgtaacgatgggaagtttgtgtatttttgctgcaccaaaggctatacttgggacgtttccctaaagatgaatcataaccctaacaa 115  Q
    |||||||||| | |||||||| ||||||||| | |||||| ||| ||  |||||| |||||||| |||||| ||||||| |||||||||| |  ||||||    
T  17331761 acatgaccccgtgatgtaacggtgggaagttcgagtatttgtgccgcgacaaaggttatacttgcgacgttcccctaaaaatgaatcatagctataacaa 17331860  T
Q  116 tcatacatgtatttaaattaaaagagattacatta--aaatgaggaatttactactgttcttttttggacaccgtcatgatagtcaatcctataccttag 213  Q
    |||||  | || |  | |||||  ||||||  |||  |||| || || ||||| || ||||  ||  | ||||| ||||||||| | || ||||||||||    
T  17331861 tcatatttataatcga-ttaaacaagattaatttataaaataagcaagttactgctattctggttcaggcaccgacatgatagtaagtcttataccttag 17331959  T
Q  214 ccgagagacaaggtcaacctctaatcgaaaagcattaagaatgtagcatatacaaattatatcagacacttgaatcataaattgaata-aaaactctatt 312  Q
    || | |||  ||||||||  ||| | |||||||||| || ||| | |||||| |||||| || || || |||||||||||| | |||| |||||| |||     
T  17331960 cctatagatcaggtcaactgctagttgaaaagcattgagcatggaacatataaaaattaaattaggcaattgaatcataaactaaatacaaaactttatg 17332059  T
Q  313 aattatatc-agcaaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaa 410  Q
    ||||  ||| |  |||||||||||||||||||||||||||  |||||||||   ||||||| ||||||||||| |||    ||||||||||||| |||||    
T  17332060 aattgaatccaagaaataagtagaggttcatcatggaaccctaatcaagagaggtttagttacacatggtaactgacatagttacaaaacaata-aaaaa 17332158  T
Q  411 catat--catatagagaacaaggggaggagaaaaccct 446  Q
     ||||  | || |||||||||| |||||||||||||||    
T  17332159 aatattccctagagagaacaagaggaggagaaaaccct 17332196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 438
Target Start/End: Complemental strand, 10577214 - 10577033
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaa-ctctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatc 357  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| ||  || ||||  ||| | |||||||| |||||||||||||||||||  | ||    
T  10577214 catatacaaattaaatcagacacttgaatcataaactgaataaaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtc 10577115  T
Q  358 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggaggag 438  Q
    || ||   |||||||  |||||| |||| ||  ||||||||||||||| ||||||||| | || |||| ||||| |||||||    
T  10577114 aatagaggtttagttggacatggcaacaaacatcattacaaaacaatataaaaacataccctagagaggacaagaggaggag 10577033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 65 - 294
Target Start/End: Complemental strand, 25367168 - 25366939
Alignment:
Q  65 caaaggctatacttgggacgtttccctaaagatgaatcataaccctaacaatcatacatgtatttaaattaaaagagattacatta--aaatgaggaatt 162  Q
    |||||||||||||||  || || ||| ||||||||||||||| ||||||||||||||   |||| || |||||||| ||||  |||  |||| || ||||    
T  25367168 caaaggctatacttgcaac-ttccccaaaagatgaatcataaacctaacaatcatactcatattcaa-ttaaaagaaattaatttagaaaataagtaatt 25367071  T
Q  163 tactactgttcttttttggacaccgtcatgatagtcaatcctataccttagccgagagacaaggtcaacctctaatcgaaaagcattaagaatgtagcat 262  Q
    ||||||  ||||| ||||| ||||  || |||||||| || ||||||||| || | |||  |||| |||| || || ||||| |||| |||||| | |||    
T  25367070 tactaccattcttgtttgggcaccaacaagatagtcagtcatataccttaacctatagatcaggttaaccactcattgaaaaacattgagaatgaaacat 25366971  T
Q  263 atacaaattatatcagacacttgaatcataaa 294  Q
    |||||||||| |||| ||| ||||||||||||    
T  25366970 atacaaattaaatcaaacaattgaatcataaa 25366939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 430
Target Start/End: Complemental strand, 32022512 - 32022340
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaattatat-cagcaaataagtagaggttcatcatggaacctgaatca 358  Q
    ||||||||||||| || |||| ||||| | ||||| |||||||||||| ||||||||  || ||||||| ||||  ||||||||| ||||||   |||||    
T  32022512 catatacaaattaaataagacgcttgatttataaactgaataaaaactttattaattgaatccagcaaagaagtgaaggttcatcgtggaactctaatca 32022413  T
Q  359 agaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    ||||   |||| || ||||||||||| |||  ||||||||||||| | || |||||||| || ||||||||||    
T  32022412 agagtggtttaattacacatggtaaccgacatcattacaaaacaacataagaacatatcctaaagagaacaag 32022340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 24912481 - 24912535
Alignment:
Q  65 caaaggctatacttgggacgtttccctaaagatgaatcataaccctaacaatcata 120  Q
    ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  24912481 caaaggctatacttgcgac-ttcccctaaagatgaatcataaccctaacaatcata 24912535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 39134147 - 39134192
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||    
T  39134147 catatacaaattaaatcaaacacttgaatcataaattgaataaaaa 39134192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 34667468 - 34667404
Alignment:
Q  241 aaaagcattaagaatgtagcatatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    ||||||||||||||   | ||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  34667468 aaaagcattaagaactgaacatatacaaattaaatcagacacttgaattataaactgaataaaaa 34667404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 32022617 - 32022560
Alignment:
Q  116 tcatacatgtatttaaattaaaagagattacattaaaatgaggaatttactactgttc 173  Q
    |||||| ||||||||| |||||||||||||  ||||||| || |||||||||||||||    
T  32022617 tcatacttgtatttaatttaaaagagattaatttaaaataagcaatttactactgttc 32022560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 4733457 - 4733413
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaa 304  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||    
T  4733457 catatacaaattaaatcagatagttgaatcataaattgaataaaa 4733413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 13273659 - 13273711
Alignment:
Q  69 ggctatacttgggacgtttccctaaagatgaatcataaccctaacaatcatac 121  Q
    |||||||||||  ||||| ||||||||||||| |||||||| |||||||||||    
T  13273659 ggctatacttgcaacgttcccctaaagatgaaccataacccaaacaatcatac 13273711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 33519785 - 33519741
Alignment:
Q  261 atatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||    
T  33519785 atatacaaattaaatcaaacacttgaatcataaactgaataaaaa 33519741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 5676814 - 5676767
Alignment:
Q  390 cattacaaaacaatagaaaaacatatcatatagagaacaaggggagga 437  Q
    ||||||||||||||||||||||||| |||| | |||||||| ||||||    
T  5676814 cattacaaaacaatagaaaaacataccatagaaagaacaagaggagga 5676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 414
Target Start/End: Original strand, 7023664 - 7023743
Alignment:
Q  336 ggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacata 414  Q
    ||||||||||||||||  |||||||||   ||||||| ||||||| ||| |||| ||||||||||||| | |||||||||    
T  7023664 ggttcatcatggaaccataatcaagagaggtttagttgcacatggaaaccgacgtcattacaaaacaacataaaaacata 7023743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 26160499 - 26160453
Alignment:
Q  259 gcatatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    ||||||| |||||| ||||||||||||||||||||| | ||||||||    
T  26160499 gcatatataaattaaatcagacacttgaatcataaactaaataaaaa 26160453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 31859254 - 31859295
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaata 301  Q
    ||||||||||||| |||||||||||||||| |||| ||||||    
T  31859254 catatacaaattaaatcagacacttgaatcgtaaactgaata 31859295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 444 - 560
Target Start/End: Complemental strand, 21077838 - 21077722
Alignment:
Q  444 cctatgtcttgatgttttgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaatggtctatgtttatagtttatcatt 543  Q
    |||||||||||| | | ||||  |||||||||  |||||| || ||||||||||||||||| | |  ||| |||| ||||| | ||||||||  ||||||    
T  21077838 cctatgtcttgaagctctgatgattgacccttaccttgtatcgctagctttttgaatgaataagatagtggacaagggtctctatttatagtagatcatt 21077739  T
Q  544 gcttggaggttaagaga 560  Q
     ||| | ||||||||||    
T  21077738 acttaggggttaagaga 21077722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 277 - 560
Target Start/End: Original strand, 15453880 - 15454163
Alignment:
Q  277 agacacttgaatcataaattgaataaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-ca 374  Q
    ||||| |||||||||||||| |||||||||| ||||| ||  ||| | ||||||| |||||||||||| |||| ||  |||||||||   ||||| | |     
T  15453880 agacaattgaatcataaattcaataaaaactttattagttgaatccatcaaataaatagaggttcatcgtggatccc-aatcaagagtggtttagctacc 15453978  T
Q  375 catggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggaggagaaaaccctatgtcttgatgttttgatccttgaccct 474  Q
    ||||||||| |||  |||||  ||| |||| ||||| ||| | || |||||||||| |||||||||||||||||| |||||   |||||| ||||||| |    
T  15453979 catggtaactgacatcattatcaaataatataaaaatataacctagagagaacaagaggaggagaaaaccctatgccttgaaagtttgattcttgaccat 15454078  T
Q  475 tgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaatggtctatgtttatagtttatcattgcttggaggttaagaga 560  Q
    |||||||||||  ||| ||| | ||||||| ||||||||  ||| |||||   ||||||||| |||||| ||| | | ||||||||    
T  15454079 tgtcttgtacccctaggtttctaaatgaat-aaagtgtgtgcaagggtctcgatttatagttcatcattacttagggtttaagaga 15454163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 260 - 535
Target Start/End: Original strand, 17883925 - 17884202
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaattatatcag-caaataagtagaggttcatcatggaacctgaatca 358  Q
    ||||||||||||| |||| |||||||| ||||||| |||| ||| ||| ||||| ||  ||| | ||||| || ||||||||||  |||||||  |||||    
T  17883925 catatacaaattaaatcaaacacttgattcataaactgaa-aaacactttattagttgaatctgacaaatgagaagaggttcatattggaaccctaatca 17884023  T
Q  359 agaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggaggaga-aaaccctatgtcttgat 456  Q
    ||||   ||||||| ||||||| |||  ||  ||||||||||||||||||||||||| | || | || ||||| ||| || | ||| ||| || |||||     
T  17884024 agagaggtttagttgcacatggcaaccaacatcattacaaaacaatagaaaaacataccctagaaaggacaagaggatgacagaaatcctctgccttgaa 17884123  T
Q  457 gttttgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaatggtctatgtttatagt 535  Q
      | |||| ||||||||||| |||||||   ||||||| | ||||||| ||||| ||  ||||||||| | ||||||||    
T  17884124 tctctgatgcttgacccttgccttgtactactagctttctaaatgaataaaagtatgtgcaatggtctctatttatagt 17884202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 504
Target Start/End: Complemental strand, 24188556 - 24188515
Alignment:
Q  463 atccttgacccttgtcttgtaccgttagctttttgaatgaat 504  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  24188556 atccttgacccttgccttgtaccgctagctttttgaatgaat 24188515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 509
Target Start/End: Complemental strand, 18819302 - 18819182
Alignment:
Q  390 cattacaaaacaatagaaaaacatatcatatagagaacaaggggaggaga-aaaccctatgtcttgatgttttgatccttgacccttgtcttgtaccgtt 488  Q
    ||||||||||||||||||||||||| | ||   |||||||| |||||| | | | ||| ||||| || | ||||||  |||||| ||| |||||||||||    
T  18819302 cattacaaaacaatagaaaaacataccctagtaagaacaagaggaggatagagatcctctgtctggaagctttgatgtttgaccattgccttgtaccgtt 18819203  T
Q  489 agctttttgaatgaatgaaag 509  Q
    |||||| ||||| ||| ||||    
T  18819202 agctttctgaataaataaaag 18819182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 25474692 - 25474576
Alignment:
Q  324 caaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatag 422  Q
    |||||||| || |||||||| |||||||  |||||||||||  |||||| | ||||| |||||||  ||| ||||||||||||||||| ||| | || |     
T  25474692 caaataagaaggggttcatcgtggaaccataatcaagaggt--ttagttgctcatggcaacagacatcataacaaaacaatagaaaaagataccctagaa 25474595  T
Q  423 agaacaaggggaggagaaa 441  Q
    |||| ||| ||||||||||    
T  25474594 agaataagaggaggagaaa 25474576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 15453648 - 15453721
Alignment:
Q  29 atgtaacgatgggaagtttgtgtatttttgctgcaccaaaggctatacttgggacgtttccctaaagatgaatc 102  Q
    ||||||||  ||||||||   |||||| ||||||  ||||| ||||||||| |||||| |||||||||||||||    
T  15453648 atgtaacggcgggaagttcaagtatttgtgctgcgacaaagactatacttgcgacgttcccctaaagatgaatc 15453721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 14962924 - 14962956
Alignment:
Q  88 ccctaaagatgaatcataaccctaacaatcata 120  Q
    |||||||||||||||||||| ||||||||||||    
T  14962924 ccctaaagatgaatcataacactaacaatcata 14962956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 324 - 504
Target Start/End: Original strand, 11997310 - 11997491
Alignment:
Q  324 caaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatag 422  Q
    |||||||||||||||||| | |||||||  |||||||||   ||||||| ||||||||||| |||  ||||| ||||||||| | ||||||| | || ||    
T  11997310 caaataagtagaggttcaacgtggaaccctaatcaagagacgtttagttacacatggtaaccgacatcattaaaaaacaatatataaacata-cctaaag 11997408  T
Q  423 agaacaaggggaggagaaaaccctatgtcttgatgttttgatccttgacc-cttgtcttgtaccgttagctttttgaatgaat 504  Q
    |||||||| ||||||||||||||| || ||||| | | | || ||||||| |||||||||||| | |||||||  ||||||||    
T  11997409 agaacaagtggaggagaaaaccctttgccttgaagctctaatgcttgacctcttgtcttgtactgctagctttaggaatgaat 11997491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 19443621 - 19443717
Alignment:
Q  71 ctatacttgggacgtttccctaaagatgaatcataaccctaacaatcatacatgtatttaaattaaaagagattacattaaaatgaggaatttacta 167  Q
    ||||||||| || |||||  |||||||||||||||||  |||||||||||  | | ||||| |||||||||||||  ||||||| || |||||||||    
T  19443621 ctatacttgcgatgtttctttaaagatgaatcataactttaacaatcatatttatgtttaatttaaaagagattaatttaaaataagcaatttacta 19443717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 430
Target Start/End: Complemental strand, 20715199 - 20715163
Alignment:
Q  394 acaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    |||||||||||||||||||||||||||||||||||||    
T  20715199 acaaaacaatagaaaaacatatcatatagagaacaag 20715163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 30791365 - 30791309
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaatt 316  Q
    ||||||||||||| |||| |||||| ||||||||| |||||||||||| ||||||||    
T  30791365 catatacaaattaaatcaaacacttaaatcataaactgaataaaaactttattaatt 30791309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 430
Target Start/End: Complemental strand, 24131318 - 24131211
Alignment:
Q  324 caaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatag 422  Q
    |||||||  ||||||||||| |||||||  |||||||||   ||||||| ||||||||||| |||  |||||||||| |||| |||| |||||| || ||    
T  24131318 caaataataagaggttcatcttggaaccccaatcaagagaggtttagtttcacatggtaaccgacatcattacaaaataatataaaagcatatcctagag 24131219  T
Q  423 agaacaag 430  Q
    ||||||||    
T  24131218 agaacaag 24131211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 30803335 - 30803280
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaatt 316  Q
    ||||||||||||| || ||| ||||||||||||||||||||||||| | ||||||||    
T  30803335 catatacaaattaaat-agatacttgaatcataaattgaataaaaaatgtattaatt 30803280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 535
Target Start/End: Original strand, 19763414 - 19763529
Alignment:
Q  421 agagaacaaggggagga-gaaaaccctatgtcttgatgttttgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaat 519  Q
    |||||||||| |||||| ||| | ||| || ||||| | ||||||  |||||||||| ||||||||  ||||||||||||||||| |||| ||| | ||     
T  19763414 agagaacaagaggaggatgaagatcctctgccttgaagctttgatgtttgacccttgccttgtaccactagctttttgaatgaataaaagagtgtataag 19763513  T
Q  520 ggtctatgtttatagt 535  Q
    |||| || ||||||||    
T  19763514 ggtccatatttatagt 19763529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 25594149 - 25594192
Alignment:
Q  394 acaaaacaatagaaaaacatatcatatagagaacaaggggagga 437  Q
    ||||||||||||||||||||||| || |||||||||| ||||||    
T  25594149 acaaaacaatagaaaaacatatcttagagagaacaagaggagga 25594192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 20084185 - 20084080
Alignment:
Q  324 caaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatag 422  Q
    |||||||| || ||||||||||||||||  |||||| ||  |||||||| ||||||||||||  |  |||||||||| |||| ||||||||| | || ||    
T  20084185 caaataagaaggggttcatcatggaaccctaatcaa-agagatttagttgcacatggtaacaaccatcattacaaaataatataaaaacataccctagag 20084087  T
Q  423 agaacaa 429  Q
    |||||||    
T  20084086 agaacaa 20084080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 430
Target Start/End: Original strand, 16622121 - 16622170
Alignment:
Q  381 aacagacgccattacaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    |||| ||||||| ||||||||||||||||||||| | || ||||||||||    
T  16622121 aacatacgccataacaaaacaatagaaaaacataccctaaagagaacaag 16622170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 7742244 - 7742288
Alignment:
Q  261 atatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||    
T  7742244 atatacaaattaaatcagacattcgaatcataaactgaataaaaa 7742288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 18451729 - 18451765
Alignment:
Q  394 acaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    ||||||||||||||||||||||| || ||||||||||    
T  18451729 acaaaacaatagaaaaacatatcctagagagaacaag 18451765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 364
Target Start/End: Original strand, 26328383 - 26328459
Alignment:
Q  289 cataaattgaataaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatcaagaggt 364  Q
    |||||| ||||| |||||| |||| || ||||| | |||||||| || ||||||||||| ||||| |||||||||||    
T  26328383 cataaactgaatgaaaactttatttataatatccaacaaataagaaggggttcatcatgaaaccttaatcaagaggt 26328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 23876695 - 23876639
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaatt 316  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  23876695 catatacaaattaaatcagacacttgaattataaattgaataaaaactttattaatt 23876639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 485
Target Start/End: Original strand, 12774222 - 12774451
Alignment:
Q  259 gcatatacaaattatatcagacacttgaatcataaattgaat-aaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaat 356  Q
    |||||||||||||| ||||||||||||||| ||||| ||||| ||||||| || |||||  ||| | |||||||  | ||||||||| ||||||||  ||    
T  12774222 gcatatacaaattaaatcagacacttgaattataaactgaataaaaaactttactaattgaatctaacaaataataaaaggttcatcttggaaccttgat 12774321  T
Q  357 c-aagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggagga-gaaaaccctatgtctt 453  Q
    | ||||||  ||||||| ||||||| |||   |  |||||||||||||||||||||||||   || |||||||||| | || | ||||| | | || |||    
T  12774322 caaagagg--tttagttgcacatggcaaccttcatcattacaaaacaatagaaaaacataatctagagagaacaagagtagaaggaaaatcttctgcctt 12774419  T
Q  454 gatgttttgatccttgacccttgtcttgtacc 485  Q
    || ||| ||||  |||||||||||||||||||    
T  12774420 gaagttctgatgtttgacccttgtcttgtacc 12774451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 414
Target Start/End: Original strand, 6887565 - 6887721
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaatt-atatcagcaaataagtagaggttcatcatggaacctgaatc- 357  Q
    ||||||||||||| |||||||||||| |||||||| |||||||| | | |||||||| |  ||| |||||| | ||||| ||||| |||||||  ||||     
T  6887565 catatacaaattaaatcagacacttggatcataaactgaataaacaatttattaattgaattcaacaaatatgaagaggatcatcgtggaaccctaatca 6887664  T
Q  358 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaata-gaaaaacata 414  Q
    ||||||  ||||||| ||||||| ||| |||  ||||||||||||||| ||||||||||    
T  6887665 aagagg--tttagttgcacatggcaaccgacatcattacaaaacaataggaaaaacata 6887721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 24927347 - 24927394
Alignment:
Q  390 cattacaaaacaatagaaaaacatatcatatagagaacaaggggagga 437  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||    
T  24927347 cattacaaaacaatagaaaaacataccctaaagagaacaaggggagga 24927394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 438
Target Start/End: Original strand, 28259902 - 28260080
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaat-aaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatc 357  Q
    ||||||||||||| ||  |||||||||||| |||||||||| ||||||| ||||||||  ||| | |||||||| ||||||||||| | |||||  ||||    
T  28259902 catatacaaattaaatttgacacttgaatcttaaattgaataaaaaactttattaattgaatctatcaaataagaagaggttcatcctagaaccctaatc 28260001  T
Q  358 aagaggtatttagt-tcacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggaggag 438  Q
    || |||  ||||||  ||| ||  ||| |||  ||| | |||| |||||||||||||| |||| |||||||||| |||||||    
T  28260002 aa-agg--tttagtggcacgtgacaactgacatcatcataaaataatagaaaaacataccatagagagaacaagaggaggag 28260080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 5154527 - 5154482
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||||    
T  5154527 catatactaattaaatcacacacttgaatcataaattgaataaaaa 5154482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 509
Target Start/End: Original strand, 27085069 - 27085181
Alignment:
Q  396 aaaacaatagaaaaacatatcatatagagaacaaggggagga-gaaaaccctatgtcttgatgttttgatccttgacccttgtcttgtaccgttagcttt 494  Q
    ||||||||| ||||||||| | ||  ||||||||| |||||| | | | ||| |||||||| |||||||| ||||||||||| |||||||| | ||||||    
T  27085069 aaaacaatataaaaacata-cttaatgagaacaagaggaggatggagatcctctgtcttgaagttttgatgcttgacccttgacttgtacc-taagcttt 27085166  T
Q  495 ttgaatgaatgaaag 509  Q
    || ||||||| ||||    
T  27085167 ttaaatgaataaaag 27085181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 260 - 437
Target Start/End: Original strand, 26499215 - 26499393
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaactctattaattatat-cagcaaataagtagaggttcatcatggaacctgaatca 358  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||  || | ||||||||| || | |||| | || ||||| |||||    
T  26499215 catatacaaattaaaccagacacttgaatcataaattgtataaaaactttattaattcaatcccgcaaataagaagggtttcaccgtgaaaccttaatca 26499314  T
Q  359 agaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggagga 437  Q
    | ||  |||||||| ||||||  |||| ||   |||||||| ||||| ||||||||| | || |||||||||| ||||||    
T  26499315 a-agagatttagttgcacatgacaacaaacataattacaaagcaatataaaaacataccttagagagaacaagaggagga 26499393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 261 - 438
Target Start/End: Original strand, 9395954 - 9396135
Alignment:
Q  261 atatacaaattatatcagacacttgaatcataaattgaataaaaa--ctctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatc 357  Q
    |||||||||||| ||||||   |||||||||||||||||||||||  || |||||||   ||| | ||| |||| ||| ||||||| |||||||  ||||    
T  9395954 atatacaaattaaatcagatgtttgaatcataaattgaataaaaaaactttattaatcgaatccaacaattaagaagatgttcatcttggaaccataatc 9396053  T
Q  358 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaaggggaggag 438  Q
    |||||   ||||||| ||||||| ||| |||  ||||| |||||||| |||||||||||| |  |||||||||| |||||||    
T  9396054 aagagaggtttagtttcacatggcaaccgacatcattataaaacaattgaaaaacatatcctgaagagaacaagaggaggag 9396135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 10976426 - 10976471
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||    
T  10976426 catatacaaattaaatcagacacttgaatcataaactggataaaaa 10976471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 430
Target Start/End: Original strand, 16174711 - 16174884
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaat-aaaaactctattaattatat-cagcaaataagtagaggttcatcatggaacctgaatc 357  Q
    |||||| |||||| ||| ||||||||||||||||| ||||| ||||||| ||||||||  || ||  ||||||| |  || ||||  ||||| |  ||||    
T  16174711 catatagaaattaaatccgacacttgaatcataaactgaataaaaaactttattaattgaatccaagaaataagaaaggggtcatattggaatcctaatc 16174810  T
Q  358 aagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    |||||  |||||||| |||||||||||| ||  ||||| |||| |||||||||| ||| | || ||||||||||    
T  16174811 aagagagatttagttgcacatggtaacatacatcattataaaataatagaaaaatataccgtagagagaacaag 16174884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 32929827 - 32929872
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||    
T  32929827 catatacaaattaaatcagacacttgaatcataaactaaataaaaa 32929872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 17859973 - 17860009
Alignment:
Q  391 attacaaaacaatagaaaaacatatcatatagagaac 427  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17859973 attacaaaacaatagaaaaacataccatatagagaac 17860009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 13123671 - 13123584
Alignment:
Q  264 tacaaattatatcagacacttgaatcataaattgaata--aaaactctattaattatatc-agcaaataagtagaggttcatcatgga 348  Q
    ||||||||| | ||||||||||||||||||| ||||||  ||||  |||||||||  ||| |  |||||| |||||||||||||||||    
T  13123671 tacaaattaaagcagacacttgaatcataaactgaatataaaaaaactattaattgaatccaataaataactagaggttcatcatgga 13123584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 430
Target Start/End: Complemental strand, 31314300 - 31314128
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaata-aaaactctattaattatat-cagcaaataagtagaggttcatcatggaacctgaatc 357  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| |||||| ||||||||  || || |||| ||| ||||| ||||| |||||||  ||||    
T  31314300 catatacaaattaaatcagacacttaaatcatacattgaataaaaaactttattaattgaatccaacaaacaagaagaggctcatcttggaaccctaatc 31314201  T
Q  358 aagaggtattta-gttcacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    |||||   ||||  ||||||||  |||| ||  |||||| |||||||||||||||| | |||| ||||||||||    
T  31314200 aagagaggtttattttcacatgaaaacaaacatcattac-aaacaatagaaaaacaaaccatagagagaacaag 31314128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 324 - 535
Target Start/End: Original strand, 15416464 - 15416675
Alignment:
Q  324 caaataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatag 422  Q
    |||||||||||||||||||| |||||||  ||| || ||   ||||||| ||||||  ||| |||  | ||||||||||| ||||||||||| || | ||    
T  15416464 caaataagtagaggttcatcgtggaaccctaattaatagaggtttagttacacatgacaaccgacatctttacaaaacaagagaaaaacataccaaagag 15416563  T
Q  423 agaacaaggggaggagaaaaccctatgtcttgatgttttgatccttgacccttgtcttgtaccgttagctttttgaatgaatgaaagtgtgcacaatggt 522  Q
    |||||||  ||||||||||||||| |  ||||| | | |||| |||||||||||  |||||  |  |  ||||||||||||| |||||||| | ||||||    
T  15416564 agaacaa-aggaggagaaaaccctctcccttgaagctctgatgcttgacccttgctttgtattgcaaattttttgaatgaataaaagtgtgtataatggt 15416662  T
Q  523 ctatgtttatagt 535  Q
    || | ||||||||    
T  15416663 ctgtatttatagt 15416675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 289 - 430
Target Start/End: Complemental strand, 12810883 - 12810742
Alignment:
Q  289 cataaattgaataaaaactctattaattatatc-agcaaataagtagaggttcatcatggaacctgaatcaagaggtatttagttcacatggtaacagac 387  Q
    |||||| ||||| |||||| ||||||||||||| | |||||||| ||  |||||||||||||||  ||||||||||| |||  | | ||||| |||| ||    
T  12810883 cataaactgaatgaaaactttattaattatatccaacaaataagaaggagttcatcatggaaccctaatcaagaggt-tttgttgctcatggcaacaaac 12810785  T
Q  388 gccattacaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    | ||| |||||| ||||||||| |||| | || ||||||||||    
T  12810784 gtcataacaaaataatagaaaagcataccctaaagagaacaag 12810742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 14744937 - 14744977
Alignment:
Q  390 cattacaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  14744937 cattacaaaacaatagaaaaacatatcatagagagaacaag 14744977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 15416234 - 15416270
Alignment:
Q  85 tttccctaaagatgaatcataaccctaacaatcatac 121  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15416234 tttccttaaagatgaatcataaccctaacaatcatac 15416270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 21549272 - 21549225
Alignment:
Q  390 cattacaaaacaatagaaaaacatatcatatagagaacaaggggagga 437  Q
    ||||||||||||||||||||||||| | || |||||||||| ||||||    
T  21549272 cattacaaaacaatagaaaaacataccctagagagaacaagaggagga 21549225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 25964544 - 25964579
Alignment:
Q  86 ttccctaaagatgaatcataaccctaacaatcatac 121  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25964544 ttccctaaagatgaatcataatcctaacaatcatac 25964579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 13807158 - 13807292
Alignment:
Q  240 gaaaagcattaagaatgtagcatatacaaattatatca-gacacttgaatcataaattgaataaaaactctattaattatat-cagcaaataagtagagg 337  Q
    |||||||||||||||  || ||||||||||||| |||| |  | |||||||||||| | |||| ||||| ||||||||  || ||  ||||||||| |||    
T  13807158 gaaaagcattaagaacatatcatatacaaattaaatcatgggaattgaatcataaactaaatagaaactttattaattgaatccaataaataagtacagg 13807257  T
Q  338 ttcatcatggaacctgaatcaagaggtatttagtt 372  Q
    ||||||||| |||   ||||||||| | |||||||    
T  13807258 ttcatcatgaaactctaatcaagagatgtttagtt 13807292  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 18396371 - 18396338
Alignment:
Q  88 ccctaaagatgaatcataaccctaacaatcatac 121  Q
    |||||||||||||||||||||||| |||||||||    
T  18396371 ccctaaagatgaatcataaccctatcaatcatac 18396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 23421018 - 23421063
Alignment:
Q  260 catatacaaattatatcagacacttgaatcataaattgaataaaaa 305  Q
    ||||||||||| | ||| ||||||||||||||||| ||||||||||    
T  23421018 catatacaaatcaaatctgacacttgaatcataaactgaataaaaa 23421063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 504
Target Start/End: Original strand, 11322 - 11367
Alignment:
Q  459 tttgatccttgacccttgtcttgtaccgttagctttttgaatgaat 504  Q
    |||||| ||||||||||| |||||| |||||||||| |||||||||    
T  11322 tttgatgcttgacccttgccttgtaacgttagctttctgaatgaat 11367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 435
Target Start/End: Complemental strand, 37671 - 37563
Alignment:
Q  327 ataagtagaggttcatcatggaacctgaatcaagaggtatttagtt-cacatggtaacagacgccattacaaaacaatagaaaaacatatcatatagaga 425  Q
    ||||| || ||||||||||||||||  ||| |||||   ||||||| | ||||| ||| |||| |||||||||||||| |||||||||| | || |||||    
T  37671 ataagaaggggttcatcatggaaccctaat-aagagaattttagttgcccatggcaaccgacgtcattacaaaacaattgaaaaacataccctagagaga 37573  T
Q  426 acaaggggag 435  Q
    ||||| ||||    
T  37572 acaagtggag 37563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 5231 - 5267
Alignment:
Q  394 acaaaacaatagaaaaacatatcatatagagaacaag 430  Q
    ||||||||||||||||||||||| || ||||||||||    
T  5231 acaaaacaatagaaaaacatatcctagagagaacaag 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 11027 - 11083
Alignment:
Q  261 atatacaaattatatcagacacttgaatcataaattgaataaaaactctattaatta 317  Q
    |||||||||||| |||||||  | |||||||||| ||||||||||||  ||||||||    
T  11027 atatacaaattaaatcagactatagaatcataaactgaataaaaacttgattaatta 11083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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