View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20760_high_28 (Length: 226)

Name: NF20760_high_28
Description: NF20760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20760_high_28
NF20760_high_28
[»] chr8 (30 HSPs)
chr8 (1-105)||(3655252-3655356)
chr8 (106-217)||(16383377-16383488)
chr8 (106-217)||(16056390-16056501)
chr8 (106-217)||(24307782-24307893)
chr8 (106-217)||(30479463-30479574)
chr8 (106-217)||(34307216-34307327)
chr8 (106-217)||(32032725-32032835)
chr8 (106-187)||(24307629-24307710)
chr8 (105-210)||(15048178-15048282)
chr8 (106-210)||(4854859-4854963)
chr8 (108-210)||(10621083-10621185)
chr8 (104-210)||(15197331-15197437)
chr8 (104-210)||(43414577-43414683)
chr8 (103-176)||(20074964-20075037)
chr8 (105-210)||(40423939-40424044)
chr8 (111-171)||(5957835-5957895)
chr8 (106-210)||(12831047-12831151)
chr8 (104-210)||(504117-504223)
chr8 (113-210)||(14547929-14548026)
chr8 (106-171)||(37038479-37038544)
chr8 (106-210)||(1179936-1180040)
chr8 (103-210)||(23122593-23122700)
chr8 (103-210)||(34012292-34012399)
chr8 (150-217)||(32707992-32708061)
chr8 (106-211)||(10284626-10284731)
chr8 (106-211)||(15258924-15259029)
chr8 (127-211)||(8841427-8841511)
chr8 (106-210)||(44507083-44507187)
chr8 (106-217)||(17443825-17443936)
chr8 (106-211)||(42221515-42221620)
[»] chr5 (24 HSPs)
chr5 (106-217)||(2252157-2252268)
chr5 (106-217)||(3921254-3921365)
chr5 (104-210)||(28177773-28177879)
chr5 (106-216)||(39688887-39688997)
chr5 (105-210)||(26720515-26720620)
chr5 (105-210)||(26990264-26990369)
chr5 (106-191)||(6679698-6679783)
chr5 (106-210)||(2740274-2740378)
chr5 (106-210)||(15409606-15409710)
chr5 (104-171)||(14831812-14831879)
chr5 (111-210)||(18520880-18520979)
chr5 (111-171)||(16327906-16327966)
chr5 (102-210)||(40145403-40145511)
chr5 (104-210)||(42414298-42414404)
chr5 (106-171)||(33825359-33825424)
chr5 (110-169)||(10356638-10356698)
chr5 (106-210)||(36732938-36733042)
chr5 (103-210)||(33149634-33149741)
chr5 (105-171)||(35785198-35785264)
chr5 (106-171)||(35943927-35943992)
chr5 (113-209)||(13811659-13811755)
chr5 (106-189)||(9603813-9603896)
chr5 (106-217)||(31008988-31009099)
chr5 (111-165)||(36875644-36875698)
[»] chr6 (15 HSPs)
chr6 (105-217)||(15508013-15508125)
chr6 (106-217)||(15990031-15990142)
chr6 (106-217)||(30341349-30341460)
chr6 (105-217)||(4231547-4231659)
chr6 (106-210)||(31976248-31976352)
chr6 (104-217)||(31953019-31953132)
chr6 (103-210)||(32869675-32869782)
chr6 (106-210)||(31110757-31110859)
chr6 (111-171)||(28536521-28536581)
chr6 (106-177)||(12732482-12732553)
chr6 (111-210)||(22880654-22880753)
chr6 (104-210)||(17598552-17598658)
chr6 (127-210)||(11427639-11427722)
chr6 (127-210)||(31109396-31109479)
chr6 (150-211)||(30870058-30870119)
[»] chr3 (33 HSPs)
chr3 (105-217)||(45058542-45058653)
chr3 (128-217)||(36331318-36331407)
chr3 (99-213)||(42823104-42823218)
chr3 (106-210)||(41189760-41189864)
chr3 (106-217)||(14623828-14623939)
chr3 (103-210)||(26141528-26141635)
chr3 (111-217)||(13898044-13898150)
chr3 (101-210)||(53982006-53982115)
chr3 (105-210)||(20764911-20765016)
chr3 (106-210)||(11347918-11348022)
chr3 (106-210)||(47531865-47531969)
chr3 (106-210)||(51419356-51419460)
chr3 (109-211)||(26754698-26754800)
chr3 (106-211)||(8076393-8076498)
chr3 (105-210)||(33644199-33644304)
chr3 (106-210)||(11907371-11907475)
chr3 (110-210)||(52629304-52629404)
chr3 (106-209)||(27714888-27714991)
chr3 (111-210)||(31456694-31456793)
chr3 (127-210)||(48587087-48587170)
chr3 (106-188)||(24699972-24700054)
chr3 (106-171)||(11095388-11095453)
chr3 (106-187)||(35536626-35536707)
chr3 (106-171)||(49607414-49607479)
chr3 (110-189)||(25395350-25395429)
chr3 (106-176)||(36331408-36331478)
chr3 (106-171)||(8956762-8956827)
chr3 (106-171)||(33118886-33118951)
chr3 (106-171)||(54868930-54868995)
chr3 (111-211)||(30801728-30801828)
chr3 (106-176)||(35965804-35965874)
chr3 (111-211)||(25407142-25407243)
chr3 (106-210)||(17470405-17470509)
[»] chr1 (29 HSPs)
chr1 (105-217)||(50590989-50591101)
chr1 (105-217)||(41608482-41608594)
chr1 (104-217)||(47748441-47748553)
chr1 (106-217)||(5958989-5959100)
chr1 (147-217)||(44332360-44332430)
chr1 (106-210)||(32813247-32813351)
chr1 (106-210)||(3000319-3000423)
chr1 (106-210)||(37926434-37926538)
chr1 (103-210)||(27564731-27564838)
chr1 (105-210)||(9474872-9474977)
chr1 (106-191)||(45044575-45044660)
chr1 (101-210)||(49811523-49811632)
chr1 (106-206)||(2581915-2582015)
chr1 (106-210)||(38595154-38595258)
chr1 (99-210)||(26440727-26440838)
chr1 (106-179)||(23597118-23597191)
chr1 (106-171)||(51898718-51898783)
chr1 (104-176)||(37649196-37649268)
chr1 (104-191)||(6260868-6260955)
chr1 (111-210)||(44548372-44548471)
chr1 (103-189)||(3302550-3302636)
chr1 (104-210)||(47452316-47452422)
chr1 (106-211)||(7740733-7740838)
chr1 (105-210)||(48716278-48716383)
chr1 (128-210)||(8346384-8346466)
chr1 (133-210)||(41758832-41758909)
chr1 (106-210)||(43132-43236)
chr1 (106-210)||(38632317-38632421)
chr1 (106-210)||(50630458-50630562)
[»] chr4 (30 HSPs)
chr4 (106-217)||(8343152-8343263)
chr4 (106-217)||(19670705-19670816)
chr4 (106-217)||(55475191-55475302)
chr4 (106-217)||(32766958-32767069)
chr4 (106-217)||(29547948-29548059)
chr4 (106-213)||(47986208-47986315)
chr4 (106-217)||(50813881-50813992)
chr4 (127-217)||(17983732-17983822)
chr4 (106-217)||(55079702-55079814)
chr4 (103-217)||(18924484-18924598)
chr4 (114-217)||(29589729-29589831)
chr4 (106-217)||(44536735-44536845)
chr4 (105-210)||(11511458-11511563)
chr4 (105-210)||(31910191-31910296)
chr4 (106-211)||(50052423-50052528)
chr4 (105-210)||(6034043-6034148)
chr4 (104-171)||(40574777-40574844)
chr4 (101-210)||(48183045-48183154)
chr4 (129-217)||(29977908-29977996)
chr4 (105-176)||(50526201-50526272)
chr4 (106-210)||(480443-480547)
chr4 (106-210)||(41236347-41236451)
chr4 (106-211)||(48647721-48647826)
chr4 (106-210)||(42044363-42044467)
chr4 (104-171)||(3481652-3481719)
chr4 (127-210)||(24995103-24995186)
chr4 (106-211)||(29239886-29239991)
chr4 (105-210)||(54473529-54473634)
chr4 (106-210)||(29234241-29234345)
chr4 (150-210)||(41823926-41823986)
[»] chr7 (32 HSPs)
chr7 (105-217)||(32564415-32564527)
chr7 (106-217)||(22343361-22343472)
chr7 (106-217)||(41915741-41915852)
chr7 (106-217)||(38044197-38044308)
chr7 (104-217)||(8238210-8238324)
chr7 (106-217)||(7727906-7728017)
chr7 (106-217)||(40846102-40846213)
chr7 (106-196)||(26296644-26296734)
chr7 (107-210)||(35522877-35522980)
chr7 (106-196)||(46374812-46374902)
chr7 (106-210)||(46033797-46033901)
chr7 (106-210)||(8080379-8080483)
chr7 (104-210)||(19329840-19329946)
chr7 (104-209)||(21234399-21234504)
chr7 (106-210)||(3434562-3434666)
chr7 (106-210)||(7389389-7389493)
chr7 (106-211)||(35468850-35468955)
chr7 (106-211)||(36208173-36208278)
chr7 (105-210)||(38267039-38267144)
chr7 (106-210)||(36361909-36362013)
chr7 (104-210)||(35137531-35137637)
chr7 (106-171)||(19436222-19436287)
chr7 (106-210)||(36362026-36362130)
chr7 (106-210)||(38837217-38837321)
chr7 (105-177)||(39255952-39256024)
chr7 (111-210)||(3784000-3784099)
chr7 (106-177)||(18207180-18207251)
chr7 (104-158)||(31735882-31735936)
chr7 (111-189)||(32045842-32045920)
chr7 (106-171)||(40957707-40957772)
chr7 (111-211)||(2318238-2318338)
chr7 (106-210)||(4999510-4999614)
[»] chr2 (32 HSPs)
chr2 (106-217)||(45097724-45097835)
chr2 (104-217)||(43490119-43490232)
chr2 (106-217)||(13365351-13365464)
chr2 (127-217)||(2997476-2997566)
chr2 (106-217)||(38732354-38732465)
chr2 (104-210)||(40613898-40614004)
chr2 (106-210)||(42257193-42257297)
chr2 (160-217)||(3034972-3035029)
chr2 (97-210)||(38273138-38273251)
chr2 (106-210)||(9058480-9058584)
chr2 (106-210)||(5574484-5574588)
chr2 (106-210)||(36168836-36168940)
chr2 (111-210)||(28863460-28863559)
chr2 (106-180)||(15428766-15428840)
chr2 (106-211)||(33436095-33436200)
chr2 (106-211)||(33436211-33436316)
chr2 (105-176)||(17820034-17820105)
chr2 (106-210)||(30915463-30915567)
chr2 (111-210)||(19930816-19930915)
chr2 (106-217)||(26891493-26891604)
chr2 (103-210)||(28381651-28381758)
chr2 (104-210)||(13438341-13438447)
chr2 (106-210)||(2533124-2533227)
chr2 (106-210)||(7465731-7465835)
chr2 (106-210)||(10249378-10249482)
chr2 (106-210)||(17473020-17473124)
chr2 (105-171)||(40701477-40701543)
chr2 (106-211)||(20700815-20700920)
chr2 (104-212)||(27864702-27864810)
chr2 (106-206)||(32505648-32505748)
chr2 (149-196)||(3737986-3738033)
chr2 (106-171)||(38882849-38882913)
[»] scaffold0018 (1 HSPs)
scaffold0018 (131-217)||(152523-152609)
[»] scaffold0316 (1 HSPs)
scaffold0316 (103-222)||(17055-17170)
[»] scaffold0321 (1 HSPs)
scaffold0321 (106-171)||(10144-10209)


Alignment Details
Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3655252 - 3655356
Alignment:
Q  1 agatgggagctcatgaataatcatatctctagaaatatacaataatgtaatgtactttttattttggaaatgtgttaaaatccacatgaatgctagaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||    
T  3655252 agatgggagctcatgaataatcatatctctagaaatatacaataatgtaatgtactttttattttggaaatgtctcaagatccacatgaatgctagaaat 3655351  T
Q  101 tatat 105  Q
    |||||    
T  3655352 tatat 3655356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 16383377 - 16383488
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  16383477 tctttcttcttc 16383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 16056501 - 16056390
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||| ||| ||||| | || |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16056402  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  16056401 tctttcttcttc 16056390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 24307893 - 24307782
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| | || |||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  24307793 tctttcttcttc 24307782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 30479574 - 30479463
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||| ||| |||||| ||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  30479474 tctttcttcttc 30479463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 34307216 - 34307327
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||| ||||||| |||||| ||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  34307316 tctttcttcttc 34307327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 32032725 - 32032835
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| | || |||||| ||||| |||||||||||||||||||||||||| || || |||||| ||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttc 32032823  T
Q  206 tctttcttcttc 217  Q
    ||||||| ||||    
T  32032824 tctttctccttc 32032835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 24307629 - 24307710
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacc 187  Q
    |||||||||||||||||||  |||||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggccatatggacc 24307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 15048282 - 15048178
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    |||||||||||||||| |||| |||||||||||||| |||| |||||| ||||| |||||||||||| || |||| ||||||||||| |||| | |||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  205 ctcttt 210  Q
    ||||||    
T  15048183 ctcttt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 4854963 - 4854859
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| |||||||||||||| |||| || ||||| |||||||||||||| ||||||||| |||||||| || |||| | ||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  206 tcttt 210  Q
    |||||    
T  4854863 tcttt 4854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 10621185 - 10621083
Alignment:
Q  108 gttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctc 207  Q
    ||||||||||||| |||| ||||||||| |||| |||| |||||||||||| |||||||||||| || |||| || || ||||| |||| | ||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  208 ttt 210  Q
    |||    
T  10621085 ttt 10621083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 15197331 - 15197437
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 15197430  T
Q  204 tctcttt 210  Q
    |||||||    
T  15197431 tctcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 43414683 - 43414577
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    ||||||||||||||||| |||| ||||| |||||| | |||| |||||||||||| |||||||| ||| |||| || ||||| ||||| |||| | ||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactt 43414584  T
Q  204 tctcttt 210  Q
    |||||||    
T  43414583 tctcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 20075037 - 20074964
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 176  Q
    ||||||| |||||||||| |||| |||||||||||||| || | ||||||||||||||||||| ||||| ||||    
T  20075037 tatgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 40424044 - 40423939
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| | |  |||||||||||||| |||| |||||| ||||| |||||||||||| || | ||| |||||||||| |||| | |||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  205 ctcttt 210  Q
    ||||||    
T  40423944 ctcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 5957835 - 5957895
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||||||||| |||| |||||||||||||| |||| |||||||||||| ||||||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgaca 5957895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||| ||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  206 tcttt 210  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 504223 - 504117
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||  |||||||||||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | || |    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacat 504124  T
Q  204 tctcttt 210  Q
    |||||||    
T  504123 tctcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 14547929 - 14548026
Alignment:
Q  113 gatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||| |||  |||||||||||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 37038479 - 37038544
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| ||||  ||||||||||||| |||| |||||||||||| ||||||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgaca 37038544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||||||||| || | ||| ||||  |||| |||| | ||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  206 tcttt 210  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 23122700 - 23122593
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||| |||||||||| |||  |||| ||||||||| |||  |||||||||||| |||||||||||| || | ||  ||||||||||  ||| | |||    
T  23122700 tatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 23122601  T
Q  203 ttctcttt 210  Q
    ||||||||    
T  23122600 ttctcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 34012399 - 34012292
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||| ||||| || | ||  |||| ||||| |||| | |||    
T  34012399 tatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 34012300  T
Q  203 ttctcttt 210  Q
    ||||||||    
T  34012299 ttctcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 32708061 - 32707992
Alignment:
Q  150 acacccacataaaaatctgacatgtggccatatggaccccgcgcaagt--atactttctctttcttcttc 217  Q
    ||||||| | |||||||||| ||||||| ||||||||||||| |||||  | ||||||||||||||||||    
T  32708061 acacccatacaaaaatctgagatgtggctatatggaccccgcacaagtacacactttctctttcttcttc 32707992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 10284731 - 10284626
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||  |||| ||| ||||| || | |||||||||||| |||||| ||||| || | ||  |||||||||| |||| | ||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  206 tctttc 211  Q
    ||||||    
T  10284631 tctttc 10284626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 15259029 - 15258924
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| | |  ||||| |||||||| | || | |||| ||||||||||||||||||||||| ||  ||||||| || |||| | | ||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttc 15258930  T
Q  206 tctttc 211  Q
    ||||||    
T  15258929 tctttc 15258924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 8841511 - 8841427
Alignment:
Q  127 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttc 211  Q
    ||||||||||| || |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | ||||||||||||    
T  8841511 cttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttc 8841427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 44507187 - 44507083
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||||||| |||| || | || ||||||||| |||||||||||| || | ||  |||||||||  |||| ||||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  206 tcttt 210  Q
    |||||    
T  44507087 tcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 17443825 - 17443936
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||  |||||||| ||||| ||   || |||| |||| ||||||||||||||| | ||| |||||||| | |||  | ||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  206 tctttcttcttc 217  Q
    |||||| |||||    
T  17443925 tctttcatcttc 17443936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 42221515 - 42221620
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| |||||||| ||||| |  | | |||||||||| |||||||||||| ||   ||||||||||||   |||| | ||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  206 tctttc 211  Q
    ||||||    
T  42221615 tctttc 42221620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 2252268 - 2252157
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  2252168 tctttcttcttc 2252157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 3921365 - 3921254
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  3921265 tctttcttcttc 3921254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 28177773 - 28177879
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    ||||||||||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| |||| || ||||||||||| |||  | ||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  204 tctcttt 210  Q
    |||||||    
T  28177873 tctcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 39688997 - 39688887
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||| ||||||||| | || |||||||||||| |||||||||| |||||| |||||| |||||||  ||||| ||||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttc 39688898  T
Q  206 tctttcttctt 216  Q
    |||||||||||    
T  39688897 tctttcttctt 39688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 26720515 - 26720620
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    |||||||||||||||| |||| |||||||||||||| |||| || ||||| ||| |||||||||||| ||||||| ||||| ||||| |||| | |||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  205 ctcttt 210  Q
    ||||||    
T  26720615 ctcttt 26720620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 26990264 - 26990369
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    |||||||||||||||| |||| |||||||||||||| |||| || ||||| ||| |||||||||||| ||||||| ||||| ||||| |||| | |||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  205 ctcttt 210  Q
    ||||||    
T  26990364 ctcttt 26990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 6679698 - 6679783
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgc 191  Q
    ||||||||||||||| ||||  ||||||||||||| |||  |||||||||||| |||||||||||| |||| || |||||||||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgc 6679783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 2740274 - 2740378
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  206 tcttt 210  Q
    |||||    
T  2740374 tcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 15409710 - 15409606
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| |||||||| ||||| |  | |||||||||||| |||||||||||| || |||| ||||||||||| |||| | ||| ||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctc 15409611  T
Q  206 tcttt 210  Q
    |||||    
T  15409610 tcttt 15409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 14831812 - 14831879
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||||| |||||||||| |||  |||||||||||||| |||| |||||||||||||||||||||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgaca 14831879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 18520979 - 18520880
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 16327906 - 16327966
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||||| ||||| || |||||||||||||| | ||||||||||||||||||||||||||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgaca 16327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 40145403 - 40145511
Alignment:
Q  102 atatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatac 201  Q
    |||||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||| |||||||||||| || | ||  |||||||||| |||| | ||    
T  40145403 atatgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 40145502  T
Q  202 tttctcttt 210  Q
    |||||||||    
T  40145503 tttctcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 42414404 - 42414298
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||    |||||||||||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | ||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 42414305  T
Q  204 tctcttt 210  Q
    | |||||    
T  42414304 tatcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 33825424 - 33825359
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| ||||| |||| |||| |||||||||||||| || | |||||||||||||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgaca 33825359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  110 tatgatacataaacatacttaggtggcaatata-cccattgacacccacataaaaatctga 169  Q
    ||||||||||| |||| |||||||||||||| | |||||||||||||||| ||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 36733042 - 36732938
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||||| |||||| |||| |||||||||||| ||||||||||||  | | ||  |||||||||| |||| | ||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  206 tcttt 210  Q
    |||||    
T  36732942 tcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 33149741 - 33149634
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||| ||||| || | ||  |||| ||||| |||| | |||    
T  33149741 tatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 33149642  T
Q  203 ttctcttt 210  Q
    ||||||||    
T  33149641 ttctcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 35785198 - 35785264
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    ||||| |||||||||| |||  |||||||||||||| |||  |||||||||||| ||||||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 35785264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 35943992 - 35943927
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    ||||||||||||||| |||  |||||||||||||| | |  |||||||||||| ||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgaca 35943927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 13811659 - 13811755
Alignment:
Q  113 gatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctt 209  Q
    |||||||| |||  |||||||||||||| | |  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 9603813 - 9603896
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacccc 189  Q
    |||| |||||||||| |||| ||||||||  |||| || |||| ||||| ||| ||||||||||||  ||| ||||||||||||    
T  9603813 gagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggacccc 9603896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 31008988 - 31009099
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||||||| ||||| |  | |  ||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 31009087  T
Q  206 tctttcttcttc 217  Q
    | |||| |||||    
T  31009088 tatttcctcttc 31009099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaat 165  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 15508125 - 15508013
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  205 ctctttcttcttc 217  Q
    |||||||||||||    
T  15508025 ctctttcttcttc 15508013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 15990142 - 15990031
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  15990042 tctttcttcttc 15990031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 30341460 - 30341349
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  30341360 tctttcttcttc 30341349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 4231547 - 4231659
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||||||||| |||||||||  ||||||||||||| |||| ||| |||||||| |||||||||||| ||||||||||||||||||| |||||| |||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacacttt 4231646  T
Q  205 ctctttcttcttc 217  Q
    |||||||||||||    
T  4231647 ctctttcttcttc 4231659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 31976248 - 31976352
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| ||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||| ||||||| |||| | ||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  206 tcttt 210  Q
    |||||    
T  31976348 tcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 31953132 - 31953019
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||| ||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||  ||| |||||| | | |||  | ||||    
T  31953132 atgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactt 31953033  T
Q  204 tctctttcttcttc 217  Q
    |||||||| |||||    
T  31953032 tctctttcatcttc 31953019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 32869675 - 32869782
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||| | |||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||    
T  32869675 tatgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 32869774  T
Q  203 ttctcttt 210  Q
    ||||||||    
T  32869775 ttctcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 31110859 - 31110757
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| |||||||||||||| |||| ||||||| |||  |||||||||||| ||  ||| |||||||| || |||| | ||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  206 tcttt 210  Q
    |||||    
T  31110761 tcttt 31110757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 28536581 - 28536521
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    ||||||||||||||| |||||||||||||| | || |||||||||||| ||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca 28536521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 12732482 - 12732553
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggc 177  Q
    |||| |||||||||| |||| |||| |||||||||||  |||||||||||||| |||||||||||| |||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggc 12732553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 22880753 - 22880654
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| |||| ||||||| || | ||  |||||||||| |||| | |||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 17598552 - 17598658
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||  |||||||||||||| | |  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactt 17598651  T
Q  204 tctcttt 210  Q
    |||||||    
T  17598652 tctcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 11427639 - 11427722
Alignment:
Q  127 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||||||| | || |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | |||||||||||    
T  11427639 cttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 31109479 - 31109396
Alignment:
Q  127 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||||||| |||| |||||| ||||| |||||||||||| || | ||  | ||||||||  ||||| |||||||||||    
T  31109479 cttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttt 31109396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 30870058 - 30870119
Alignment:
Q  150 acacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttc 211  Q
    ||||||| |||||||||| |||||||| || ||||||||||| |||| | | ||||||||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttc 30870119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 45058653 - 45058542
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatacttt 45058555  T
Q  205 ctctttcttcttc 217  Q
    |||||||||||||    
T  45058554 ctctttcttcttc 45058542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 36331407 - 36331318
Alignment:
Q  128 ttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttc 217  Q
    ||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttc 36331318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 42823104 - 42823218
Alignment:
Q  99 attatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagta 198  Q
    |||||| || ||||||||||||||||   ||| |||| |||| |||| |||||||||||| |||||| |||||||||| ||||||||||||||  |||||    
T  42823104 attataggaattatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagta 42823203  T
Q  199 tactttctctttctt 213  Q
    |||||||||||||||    
T  42823204 tactttctctttctt 42823218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 41189864 - 41189760
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| |||||||||||||| | |  ||||||||||||||||||| ||||| ||||||| ||||||||||| |||| | ||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  206 tcttt 210  Q
    |||||    
T  41189764 tcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 14623939 - 14623828
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||  ||| |||||| | | |||| | ||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  206 tctttcttcttc 217  Q
    |||||| |||||    
T  14623839 tctttcatcttc 14623828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 26141635 - 26141528
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    |||||||||||||||||| |||| |||||||||||||| |||| || ||||||||| |||||||||||| |||| || ||||||||| | |||| | |||    
T  26141635 tatgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacact 26141536  T
Q  203 ttctcttt 210  Q
    ||||||||    
T  26141535 ttctcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 13898150 - 13898044
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||| |||||||| |||||||||||||| |||| ||||||||||||||||||||||||| |||  ||| |||||| | | |||| | |||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T
Q  211 cttcttc 217  Q
    | |||||    
T  13898050 catcttc 13898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 53982006 - 53982115
Alignment:
Q  101 tatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtata 200  Q
    ||||||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |    
T  53982006 tatatgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T
Q  201 ctttctcttt 210  Q
    ||||||||||    
T  53982106 ctttctcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 20765016 - 20764911
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    |||||||||| ||||| |||| ||||||||| |||| || | || ||||||||| |||||||||||| ||||||| ||||||||||  |||| | |||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  205 ctcttt 210  Q
    ||||||    
T  20764916 ctcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 11348022 - 11347918
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| |||||||| ||||| | || |||||| ||||| |||||||||||| ||||||| |||||||| ||  ||| | ||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  206 tcttt 210  Q
    |||||    
T  11347922 tcttt 11347918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| ||||| |||||||| |||  || ||| ||||| || ||||||||| ||||||||||| ||||||| |||| | ||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  206 tcttt 210  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 51419460 - 51419356
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| ||||| || ||||| | || || ||||||||| |||||||||||| ||||||| || |||||||| |||| | ||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  206 tcttt 210  Q
    |||||    
T  51419360 tcttt 51419356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 26754698 - 26754800
Alignment:
Q  109 ttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctct 208  Q
    ||||||| |||| |||  |||||||||||||| |||| | |||| ||||| ||||||||||||||||| || ||||||||||| |||| | | |||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  209 ttc 211  Q
    |||    
T  26754798 ttc 26754800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 8076393 - 8076498
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| ||||||||||||||  ||||||||||| || |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | ||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  206 tctttc 211  Q
    ||||||    
T  8076493 tctttc 8076498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 33644199 - 33644304
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| |||  ||| |||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  205 ctcttt 210  Q
    ||||||    
T  33644299 ctcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 11907371 - 11907475
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||  |||||||| ||||| || | |  |||| |||| ||||||||||||||||| |||||||||||||| |||| | | ||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  206 tcttt 210  Q
    |||||    
T  11907471 tcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 52629304 - 52629404
Alignment:
Q  110 tatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctt 209  Q
    ||||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  210 t 210  Q
    |    
T  52629404 t 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 27714991 - 27714888
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||   |||||||| |||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | ||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  206 tctt 209  Q
    ||||    
T  27714891 tctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 210
Target Start/End: Original strand, 31456694 - 31456793
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| |||  | |||| ||||||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | |||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 48587170 - 48587087
Alignment:
Q  127 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||||||| |||| |||||||| |||||||||||||||| || | ||  |||| ||||| |||||| |||||||||||    
T  48587170 cttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 24700054 - 24699972
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccc 188  Q
    |||| |||||||||| |||| ||||| |||||||| |||  |||||||||||||||||||||| || |||||||  |||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccc 24699972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 11095453 - 11095388
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 11095388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 35536626 - 35536707
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacc 187  Q
    |||| |||||||||| |||| |||| ||||||||| |||  ||||||||||||||||||| ||||| |||| ||| ||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggacc 35536707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 49607414 - 49607479
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 49607479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 25395429 - 25395350
Alignment:
Q  110 tatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacccc 189  Q
    |||||||||||||||| |||| ||||| ||| | || || | ||||||| |||||||||||||||||| |||| ||||||    
T  25395429 tatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagacccc 25395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 36331478 - 36331408
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 176  Q
    |||||||||||||||||||  ||||| |||||||  |||| |||||| ||||| ||||||||| |||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtgg 36331408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 8956762 - 8956827
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| |||| |||| ||||||||| | || ||||||||||||||||||| |||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgaca 8956827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 33118951 - 33118886
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    ||||||||||||||| |||  |||||||| ||||| |||| |||||||||||| |||||| |||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgaca 33118886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 54868995 - 54868930
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| |||  |||||||||||||| |||  |||||||||||| ||||||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 54868930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 30801828 - 30801728
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| |||  ||||||||  |||| |||| |||| ||||||| |||||| |||||||| | |||||||||||| | |||| | | |||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T
Q  211 c 211  Q
    |    
T  30801728 c 30801728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 35965874 - 35965804
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 176  Q
    |||| |||||||||| |||| |||| |||  |||| | || ||||||||||||||||||||||||| ||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgg 35965804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 25407243 - 25407142
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccaca-taaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctt 209  Q
    |||||||||| |||  | ||||||||||||||||| ||||||| ||||  |||||||||||| |||  |||||||| ||| | |||  | ||||||||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctt 25407144  T
Q  210 tc 211  Q
    ||    
T  25407143 tc 25407142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 17470405 - 17470509
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||   ||||||||||||| |||  || ||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  206 tcttt 210  Q
    |||||    
T  17470505 tcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 50591101 - 50590989
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  205 ctctttcttcttc 217  Q
    |||||||||||||    
T  50591001 ctctttcttcttc 50590989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 41608594 - 41608482
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||  |||||| |||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  205 ctctttcttcttc 217  Q
    |||||||||||||    
T  41608494 ctctttcttcttc 41608482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 47748441 - 47748553
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    ||||||||||||||||||| |  |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactt 47748539  T
Q  204 tctctttcttcttc 217  Q
    ||||||||||||||    
T  47748540 tctctttcttcttc 47748553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 5959100 - 5958989
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||| ||||||||| |||  |||||||||||| ||||||||||||||||| |||||||||||||| |||||| ||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  5959000 tctttcttcttc 5958989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 44332430 - 44332360
Alignment:
Q  147 ttgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttc 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  44332430 ttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatactttctctttcttcttc 44332360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 32813247 - 32813351
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| |||||||||||||| |||| || ||||||||| |||||||||||| |||| || ||||||||||| |||| | ||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  206 tcttt 210  Q
    |||||    
T  32813347 tcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| ||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  206 tcttt 210  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 37926538 - 37926434
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| | ||  ||||||||||||| | |  || |||||||||||||||||||||| ||||||| ||||| ||||  |||||| ||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  206 tcttt 210  Q
    |||||    
T  37926438 tcttt 37926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 27564838 - 27564731
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||| |||||||||| |||| |||||||||||||| |||  |||||||||||| |||||||||||| ||   ||  |||||||||| |||| | |||    
T  27564838 tatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 27564739  T
Q  203 ttctcttt 210  Q
    ||||||||    
T  27564738 ttctcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 9474977 - 9474872
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||  | |||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  205 ctcttt 210  Q
    ||||||    
T  9474877 ctcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 45044660 - 45044575
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgc 191  Q
    ||||||||||||||| |  | |||||||||||||| |||  |||||||||| | ||||||||||||||| |||| |||||||||||    
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgc 45044575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 49811632 - 49811523
Alignment:
Q  101 tatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtata 200  Q
    |||| ||||||||||| ||| |||| |||||||| ||||| |||  |||||| ||||| |||||||||||| || ||||||| ||| |||| |||| | |    
T  49811632 tataagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T
Q  201 ctttctcttt 210  Q
    ||||||||||    
T  49811532 ctttctcttt 49811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 2581915 - 2582015
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  206 t 206  Q
    |    
T  2582015 t 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 38595154 - 38595258
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| ||||||||||||||   ||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  206 tcttt 210  Q
    |||||    
T  38595254 tcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 26440727 - 26440838
Alignment:
Q  99 attatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagta 198  Q
    |||| |||||||| |||| ||| |||| ||||| || ||||| |||| || ||||||||| |||||||||||| ||||||| ||||| |||||  ||| |    
T  26440727 attaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagca 26440826  T
Q  199 tactttctcttt 210  Q
     |||||||||||    
T  26440827 cactttctcttt 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 23597191 - 23597118
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggcca 179  Q
    |||| |||||||||| ||||  ||||||||||||| || | |||| |||||||||||||||||||| |||||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggcca 23597118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 51898783 - 51898718
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| ||||  ||||||||||||| |||| |||||||||||| ||||||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgaca 51898718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 37649196 - 37649268
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 176  Q
    |||||| |||||||||| ||||  ||||||||||||| || | |||||||||||| |||||||||||| ||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtgg 37649268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 6260868 - 6260955
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgc 191  Q
    ||||||||||||| ||| | || ||||||||| |||| |||| |  |||||||||||||||||| |||||||| ||  ||||||||||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgc 6260955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 44548471 - 44548372
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| ||||  ||||||||||||| |||  |||| ||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 3302636 - 3302550
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacccc 189  Q
    ||||||| |||||||||| |||| |||||||| |||||||  | | |||||||||| |||||||||||| ||   ||||||||||||    
T  3302636 tatgagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggacccc 3302550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 47452422 - 47452316
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||||| ||| || | ||  |||| ||||| |||| | ||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactt 47452323  T
Q  204 tctcttt 210  Q
    |||||||    
T  47452322 tctcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 7740733 - 7740838
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||  |||  |||| ||| ||||| | ||||||||||| |||||||||| ||||| ||||| || |||||||| | ||| |||| ||||    
T  7740733 gagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaaatatattttc 7740832  T
Q  206 tctttc 211  Q
    | ||||    
T  7740833 tttttc 7740838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 48716383 - 48716278
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| |||  |||||||||||||| |||  |||||| ||||| |||||||||||| || | ||  |||||||||| |||| | |||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T
Q  205 ctcttt 210  Q
     |||||    
T  48716283 atcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 8346466 - 8346384
Alignment:
Q  128 ttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    ||||||||||||| |||  |||||||||||| |||||||||||| || | ||  ||||||| || |||| | |||||||||||    
T  8346466 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 41758832 - 41758909
Alignment:
Q  133 tggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||| |||| |||||| ||||| |||||||||||| || | || ||||||||||| |||  | |||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttt 41758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||| | ||||| | || |||||||||||| |||||||||||| || | ||  ||||| |||| |||| | ||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  206 tcttt 210  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 38632421 - 38632317
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||  || ||| ||||| |||||||||||| || | ||  |||||||||| |||| | |||||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  206 tcttt 210  Q
    |||||    
T  38632321 tcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 50630458 - 50630562
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| | |  |||||||||||||| | || |||  ||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  206 tcttt 210  Q
    |||||    
T  50630558 tcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 8343263 - 8343152
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  8343163 tctttcttcttc 8343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 19670816 - 19670705
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  19670716 tctttcttcttc 19670705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 55475191 - 55475302
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||  ||||| ||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttc 55475290  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  55475291 tctttcttcttc 55475302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 32766958 - 32767069
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||||||||| || |||||| ||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttc 32767057  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  32767058 tctttcttcttc 32767069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 29548059 - 29547948
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||||||||||||| | || |||||||||||| |||||||||||||||||||||||||| |||||  ||||| |||||     
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttt 29547960  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  29547959 tctttcttcttc 29547948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 47986208 - 47986315
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| | || |||||| ||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  206 tctttctt 213  Q
    ||||||||    
T  47986308 tctttctt 47986315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 50813992 - 50813881
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  ||||||||| |||| |||| |||||||||||| ||||||||||||||||| |||||| ||||||| |||||| ||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  50813892 tctttcttcttc 50813881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 17983822 - 17983732
Alignment:
Q  127 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttc 217  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17983822 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttc 17983732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 55079814 - 55079702
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatgga-ccccgcgcaagtatacttt 204  Q
    |||||||||||||||||||  |||||||||||||| |||  |||||||||| | |||||||||||||||||||||||||| |||| | |||||| |||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  205 ctctttcttcttc 217  Q
    |||||||||||||    
T  55079714 ctctttcttcttc 55079702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 18924598 - 18924484
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||||||||| |||||| |  |||||||||||||| |||| |||| | ||||| |||||||||||||||||| ||||| || |||| |||||| |||    
T  18924598 tatgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacact 18924499  T
Q  203 ttctctttcttcttc 217  Q
    |||||||||||||||    
T  18924498 ttctctttcttcttc 18924484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 29589831 - 29589729
Alignment:
Q  114 atacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttctt 213  Q
    |||||||||||  ||||| || ||||| |||| |||||||||||| |||||||||| ||||||||||||||||||| | |||||| ||||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttctt 29589733  T
Q  214 cttc 217  Q
    ||||    
T  29589732 cttc 29589729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 44536845 - 44536735
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||   ||||||||||||| |||| |||||| ||||| ||||||||||||||||| ||||| |||||| |  ||||| ||||||    
T  44536845 gagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttc 44536747  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  44536746 tctttcttcttc 44536735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 11511563 - 11511458
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| |||  |||||||||||||| |||| ||||||||||||||||||||||||| || | ||  |||||||||| |||| | |||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  205 ctcttt 210  Q
    ||||||    
T  11511463 ctcttt 11511458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 31910191 - 31910296
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    |||||||||||||||| |||| |||||||| ||||| || | |||||||||||| ||||||||||||  | |||| ||||||||||| |||| | |||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  205 ctcttt 210  Q
    ||||||    
T  31910291 ctcttt 31910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 50052528 - 50052423
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  206 tctttc 211  Q
    ||||||    
T  50052428 tctttc 50052423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 6034043 - 6034148
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||||||||||| | ||  |||| ||||| |||| | |||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  205 ctcttt 210  Q
    ||||||    
T  6034143 ctcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 40574777 - 40574844
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    ||||||||||||||||| |||| ||||||||| |||| |||| |||||||||||| ||||||||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 48183154 - 48183045
Alignment:
Q  101 tatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtata 200  Q
    |||| |||| |||||||||| |||  |||| ||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |    
T  48183154 tataagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T
Q  201 ctttctcttt 210  Q
    ||||||||||    
T  48183054 ctttctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 29977908 - 29977996
Alignment:
Q  129 taggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttc 217  Q
    |||||||||||| |||| || ||||||||| |||||||||||| || | |||||||||||| | |||| | |||||||||||| |||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctctttcatcttc 29977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 50526272 - 50526201
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 176  Q
    ||||| |||||||||| ||||  ||||||||||||| |||| |||||||||||| |||||||||||| ||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtgg 50526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 480547 - 480443
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||| ||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  206 tcttt 210  Q
    |||||    
T  480447 tcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||  |||||| ||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  206 tcttt 210  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 48647826 - 48647721
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||| |||||||||| |||||||  ||||| |||  || |||||||||||||||||| ||| |||| ||  ||||| |||| |||| | | ||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  206 tctttc 211  Q
    ||||||    
T  48647726 tctttc 48647721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 42044467 - 42044363
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| | || |  ||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  206 tcttt 210  Q
    |||||    
T  42044367 tcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 3481652 - 3481719
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||||| |||||||||| |||   ||||||||||||| || | |||||||||||| ||||||||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgaca 3481719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 24995186 - 24995103
Alignment:
Q  127 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||| || | ||  |||||||||| |||| | | |||||||||    
T  24995186 cttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 29239886 - 29239991
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||  |||||| ||||| |||||||| ||| || | ||  |||||||| | |||| | ||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  206 tctttc 211  Q
    ||||||    
T  29239986 tctttc 29239991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 54473634 - 54473529
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| |||  |||||||| ||||| |||  |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | |||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T
Q  205 ctcttt 210  Q
     |||||    
T  54473534 atcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 29234345 - 29234241
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||| |||||||| |||| |||| |||  || |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  206 tcttt 210  Q
    |||||    
T  29234245 tcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 41823926 - 41823986
Alignment:
Q  150 acacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    ||||||||| |||||||||||| || | || ||||||||||| |||| | |||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttt 41823986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 32564527 - 32564415
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacacttt 32564428  T
Q  205 ctctttcttcttc 217  Q
    |||||||||||||    
T  32564427 ctctttcttcttc 32564415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 22343361 - 22343472
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  22343461 tctttcttcttc 22343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 41915741 - 41915852
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  41915841 tctttcttcttc 41915852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 38044197 - 38044308
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||| ||||| ||||||||||||||| |||||||||||||||| |||||| ||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  38044297 tctttcttcttc 38044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 8238210 - 8238324
Alignment:
Q  104 atgagttatgatacataaacatact-taggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    |||||||||||||||||||||  || |||||||||||| |||| |||||||||||| ||||||||||||||| | |||||||||||||| |||||| |||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  203 ttctctttcttcttc 217  Q
    |||||||||||||||    
T  8238310 ttctctttcttcttc 8238324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 7727906 - 7728017
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  ||||||||| |||| |||  ||||||  |||||||||||||||||||||| |||||||||||||| |||||| ||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  206 tctttcttcttc 217  Q
    | ||||||||||    
T  7728006 tgtttcttcttc 7728017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 40846213 - 40846102
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||| ||||| |||||||| |||||| |  ||||||||||||| ||| || ||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  40846113 tctttcttcttc 40846102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 26296644 - 26296734
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 196  Q
    ||||||||||||||| |||| |||||||| |||||||||| || ||| |||||||||||||||| | ||||||||||||||||||| ||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaag 26296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 35522877 - 35522980
Alignment:
Q  107 agttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttct 206  Q
    |||||||||||||| |||| |||| ||||||||| |||  || ||||||||| |||||||||||| ||||||||||||| ||||| |||| | |||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  207 cttt 210  Q
    ||||    
T  35522977 cttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 46374902 - 46374812
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 196  Q
    ||||||||||||||| |||| |||||||||||| | |||| || ||||||||| |||||||||||| ||||||| ||||||||||| ||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaag 46374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 46033901 - 46033797
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| | || |||||||||||||| |||| || |||||||||||||||||||||| |||| || ||| || |||| |||| ||| ||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  206 tcttt 210  Q
    |||||    
T  46033801 tcttt 46033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 8080483 - 8080379
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||| |||||||||||||||| || | ||  |||||||||| |||| | ||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  206 tcttt 210  Q
    |||||    
T  8080383 tcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 19329840 - 19329946
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||| |||||||||||||| |||  |||||||||||| |||||||||||| ||   ||  |||||||||| |||| | ||||    
T  19329840 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactt 19329939  T
Q  204 tctcttt 210  Q
    |||||||    
T  19329940 tctcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 21234399 - 21234504
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    ||||||||||||||||| |||| |||||||| ||||| |||| ||||||| |||| |||||| ||||| || |||| ||| ||||||| |||| | | ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  204 tctctt 209  Q
    ||||||    
T  21234499 tctctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 3434562 - 3434666
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||| ||||| |||||| || | ||  |||| ||||| |||| | ||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  206 tcttt 210  Q
    |||||    
T  3434662 tcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 7389389 - 7389493
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| || | |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  206 tcttt 210  Q
    |||||    
T  7389489 tcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 35468955 - 35468850
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| ||||| |||||||| | |  ||||||||||||||||||||| | ||||| |||| ||||||| || |||  | ||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttc 35468856  T
Q  206 tctttc 211  Q
    ||||||    
T  35468855 tctttc 35468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 36208173 - 36208278
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||  ||||||||| |||| |  |||||||||||||| ||||| ||||||||||| ||  ||||||| || |||| | | ||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  206 tctttc 211  Q
    ||||||    
T  36208273 tctttc 36208278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 38267039 - 38267144
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 204  Q
    ||||| |||||||||| |||  |||| ||| ||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  205 ctcttt 210  Q
    ||||||    
T  38267139 ctcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 36362013 - 36361909
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| | || |||||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  206 tcttt 210  Q
    |||||    
T  36361913 tcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 35137531 - 35137637
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||| ||| |||  |||||||||||||| |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||  | ||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactt 35137630  T
Q  204 tctcttt 210  Q
    |||||||    
T  35137631 tctcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 19436287 - 19436222
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| |||| |||||||| ||||| |||  |||||||||||| ||||||||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgaca 19436222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 36362026 - 36362130
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||||||| |||| | || |||||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  206 tcttt 210  Q
    |||||    
T  36362126 tcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 38837217 - 38837321
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||| |  ||||| ||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  206 tcttt 210  Q
    |||||    
T  38837317 tcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 39256024 - 39255952
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggc 177  Q
    |||||||||||||||| |||  |||||||||||||| |||  |||| ||||| | |||||||||||| |||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtggc 39255952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 210
Target Start/End: Original strand, 3784000 - 3784099
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| |||  |||||||||||||| | |  |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | |||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 18207180 - 18207251
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggc 177  Q
    ||||||||||||||| |||  |||||||||||||| |||  |||||||||| | |||||||| ||| |||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtggc 18207251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 31735882 - 31735936
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccaca 158  Q
    ||||||||||||||||| |||| |||||||||||||| || | || |||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccaca 31735936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 32045842 - 32045920
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacccc 189  Q
    |||||||||| | || ||||||||||||||||    | ||||||||||||||||||||||| ||  |||||| ||||||    
T  32045842 atgatacatatatattcttaggtggcaatatattactggacacccacataaaaatctgacacgtaaccatatagacccc 32045920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 40957707 - 40957772
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| |||  |||||||||||||| || | |||| ||||||| ||||||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgaca 40957772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 2318338 - 2318238
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    ||||||||| ||||  | |||||||||| | |||  |||||||||||| ||||||||||| ||||| ||  |||||||  |  ||| |||||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T
Q  211 c 211  Q
    |    
T  2318238 c 2318238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 4999614 - 4999510
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||| |||||||| |||  |||||||||||| |||||||||| | || | ||  |||||||||| |||  | ||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  206 tcttt 210  Q
    |||||    
T  4999514 tcttt 4999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 45097835 - 45097724
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||| |||||||||||||| | || |||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 45097736  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  45097735 tctttcttcttc 45097724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 43490119 - 43490232
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||||||||||||||||||  |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 43490218  T
Q  204 tctctttcttcttc 217  Q
    | ||||||||||||    
T  43490219 tatctttcttcttc 43490232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 13365351 - 13365464
Alignment:
Q  106 gagttatgatacataaacatac--ttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    ||||||||||||||||||| ||  |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||    
T  13365351 gagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactt 13365450  T
Q  204 tctctttcttcttc 217  Q
    ||||||||||||||    
T  13365451 tctctttcttcttc 13365464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 2997566 - 2997476
Alignment:
Q  127 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttc 217  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  2997566 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttc 2997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 38732354 - 38732465
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||||||  |||| ||| ||||| | || |||||||||||| ||||||||||||||||| |||||||||||||| |||||| ||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  206 tctttcttcttc 217  Q
    ||||||||||||    
T  38732454 tctttcttcttc 38732465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 40614004 - 40613898
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    ||||||||||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||||||| |||| | ||||    
T  40614004 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactt 40613905  T
Q  204 tctcttt 210  Q
    |||||||    
T  40613904 tctcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 42257193 - 42257297
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| ||||  ||||||||||||| | |  ||||||||||||||||||||||||| ||||||| ||||||||||| |||| | ||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  206 tcttt 210  Q
    |||||    
T  42257293 tcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 3035029 - 3034972
Alignment:
Q  160 aaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttc 217  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3035029 aaaaatctgacatgtggtcatatggaccccgcacaagtatactttctctttcttcttc 3034972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 210
Target Start/End: Complemental strand, 38273251 - 38273138
Alignment:
Q  97 aaattatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 196  Q
    |||||| | ||||||||||||||| |||| ||||| |||||||| |||| || ||||||||| |||||||||||| || |||| ||||||||||| | ||    
T  38273251 aaattaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactag 38273152  T
Q  197 tatactttctcttt 210  Q
     | |||||||||||    
T  38273151 cacactttctcttt 38273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 9058480 - 9058584
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | ||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  206 tcttt 210  Q
    |||||    
T  9058580 tcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 5574588 - 5574484
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||| ||||||||||||||||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  206 tcttt 210  Q
    |||||    
T  5574488 tcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 36168836 - 36168940
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| ||||| || ||||| | || || || |||||| |||||| ||||| ||||||| ||||||||||| |||| ||||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  206 tcttt 210  Q
    |||||    
T  36168936 tcttt 36168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 210
Target Start/End: Original strand, 28863460 - 28863559
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 15428840 - 15428766
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccat 180  Q
    |||||||||||||||||||| |||| ||||| ||| |||| || |||| |||| |||||||||||||||||||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccat 15428766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 33436200 - 33436095
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | ||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  206 tctttc 211  Q
    ||||||    
T  33436100 tctttc 33436095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 33436211 - 33436316
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| ||||| |||||||| |||  ||||||||||||||||||||||||| ||| |||| |||||   || |||| | ||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttc 33436310  T
Q  206 tctttc 211  Q
    ||||||    
T  33436311 tctttc 33436316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 17820105 - 17820034
Alignment:
Q  105 tgagttatgatacataaacatact-taggtggcaatatacccattgacacccacataaaaatctgacatgtgg 176  Q
    |||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  17820105 tgagttatgatacatagaca-actataggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 17820034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 30915463 - 30915567
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||||||||| |||| ||||| ||||||||||||||||||| || | ||  |||||||||  |||| | ||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  206 tcttt 210  Q
    |||||    
T  30915563 tcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 19930915 - 19930816
Alignment:
Q  111 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 210  Q
    |||||||||| |||  |||||||||||||| |||| |||||| ||||| |||||||||||| || | ||| |||||||||| |||  | |||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 26891604 - 26891493
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||||||||||||||  ||  |||||||||||||| |||| | |||||||||| ||||||||||||||||| ||  |||||| ||  |||| | | ||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  206 tctttcttcttc 217  Q
    |||||| |||||    
T  26891504 tctttcctcttc 26891493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 28381758 - 28381651
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||| |||||||||| |||  |||||||||||||| |||  | |||||||||| |||||||||||| || | || |||||| |||| |||| | |||    
T  28381758 tatgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacact 28381659  T
Q  203 ttctcttt 210  Q
    ||||||||    
T  28381658 ttctcttt 28381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 13438341 - 13438447
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||  |||||||| ||||| | || |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13438440  T
Q  204 tctcttt 210  Q
    |||||||    
T  13438441 tctcttt 13438447  T

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Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 2533124 - 2533227
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    ||||||||||||||| |||| |||| ||||||||| | || |||||| ||||| |||||||||||| || |||| || |||||||| |||| | |||||     
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  206 tcttt 210  Q
    |||||    
T  2533223 tcttt 2533227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 7465835 - 7465731
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||| |||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  206 tcttt 210  Q
    |||||    
T  7465735 tcttt 7465731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 10249482 - 10249378
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||| ||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  206 tcttt 210  Q
    |||||    
T  10249382 tcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  ||||| |||||||| |||| |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  206 tcttt 210  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 40701477 - 40701543
Alignment:
Q  105 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    ||||| |||||||||| |||  |||||||||||||| |||  |||||||||||| ||||||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 40701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 20700815 - 20700920
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||| |||| ||||||||| |||| ||||| || ||| |||||||||||| || | ||  ||||||||||  ||| | ||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  206 tctttc 211  Q
    ||||||    
T  20700915 tctttc 20700920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 27864702 - 27864810
Alignment:
Q  104 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 203  Q
    |||||| |||||||||| |||  |||| ||||||||| |||| |||||| ||||| |||||||||||| ||   ||  ||||||||||  ||| | ||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactt 27864801  T
Q  204 tctctttct 212  Q
    |||||||||    
T  27864802 tctctttct 27864810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 32505748 - 32505648
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 205  Q
    |||| |||||||||| |||  |||||||| ||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  206 t 206  Q
    |    
T  32505648 t 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 3737986 - 3738033
Alignment:
Q  149 gacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 196  Q
    |||||||||| ||||||||||||||||| ||| |||||||||| ||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaag 3738033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 38882913 - 38882849
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||| ||||| ||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgaca 38882849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 152523 - 152609
Alignment:
Q  131 ggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttc 217  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||| |||||||| ||||| ||| || ||||||||||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttc 152609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 17055 - 17170
Alignment:
Q  103 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 202  Q
    ||||||||||||| |||| |||||    ||| |||||| | || | |||| ||||| ||||||||||||||||| || ||||||||||| |||| | | |    
T  17055 tatgagttatgattcatagacata----ggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacatt 17150  T
Q  203 ttctctttcttcttcgctct 222  Q
    ||||||||| ||||| ||||    
T  17151 ttctctttcctcttctctct 17170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 10209 - 10144
Alignment:
Q  106 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 171  Q
    ||||||||||||||| |||   ||||||||||||| | || |||||| ||||||||||||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgaca 10144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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