View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20761_high_1 (Length: 878)

Name: NF20761_high_1
Description: NF20761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20761_high_1
NF20761_high_1
[»] chr7 (15 HSPs)
chr7 (18-585)||(26562683-26563249)
chr7 (784-876)||(26562586-26562678)
chr7 (154-405)||(34889866-34890116)
chr7 (247-376)||(12163675-12163804)
chr7 (284-375)||(2226618-2226710)
chr7 (317-368)||(5925533-5925584)
chr7 (317-376)||(13292181-13292240)
chr7 (317-368)||(21161224-21161274)
chr7 (325-368)||(7486527-7486570)
chr7 (317-376)||(9135419-9135478)
chr7 (325-376)||(12644759-12644810)
chr7 (317-368)||(26762969-26763020)
chr7 (317-360)||(27803358-27803401)
chr7 (271-341)||(9885710-9885780)
chr7 (317-375)||(39879362-39879420)
[»] chr3 (15 HSPs)
chr3 (151-354)||(5528268-5528471)
chr3 (241-356)||(27158266-27158381)
chr3 (253-368)||(35314118-35314231)
chr3 (293-376)||(1475723-1475806)
chr3 (253-350)||(10896103-10896200)
chr3 (151-350)||(8868367-8868566)
chr3 (320-376)||(12516159-12516215)
chr3 (325-376)||(2311900-2311951)
chr3 (317-360)||(8122972-8123015)
chr3 (317-362)||(9007834-9007879)
chr3 (304-376)||(7743393-7743465)
chr3 (317-368)||(17485682-17485733)
chr3 (317-368)||(21649395-21649446)
chr3 (254-341)||(25410406-25410492)
chr3 (29-118)||(10896326-10896416)
[»] chr4 (12 HSPs)
chr4 (202-344)||(53402496-53402638)
chr4 (166-444)||(5321859-5322137)
chr4 (154-322)||(4826199-4826372)
chr4 (320-368)||(12683767-12683815)
chr4 (317-364)||(14602073-14602120)
chr4 (317-368)||(15514619-15514670)
chr4 (289-344)||(53618794-53618849)
chr4 (319-376)||(3981924-3981981)
chr4 (317-364)||(13171065-13171112)
chr4 (317-376)||(15742211-15742270)
chr4 (253-359)||(43543289-43543395)
chr4 (317-366)||(5518524-5518573)
[»] chr2 (20 HSPs)
chr2 (154-375)||(40800099-40800319)
chr2 (151-356)||(17560757-17560963)
chr2 (252-369)||(41501066-41501183)
chr2 (304-376)||(17671947-17672019)
chr2 (284-370)||(12634826-12634913)
chr2 (304-376)||(17626875-17626947)
chr2 (317-376)||(45714969-45715028)
chr2 (317-375)||(20120322-20120380)
chr2 (317-377)||(12127721-12127781)
chr2 (324-368)||(12168954-12168998)
chr2 (267-347)||(13779107-13779187)
chr2 (169-351)||(36069296-36069479)
chr2 (318-368)||(29711000-29711050)
chr2 (333-369)||(15825135-15825171)
chr2 (320-368)||(45258213-45258261)
chr2 (317-356)||(26713593-26713632)
chr2 (189-323)||(41969382-41969516)
chr2 (318-368)||(29137883-29137933)
chr2 (317-362)||(27846577-27846622)
chr2 (331-368)||(28426194-28426231)
[»] chr6 (11 HSPs)
chr6 (213-432)||(11714090-11714309)
chr6 (158-228)||(33189595-33189665)
chr6 (253-377)||(33189435-33189559)
chr6 (317-376)||(12449641-12449700)
chr6 (317-368)||(30680974-30681025)
chr6 (317-368)||(34187281-34187332)
chr6 (317-368)||(9292077-9292128)
chr6 (317-368)||(19331738-19331789)
chr6 (333-367)||(12424388-12424422)
chr6 (317-367)||(16343562-16343612)
chr6 (317-366)||(22497356-22497405)
[»] chr1 (21 HSPs)
chr1 (166-347)||(39003157-39003342)
chr1 (246-365)||(1485362-1485481)
chr1 (317-368)||(26977722-26977773)
chr1 (154-307)||(5696723-5696875)
chr1 (317-368)||(4601545-4601596)
chr1 (301-366)||(30732501-30732566)
chr1 (317-375)||(2141002-2141060)
chr1 (318-376)||(14255089-14255147)
chr1 (318-360)||(16050384-16050426)
chr1 (304-376)||(8018923-8018995)
chr1 (318-366)||(16522759-16522807)
chr1 (320-368)||(18246125-18246173)
chr1 (317-376)||(16030369-16030428)
chr1 (317-368)||(21098903-21098954)
chr1 (317-368)||(22414757-22414808)
chr1 (317-368)||(25408078-25408129)
chr1 (318-368)||(1659848-1659898)
chr1 (327-376)||(5459776-5459825)
chr1 (319-360)||(33101567-33101608)
chr1 (331-368)||(46016097-46016133)
chr1 (317-366)||(52565564-52565613)
[»] scaffold0022 (1 HSPs)
scaffold0022 (284-368)||(69248-69333)
[»] chr5 (9 HSPs)
chr5 (318-368)||(26348138-26348188)
chr5 (317-376)||(24546321-24546379)
chr5 (163-368)||(34443268-34443473)
chr5 (325-368)||(25537387-25537430)
chr5 (317-369)||(18803899-18803951)
chr5 (325-376)||(16621182-16621233)
chr5 (317-364)||(27083295-27083342)
chr5 (316-366)||(26163619-26163669)
chr5 (174-219)||(17249417-17249462)
[»] scaffold0013 (1 HSPs)
scaffold0013 (318-369)||(4483-4534)
[»] chr8 (14 HSPs)
chr8 (317-368)||(23269228-23269279)
chr8 (174-223)||(15663498-15663547)
chr8 (317-369)||(17927762-17927814)
chr8 (301-376)||(22454275-22454350)
chr8 (331-368)||(4565465-4565502)
chr8 (246-347)||(8599882-8599982)
chr8 (317-362)||(30477629-30477674)
chr8 (715-751)||(3222360-3222396)
chr8 (326-369)||(15058016-15058059)
chr8 (324-367)||(23497200-23497243)
chr8 (318-368)||(14666898-14666948)
chr8 (326-368)||(20055561-20055603)
chr8 (318-368)||(24507439-24507489)
chr8 (317-367)||(24576641-24576691)
[»] scaffold0205 (1 HSPs)
scaffold0205 (318-368)||(10974-11024)
[»] scaffold0005 (1 HSPs)
scaffold0005 (317-364)||(215258-215305)
[»] scaffold0328 (1 HSPs)
scaffold0328 (320-366)||(10294-10340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (317-369)||(40777-40829)
[»] scaffold0101 (1 HSPs)
scaffold0101 (317-376)||(10776-10835)


Alignment Details
Target: chr7 (Bit Score: 472; Significance: 0; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 18 - 585
Target Start/End: Complemental strand, 26563249 - 26562683
Alignment:
Q  18 gttctgaacctgctagagcgtcaattccatggagacatatggaccaaaacgctcaagacaagacactacggcctgagtgagcatactagttccgatgcac 117  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||| ||||||||||||||    
T  26563249 gttctggacctactagagcgtcaattccatggagacatatggatcaaaacgctcaagacaagaaactacagcttgagtgagcatattagttccgatgcac 26563150  T
Q  118 attaccgcacataccgcacataagcacccccatgtgcttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26563149 attaccgcacataccgcacataagcacccccatgtgcttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtc 26563050  T
Q  218 gttagcgcctctttatcctgtctaagagtgatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactc 317  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26563049 gttagcgcctctttatcctatctaagagtgatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactc 26562950  T
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagaccgcaccaccgccgtgttggagcactgcacgccaccattgcc 417  Q
    || | |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  26562949 tggcctaagcgttggagtgctaatgtgcctgcagacacctttcgttccaccgtgaagaccgcaccgccgccgtgtttgagcactgcacgccaccattgcc 26562850  T
Q  418 ttcatctgttcattattggacatatcaaatgtattcacacnnnnnnnnnagataaacaaatttaacctattccattcattaaattcgtcataatacatac 517  Q
    ||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26562849 ttcatttgttcattattggacatatcaaatgtattcacac-ttttttttagataaacaaatttaacctattccattcattaaattcgtcataatacatac 26562751  T
Q  518 tgaaatataatcaaaagtgtagtgagtagcataagtgagtgtcgctctatctaacaattgaacaatat 585  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26562750 taaaatataatcaaaagtgtagtgagtagcataagtgagtgtcgctctatctaacaattgaacaatat 26562683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 784 - 876
Target Start/End: Complemental strand, 26562678 - 26562586
Alignment:
Q  784 tgatgcatgtccatcattctgacccatgtttactccatcttccacggaacctgttgctattcatgtttggttctgctgttgatgatgtccatc 876  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26562678 tgatgcatgtccatcattctgacccatgtttactccatcttccacggaacctgttgctattcatgtttggttctgctgttgttgatgttcatc 26562586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 154 - 405
Target Start/End: Complemental strand, 34890116 - 34889866
Alignment:
Q  154 cttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcg 253  Q
    ||||||||| | ||| ||||||||||||| ||||| ||||||||  |  ||||||||||||  ||||  || ||| || |||||| |||| |||||| ||    
T  34890116 cttcctgcaccgtacttgtggcctccaacggctccttgatgaggcaccacatttcacagaatccgttgtcgtctccttctcctgtataagggtgattccg 34890017  T
Q  254 cgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagac 353  Q
    | ||||| |||||||| ||||  ||||| |||| ||| |||||||| ||||||||||||||| ||||||| || ||||||||| |||||| ||||||| |    
T  34890016 catcaccctcaaggtatgattcttttcccacacgcttgtacacattcaacctcatttcctacactgactt-agtgttggagtggtaacgttcctgcaggc 34889918  T
Q  354 acctttcgttccaccatgaagaccgcaccaccgccgtgttggagcactgcac 405  Q
    ||| ||||||||| | || ||| ||||||| |||||||| ||||||| ||||    
T  34889917 acccttcgttccatcgtggagatcgcaccatcgccgtgtcggagcaccgcac 34889866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 247 - 376
Target Start/End: Original strand, 12163675 - 12163804
Alignment:
Q  247 gatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcc 346  Q
    |||| ||||||||| ||||| ||||||| |||||| ||| | ||||||||||| |||| |||||||||| || || | ||||||||||||||||||||||    
T  12163675 gattccgcgtcaccctcaagttacgattcatttcccacataattttacacattcaaccccatttcctacactaacatgagcgttggagtgctaacgtgcc 12163774  T
Q  347 tgcagacacctttcgttccaccatgaagac 376  Q
    | ||| |||| | ||||||||| |||||||    
T  12163775 ttcaggcaccctccgttccaccgtgaagac 12163804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 2226710 - 2226618
Alignment:
Q  284 cacactttt-acacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaaga 375  Q
    ||||||||| |||||||| | ||||||||| || || |||| |||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  2226710 cacacttttcacacatttcatctcatttcccacactaacttgagcgttggagtgctaatgtgcctgcagacacctttcgtcccaccgtgaaga 2226618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 5925533 - 5925584
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  5925533 ctgacttgatcgttggagtgctaacgtgcctgcagacacctttcgttccacc 5925584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 13292181 - 13292240
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| |||||| |||||||||||| |||||||||||||||| |||||||| ||||||    
T  13292181 ctgacttgagcgttagagtgctaacgtacctgcagacacctttccttccaccacgaagac 13292240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 21161274 - 21161224
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  21161274 ctgacttgagcgttggagtgctaacgtgcctgcagaca-ctttcgttccacc 21161224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 7486570 - 7486527
Alignment:
Q  325 agcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||||||||||||||||||||||  |||||||| |||||||    
T  7486570 agcgttggagtgctaacgtgcctgcatgcacctttcattccacc 7486527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 9135419 - 9135478
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| |||||| ||||||||||||||||  |  |||||||||||||||| |||||||    
T  9135419 ctgacttgagcgttagagtgctaacgtgcctatatgcacctttcgttccaccgtgaagac 9135478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 12644810 - 12644759
Alignment:
Q  325 agcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||| ||||||||||| ||||||||  |||||||||||||||| |||||||    
T  12644810 agcgtcggagtgctaacttgcctgcatgcacctttcgttccaccgtgaagac 12644759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 26762969 - 26763020
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| ||||||||||||||||||||||||||   |||||||| ||||||    
T  26762969 ctgacttgagcgttggagtgctaacgtgcctgcaagaacctttcgctccacc 26763020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 27803401 - 27803358
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttc 360  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||    
T  27803401 ctgacttgagcgttggagtgctaacgtgcctgtagacatctttc 27803358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 9885710 - 9885780
Alignment:
Q  271 gatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaac 341  Q
    |||| |||||| ||||| ||||||| ||| ||| ||||||| ||| | ||||| |||||||||||||||||    
T  9885710 gattcatttcccacacatttttacaaattcaacgtcatttcatacaccgacttgagcgttggagtgctaac 9885780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 39879420 - 39879362
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaaga 375  Q
    ||||||| ||||||  |||| ||||||| |||||| ||||||||||||||||| |||||    
T  39879420 ctgacttgagcgttaaagtgttaacgtgtctgcaggcacctttcgttccaccacgaaga 39879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 8e-42; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 151 - 354
Target Start/End: Original strand, 5528268 - 5528471
Alignment:
Q  151 gtgcttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatt 250  Q
    |||||||||||| | ||||  ||||||||||||||||||| |||| | || |||| ||||| |   |||| ||||||| || |||| | |||| ||||||    
T  5528268 gtgcttcctgcaccgtacacatggcctccaacagctccctaatgaagcgccgcatctcacaaagaccgttggcgcctccttctcctatataagggtgatt 5528367  T
Q  251 tcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgca 350  Q
      |||||||| |||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||||    
T  5528368 ctgcgtcaccctcaaggtacgatttatttctcacacacttttacacattcaacctcatttcctactctgacttgggtgttggaatgctaacgtgcctgca 5528467  T
Q  351 gaca 354  Q
    ||||    
T  5528468 gaca 5528471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 27158381 - 27158266
Alignment:
Q  241 aagagtgatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaa 340  Q
    ||||||||||   ||||||| ||||||||| ||| |||||| ||||||||||||||||| ||||| ||||| ||| |||||||||| |||||||||||||    
T  27158381 aagagtgattcaacgtcaccctcaaggtacaattcatttcccacacacttttacacattcaaccttatttcgtacactgacttaagtgttggagtgctaa 27158282  T
Q  341 cgtgcctgcagacacc 356  Q
     ||| |||||||||||    
T  27158281 agtgtctgcagacacc 27158266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 253 - 368
Target Start/End: Original strand, 35314118 - 35314231
Alignment:
Q  253 gcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcaga 352  Q
    |||||||| ||||||||||||| |||||| ||||| ||||  ||||| || |||||||||||  ||||||| |||||||||||||||||||| ||||| |    
T  35314118 gcgtcaccctcaaggtacgattcatttcccacacatttttgtacattcaatctcatttccta--ctgacttgagcgttggagtgctaacgtgtctgcaaa 35314215  T
Q  353 cacctttcgttccacc 368  Q
    |||| | |||||||||    
T  35314216 caccctccgttccacc 35314231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 1475806 - 1475723
Alignment:
Q  293 acacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    |||||||| | |||||||| ||| ||||||| ||||||||||||||| | |||||||||||||||||||| ||||| |||||||    
T  1475806 acacatttcatctcatttcttacactgacttgagcgttggagtgctagcatgcctgcagacacctttcgtcccaccgtgaagac 1475723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 350
Target Start/End: Complemental strand, 10896200 - 10896103
Alignment:
Q  253 gcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgca 350  Q
    ||||| || ||||||||||||| |||| || ||||| || |||| ||  ||||||||| |||| || |||| ||||||||||||||||||||||||||    
T  10896200 gcgtcgccctcaaggtacgattcattttctgcacaccttaacactttcgacctcatttactacactaacttgagcgttggagtgctaacgtgcctgca 10896103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 350
Target Start/End: Complemental strand, 8868566 - 8868367
Alignment:
Q  151 gtgcttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatt 250  Q
    ||||||| |||| | |||| ||| |||||||| ||||| ||  |||| || | ||||||||||||   ||||| |||| || ||||   |||| || |||    
T  8868566 gtgcttcttgcaccgtacacgtgtcctccaacggctccatgccgaggcgccgtatttcacagaagcttttagcccctccttctcctacataagggttatt 8868467  T
Q  251 tcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgca 350  Q
    | ||||| ||  |||||||||||  |||| |  ||||| || |||||||  |||||||||||||| || |||| || |||||||||||||||||||||||    
T  8868466 ttgcgtcgcccgcaaggtacgatccattttccgcacaccttaacacattcgacctcatttcctacactaacttgagtgttggagtgctaacgtgcctgca 8868367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 12516215 - 12516159
Alignment:
Q  320 acttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    |||| ||||| |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  12516215 acttgagcgtcggagtgctaacgtgtctgcaggcacctttcgtttcaccatgaagac 12516159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 325 - 376
Target Start/End: Original strand, 2311900 - 2311951
Alignment:
Q  325 agcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    |||||||||||||||||||  ||||||||||||||| |||||||| ||||||    
T  2311900 agcgttggagtgctaacgtatctgcagacacctttcattccaccacgaagac 2311951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 360
Target Start/End: Original strand, 8122972 - 8123015
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttc 360  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  8122972 ctgacttgagcgttggagtgctaacgtgcctgcatacacctttc 8123015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 9007834 - 9007879
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgt 362  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||    
T  9007834 ctgacttgagcgttggagtgttaacgtgcctgcaggcacctttcgt 9007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 304 - 376
Target Start/End: Original strand, 7743393 - 7743465
Alignment:
Q  304 ctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    |||||||||||| || |||| |||||| |||||||||||||| |||| | |||||||||| |||  |||||||    
T  7743393 ctcatttcctacactaacttgagcgttcgagtgctaacgtgcatgcatatacctttcgtttcactgtgaagac 7743465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 17485682 - 17485733
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| |||||||| ||||||| |||||  ||||||||||||||||||||    
T  17485682 ctgacttgagcgttggggtgctaatgtgcccacagacacctttcgttccacc 17485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 21649446 - 21649395
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| | |||||| |||||||||||| ||||| ||||||||||||||||    
T  21649446 ctgacttgatcgttggggtgctaacgtgcttgcaggcacctttcgttccacc 21649395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 25410406 - 25410492
Alignment:
Q  254 cgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaac 341  Q
    ||||||| || || ||||||| |||||| ||| | ||||||||||| || |||||||||||| ||||||| ||| || ||||||||||    
T  25410406 cgtcaccctccagatacgattcatttcccacata-ttttacacattcaatctcatttcctacactgacttgagcattagagtgctaac 25410492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 10896416 - 10896326
Alignment:
Q  29 gctagagcgtcaattccatggagacatatggacc-aaaacgctcaagacaagacactacggcctgagtgagcatactagttccgatgcaca 118  Q
    ||||||||| |||||||||| |||||  |||||| |||||  |||| |||||||  ||| |||||||||||||  ||||||||| ||||||    
T  10896416 gctagagcgccaattccatgaagacacgtggacccaaaaccgtcaaaacaagacgttacagcctgagtgagcacgctagttccggtgcaca 10896326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 1e-31; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 53402638 - 53402496
Alignment:
Q  202 gcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacattta 301  Q
    ||||||||| |||| |||||||||||| || |||| | |||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| |    
T  53402638 gcatttcacggaagacgttagcgcctcattctcctatataagggtgatttcgcgtcaccctcaaggtacgattcatttcccacacacttttacacattca 53402539  T
Q  302 acctcatttcctactctgacttaagcgttggagtgctaacgtg 344  Q
     ||||||||||| | | ||||| ||||||| | ||||||||||    
T  53402538 tcctcatttcctgcaccgacttgagcgttgaaatgctaacgtg 53402496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 444
Target Start/End: Original strand, 5321859 - 5322137
Alignment:
Q  166 tacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcgcgtcaccttcaa 265  Q
    |||| ||||||||||||   |||||||||||| ||  |||||||||||||||||||| | ||| || | || | |||  ||||||    |||||||||||    
T  5321859 tacacgtggcctccaactattccctgatgaggcgccacatttcacagaagtcgttagtgtctccttcttctatataaaggtgattcaatgtcaccttcaa 5321958  T
Q  266 ggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttcc 365  Q
      ||||||| ||||   || || | ||||||||| ||||||||||||||| ||||||| | | |||  |||||||| |||||| |  ||||||||| |||    
T  5321959 actacgattcatttttcacgcattgttacacattcaacctcatttcctacactgacttgaacattgatgtgctaacatgcctgtaagcacctttcgctcc 5322058  T
Q  366 accatgaagaccgcaccaccgccgtgttggagcactgcacgccaccattgccttcatctgttcattattggacatatca 444  Q
    | | ||||||| ||||| || || |   | | |||||||  ||||| ||||||| |||||||||||||| || ||||||    
T  5322059 atcgtgaagactgcaccgcctccattccgaaacactgcataccaccgttgcctttatctgttcattatttgagatatca 5322137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 322
Target Start/End: Complemental strand, 4826372 - 4826199
Alignment:
Q  154 cttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtg-----a 248  Q
    ||||||||| | |||| ||||||| ||||  |||  |||||||| |||||||||||| ||||||||||||||||| || |||| | | |||| |     |    
T  4826372 cttcctgcaccgtacacgtggccttcaacgtctctttgatgaggcgctgcatttcacggaagtcgttagcgcctccttctcctatattagagagattata 4826273  T
Q  249 tttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgact 322  Q
    || ||||||| | |||| |||||||| |||||| |||||||||||| || | || |||||||| ||| ||||||    
T  4826272 ttccgcgtcatcctcaaagtacgattcatttcccacacacttttacccactcaatctcatttcttacactgact 4826199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 320 - 368
Target Start/End: Complemental strand, 12683815 - 12683767
Alignment:
Q  320 acttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  12683815 acttgagcgttggagtgctaacgtgcctgcaggcacctttcgttccacc 12683767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 14602073 - 14602120
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttc 364  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  14602073 ctgacttgagcgttggattgctaacgtgcctgcagacaactttcgttc 14602120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 15514619 - 15514670
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| ||||||||||||||||||||||| ||| |||| |||||||||||    
T  15514619 ctgacttgagcgttggagtgctaacgtgcctacaggcacccttcgttccacc 15514670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 53618849 - 53618794
Alignment:
Q  289 ttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtg 344  Q
    |||| |||||| ||||||||||| ||| |||||||||||||| |||||||||||||    
T  53618849 tttttcacattcaacctcatttcttacactgacttaagcgttagagtgctaacgtg 53618794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 3981981 - 3981924
Alignment:
Q  319 gacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||| || |||||||||||||||||| ||||  |||||||||||||||| |||||||    
T  3981981 gacttgagtgttggagtgctaacgtgcatgcatgcacctttcgttccaccgtgaagac 3981924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 13171112 - 13171065
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttc 364  Q
    ||||||| || |||||||||||||||||||||||  ||||||||||||    
T  13171112 ctgacttgagagttggagtgctaacgtgcctgcaagcacctttcgttc 13171065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 15742211 - 15742270
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| |||||  ||||||||||||||| |||| ||||||||| ||||||| ||||||    
T  15742211 ctgacttgagcgtaagagtgctaacgtgccagcaggcacctttcgctccaccacgaagac 15742270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 43543289 - 43543395
Alignment:
Q  253 gcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcaga 352  Q
    |||||||| ||||| ||| ||| |||||| ||||||| |||| |||  |||||||||| |||| |||| || | | ||||| |||| ||||||||||| |    
T  43543289 gcgtcaccctcaagatacaattcatttcccacacactcttacgcatacaacctcattttctacactgatttgaacattggaatgcttacgtgcctgcaaa 43543388  T
Q  353 caccttt 359  Q
    || ||||    
T  43543389 catcttt 43543395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 5518573 - 5518524
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttcca 366  Q
    ||||||| ||||||| |||||||||||| |||||  ||||||||||||||    
T  5518573 ctgacttgagcgttgaagtgctaacgtgtctgcactcacctttcgttcca 5518524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 154 - 375
Target Start/End: Complemental strand, 40800319 - 40800099
Alignment:
Q  154 cttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcg 253  Q
    ||||||||| | |||||||||| ||||||  ||| ||||| ||   |  |||||||| ||||||||||||  ||| || |||| | |||| |||||||||    
T  40800319 cttcctgcaccgtacatgtggcttccaacgactcactgataagacaccacatttcacggaagtcgttagcatctccttctcctatataagggtgatttcg 40800220  T
Q  254 cgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagac 353  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||| | ||| |||||| |||| || | || | ||||| ||||||||||||||| ||  |    
T  40800219 cgtcaccctcaaggtacgattcatttcctccacacttttacacaatcaacatcattt-ctacactaatttgaacgttgaagtgctaacgtgcctacattc 40800121  T
Q  354 acctttcgttccaccatgaaga 375  Q
    ||||||||||||||| ||||||    
T  40800120 acctttcgttccaccgtgaaga 40800099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 151 - 356
Target Start/End: Complemental strand, 17560963 - 17560757
Alignment:
Q  151 gtgcttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatt 250  Q
    |||||||||||| | ||||  ||||||||||| |||| |||||||||  | || |||||  ||| | ||||||||||| || |||| | |||| ||||||    
T  17560963 gtgcttcctgcaccgtacacatggcctccaacggctctctgatgaggctccgcgtttcatggaatttgttagcgcctccttctcctatataagggtgatt 17560864  T
Q  251 tcgcgtcaccttcaaggtacgatttatttc-ctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgc 349  Q
      |||||||| ||||||||| ||| ||||  | ||||| | ||||||||| ||||||||||||||| ||||||| ||||||||  |||||||||||||||    
T  17560863 ctgcgtcaccctcaaggtacaattcatttttccacacattcttacacattcaacctcatttcctacactgacttgagcgttgggctgctaacgtgcctgc 17560764  T
Q  350 agacacc 356  Q
    |||||||    
T  17560763 agacacc 17560757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 41501066 - 41501183
Alignment:
Q  252 cgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcag 351  Q
    ||||||||| ||||||||||||| |||||| ||||  ||||||||||| ||||||||||||||| ||||||| || ||| || |||||| ||||||||||    
T  41501066 cgcgtcaccctcaaggtacgattcatttcccacacttttttacacattaaacctcatttcctacactgacttgagtgttagattgctaatgtgcctgcag 41501165  T
Q  352 acacctttcgttccacca 369  Q
     |||| | ||||||||||    
T  41501166 gcaccctccgttccacca 41501183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 17672019 - 17671947
Alignment:
Q  304 ctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    |||||||||||| |||| || ||| |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  17672019 ctcatttcctacactgatttgagcattggagcgctaacgtgtctgcagacacctttcgttccaccatgaagac 17671947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 12634913 - 12634826
Alignment:
Q  284 cacactttt-acacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccat 370  Q
    ||||||||| |||||||  | |||||||||||| |||||||||| ||||||||| |||||||||||||  ||||||||||||||||||    
T  12634913 cacacttttcacacattccatctcatttcctacactgacttaagagttggagtgttaacgtgcctgcatgcacctttcgttccaccat 12634826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 17626947 - 17626875
Alignment:
Q  304 ctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    |||||||||||| |||| || ||| |||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  17626947 ctcatttcctacactgatttgagcattggagagctaacgtgtctgcagacacctttcgttccaccataaagac 17626875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 376
Target Start/End: Complemental strand, 45715028 - 45714969
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  45715028 ctgacttgagcgttggagtgctaacgtgcctgcatgcacctttcgttccaccaggaagac 45714969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 20120380 - 20120322
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaaga 375  Q
    ||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||    
T  20120380 ctgacttgagagtcggagtgctaacgtgcctgcagacacctttcgttccaccgtgaaga 20120322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 12127721 - 12127781
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagacc 377  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||| |||||  |||||||    
T  12127721 ctgacttgagcgttggagtgctaacgtgcctgcaggtacctttcgtcccaccgcgaagacc 12127781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 12168998 - 12168954
Alignment:
Q  324 aagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  12168998 aagcgttggagtgttaatgtgcctgcagacacctttcgttccacc 12168954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 13779107 - 13779187
Alignment:
Q  267 gtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcct 347  Q
    |||| ||| |||||| ||| ||||||||||||| ||||||||||| ||| || |||| |||||| || |||||||||||||    
T  13779107 gtacaattcatttcccacaaacttttacacattcaacctcatttcttacactaacttgagcgttagactgctaacgtgcct 13779187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 36069479 - 36069296
Alignment:
Q  169 atgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcgcgtcaccttcaaggt 268  Q
    |||||||||| |||||| || |||||||| || ||||||||| ||||  ||||||||||| ||   || || ||  | || |  |||||||| |||||||    
T  36069479 atgtggcctctaacagccccttgatgaggcgccgcatttcacggaagcagttagcgcctccttcctctttcgaaaggcgactctgcgtcaccctcaaggt 36069380  T
Q  269 acgatttatttcctacacactt-ttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcag 351  Q
    || ||| |||||| | ||| || ||||||||| ||||||||||||| | |  |||| ||| || |||||||||||| |||||||    
T  36069379 acaattcatttcccaaacatttcttacacattcaacctcatttcctccacaaacttgagcattagagtgctaacgttcctgcag 36069296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 29711050 - 29711000
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||| ||||||||||||||||||||| |||| |||||||| ||||||||    
T  29711050 tgacttgagcgttggagtgctaacgtgcatgcatacaccttttgttccacc 29711000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 333 - 369
Target Start/End: Complemental strand, 15825171 - 15825135
Alignment:
Q  333 agtgctaacgtgcctgcagacacctttcgttccacca 369  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15825171 agtgctaacgtgcctgcagacacatttcgttccacca 15825135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 45258213 - 45258261
Alignment:
Q  320 acttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||| ||| |||||||| ||||||||||||||||| |||||||||||||    
T  45258213 acttgagctttggagtgttaacgtgcctgcagacatctttcgttccacc 45258261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 26713593 - 26713632
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacc 356  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  26713593 ctgacttgagtgttggagtgctaacgtgcctgcagacacc 26713632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 323
Target Start/End: Complemental strand, 41969516 - 41969382
Alignment:
Q  189 ctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcgcgtcaccttcaaggtacgatttatttcctacacac 288  Q
    ||||||||| |||| |||||||| || | |||||| |||| ||   || | |||| |||| ||||||||||| |||||||||||| |||||  | |||||    
T  41969516 ctgatgaggcgctgtatttcacataaatagttagcacctccttcctctatataagggtgacttcgcgtcaccctcaaggtacgatatattt-ttccacac 41969418  T
Q  289 -ttttacacatttaacctcatttcctactctgactt 323  Q
     |||||| |||| ||||||||||| ||| |||||||    
T  41969417 tttttacccattcaacctcatttcttacactgactt 41969382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 29137933 - 29137883
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||| ||||| || |||||||||| |||||||||| |||||||||||||    
T  29137933 tgacttgagcgtcggtgtgctaacgtacctgcagacatctttcgttccacc 29137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 27846577 - 27846622
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgt 362  Q
    ||||||| | ||||||||||||||||||||||||| ||| ||||||    
T  27846577 ctgacttgatcgttggagtgctaacgtgcctgcaggcacttttcgt 27846622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 28426194 - 28426231
Alignment:
Q  331 ggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  28426194 ggagtgctaatgtgcctgcaggcacctttcgttccacc 28426231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 4e-25; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 213 - 432
Target Start/End: Complemental strand, 11714309 - 11714090
Alignment:
Q  213 aagtcgttagcgcctctttatcctgtctaagagtgatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcc 312  Q
    ||||||| |||||||  || |||| | |||| |||| | | ||||||| ||||||||| ||| |||||| | ||| ||||||||||| ||||||||||||    
T  11714309 aagtcgtcagcgccttcttctcctatataagggtgactccacgtcaccctcaaggtacaattcatttcccatacatttttacacattcaacctcatttcc 11714210  T
Q  313 tactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagaccgcaccaccgccgtgttggagcactgcacgccacca 412  Q
    ||| | ||||| || |||||||||  ||||||||||||  ||||||||||| |||| |||     |||||||| ||||| || ||||   |||||||||     
T  11714209 tacacagacttgagtgttggagtgtgaacgtgcctgcatgcacctttcgttgcaccgtgacatttgcaccaccaccgtgctgaagcaacacacgccaccg 11714110  T
Q  413 ttgccttcatctgttcatta 432  Q
    ||||||||||| ||||||||    
T  11714109 ttgccttcatccgttcatta 11714090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 33189665 - 33189595
Alignment:
Q  158 ctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctc 228  Q
    ||||||| |||| |||||||||||| ||| |||||||||| |||||||||||| ||||  |||||||||||    
T  33189665 ctgcatcgtacacgtggcctccaacggctgcctgatgaggcgctgcatttcacggaagcagttagcgcctc 33189595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 377
Target Start/End: Complemental strand, 33189559 - 33189435
Alignment:
Q  253 gcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcaga 352  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||| | || |||||||  ||| ||| ||| ||| ||| |||||||| |||  ||||      
T  33189559 gcgtcaccatcaaggtacgattcatttcccacacacttttacacactaaatctcatttattacactggcttgagcattgcagtgctaatgtgtttgcaag 33189460  T
Q  353 cacctttcgttccaccatgaagacc 377  Q
    || | |||||||||| | |||||||    
T  33189459 catccttcgttccactacgaagacc 33189435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 12449641 - 12449700
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| |||||  |||||||||||||||| |||||||||||||| |||||| ||||||    
T  12449641 ctgacttgagcgtcagagtgctaacgtgcctacagacacctttcgtcccaccacgaagac 12449700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 30681025 - 30680974
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||| |||||    
T  30681025 ctgacttgagcgttggagtgctaacgtgattgcagacacctttcgtcccacc 30680974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 34187332 - 34187281
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| || ||||| ||||||||||| |||||||||||||||||||||||    
T  34187332 ctgacttgagtgttggtgtgctaacgtgtctgcagacacctttcgttccacc 34187281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 9292077 - 9292128
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| |||||| | |||||||||||| ||||| ||||||||||||||||    
T  9292077 ctgacttgagcgttagcgtgctaacgtgcttgcaggcacctttcgttccacc 9292128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 19331738 - 19331789
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||||||||| ||||| ||||||| ||||||  ||||||||||||||||    
T  19331738 ctgacttaagcgtcggagtactaacgtacctgcaagcacctttcgttccacc 19331789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 12424388 - 12424422
Alignment:
Q  333 agtgctaacgtgcctgcagacacctttcgttccac 367  Q
    ||||||||||||||||||| |||||||||||||||    
T  12424388 agtgctaacgtgcctgcaggcacctttcgttccac 12424422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 16343612 - 16343562
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccac 367  Q
    ||||||| || |||||||||||||||||||||||| |||| |||| |||||    
T  16343612 ctgacttgagtgttggagtgctaacgtgcctgcaggcacccttcgctccac 16343562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 22497356 - 22497405
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttcca 366  Q
    ||||||| ||||| |||||||||||||| |||||  ||||||||||||||    
T  22497356 ctgacttgagcgtcggagtgctaacgtgtctgcaagcacctttcgttcca 22497405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 39003342 - 39003157
Alignment:
Q  166 tacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctcttt----atcctgtctaagagtgatttcgcgtcacct 261  Q
    |||||||| |||||||| ||||||| ||||||  | ||||||| ||||||  |||||| |||| |     ||| | | |||| |||||| ||| |||||     
T  39003342 tacatgtgccctccaacggctccctaatgaggcaccgcatttcgcagaagatgttagcacctcctcctcgatcttatataagggtgattccgcatcaccc 39003243  T
Q  262 tcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcct 347  Q
    ||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| |||| || || |||||| |||||||||||||    
T  39003242 tcaaggtacgattaatttcccacacacttttacacattcaacttcatttcctacactgatttgagtgttggactgctaacgtgcct 39003157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 246 - 365
Target Start/End: Complemental strand, 1485481 - 1485362
Alignment:
Q  246 tgatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgc 345  Q
    ||||| ||||||||| |||||||| |||| ||||||  |||| |||||||||||  | |||| ||||||| |||| || |||||| |||||||||||||     
T  1485481 tgattccgcgtcaccctcaaggtatgattcatttccctcacatttttacacattccatctcaattcctacactgatttgagcgtttgagtgctaacgtgt 1485382  T
Q  346 ctgcagacacctttcgttcc 365  Q
    ||||| ||||| | ||||||    
T  1485381 ctgcatacaccctccgttcc 1485362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 26977773 - 26977722
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  26977773 ctgacttgagcgttggagtgctaacgtgcctgcaggcacctttcgttccacc 26977722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 307
Target Start/End: Original strand, 5696723 - 5696875
Alignment:
Q  154 cttcctgcatcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcg 253  Q
    ||||||||||| | ||||||||||||||| |||| | ||||||| || |||||||||| || | ||||||||||| |   ||| | |||| | ||||  |    
T  5696723 cttcctgcatcgttcatgtggcctccaacggctctcggatgaggcgccgcatttcacataatttgttagcgcctcctccccctatataagggcgattctg 5696822  T
Q  254 cgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctca 307  Q
    ||||||| ||||||||||||| |||||| | |||| ||| |||||| |||||||    
T  5696823 cgtcaccctcaaggtacgattcatttccca-acacgtttgcacattcaacctca 5696875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 4601545 - 4601596
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  4601545 ctgacttgagcgtcggagtgctaacgtgcctgcagtcacctttcgttccacc 4601596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 30732566 - 30732501
Alignment:
Q  301 aacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttcca 366  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||||||||| |||| | |||||||    
T  30732566 aacctcatttcctacaatgacttgagcattggagtgctaacgtgcctgcaggcaccctccgttcca 30732501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 2141002 - 2141060
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaaga 375  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||||||| ||| ||||||    
T  2141002 ctgacttgagcgttggagtgctaagttgcctgcatacacctttcgttctaccgtgaaga 2141060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 14255089 - 14255147
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    |||||| ||||||||||||||| ||||| ||||| |||| |||||||||||| ||||||    
T  14255089 tgacttgagcgttggagtgctatcgtgcttgcaggcacccttcgttccaccacgaagac 14255147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 16050426 - 16050384
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttc 360  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  16050426 tgacttgagcgttggagtgctaacgtgcctgcagatacctttc 16050384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 8018995 - 8018923
Alignment:
Q  304 ctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||||| |  ||||||| ||||| | |||||||||||||||| ||| ||||||||| |||||| ||||||    
T  8018995 ctcatttcccatactgacttgagcgtcgtagtgctaacgtgcctgtagatacctttcgtcccaccacgaagac 8018923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 16522807 - 16522759
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttcca 366  Q
    |||||| | ||||| ||||||||||||||| ||||||||||||||||||    
T  16522807 tgacttgaacgttgaagtgctaacgtgccttcagacacctttcgttcca 16522759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 320 - 368
Target Start/End: Complemental strand, 18246173 - 18246125
Alignment:
Q  320 acttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  18246173 acttgagcgttggagtgttaacgtgcttacagacacctttcgttccacc 18246125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 376
Target Start/End: Complemental strand, 16030428 - 16030369
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| ||| || || || ||||||||||||||||||||||| ||||||| |||||||    
T  16030428 ctgacttgagcatttgactgataacgtgcctgcagacacctttcattccaccgtgaagac 16030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 21098903 - 21098954
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| | ||| |||||||||| |||||||||| ||||||||||||||||    
T  21098903 ctgacttgatcgtcggagtgctaatgtgcctgcagccacctttcgttccacc 21098954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 22414808 - 22414757
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| |||||  |||||||||||||||||| | ||||||||||||||||    
T  22414808 ctgacttgagcgtcagagtgctaacgtgcctgcgggcacctttcgttccacc 22414757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 25408129 - 25408078
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||| |||||||    
T  25408129 ctgacttgagcattggagtgctaacgtgtctgcaggcacctttcattccacc 25408078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 1659848 - 1659898
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  1659848 tgacttgagcgttggagtgataacgtgtatgtagacacctttcgttccacc 1659898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 376
Target Start/End: Original strand, 5459776 - 5459825
Alignment:
Q  327 cgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||||||||||||| ||||||  |||||||||| |||||| ||||||    
T  5459776 cgttggagtgctaacgtacctgcatgcacctttcgtcccaccacgaagac 5459825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 33101567 - 33101608
Alignment:
Q  319 gacttaagcgttggagtgctaacgtgcctgcagacacctttc 360  Q
    ||||| ||||||||||||||||||||||||||  ||||||||    
T  33101567 gacttgagcgttggagtgctaacgtgcctgcatgcacctttc 33101608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 46016133 - 46016097
Alignment:
Q  331 ggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46016133 ggagtgctaacgtgcctgca-acacctttcgttccacc 46016097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 52565613 - 52565564
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttcca 366  Q
    ||||||| |||||  ||||||||||||| |||||| ||||||||||||||    
T  52565613 ctgacttgagcgtcagagtgctaacgtgtctgcaggcacctttcgttcca 52565564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 284 - 368
Target Start/End: Original strand, 69248 - 69333
Alignment:
Q  284 cacactttt-acacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||||| |||||||  | |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||    
T  69248 cacacttttcacacattccatctcatttcctacactgacttgagcgttggagtgctaacgtgcctgcaggcaccttttgttccacc 69333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 26348138 - 26348188
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26348138 tgacttgagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 26348188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 376
Target Start/End: Complemental strand, 24546379 - 24546321
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24546379 ctgactttagcgt-ggagttctaacgtgcctgcagacacctttcgttccaccatgaagac 24546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 368
Target Start/End: Complemental strand, 34443473 - 34443268
Alignment:
Q  163 tcatacatgtggcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagcgcctctttatcctgtctaagagtgatttcgcgtcacctt 262  Q
    |||||||||||||||||||| || || ||||||||  |  |||||||| ||||  ||||| ||||| ||   |||| |||| | || |  |||||||| |    
T  34443473 tcatacatgtggcctccaacggc-ccttgatgaggctccacatttcacggaagcagttagagcctcctttctctgtataagggcgactctgcgtcaccct 34443375  T
Q  263 caaggtacgattta--tttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttc 360  Q
    |||||||| ||||   ||||| ||||||||||||||||| ||| ||||||||||| ||||||| |||||| || ||||||||| ||  ||   |||||||    
T  34443374 caaggtacaatttcattttcccacacacttttacacattcaacttcatttcctacactgacttgagcgtt-gaatgctaacgtaccaacacgaacctttc 34443276  T
Q  361 gttccacc 368  Q
    ||||||||    
T  34443275 gttccacc 34443268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 25537430 - 25537387
Alignment:
Q  325 agcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||    
T  25537430 agcgttggagtgctaacgtgcttgcaggcacctttcgttccacc 25537387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 18803951 - 18803899
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacca 369  Q
    |||| |||| |||||||||||||||||| || ||| |||||||||||||||||    
T  18803951 ctgaattaatcgttggagtgctaacgtgtcttcaggcacctttcgttccacca 18803899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 16621233 - 16621182
Alignment:
Q  325 agcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| |||| |||||||||| || ||||||||||||||||| |||||||    
T  16621233 agcgttgaagtgttaacgtgcctacatacacctttcgttccaccgtgaagac 16621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 27083295 - 27083342
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttc 364  Q
    ||||||| || ||||||||||||||||| |||||||||| ||||||||    
T  27083295 ctgacttgagtgttggagtgctaacgtgtctgcagacacatttcgttc 27083342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 26163669 - 26163619
Alignment:
Q  316 tctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttcca 366  Q
    |||||||| |||||||||||||||| |||| ||||  ||||||||||||||    
T  26163669 tctgacttgagcgttggagtgctaatgtgcatgcatgcacctttcgttcca 26163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 17249417 - 17249462
Alignment:
Q  174 gcctccaacagctccctgatgaggtgctgcatttcacagaagtcgt 219  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||    
T  17249417 gcctccaacggctccctgatgaggtgccgcgtttcacggaagtcgt 17249462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 4483 - 4534
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacca 369  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  4483 tgacttgagcgttggagtgctaacgtgcttgcagacacctttcgttccacca 4534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 23269279 - 23269228
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||||||    
T  23269279 ctgacttaagtgttggagtgctaacttgcctgtagacacctttcgttccacc 23269228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 15663498 - 15663547
Alignment:
Q  174 gcctccaacagctccctgatgaggtgctgcatttcacagaagtcgttagc 223  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  15663498 gcctccaacggctccctgatgaggcgctgcatttcacggaagtcgttagc 15663547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 17927762 - 17927814
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacca 369  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||| ||||||    
T  17927762 ctgacttaagcgttggagtgctaacgtgcatgcatgcacctttcgtcccacca 17927814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 22454275 - 22454350
Alignment:
Q  301 aacctcatttcctactctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||||||||||| |||||||  |||||||||||| ||||||||| ||| |||| | ||||||||  |||||||    
T  22454275 aacctcatttcctacactgacttgggcgttggagtgccaacgtgcctacaggcaccctccgttccactgtgaagac 22454350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 4565465 - 4565502
Alignment:
Q  331 ggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4565465 ggagtgctaacatgcctgcagacacctttcgttccacc 4565502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 347
Target Start/End: Complemental strand, 8599982 - 8599882
Alignment:
Q  246 tgatttcgcgtcaccttcaaggtacgatttatttcctacacacttttacacatttaacctcatttcctactctgacttaagcgttggagtgctaacgtgc 345  Q
    ||||||||||||| | ||| ||||||||| |||| || |||  |||| |||||| ||| | ||||||||| ||||||| |||||| ||||| ||||||||    
T  8599982 tgatttcgcgtcatcctcatggtacgattaattttctgcac-ttttttcacattcaactttatttcctacactgacttgagcgttcgagtgttaacgtgc 8599884  T
Q  346 ct 347  Q
    ||    
T  8599883 ct 8599882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 30477674 - 30477629
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgt 362  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||    
T  30477674 ctgacttgagcgttggagtgctaacgtgcatgcagacatctttcgt 30477629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 751
Target Start/End: Original strand, 3222360 - 3222396
Alignment:
Q  715 cacttgagtaaaacctaaattcataagccacaaaagc 751  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3222360 cacttgagtaaaacctaaattcataagccactaaagc 3222396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 369
Target Start/End: Complemental strand, 15058059 - 15058016
Alignment:
Q  326 gcgttggagtgctaacgtgcctgcagacacctttcgttccacca 369  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  15058059 gcgttgtagtgctaacgtgcctgcatgcacctttcgttccacca 15058016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 367
Target Start/End: Original strand, 23497200 - 23497243
Alignment:
Q  324 aagcgttggagtgctaacgtgcctgcagacacctttcgttccac 367  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||    
T  23497200 aagcgttggagtgctaacatgcgtgcagatacctttcgttccac 23497243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 14666898 - 14666948
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||| | ||| ||||||||||||||||||||| ||||||| ||||||||    
T  14666898 tgacttgatcgtcggagtgctaacgtgcctgcaggcaccttttgttccacc 14666948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 326 - 368
Target Start/End: Complemental strand, 20055603 - 20055561
Alignment:
Q  326 gcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||| ||||| |||||||||||||||||||| |||||||||||    
T  20055603 gcgtcggagtactaacgtgcctgcagacacccttcgttccacc 20055561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 24507489 - 24507439
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||| | ||||||||| ||||||||| ||||||||||||||| ||||||    
T  24507489 tgacttgatcgttggagtactaacgtgcatgcagacacctttcgctccacc 24507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 317 - 367
Target Start/End: Original strand, 24576641 - 24576691
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccac 367  Q
    ||||||| |||||  ||||| |||||||||||||| |||||||||||||||    
T  24576641 ctgacttgagcgtcagagtgttaacgtgcctgcaggcacctttcgttccac 24576691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 10974 - 11024
Alignment:
Q  318 tgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacc 368  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  10974 tgacttgagcgttggagtgctaacgtgcctgcatacaccttttgttccacc 11024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 215305 - 215258
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttc 364  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  215305 ctgacttgagcgttggattgctaacgtgcctgcagacaactttcgttc 215258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 366
Target Start/End: Original strand, 10294 - 10340
Alignment:
Q  320 acttaagcgttggagtgctaacgtgcctgcagacacctttcgttcca 366  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  10294 acttaagcgttggagtgctaatgtgcctacaggcacctttcgttcca 10340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 40829 - 40777
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccacca 369  Q
    ||||||| ||||||||||||||||||||||||||  | |||||||||| ||||    
T  40829 ctgacttgagcgttggagtgctaacgtgcctgcatgcgcctttcgttctacca 40777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 10776 - 10835
Alignment:
Q  317 ctgacttaagcgttggagtgctaacgtgcctgcagacacctttcgttccaccatgaagac 376  Q
    ||||||| | ||| ||||||||||| ||||| |||||||||||| |||||||| ||||||    
T  10776 ctgacttgaacgtcggagtgctaacatgcctacagacacctttcattccaccacgaagac 10835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University