View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20762_low_28 (Length: 271)
Name: NF20762_low_28
Description: NF20762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20762_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 15878178 - 15877925
Alignment:
| Q |
1 |
caacatatagagcaagaagatcaaaaggaaagttagctgagagtccttttgctttcaaagaggattctggacctgctggtactactggtagttaatttcc |
100 |
Q |
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| T |
15878178 |
caacatatagagcaagaagatcaaaaggaaagttagctgagagtccttttgctttcaaagaggattctggacctgctggtactactggtagttaatttcc |
15878079 |
T |
|
| Q |
101 |
aatatctgatgcaaaactataaatgccaaccacccttttggacaattatgtactatccatgtgccaagaattcagattattagtataaaggacattactc |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15878078 |
aatatctgatgcaaaactgtaaatgccaaccacccttttggacaattatgtactatccatgtgccaagaattcagattattagtataaaggacattactc |
15877979 |
T |
|
| Q |
201 |
attctcacagtttataatcaatattagtggttttattctacctgatacagaatc |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15877978 |
attctcacagtttataatcaatattagtggttttattctacctgatacagaatc |
15877925 |
T |
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