View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20763_low_11 (Length: 293)
Name: NF20763_low_11
Description: NF20763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20763_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 14420893 - 14420614
Alignment:
| Q |
1 |
ctctttggatttgttagacttcattttcttcacagcaacctcctaaaagatgttattgtccaatttttagttagcatatgaaaaaatatgattgaattat |
100 |
Q |
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| T |
14420893 |
ctctttggatttgttagacttcattttcttcacagcaacctcctaaaagatgttattgtccaatttttagttagcatatgaaaaaatatgattgaattat |
14420794 |
T |
|
| Q |
101 |
taatgaacattaaagaatcaatgcagaattttccttaccttctcctccagcattccaaaatagacagtaccatatccaccaactccaatccttctagttt |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14420793 |
taatgagcattaaagaatcaatgcagaattttccttaccttctcctccagcattccaaaatagacagtaccatatccaccaactccaatccttctagttt |
14420694 |
T |
|
| Q |
201 |
catcaaagttatttgtagcatgttcaatctcctcaaaatcataaattactggtctttctgaatcaaattgtgttgcatct |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14420693 |
catcaaagttatttgtagcatgttcaatctcctcaaaatcataaattactggtctttctgaatcaaattgtgttgcatct |
14420614 |
T |
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