View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20764_high_25 (Length: 417)

Name: NF20764_high_25
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20764_high_25
NF20764_high_25
[»] chr5 (27 HSPs)
chr5 (1-394)||(9603542-9603932)
chr5 (274-379)||(2740273-2740378)
chr5 (276-394)||(16327902-16328020)
chr5 (275-379)||(33149634-33149738)
chr5 (273-394)||(18520865-18520986)
chr5 (275-380)||(35943887-35943992)
chr5 (275-379)||(28177775-28177879)
chr5 (275-379)||(35785199-35785303)
chr5 (273-378)||(13811650-13811755)
chr5 (275-379)||(26720516-26720620)
chr5 (275-379)||(26990265-26990369)
chr5 (298-394)||(39557498-39557594)
chr5 (275-394)||(42414283-42414402)
chr5 (273-379)||(36732938-36733044)
chr5 (275-375)||(14831814-14831914)
chr5 (271-343)||(15409642-15409714)
chr5 (275-379)||(40145407-40145511)
chr5 (274-380)||(2252163-2252269)
chr5 (274-379)||(6679697-6679802)
chr5 (275-379)||(33825320-33825424)
chr5 (273-380)||(3921260-3921367)
chr5 (280-338)||(10356639-10356698)
chr5 (273-380)||(31008986-31009093)
chr5 (272-338)||(39688934-39689000)
chr5 (295-364)||(10227905-10227974)
chr5 (275-394)||(20073497-20073616)
chr5 (329-382)||(25831339-25831392)
[»] chr8 (32 HSPs)
chr8 (273-394)||(42221513-42221634)
chr8 (276-394)||(5957831-5957949)
chr8 (275-379)||(1179936-1180040)
chr8 (275-379)||(34012292-34012396)
chr8 (274-394)||(37038478-37038598)
chr8 (1-160)||(6451635-6451794)
chr8 (21-148)||(6457737-6457864)
chr8 (274-379)||(44507083-44507188)
chr8 (275-379)||(12831047-12831151)
chr8 (275-379)||(15197333-15197437)
chr8 (275-379)||(40423939-40424043)
chr8 (280-343)||(10621119-10621182)
chr8 (272-379)||(14547919-14548026)
chr8 (265-338)||(4854900-4854973)
chr8 (275-379)||(504117-504221)
chr8 (275-379)||(43414577-43414681)
chr8 (273-394)||(10284612-10284733)
chr8 (273-338)||(24307627-24307692)
chr8 (275-343)||(15048214-15048281)
chr8 (275-379)||(23122593-23122697)
chr8 (272-380)||(24307788-24307896)
chr8 (273-380)||(16056396-16056503)
chr8 (273-380)||(16383375-16383482)
chr8 (275-344)||(20074965-20075034)
chr8 (275-383)||(30183867-30183975)
chr8 (295-394)||(8841413-8841512)
chr8 (273-340)||(34307214-34307281)
chr8 (274-380)||(32032724-32032829)
chr8 (329-382)||(42354581-42354634)
chr8 (274-382)||(17443824-17443932)
chr8 (79-131)||(6353049-6353101)
chr8 (319-379)||(9122229-9122289)
[»] chr7 (34 HSPs)
chr7 (274-379)||(36362025-36362130)
chr7 (274-379)||(36361909-36362014)
chr7 (274-379)||(3434561-3434666)
chr7 (275-379)||(19329842-19329946)
chr7 (273-379)||(8080379-8080485)
chr7 (278-379)||(3783998-3784099)
chr7 (272-379)||(7389386-7389493)
chr7 (273-379)||(19436183-19436289)
chr7 (272-394)||(36208170-36208292)
chr7 (273-379)||(38837215-38837321)
chr7 (273-379)||(40957705-40957811)
chr7 (273-394)||(45223040-45223161)
chr7 (275-379)||(35137533-35137637)
chr7 (275-394)||(41423682-41423801)
chr7 (278-379)||(3694370-3694471)
chr7 (273-394)||(35468836-35468957)
chr7 (275-379)||(38267040-38267144)
chr7 (275-394)||(4999495-4999614)
chr7 (280-379)||(35522881-35522980)
chr7 (274-380)||(22343360-22343466)
chr7 (274-380)||(41915740-41915846)
chr7 (273-394)||(18207178-18207298)
chr7 (306-382)||(16374817-16374893)
chr7 (275-344)||(46374833-46374902)
chr7 (273-341)||(10343597-10343665)
chr7 (275-394)||(39255905-39256023)
chr7 (273-323)||(11044186-11044236)
chr7 (275-340)||(32564461-32564526)
chr7 (275-343)||(21234401-21234469)
chr7 (276-379)||(32951489-32951592)
chr7 (273-340)||(38044195-38044262)
chr7 (298-380)||(8238236-8238318)
chr7 (274-344)||(46033832-46033902)
chr7 (275-336)||(40846152-40846213)
[»] chr3 (33 HSPs)
chr3 (273-379)||(49607412-49607518)
chr3 (275-382)||(14623832-14623939)
chr3 (276-382)||(13898048-13898154)
chr3 (273-378)||(27714888-27714993)
chr3 (274-382)||(8956761-8956869)
chr3 (275-379)||(26141528-26141632)
chr3 (275-379)||(53982011-53982115)
chr3 (280-379)||(52629305-52629404)
chr3 (272-379)||(54868891-54868998)
chr3 (278-394)||(25407128-25407245)
chr3 (275-379)||(33644200-33644304)
chr3 (272-343)||(11095385-11095456)
chr3 (276-379)||(31456690-31456793)
chr3 (274-379)||(17470404-17470509)
chr3 (287-379)||(20764911-20765003)
chr3 (274-394)||(24699935-24700055)
chr3 (272-380)||(33118846-33118954)
chr3 (274-382)||(35536625-35536733)
chr3 (272-344)||(35965805-35965877)
chr3 (279-379)||(48587087-48587187)
chr3 (275-394)||(8076393-8076512)
chr3 (273-344)||(11347953-11348024)
chr3 (271-379)||(41189760-41189868)
chr3 (275-394)||(41080709-41080826)
chr3 (274-394)||(21746169-21746284)
chr3 (275-344)||(51419391-51419460)
chr3 (287-379)||(39670023-39670115)
chr3 (273-343)||(36707456-36707526)
chr3 (287-394)||(26754707-26754814)
chr3 (273-378)||(35093583-35093688)
chr3 (275-380)||(45058548-45058652)
chr3 (271-379)||(11907367-11907475)
chr3 (275-379)||(47531865-47531969)
[»] chr4 (30 HSPs)
chr4 (273-394)||(50052409-50052530)
chr4 (273-379)||(480443-480549)
chr4 (275-379)||(6034044-6034148)
chr4 (272-379)||(48183045-48183152)
chr4 (275-394)||(50526152-50526271)
chr4 (273-379)||(42044363-42044469)
chr4 (273-394)||(29239884-29240005)
chr4 (275-379)||(11511458-11511562)
chr4 (275-342)||(40574779-40574846)
chr4 (272-394)||(23608232-23608354)
chr4 (272-358)||(29547976-29548062)
chr4 (272-382)||(29977882-29977992)
chr4 (275-380)||(3481654-3481759)
chr4 (274-379)||(29234241-29234346)
chr4 (275-379)||(41236347-41236451)
chr4 (272-394)||(47104541-47104663)
chr4 (275-340)||(8343198-8343263)
chr4 (272-340)||(55475188-55475256)
chr4 (273-379)||(24995103-24995209)
chr4 (274-380)||(47986207-47986313)
chr4 (274-380)||(50813887-50813993)
chr4 (275-379)||(54473529-54473633)
chr4 (273-380)||(19670711-19670818)
chr4 (275-341)||(31910192-31910258)
chr4 (295-380)||(17983738-17983823)
chr4 (325-394)||(28480249-28480318)
chr4 (325-394)||(28481124-28481193)
chr4 (325-394)||(28481999-28482068)
chr4 (319-382)||(18769040-18769103)
chr4 (280-379)||(53352562-53352660)
[»] chr6 (21 HSPs)
chr6 (275-382)||(31953023-31953130)
chr6 (273-379)||(23128123-23128229)
chr6 (273-394)||(12732480-12732601)
chr6 (274-379)||(11427615-11427722)
chr6 (275-379)||(17598554-17598658)
chr6 (279-379)||(28536484-28536582)
chr6 (275-379)||(32869678-32869782)
chr6 (280-382)||(9379705-9379807)
chr6 (278-379)||(22880654-22880755)
chr6 (276-341)||(946377-946442)
chr6 (274-379)||(31976247-31976352)
chr6 (272-380)||(15990037-15990145)
chr6 (273-380)||(30341355-30341462)
chr6 (275-380)||(15508019-15508124)
chr6 (275-343)||(31109432-31109500)
chr6 (273-343)||(31110793-31110861)
chr6 (273-379)||(6209461-6209567)
chr6 (291-380)||(4231564-4231653)
chr6 (273-357)||(15832575-15832659)
chr6 (275-379)||(29857827-29857931)
chr6 (274-340)||(22422053-22422119)
[»] chr2 (33 HSPs)
chr2 (272-379)||(9058477-9058584)
chr2 (274-394)||(7465716-7465836)
chr2 (273-394)||(20700813-20700934)
chr2 (273-394)||(33436081-33436202)
chr2 (275-379)||(13438343-13438447)
chr2 (275-379)||(17473020-17473124)
chr2 (278-394)||(28863458-28863574)
chr2 (276-394)||(41575138-41575257)
chr2 (273-379)||(30915461-30915567)
chr2 (274-379)||(5574484-5574589)
chr2 (278-379)||(19930816-19930917)
chr2 (275-379)||(40613898-40614002)
chr2 (275-379)||(40701478-40701582)
chr2 (272-379)||(10249378-10249485)
chr2 (272-394)||(17823781-17823907)
chr2 (275-380)||(27864704-27864809)
chr2 (274-354)||(33436210-33436290)
chr2 (275-394)||(17819985-17820104)
chr2 (273-380)||(45097730-45097837)
chr2 (273-379)||(42257191-42257297)
chr2 (274-343)||(2533123-2533191)
chr2 (274-375)||(32505648-32505749)
chr2 (263-380)||(26891499-26891616)
chr2 (275-380)||(38732354-38732459)
chr2 (275-343)||(28381687-28381755)
chr2 (273-343)||(38273174-38273244)
chr2 (273-343)||(38882846-38882915)
chr2 (295-380)||(2997482-2997567)
chr2 (275-343)||(4060685-4060753)
chr2 (288-394)||(3439992-3440098)
chr2 (274-344)||(36168835-36168905)
chr2 (295-380)||(13365373-13365458)
chr2 (275-340)||(43490121-43490186)
[»] chr1 (29 HSPs)
chr1 (275-379)||(27564731-27564835)
chr1 (275-379)||(47452316-47452420)
chr1 (274-394)||(51898664-51898784)
chr1 (275-394)||(3302514-3302633)
chr1 (275-379)||(3000319-3000423)
chr1 (275-379)||(9474872-9474976)
chr1 (273-375)||(2581913-2582015)
chr1 (273-379)||(32813245-32813351)
chr1 (273-379)||(38595152-38595258)
chr1 (274-379)||(50630457-50630562)
chr1 (275-379)||(37649198-37649302)
chr1 (275-394)||(48716263-48716382)
chr1 (275-380)||(41608488-41608593)
chr1 (278-379)||(44548372-44548473)
chr1 (275-379)||(43132-43236)
chr1 (273-379)||(8346384-8346490)
chr1 (273-379)||(38632317-38632423)
chr1 (280-394)||(44453984-44454098)
chr1 (274-379)||(37926434-37926539)
chr1 (275-380)||(50590995-50591100)
chr1 (274-394)||(7740732-7740852)
chr1 (273-380)||(5958995-5959102)
chr1 (273-344)||(23597122-23597193)
chr1 (272-343)||(49811559-49811630)
chr1 (282-379)||(26440741-26440838)
chr1 (274-379)||(41758804-41758909)
chr1 (276-394)||(11152359-11152476)
chr1 (306-379)||(13414792-13414865)
chr1 (272-341)||(26274429-26274498)
[»] scaffold1268 (1 HSPs)
scaffold1268 (275-394)||(910-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (275-394)||(910-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (273-379)||(10105-10211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (295-380)||(152518-152603)
[»] scaffold0237 (1 HSPs)
scaffold0237 (275-379)||(4029-4133)
[»] scaffold0110 (1 HSPs)
scaffold0110 (275-380)||(8858-8963)


Alignment Details
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 394
Target Start/End: Original strand, 9603542 - 9603932
Alignment:
Q  1 atgaagtgcgtgacttatttgaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaattttccgcactga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9603542 atgaagtgcgtgacttatttgaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaattttccgcactga 9603641  T
Q  101 tggtgaacaagtcctcaagtttccaccaccacatgtaatcagaggtacattattaatcttttataaaataaattaacatattttccaatgccctaaccct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9603642 tggtgaacaagtcctcaagtttccaccaccacatgtaatcagaggtacattattaatcttttgtaaaataaattaacatattttccaatgccctaaccct 9603741  T
Q  201 tagggcaaat-ttagcatttcccataaatataaattataaagtcacaatacctgtgttagcattatattaagtaagagtaatgatatatagacatcctta 299  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    |||||||||||||| ||| |||||||||    
T  9603742 tagggcaaatgttagcatttcccataaatatagattataaagtcacaatatctgtgttagcattatat----taagagtaatgatacatatacatcctta 9603837  T
Q  300 ggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctct 394  Q
    |||| |||||||  |||| ||||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  9603838 ggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttctctttcatttcgtcttctct 9603932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 2740273 - 2740378
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  374 ctcttt 379  Q
    ||||||    
T  2740373 ctcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 276 - 394
Target Start/End: Original strand, 16327902 - 16328020
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 375  Q
    |||||||||| ||| | |||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||| | | || |||| |||||||| |    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacacttttt 16328001  T
Q  376 ctttcatttcgtcttctct 394  Q
    |||||||||  ||||||||    
T  16328002 ctttcattttctcttctct 16328020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 33149738 - 33149634
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  |||| |||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  375 tcttt 379  Q
    |||||    
T  33149638 tcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 394
Target Start/End: Complemental strand, 18520986 - 18520865
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||| |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  18520986 aagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 18520887  T
Q  373 tctctttcatttcgtcttctct 394  Q
    ||||||| || || ||||||||    
T  18520886 tctcttttatctcctcttctct 18520865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 35943992 - 35943887
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  | | |||||||||| |||| |||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  375 tctttc 380  Q
    ||||||    
T  35943892 tctttc 35943887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 28177775 - 28177879
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||| |||  |||| |||  |||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  375 tcttt 379  Q
    |||||    
T  28177875 tcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 35785199 - 35785303
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | |||||||||  ||||||||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  375 tcttt 379  Q
    |||||    
T  35785299 tcttt 35785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 378
Target Start/End: Original strand, 13811650 - 13811755
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||||| |||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13811749  T
Q  373 tctctt 378  Q
    ||||||    
T  13811750 tctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 26720516 - 26720620
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||||||||  ||  ||||||||  |||| |||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  375 tcttt 379  Q
    |||||    
T  26720616 tcttt 26720620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 26990265 - 26990369
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||||||||  ||  ||||||||  |||| |||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  375 tcttt 379  Q
    |||||    
T  26990365 tcttt 26990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 298 - 394
Target Start/End: Complemental strand, 39557594 - 39557498
Alignment:
Q  298 taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctct 394  Q
    |||||||||||||| |  || ||| | ||||||||||||||||||||||||  |||| |||||||||||||||||||||||| || || ||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcctcttctct 39557498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 42414402 - 42414283
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |  ||||||| |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||  |||| ||||||||    
T  42414302 tcttttctttcctcttctct 42414283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 36733044 - 36732938
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||| | |||||| || |||||||| ||||||||||||||||| |  ||| ||||| |||  |||| |||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  373 tctcttt 379  Q
    |||||||    
T  36732944 tctcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| |||||||  ||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| |||||||||  |||| |||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  375 t 375  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 15409714 - 15409642
Alignment:
Q  271 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    |||||||| |||||| |||||||||||||||||  ||||||| | |||||||| |||||||||||||||||||    
T  15409714 gtaagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgt 15409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 40145407 - 40145511
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| || || ||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  375 tcttt 379  Q
    |||||    
T  40145507 tcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 380
Target Start/End: Complemental strand, 2252269 - 2252163
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||| |||||||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  374 ctctttc 380  Q
    |||||||    
T  2252169 ctctttc 2252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 6679697 - 6679802
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||||||||| |||||||| |||||| |  |||||||| |||||||||||||||||||| |||  |||| |||  |||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  374 ctcttt 379  Q
    ||||||    
T  6679797 ctcttt 6679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 33825424 - 33825320
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||  |||||||| ||||||||| ||||||  | |||||||| ||| |||||||||||||||| ||||||| | |  | |||| |||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  375 tcttt 379  Q
    |||||    
T  33825324 tcttt 33825320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 3921367 - 3921260
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 3921268  T
Q  373 tctctttc 380  Q
    ||||||||    
T  3921267 tctctttc 3921260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 338
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  280 atgatatatagacatccttaggtggtaatacat-ccattgacacctacacaaaaatctga 338  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 380
Target Start/End: Original strand, 31008986 - 31009093
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| |||||||||||||  ||||||| | |  ||||| |||||||||||||||||||  ||| |||||||||  |||| |||||||    
T  31008986 aagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 31009085  T
Q  373 tctctttc 380  Q
    ||| ||||    
T  31009086 tctatttc 31009093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 39689000 - 39688934
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 338  Q
    ||||||| |||||| ||| ||| ||||| |||| ||||||||| |||||||| ||||||||||||||    
T  39689000 taagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 10227974 - 10227905
Alignment:
Q  295 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaa 364  Q
    ||||| |||| ||||||||| |||||||| | |||||||||||||| ||||| |||||||| ||| ||||    
T  10227974 ccttatgtggcaatacatcccttgacaccgatacaaaaatctgacatgtgattatgtggattccacacaa 10227905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 20073616 - 20073497
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||||||||||||| |||| ||  |||||| || |||||||  ||| ||||||||  ||||||| || ||||| ||   |||| |||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  375 tctttcatttcgtcttctct 394  Q
    | |||| | || ||||||||    
T  20073516 tatttcctctcctcttctct 20073497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 25831339 - 25831392
Alignment:
Q  329 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 382  Q
    |||||||| ||||||| ||||||||| |||| |||| |||| ||||||||||||    
T  25831339 aaaaatctaacacgtggtcatgtggaccccacacaaacacattttctctttcat 25831392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 273 - 394
Target Start/End: Original strand, 42221513 - 42221634
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||| |||||||||||||  ||||||| | | |||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||||| || ||||||||    
T  42221613 tctctttcatctcatcttctct 42221634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 394
Target Start/End: Original strand, 5957831 - 5957949
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 375  Q
    |||||||||| |||||||| ||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||||||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  376 ctttcatttcgtcttctct 394  Q
    ||||| | || ||||||||    
T  5957931 ctttcctctcctcttctct 5957949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||  |||||||||| ||  |||| |||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  375 tcttt 379  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 34012396 - 34012292
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  |||| |||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  375 tcttt 379  Q
    |||||    
T  34012296 tcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 37038478 - 37038598
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  374 ctctttcatttcgtcttctct 394  Q
    || |||| | || ||||||||    
T  37038578 ctatttcctctcctcttctct 37038598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6451794 - 6451635
Alignment:
Q  1 atgaagtgcgtg-acttatttgaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaattttccgcactg 99  Q
    |||||||||||| |||| || |||||||||||| | ||||||||| ||||| | ||| ||||||| ||||| ||||  || ||||||||  ||||||| |    
T  6451794 atgaagtgcgtggactt-ttcgaaggtggaattaagcttcctacagatatactcagccaaatcagccccttgccagcccttaaggaaatcctccgcacag 6451696  T
Q  100 atggtgaacaagtcctcaagtttccaccaccacatgtaatcagaggtacattattaatctt 160  Q
    | |||||||||| ||| |||||||||||||| || ||||| |||||||| ||||| |||||    
T  6451695 acggtgaacaagcccttaagtttccaccacctcaagtaattagaggtactttattcatctt 6451635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 6457864 - 6457737
Alignment:
Q  21 gaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaattttccgcactgatggtgaacaagtcctcaagt 120  Q
    |||||||| ||| | ||||||||| ||||| | ||  |||| ||||||||||| |  || |||||||| || |||||||| |||||||||||||||||||    
T  6457864 gaaggtgggattaagcttcctacagatatacttagtcaaattagtcccttaccggcccttaaggaaatctttcgcactgacggtgaacaagtcctcaagt 6457765  T
Q  121 ttccaccaccacatgtaatcagaggtac 148  Q
    ||||||| || |||||||||| ||||||    
T  6457764 ttccacctcctcatgtaatcaaaggtac 6457737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 44507188 - 44507083
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| |||||||||||||||||  | || ||||| |||||||||||||||||||  ||| ||||| ||| ||||| || |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  374 ctcttt 379  Q
    ||||||    
T  44507088 ctcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  375 tcttt 379  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 15197333 - 15197437
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| |||||||  ||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  375 tcttt 379  Q
    |||||    
T  15197433 tcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 40424043 - 40423939
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||| | |||||||||| |||||| || |||||| | |||||||||||||||||||  ||||||||| |||  |||| |||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  375 tcttt 379  Q
    |||||    
T  40423943 tcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 10621182 - 10621119
Alignment:
Q  280 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    |||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgt 10621119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 14547919 - 14548026
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    ||||||||| |||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  14547919 taagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 14548018  T
Q  372 ttctcttt 379  Q
    ||||||||    
T  14548019 ttctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 338
Target Start/End: Complemental strand, 4854973 - 4854900
Alignment:
Q  265 tattaagtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 338  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||    
T  4854973 tatttagtaagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctga 4854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 504221 - 504117
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  375 tcttt 379  Q
    |||||    
T  504121 tcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 43414681 - 43414577
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| |||||||||||||| ||| || ||| || |||||||| |||||||||||| ||||||| |||  ||||||||  |||| |||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  375 tcttt 379  Q
    |||||    
T  43414581 tcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 394
Target Start/End: Complemental strand, 10284733 - 10284612
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||||||| ||||| |||  ||||||  | |||||||| |||||||||| ||||||||  ||| ||||| |||  |||| |||||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactt 10284634  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||| |||| ||||||||    
T  10284633 tctctttcctttcatcttctct 10284612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 24307627 - 24307692
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 338  Q
    |||||| |||||| ||| ||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  24307627 aagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 15048281 - 15048214
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgt 15048214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 23122697 - 23122593
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| ||||| |||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  | || |||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  375 tcttt 379  Q
    |||||    
T  23122597 tcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 380
Target Start/End: Complemental strand, 24307896 - 24307788
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    ||||||| |||||| ||| ||| |||||||||| ||||||||| |||||||| |||||||||||||| | |||  ||| |||| |||  ||||  |||||    
T  24307896 taagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacact 24307797  T
Q  372 ttctctttc 380  Q
    |||||||||    
T  24307796 ttctctttc 24307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 16056503 - 16056396
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| ||||||||| |||  ||||||||| |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  16056503 aagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16056404  T
Q  373 tctctttc 380  Q
    ||||||||    
T  16056403 tctctttc 16056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 380
Target Start/End: Original strand, 16383375 - 16383482
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16383474  T
Q  373 tctctttc 380  Q
    ||||||||    
T  16383475 tctctttc 16383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 20075034 - 20074965
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    ||||||||||| |||||||||||||||||| ||||||  | |||||||| ||| |||||| |||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtg 20074965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 383
Target Start/End: Complemental strand, 30183975 - 30183867
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||| ||||||||| |||| ||||||| | | |||||  | |||||||||||| |||| ||||| ||||   |||| || |||||||||    
T  30183975 gagtaatgatacatatacatccttacgtggcaatacattcctggacactcatacaaaaatctgatacgtaatcatatggacttcatataagcacactttc 30183876  T
Q  375 tctttcatt 383  Q
    |||||||||    
T  30183875 tctttcatt 30183867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 394
Target Start/End: Complemental strand, 8841512 - 8841413
Alignment:
Q  295 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctct 394  Q
    |||||||||| | |||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||||||| | || ||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctct 8841413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 34307214 - 34307281
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 340  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| ||||||||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 380
Target Start/End: Original strand, 32032724 - 32032829
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||| ||| |||||||||| ||||||||| |||||| | |||||||||||||||| |||  ||| |||||||   ||||  |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  374 ctctttc 380  Q
    |||||||    
T  32032823 ctctttc 32032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 42354634 - 42354581
Alignment:
Q  329 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 382  Q
    |||||||||||||||| ||||||||||| || | || |||||||||||||||||    
T  42354634 aaaaatctgacacgtgttcatgtggatctcacataagcacactttctctttcat 42354581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 382
Target Start/End: Original strand, 17443824 - 17443932
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||||||| |||||||||  ||||||    || ||||  |||||||||||||||| ||  ||||||||| |||| ||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  374 ctctttcat 382  Q
    |||||||||    
T  17443924 ctctttcat 17443932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 6353101 - 6353049
Alignment:
Q  79 tcaaggaaattttccgcactgatggtgaacaagtcctcaagtttccaccacca 131  Q
    |||||||| |||||||  |||||||||||||||  || |||||||||||||||    
T  6353101 tcaaggaacttttccgatctgatggtgaacaagcacttaagtttccaccacca 6353049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 9122229 - 9122289
Alignment:
Q  319 acacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    ||||| |||||||||||||||| ||  ||| |||||||||  |||| ||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 9122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 36362025 - 36362130
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  374 ctcttt 379  Q
    ||||||    
T  36362125 ctcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 36362014 - 36361909
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  374 ctcttt 379  Q
    ||||||    
T  36361914 ctcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 3434561 - 3434666
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| |||||||||||||||||| |||||| || |||||||| ||||||||| |||||||||  ||| |||||||||  |||| ||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  374 ctcttt 379  Q
    ||||||    
T  3434661 ctcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 19329842 - 19329946
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||| ||||||||||||||||||| |||| ||||| |||  |||| |||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  375 tcttt 379  Q
    |||||    
T  19329942 tcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 8080485 - 8080379
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||||||| |||||||||||||||  ||| ||||| |||  |||| |||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  373 tctcttt 379  Q
    |||||||    
T  8080385 tctcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 278 - 379
Target Start/End: Original strand, 3783998 - 3784099
Alignment:
Q  278 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 377  Q
    |||||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  378 tt 379  Q
    ||    
T  3784098 tt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 7389386 - 7389493
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||||| ||||||| |||||||||| ||||||  | |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  7389386 taagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 7389485  T
Q  372 ttctcttt 379  Q
    ||||||||    
T  7389486 ttctcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 19436289 - 19436183
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| |||||||||||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| |||||||||  | || |||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  373 tctcttt 379  Q
    |||||||    
T  19436189 tctcttt 19436183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 36208170 - 36208292
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    ||||||| |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||| |||||| ||| ||| ||||| ||   |||| |||| |    
T  36208170 taagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacatt 36208269  T
Q  372 ttctctttcatttcgtcttctct 394  Q
    ||||||||| | || ||||||||    
T  36208270 ttctctttcctctcctcttctct 36208292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 38837215 - 38837321
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |  |||||||||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38837314  T
Q  373 tctcttt 379  Q
    |||||||    
T  38837315 tctcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 40957705 - 40957811
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| |||||||  ||||||||| ||||||  | |||| ||| |||||||||||||||||||  ||| ||||||||| ||||| |||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactt 40957804  T
Q  373 tctcttt 379  Q
    |||||||    
T  40957805 tctcttt 40957811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 394
Target Start/End: Original strand, 45223040 - 45223161
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||||||| |||||||||||||| ||||||| | |  ||| ||||||||||||||||||||| ||||| |  | | ||||||| | || ||    
T  45223040 aagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatattaacctcatacaagcgcattt 45223139  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||||| || ||||||||    
T  45223140 tctctttcatctcatcttctct 45223161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 35137533 - 35137637
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  375 tcttt 379  Q
    |||||    
T  35137633 tcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 394
Target Start/End: Original strand, 41423682 - 41423801
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||||||||| |||| |||||||||| |  ||||||| ||||||||||||||||| ||| ||| || |||||| ||||| || | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||||| || ||||||||    
T  41423782 tctttcatctcctcttctct 41423801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 379
Target Start/End: Original strand, 3694370 - 3694471
Alignment:
Q  278 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 377  Q
    |||||||||||| ||| |||||||||  |||||| |  || ||||| |||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T
Q  378 tt 379  Q
    ||    
T  3694470 tt 3694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 394
Target Start/End: Complemental strand, 35468957 - 35468836
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| |||||||||||||| ||| ||||||||  |||||||| ||| |||||||| | | |||| |||||||| ||   |||| |||||||    
T  35468957 aagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactt 35468858  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||| | || ||||||||    
T  35468857 tctctttcctatcctcttctct 35468836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 38267040 - 38267144
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| ||||| |||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  375 tcttt 379  Q
    |||||    
T  38267140 tcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 4999614 - 4999495
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||| ||| |||||| |  |||||||| |||||||||||||| ||||  ||| ||||| |||  |||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  375 tctttcatttcgtcttctct 394  Q
    ||||| || || ||||||||    
T  4999514 tcttttatctcctcttctct 4999495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 35522881 - 35522980
Alignment:
Q  280 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||||| ||||||||||||| |||| |||||| |  || ||||| ||||||||||||||||||||  ||| ||||||||  |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 380
Target Start/End: Original strand, 22343360 - 22343466
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||| ||| |||| |||  ||||  |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  374 ctctttc 380  Q
    |||||||    
T  22343460 ctctttc 22343466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 380
Target Start/End: Original strand, 41915740 - 41915846
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||| ||| |||||||||| |||||| || ||||||||||||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  374 ctctttc 380  Q
    |||||||    
T  41915840 ctctttc 41915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 394
Target Start/End: Original strand, 18207178 - 18207298
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||||||| |||||||||| |||||| |  |||||||| | |||||||||| |||||||  || ||| | |||| |||| |||||||    
T  18207178 aagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactt 18207276  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||||| || ||||||||    
T  18207277 tctctttcatctcctcttctct 18207298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 16374893 - 16374817
Alignment:
Q  306 aatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 382  Q
    ||||||||| |||||| | |||||||||||||||||||| ||| ||||||| || |||| ||||| |||||||||||    
T  16374893 aatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcat 16374817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 46374902 - 46374833
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    |||| |||||| |||||||||||||||||| || ||| || || ||||| ||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtg 46374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 10343665 - 10343597
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 341  Q
    ||||||||||||| ||||||| |||||||||| ||||||    |||||||| |||||||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 39256023 - 39255905
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||||||| |||||||||| |||||| |  |||| ||| | ||||||||||||||||||  || |||||  ||| ||||  ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtg-gcacgtggactccacacaagaacactttc 39255925  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||||| || ||||||||    
T  39255924 tctttcatctcctcttctct 39255905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 11044186 - 11044236
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacc 323  Q
    ||||||||||||| ||||||| |||||||||| ||||||||| ||||||||    
T  11044186 aagagtaatgatacatagacacccttaggtggcaatacatcctttgacacc 11044236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 340  Q
    |||| |||||| ||| |||| ||||||||| |||||| || |||||||| ||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 21234401 - 21234469
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    |||| |||||| |||||||||||||||||  |||||| || |||||||  |||||||||| ||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgt 21234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 32951592 - 32951489
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 375  Q
    |||||||||| |||||||  ||||| ||  ||||||||| || ||| | |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  376 cttt 379  Q
    ||||    
T  32951492 cttt 32951489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 38044195 - 38044262
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 340  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||| | ||||||||||||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgaca 38044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 380
Target Start/End: Original strand, 8238236 - 8238318
Alignment:
Q  298 taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 380  Q
    ||||||| |||||| || |||||||| |||||||||||||||| ||  |||| |||| |||  ||||  ||||||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttc 8238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 344
Target Start/End: Complemental strand, 46033902 - 46033832
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    ||||| |||||| ||||| || ||||||||| |||||| || || ||||| ||| ||||||||||||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 46033832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 40846213 - 40846152
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatct 336  Q
    |||| |||||| ||| |||||||||||||| |||||| || |||||| | ||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatct 40846152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 49607412 - 49607518
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||| |||| |||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 49607511  T
Q  373 tctcttt 379  Q
    |||||||    
T  49607512 tctcttt 49607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 382
Target Start/End: Complemental strand, 14623939 - 14623832
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| |||||||||||||||||| |||||| || |||||||| ||| |||||||||||| ||| ||||||||| | || |||| |||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  375 tctttcat 382  Q
    ||||||||    
T  14623839 tctttcat 14623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 276 - 382
Target Start/End: Complemental strand, 13898154 - 13898048
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 375  Q
    |||||||||| ||| |||||||||||||| |||||| || |||||||| ||| |||||||||||||||| ||||||||| | || |||| ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  376 ctttcat 382  Q
    |||||||    
T  13898054 ctttcat 13898048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 378
Target Start/End: Complemental strand, 27714993 - 27714888
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| | ||||||||||||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| |||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  373 tctctt 378  Q
    ||||||    
T  27714893 tctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 382
Target Start/End: Original strand, 8956761 - 8956869
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||||||||| |||| ||||||||| |||||||| ||| |||||| ||||||||| ||||||||| |  | |||| |||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  374 ctctttcat 382  Q
    |||||||||    
T  8956861 ctctttcat 8956869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 26141632 - 26141528
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||| |||||||||||||||||||| |||  |||| |||| |||| |||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  375 tcttt 379  Q
    |||||    
T  26141532 tcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 53982011 - 53982115
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  375 tcttt 379  Q
    |||||    
T  53982111 tcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 52629305 - 52629404
Alignment:
Q  280 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 379
Target Start/End: Complemental strand, 54868998 - 54868891
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | ||||| |||  |||||||||||    
T  54868998 taagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 54868899  T
Q  372 ttctcttt 379  Q
    ||||||||    
T  54868898 ttctcttt 54868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 394
Target Start/End: Complemental strand, 25407245 - 25407128
Alignment:
Q  278 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaa-tctgacacgtgatcatgtggatcccatacaatcacactttctc 376  Q
    |||||||| ||| ||| || ||||||| |||| | || |||||||  ||||||||| |||||||||||||||| ||||||||| |||| |||||||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctc 25407146  T
Q  377 tttcatttcgtcttctct 394  Q
    |||||| || ||||||||    
T  25407145 tttcatctcctcttctct 25407128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 33644200 - 33644304
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||| ||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  375 tcttt 379  Q
    |||||    
T  33644300 tcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 11095456 - 11095385
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    |||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||    
T  11095456 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 31456690 - 31456793
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 375  Q
    |||||||||| ||||||| || |||| || |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  376 cttt 379  Q
    ||||    
T  31456790 cttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 17470404 - 17470509
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| | |||||||| |||||| |  || ||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  374 ctcttt 379  Q
    ||||||    
T  17470504 ctcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 20765003 - 20764911
Alignment:
Q  287 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||||||||||||||||||||||||  | || ||||| ||||||||||||||||||||  ||  |||| ||| ||||| ||||||||||||||    
T  20765003 atagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 394
Target Start/End: Complemental strand, 24700055 - 24699935
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| |||||||||||||| ||| |||||| |  |||||||| ||| ||||||||| ||||||  || ||||| ||  ||||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  374 ctctttcatttcgtcttctct 394  Q
    ||||||| | || ||||||||    
T  24699955 ctctttcctctcctcttctct 24699935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 380
Target Start/End: Complemental strand, 33118954 - 33118846
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    ||||||| |||||| ||||||| |||||||||  |||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  | || ||||||    
T  33118954 taagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacact 33118855  T
Q  372 ttctctttc 380  Q
    |||||||||    
T  33118854 ttctctttc 33118846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 382
Target Start/End: Original strand, 35536625 - 35536733
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||||||||| |||| |||||| |  |||||||| ||| |||||| ||||||||| ||||||||| |  | |||| |||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  374 ctctttcat 382  Q
    |||||||||    
T  35536725 ctctttcat 35536733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 35965877 - 35965805
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    |||||||||||||| ||| ||||||||| ||| |||||||||| |||||||| ||| ||||||||||||||||    
T  35965877 taagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtg 35965805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 379
Target Start/End: Complemental strand, 48587187 - 48587087
Alignment:
Q  279 aatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctt 378  Q
    ||||||| ||||| | |||||||||| |||||| || |||||||||||| |||||||||||||||  ||| |||||||||  ||||  ||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  379 t 379  Q
    |    
T  48587087 t 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 394
Target Start/End: Original strand, 8076393 - 8076512
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||| ||| |||||||||| | |||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||| | || ||||||||    
T  8076493 tctttcctctcctcttctct 8076512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 11348024 - 11347953
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    |||||| |||||| |||||||||||||||||  ||||||||| |||||| | ||||||||||||||||||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtg 11347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 41189868 - 41189760
Alignment:
Q  271 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacac 370  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||  |||||||| ||| |||||| |||||||||  ||  |||| |||  |||| |||||    
T  41189868 gtaagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacac 41189769  T
Q  371 tttctcttt 379  Q
    |||||||||    
T  41189768 tttctcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 394
Target Start/End: Original strand, 41080709 - 41080826
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||||||||| || | || ||| || |||||||| || ||||||||||| | ||| ||||||||| |||| |||| |||| ||||    
T  41080709 gagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||||| || ||||||||    
T  41080807 tctttcatctcctcttctct 41080826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 394
Target Start/End: Complemental strand, 21746284 - 21746169
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgaca--cctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||| ||| |||||||||||||| ||||||| | | ||||  || ||||||||||||||||||| |       || ||||||||| ||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacacgtaa-------gaccccatacaagcacact 21746192  T
Q  372 ttctctttcatttcgtcttctct 394  Q
    ||||||||||| || ||||||||    
T  21746191 ttctctttcatctcatcttctct 21746169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 51419460 - 51419391
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    |||| |||||| |||||||||||||| ||  ||||||||| || ||||| ||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtg 51419391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 379
Target Start/End: Original strand, 39670023 - 39670115
Alignment:
Q  287 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    ||||||||||||| |||| |||| |||| |||||| ||| | |||||| ||||||||||||||||||| | | ||||  ||||||| ||||||    
T  39670023 atagacatccttatgtggcaatatatcccttgacatctatataaaaatttgacacgtgatcatgtggacctcgtacacgcacacttcctcttt 39670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 36707526 - 36707456
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    ||||||||||||| ||||| | |||||||||  |||||| || |||||| | |||||||||||||||||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 26754707 - 26754814
Alignment:
Q  287 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcg 386  Q
    ||||||| |||||||||| |||||| || | |||| | |||||||||||||||| ||| |||  |||| |||  |||| |||| |||||||||| | ||     
T  26754707 atagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctctcc 26754806  T
Q  387 tcttctct 394  Q
    ||||||||    
T  26754807 tcttctct 26754814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 378
Target Start/End: Original strand, 35093583 - 35093688
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| | |||| ||||||| | |||||||  |||||| |  |||||| | || ||||||||||||| ||| ||||||| |  |||||||| |||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  373 tctctt 378  Q
    ||||||    
T  35093683 tctctt 35093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 45058652 - 45058548
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| ||| |||||||||||| |||| ||| |||| |||  ||||  | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  375 tctttc 380  Q
    ||||||    
T  45058553 tctttc 45058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 379
Target Start/End: Original strand, 11907367 - 11907475
Alignment:
Q  271 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacac 370  Q
    |||||||| |||||| ||||||| |||||||||  ||||||  | |  ||||  |||||||||||||||| ||| |||| |||| |||  |||| ||||     
T  11907367 gtaagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacat 11907466  T
Q  371 tttctcttt 379  Q
    |||||||||    
T  11907467 tttctcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| |||||||||||||| ||| |||||| |  || ||| | |||||| |||||||||||||  ||| || | |||  |||| |||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  375 tcttt 379  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 394
Target Start/End: Complemental strand, 50052530 - 50052409
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 50052431  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||| | || ||||||||    
T  50052430 tctctttcctctcctcttctct 50052409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 480549 - 480443
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 480450  T
Q  373 tctcttt 379  Q
    |||||||    
T  480449 tctcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 6034044 - 6034148
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||| ||  ||| |||||||||  |||| |||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  375 tcttt 379  Q
    |||||    
T  6034144 tcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 379
Target Start/End: Complemental strand, 48183152 - 48183045
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||||| ||||||| ||||| |||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  48183152 taagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48183053  T
Q  372 ttctcttt 379  Q
    ||||||||    
T  48183052 ttctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 50526271 - 50526152
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||| ||| |||||| ||  |||| ||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  375 tctttcatttcgtcttctct 394  Q
    | |||| | || ||||||||    
T  50526171 tatttcctctcctcttctct 50526152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 42044469 - 42044363
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| ||||||||| |  ||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  42044469 aagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 42044370  T
Q  373 tctcttt 379  Q
    |||||||    
T  42044369 tctcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 394
Target Start/End: Original strand, 29239884 - 29240005
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||| ||||||  ||| ||||| |||| |||| |||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactt 29239983  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||| | || ||||||||    
T  29239984 tctctttcctctcctcttctct 29240005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 11511562 - 11511458
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  375 tcttt 379  Q
    |||||    
T  11511462 tcttt 11511458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacg 342  Q
    |||| |||||| ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 23608232 - 23608354
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||||||||||||| |||||| ||  |||||| |  |||||||| |||||||||||||||||||  ||| ||| |  ||| |||| ||||||    
T  23608232 taagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacact 23608331  T
Q  372 ttctctttcatttcgtcttctct 394  Q
    |||||||| || || ||||||||    
T  23608332 ttctcttttatctcctcttctct 23608354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 29548062 - 29547976
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatccc 358  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||| |||||||| |||||||||||||||| |||  ||| ||||||||    
T  29548062 taagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatccc 29547976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 29977882 - 29977992
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||||| ||| | | || ||||||| |||||| || || ||||| |||||||||||||||||||  |||| |||| |||| |||| ||||||    
T  29977882 taagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacact 29977981  T
Q  372 ttctctttcat 382  Q
    |||||||||||    
T  29977982 ttctctttcat 29977992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 380
Target Start/End: Original strand, 3481654 - 3481759
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| | |||||||| ||||||  | |||||||| ||||||||||||||||| |  ||| ||||| |||| |||| |||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  375 tctttc 380  Q
    ||||||    
T  3481754 tctttc 3481759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 29234346 - 29234241
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| |||||| ||| |||||| || |||| |||| ||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  374 ctcttt 379  Q
    ||||||    
T  29234246 ctcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  375 tcttt 379  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 47104541 - 47104663
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    ||||||||||||||||||||||| ||||| ||  ||||||  |  ||||||| |||||||||| ||||||||| |  | | || |||| |||| ||||||    
T  47104541 taagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacact 47104640  T
Q  372 ttctctttcatttcgtcttctct 394  Q
    ||||||||||| || ||||||||    
T  47104641 ttctctttcatctcctcttctct 47104663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 340  Q
    |||| |||||| ||| |||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 55475188 - 55475256
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 340  Q
    ||||||| |||||| ||| |||||||||||||| |||||| || |||||||| ||||||||||||||||    
T  55475188 taagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 24995209 - 24995103
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||||||||||||| |||| |||||| ||| |||||| || |||||||| ||| |||||| ||||||||  ||| ||||| |||  |||| |||| ||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  373 tctcttt 379  Q
    |||||||    
T  24995109 tctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 380
Target Start/End: Original strand, 47986207 - 47986313
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||| ||| |||||||||| ||||||||| |||||| | |||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  374 ctctttc 380  Q
    |||||||    
T  47986307 ctctttc 47986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 380
Target Start/End: Complemental strand, 50813993 - 50813887
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||| |||  |||||||||||||||| || |||||||| |||||||||||||||| ||| |||| || | |||  ||||  |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  374 ctctttc 380  Q
    |||||||    
T  50813893 ctctttc 50813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 54473633 - 54473529
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  375 tcttt 379  Q
    |||||    
T  54473533 tcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 19670818 - 19670711
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||  |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 19670719  T
Q  373 tctctttc 380  Q
    ||||||||    
T  19670718 tctctttc 19670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 31910192 - 31910258
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 341  Q
    |||| |||||| |||||||||||||||||  ||||||  | |||||||| |||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacac 31910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 17983823 - 17983738
Alignment:
Q  295 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 380  Q
    |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 17983738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 28480318 - 28480249
Alignment:
Q  325 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctct 394  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||| || ||||||||    
T  28480318 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctct 28480249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 28481193 - 28481124
Alignment:
Q  325 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctct 394  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||| || ||||||||    
T  28481193 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctct 28481124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 28482068 - 28481999
Alignment:
Q  325 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctct 394  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||| || ||||||||    
T  28482068 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctct 28481999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 18769103 - 18769040
Alignment:
Q  319 acacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 382  Q
    ||||| |||||||||||||||| ||| ||||||  |||||| |||| |||| ||||||||||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcat 18769040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 379
Target Start/End: Complemental strand, 53352660 - 53352562
Alignment:
Q  280 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||||| ||||||| |||||||||  ||||||| | || |||||||||||||||||||||||||  | | ||||| |||  |||| || |||||||||||    
T  53352660 atgatacatagacacccttaggtgc-aatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 382
Target Start/End: Complemental strand, 31953130 - 31953023
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| |||||||||||||||||| |||||| || |||||||| ||| |||||||||||| ||| ||||||||| | || |||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  375 tctttcat 382  Q
    ||||||||    
T  31953030 tctttcat 31953023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 23128229 - 23128123
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||| |||||||||||||||| | ||| ||| |||||||||| |||||||| |||||||||||||||||||  ||| |||||||||| |||| |||||||    
T  23128229 aagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 23128130  T
Q  373 tctcttt 379  Q
    |||||||    
T  23128129 tctcttt 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 394
Target Start/End: Original strand, 12732480 - 12732601
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| |||||||| |||| |||| |||| |  |||||||||| ||||||||||||||||||||   |||||||||||| | || |||| ||    
T  12732480 aagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattt 12732579  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||||| || ||||||||    
T  12732580 tctctttcatctcctcttctct 12732601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 11427615 - 11427722
Alignment:
Q  274 agagtaatgatatatagacatcct--taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||| ||||||| |||  ||||||| ||||||||| |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  372 ttctcttt 379  Q
    ||||||||    
T  11427715 ttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 17598554 - 17598658
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  375 tcttt 379  Q
    |||||    
T  17598654 tcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 379
Target Start/End: Complemental strand, 28536582 - 28536484
Alignment:
Q  279 aatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctt 378  Q
    ||||||| ||| |||||||||||||| |||||| || |||||||| |||||||||||||||||  | ||||||||| |||| |||| |||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 32869678 - 32869782
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||||| |||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  375 tcttt 379  Q
    |||||    
T  32869778 tcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 9379807 - 9379705
Alignment:
Q  280 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||||| |||||||||||||| ||  ||||||||| |||||||| | |||||||| |||||||||  |||||||||| || |||| |||| |||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T
Q  380 cat 382  Q
    |||    
T  9379707 cat 9379705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 379
Target Start/End: Complemental strand, 22880755 - 22880654
Alignment:
Q  278 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 377  Q
    |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||| ||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  378 tt 379  Q
    ||    
T  22880655 tt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 946377 - 946442
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 341  Q
    ||||| |||| ||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacac 946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 31976247 - 31976352
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| |||||||||||||||||| |||| | || || ||||| |||||||||||||||||||| |||  || | |||  |||| ||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  374 ctcttt 379  Q
    ||||||    
T  31976347 ctcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 380
Target Start/End: Complemental strand, 15990145 - 15990037
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    ||||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||    
T  15990145 taagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 15990046  T
Q  372 ttctctttc 380  Q
    |||||||||    
T  15990045 ttctctttc 15990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 30341462 - 30341355
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 30341363  T
Q  373 tctctttc 380  Q
    ||||||||    
T  30341362 tctctttc 30341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 15508124 - 15508019
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  375 tctttc 380  Q
    ||||||    
T  15508024 tctttc 15508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    ||||||||||  ||||||| |||||||||| |||||| || |||||| | |||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 31110861 - 31110793
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    |||||| |||||| |||||||||||||||||| |||||| || |||||||   ||||||||||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgacac--tcacaaaaatctgacacgt 31110793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 6209567 - 6209461
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| ||||||    |||||||  ||||||||||||| |||||  ||| ||||| |||  || | |||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactt 6209468  T
Q  373 tctcttt 379  Q
    |||||||    
T  6209467 tctcttt 6209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 4231564 - 4231653
Alignment:
Q  291 acatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 380  Q
    ||||| |||||||| |||||| || ||| |||| ||||||||||||||||||||  ||| |||| |||  ||||  ||||||||||||||    
T  4231564 acatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttc 4231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 357
Target Start/End: Original strand, 15832575 - 15832659
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcc 357  Q
    ||||||||||||| ||||||| | |||||||  |||| |||  |||||||| |||||||||| ||||||||  ||| ||||||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcc 15832659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 29857827 - 29857931
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| | |||| ||| |||||| |  || ||||| |||||||||||||||||||  | | |||||||||  | || |||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  375 tcttt 379  Q
    |||||    
T  29857927 tcttt 29857931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 340  Q
    |||||||||||| |||||||||||||||||| |||| |||  |||||||  | |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 9058477 - 9058584
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||    
T  9058477 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 9058576  T
Q  372 ttctcttt 379  Q
    ||||||||    
T  9058577 ttctcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 394
Target Start/End: Complemental strand, 7465836 - 7465716
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| |||||| ||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  374 ctctttcatttcgtcttctct 394  Q
    |||||| || || ||||||||    
T  7465736 ctcttttatctcttcttctct 7465716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 394
Target Start/End: Original strand, 20700813 - 20700934
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||||||||| |||| |||||| || ||||| ||||||||||||||||||||||  ||| ||||| |||  | || |||||||    
T  20700813 aagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactt 20700912  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||| | || ||||||||    
T  20700913 tctctttcctctcctcttctct 20700934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 394
Target Start/End: Complemental strand, 33436202 - 33436081
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactt 33436103  T
Q  373 tctctttcatttcgtcttctct 394  Q
    |||||||| | || ||||||||    
T  33436102 tctctttcctctcatcttctct 33436081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 13438343 - 13438447
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||  ||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  375 tcttt 379  Q
    |||||    
T  13438443 tcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||| ||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| |||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  375 tcttt 379  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 278 - 394
Target Start/End: Original strand, 28863458 - 28863574
Alignment:
Q  278 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 377  Q
    |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  378 ttcatttcgtcttctct 394  Q
    || || || ||||||||    
T  28863558 tttatctcctcttctct 28863574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 276 - 394
Target Start/End: Original strand, 41575138 - 41575257
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatccc-atacaatcacactttc 374  Q
    |||||||||| |||||||||||||| |||||||||| || ||||||   |||||||||| ||||| ||| ||||||||| ||| | |||| |||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||||| || ||||||||    
T  41575238 tctttcatctcctcttctct 41575257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 30915461 - 30915567
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| || ||||| || ||| |||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  373 tctcttt 379  Q
    |||||||    
T  30915561 tctcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 5574589 - 5574484
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| |||||||  ||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| |||||||||  |||| ||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  374 ctcttt 379  Q
    ||||||    
T  5574489 ctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 379
Target Start/End: Complemental strand, 19930917 - 19930816
Alignment:
Q  278 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 377  Q
    |||||||| ||||||| |||||||||| |||||| || |||||| | |||||||||||||||||||  ||||||||| |||  |||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  378 tt 379  Q
    ||    
T  19930817 tt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 40614002 - 40613898
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||  ||  |||| |||  |||| |||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  375 tcttt 379  Q
    |||||    
T  40613902 tcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 40701478 - 40701582
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | ||||| |||  ||||||||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  375 tcttt 379  Q
    |||||    
T  40701578 tcttt 40701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 379
Target Start/End: Complemental strand, 10249485 - 10249378
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 371  Q
    |||||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  10249485 taagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 10249386  T
Q  372 ttctcttt 379  Q
    ||||||||    
T  10249385 ttctcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 17823781 - 17823907
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtga----tcatgtggatcccatacaatca 367  Q
    |||||||||||||| ||| |||||||||||||| ||||||| | |  ||||| ||||||||||||||||||| |      || |||| ||||||||| ||    
T  17823781 taagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgtaactatatatatggaccccatacaagca 17823880  T
Q  368 cactttctctttcatttcgtcttctct 394  Q
    ||||||||||||||| || ||||||||    
T  17823881 cactttctctttcatctcatcttctct 17823907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 380
Target Start/End: Original strand, 27864704 - 27864809
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| ||||| |||| |||||| || |||||| | ||||||||||||||||||| |||| ||||| |||  | || |||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  375 tctttc 380  Q
    ||||||    
T  27864804 tctttc 27864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 33436210 - 33436290
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtgga 354  Q
    |||||||||||| |||||||||||||| ||| |||||| |  |||||||| ||| ||||||||||||||||| ||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtgga 33436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 17820104 - 17819985
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||||||| |  ||||||| |||||| || |||||||| |||||||||||||||| ||| | | ||||| |||| |||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||||| || ||||||||    
T  17820004 tctttcatctcctcttctct 17819985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 45097837 - 45097730
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| |||||||||||||| ||||||||| |||||||| | |||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  45097837 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 45097738  T
Q  373 tctctttc 380  Q
    ||||||||    
T  45097737 tctctttc 45097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 42257191 - 42257297
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||||||||| |||||||| ||||||||  |||||||| ||| ||||||||||||||||  ||  |||| |||  |||| |||||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactt 42257290  T
Q  373 tctcttt 379  Q
    |||||||    
T  42257291 tctcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 2533123 - 2533191
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    ||||| |||||| ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgt 2533191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 375
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  374 ct 375  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 380
Target Start/End: Complemental strand, 26891616 - 26891499
Alignment:
Q  263 tatattaagtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatac 362  Q
    ||||| ||| |||||| |||||| |||| || |||||||||| |||||| || | |||||| |||||||||||||||| ||| ||| ||||| | |  ||    
T  26891616 tatataaagaaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaac 26891517  T
Q  363 aatcacactttctctttc 380  Q
    || |||| ||||||||||    
T  26891516 aagcacattttctctttc 26891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 380
Target Start/End: Original strand, 38732354 - 38732459
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||| ||| ||||| |||  ||||||||| |||||||| |||||||||||||||| ||| |||| |||| |||  ||||  ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  375 tctttc 380  Q
    ||||||    
T  38732454 tctttc 38732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 28381755 - 28381687
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    ||||||||||| ||||||| |||||||||| |||||| |  | |||||| |||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgt 28381687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 38273244 - 38273174
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    |||||| |||||| |||||||| ||||| ||| |||||| || || ||||| |||||||||||||||||||    
T  38273244 aagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgt 38273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 38882915 - 38882846
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    ||||||||||||| ||||||| |||||||||| |||| | || |||||| | |||||||||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 2997567 - 2997482
Alignment:
Q  295 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 380  Q
    |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 2997482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 4060685 - 4060753
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    ||||||||||| ||||||| |||||||||  |||||| |  |||||| | |||||||||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgt 4060753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 3439992 - 3440098
Alignment:
Q  288 tagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgt 387  Q
    |||||| |||||||||| ||||||  | | |||||| |||||||||||| ||| ||||| | ||||| |||  |||| |||| |||||||||| | || |    
T  3439992 tagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttcctctcct 3440091  T
Q  388 cttctct 394  Q
    |||||||    
T  3440092 cttctct 3440098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 36168835 - 36168905
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    ||||| |||||| |||||||||||||| ||  ||||||||| || || || |||||||||| |||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtg 36168905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 13365373 - 13365458
Alignment:
Q  295 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 380  Q
    |||||| ||| |||| | || |||||||| |||||||||||||||| |||| ||| |||| |||  ||||  ||||||||||||||    
T  13365373 ccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttc 13365458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 43490121 - 43490186
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 340  Q
    |||| |||||| ||| ||| |||||||||  |||||| || |||||||| ||||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 27564835 - 27564731
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||| ||||||||||||||||||| |||| ||||| |||  |||| |||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  375 tcttt 379  Q
    |||||    
T  27564735 tcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 47452420 - 47452316
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||||| ||||||  ||| |||||||||  |||| |||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  375 tcttt 379  Q
    |||||    
T  47452320 tcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 394
Target Start/End: Complemental strand, 51898784 - 51898664
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  374 ctctttcatttcgtcttctct 394  Q
    || |||| | || ||||||||    
T  51898684 ctatttcctctcctcttctct 51898664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 3302633 - 3302514
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||| |||||||||||||  |||| || | | |||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  375 tctttcatttcgtcttctct 394  Q
    | |||||| || ||||||||    
T  3302533 tttttcatctcatcttctct 3302514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  375 tcttt 379  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 9474976 - 9474872
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  375 tcttt 379  Q
    |||||    
T  9474876 tcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 2581913 - 2582015
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 2582012  T
Q  373 tct 375  Q
    |||    
T  2582013 tct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 32813245 - 32813351
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| |||||||||||||||||| |||||| || || ||||| |||||||||||||||||||| |||  |||| |||  |||| |||||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactt 32813344  T
Q  373 tctcttt 379  Q
    |||||||    
T  32813345 tctcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 38595152 - 38595258
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||| ||| | |||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 38595251  T
Q  373 tctcttt 379  Q
    |||||||    
T  38595252 tctcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 50630457 - 50630562
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||| | |||||||||| ||||||||| |||  ||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  374 ctcttt 379  Q
    ||||||    
T  50630557 ctcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 37649198 - 37649302
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||||| |||||||| ||||||  | |||||||| |||||||||||||||||||| ||| ||| || ||  |||| |||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  375 tcttt 379  Q
     ||||    
T  37649298 ccttt 37649302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 48716382 - 48716263
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||||||||||  ||| ||||| |||  |||| ||||||||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||  |||| ||||||||    
T  48716282 tcttttctttcctcttctct 48716263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 41608593 - 41608488
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||| |||||||||||||| |||||| || |||||||  |||||||||||||||| |||  ||| |||| ||| |||||  ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  375 tctttc 380  Q
    ||||||    
T  41608493 tctttc 41608488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 379
Target Start/End: Complemental strand, 44548473 - 44548372
Alignment:
Q  278 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 377  Q
    |||||||| ||||||||| |||||||| |||||| |  |||| ||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  378 tt 379  Q
    ||    
T  44548373 tt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| |||||||  |||||| |  ||||||||| |||||||| |||||||||||||||||||  ||| |||||  ||  |||| |||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  375 tcttt 379  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 8346490 - 8346384
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| |||| || | |||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| ||   |||| |||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactt 8346391  T
Q  373 tctcttt 379  Q
    |||||||    
T  8346390 tctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 38632423 - 38632317
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    ||||||||||||| ||||||| |||||||||| |||||| |  || ||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  373 tctcttt 379  Q
    | |||||    
T  38632323 tttcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 394
Target Start/End: Original strand, 44453984 - 44454098
Alignment:
Q  280 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||||| ||||||| | ||| |||| ||||||||  |||| ||| |||||||||||||||| ||| | | |||||||||| |||| |||||||| |||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttcttt 44454083  T
Q  380 catttcgtcttctct 394  Q
    | | || ||||||||    
T  44454084 cctctcatcttctct 44454098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 37926539 - 37926434
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| ||||| ||| |||||||| ||||||||  || ||||| ||| ||||||||||||||||  ||  |||||||| |||||  |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  374 ctcttt 379  Q
    ||||||    
T  37926439 ctcttt 37926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 50591100 - 50590995
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  375 tctttc 380  Q
    ||||||    
T  50591000 tctttc 50590995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 7740732 - 7740852
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    ||||| |||||| || |||| ||||| |||  |||||||||||||||||||||| |||||| |||||||||   ||||||| |||| ||||  | | |||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaaatatatttt 7740831  T
Q  374 ctctttcatttcgtcttctct 394  Q
    || |||||| || ||||||||    
T  7740832 ctttttcatctcctcttctct 7740852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 5959102 - 5958995
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||| ||| ||||| |||| |||||| |  |||||||| |||||||||||||||| ||| |||| |||| |||  ||||  ||||||    
T  5959102 aagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactt 5959003  T
Q  373 tctctttc 380  Q
    ||||||||    
T  5959002 tctctttc 5958995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 23597193 - 23597122
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 344  Q
    ||||||||||||| ||||||||| |||||||| ||||||  | |||| ||| ||| ||||||||||||||||    
T  23597193 aagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 49811630 - 49811559
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 343  Q
    ||||||| |||||| |||||||||||||||||  |||||| |  |||||| | |||||||||||||||||||    
T  49811630 taagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgt 49811559  T

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Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 379
Target Start/End: Original strand, 26440741 - 26440838
Alignment:
Q  282 gatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||| |||||||||||||| ||  |||||| || || ||||| ||||||||||||||||||||  ||  ||||||||  | || ||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttt 26440838  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 41758804 - 41758909
Alignment:
Q  274 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 373  Q
    |||||||||||| ||||||| | |||  ||| |||||| || |||||| | |||||||||||||||||||  |||  |||| |||  |||| ||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  374 ctcttt 379  Q
    ||||||    
T  41758904 ctcttt 41758909  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 394
Target Start/End: Complemental strand, 11152476 - 11152359
Alignment:
Q  276 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 375  Q
    |||||||| | ||||||| |||||||||| |||||| || | |||| | |||||||||||||||||||  |||||| || |||  |||| ||| ||||||    
T  11152476 agtaatgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T
Q  376 ctttcatttcgtcttctct 394  Q
     |||| | || ||||||||    
T  11152377 ttttcctctcctcttctct 11152359  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 13414792 - 13414865
Alignment:
Q  306 aatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 379  Q
    |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||| |||| |||| |||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 341
Target Start/End: Original strand, 26274429 - 26274498
Alignment:
Q  272 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 341  Q
    ||||| |||||||| ||||||| ||||| |||| ||||||||  |||||| | ||| |||||||||||||    
T  26274429 taagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacac 26274498  T

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Target: scaffold1268 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 1029 - 910
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||||| |||||||| |||||| || || ||| | ||||||||| |||||||||  ||| ||| |||||  |||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||| | || ||||||||    
T  929 tctttcctctcctcttctct 910  T

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Target: scaffold1267 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 1029 - 910
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||||| |||||||| |||||| || || ||| | ||||||||| |||||||||  ||| ||| |||||  |||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  375 tctttcatttcgtcttctct 394  Q
    |||||| | || ||||||||    
T  929 tctttcctctcctcttctct 910  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 10211 - 10105
Alignment:
Q  273 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 372  Q
    |||||| |||||| ||||||| | |||||||| ||||||||| |||||| | ||| |||||||||||||||  ||| ||||| | | ||||| |||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactt 10112  T
Q  373 tctcttt 379  Q
    |||||||    
T  10111 tctcttt 10105  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 152518 - 152603
Alignment:
Q  295 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 380  Q
    |||| ||||| |||||| || |||||||| |||||||||||||||| ||| |||| ||||||||  ||||  ||||||||||||||    
T  152518 ccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttc 152603  T

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Target: scaffold0237 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 4029 - 4133
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    ||||||||||| ||||||| | |||| ||| |||||| |  || ||||| |||||||||||||||||||  | | |||||||||  | || |||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  375 tcttt 379  Q
    |||||    
T  4129 tcttt 4133  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 8963 - 8858
Alignment:
Q  275 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 374  Q
    |||| |||||||||||||||||||| |||  ||||||    |||||| |||||||||||| |||||| |  ||| ||||| |||| ||||  ||| ||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  375 tctttc 380  Q
    ||||||    
T  8863 tctttc 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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