View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20764_high_27 (Length: 409)

Name: NF20764_high_27
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20764_high_27
NF20764_high_27
[»] chr7 (47 HSPs)
chr7 (4-196)||(9625111-9625303)
chr7 (196-385)||(9623171-9623361)
chr7 (197-361)||(42515533-42515697)
chr7 (197-355)||(6719067-6719225)
chr7 (197-345)||(2941750-2941899)
chr7 (197-345)||(9124963-9125112)
chr7 (197-345)||(42515096-42515245)
chr7 (197-343)||(13125129-13125276)
chr7 (197-345)||(28495858-28496007)
chr7 (197-355)||(2193251-2193409)
chr7 (201-345)||(11517386-11517530)
chr7 (197-355)||(34405584-34405742)
chr7 (197-310)||(2465772-2465886)
chr7 (196-341)||(35474113-35474259)
chr7 (197-345)||(2611645-2611794)
chr7 (197-341)||(36422260-36422405)
chr7 (197-344)||(28495601-28495749)
chr7 (197-305)||(2465968-2466077)
chr7 (197-345)||(6747591-6747740)
chr7 (197-361)||(46425730-46425894)
chr7 (197-355)||(2189139-2189297)
chr7 (196-345)||(18833290-18833440)
chr7 (196-345)||(25182365-25182515)
chr7 (197-345)||(679821-679969)
chr7 (196-339)||(29357448-29357592)
chr7 (196-325)||(26421752-26421882)
chr7 (214-319)||(31743834-31743940)
chr7 (189-284)||(26421290-26421386)
chr7 (196-361)||(22529227-22529392)
chr7 (196-341)||(36015403-36015549)
chr7 (197-259)||(13122498-13122561)
chr7 (196-361)||(33316716-33316877)
chr7 (200-361)||(35527117-35527278)
chr7 (197-345)||(5406581-5406730)
chr7 (197-284)||(31406577-31406665)
chr7 (235-356)||(29039052-29039172)
chr7 (197-253)||(7646471-7646528)
chr7 (197-283)||(16192385-16192472)
chr7 (196-277)||(7461343-7461424)
chr7 (197-236)||(43776283-43776322)
chr7 (197-250)||(7646514-7646568)
chr7 (249-355)||(26957603-26957708)
chr7 (239-284)||(43233478-43233523)
chr7 (200-299)||(11372501-11372601)
chr7 (202-309)||(20966091-20966199)
chr7 (271-340)||(13124769-13124838)
chr7 (269-309)||(16811912-16811952)
[»] chr4 (56 HSPs)
chr4 (4-196)||(13611943-13612135)
chr4 (196-385)||(13613884-13614074)
chr4 (197-355)||(12691986-12692144)
chr4 (196-361)||(50398979-50399144)
chr4 (197-361)||(50398525-50398689)
chr4 (197-345)||(35871632-35871780)
chr4 (196-345)||(49998640-49998790)
chr4 (197-345)||(44471312-44471461)
chr4 (197-355)||(24629420-24629578)
chr4 (197-345)||(4127876-4128025)
chr4 (197-361)||(51331268-51331432)
chr4 (204-355)||(4127431-4127582)
chr4 (196-355)||(21220317-21220476)
chr4 (197-355)||(23942776-23942934)
chr4 (196-355)||(29628654-29628812)
chr4 (196-361)||(14351784-14351949)
chr4 (201-361)||(9423849-9424009)
chr4 (197-341)||(21067290-21067435)
chr4 (197-355)||(1645736-1645894)
chr4 (197-345)||(31817839-31817988)
chr4 (197-355)||(24628964-24629125)
chr4 (197-283)||(50814812-50814899)
chr4 (207-345)||(14572148-14572286)
chr4 (197-345)||(23350270-23350419)
chr4 (201-300)||(7678613-7678713)
chr4 (197-285)||(44470862-44470950)
chr4 (201-355)||(53996106-53996260)
chr4 (197-285)||(27026567-27026655)
chr4 (197-355)||(3169201-3169359)
chr4 (201-355)||(4185709-4185864)
chr4 (196-345)||(31817384-31817534)
chr4 (197-305)||(14571708-14571817)
chr4 (197-284)||(1464212-1464300)
chr4 (201-284)||(27029342-27029426)
chr4 (197-271)||(15306078-15306153)
chr4 (197-284)||(23943229-23943317)
chr4 (200-282)||(23091501-23091584)
chr4 (235-345)||(8467826-8467936)
chr4 (201-345)||(17029334-17029479)
chr4 (211-356)||(24271552-24271699)
chr4 (192-285)||(17628575-17628669)
chr4 (202-283)||(52048659-52048740)
chr4 (197-280)||(33764929-33765013)
chr4 (197-323)||(21067760-21067884)
chr4 (197-283)||(27578444-27578531)
chr4 (235-362)||(43928989-43929116)
chr4 (246-309)||(53391927-53391990)
chr4 (235-345)||(41869922-41870032)
chr4 (197-285)||(20306151-20306237)
chr4 (239-345)||(17028878-17028984)
chr4 (235-283)||(23976245-23976293)
chr4 (196-282)||(42838690-42838780)
chr4 (202-292)||(4186224-4186315)
chr4 (197-234)||(11828472-11828509)
chr4 (202-286)||(34554492-34554577)
chr4 (197-284)||(27578896-27578984)
[»] chr5 (41 HSPs)
chr5 (196-345)||(3886593-3886743)
chr5 (197-345)||(2473963-2474112)
chr5 (197-355)||(17445448-17445606)
chr5 (200-345)||(189072-189218)
chr5 (192-345)||(22556540-22556694)
chr5 (197-345)||(8642027-8642176)
chr5 (197-355)||(10927396-10927554)
chr5 (197-355)||(34867785-34867943)
chr5 (197-345)||(1821910-1822059)
chr5 (197-356)||(8391315-8391473)
chr5 (197-355)||(10926939-10927097)
chr5 (201-355)||(21886143-21886297)
chr5 (197-341)||(2193824-2193969)
chr5 (197-345)||(2474409-2474558)
chr5 (201-361)||(20039472-20039631)
chr5 (197-355)||(42788639-42788797)
chr5 (192-345)||(22556973-22557127)
chr5 (197-305)||(34371656-34371765)
chr5 (197-305)||(34372112-34372221)
chr5 (197-345)||(3887050-3887199)
chr5 (197-355)||(27646828-27646986)
chr5 (197-345)||(39146943-39147092)
chr5 (197-356)||(30719798-30719957)
chr5 (200-341)||(18304439-18304581)
chr5 (197-355)||(15513005-15513164)
chr5 (197-345)||(30684549-30684698)
chr5 (196-262)||(29680099-29680166)
chr5 (199-284)||(4673466-4673552)
chr5 (197-339)||(24182239-24182381)
chr5 (201-285)||(20858538-20858623)
chr5 (209-300)||(18750201-18750293)
chr5 (197-259)||(11757274-11757337)
chr5 (234-344)||(11160712-11160822)
chr5 (203-283)||(4657992-4658073)
chr5 (269-345)||(22975076-22975152)
chr5 (235-361)||(5066923-5067048)
chr5 (243-356)||(2058696-2058808)
chr5 (235-300)||(42429194-42429259)
chr5 (235-306)||(16370740-16370811)
chr5 (235-345)||(43356652-43356760)
chr5 (197-285)||(32574651-32574740)
[»] scaffold0020 (1 HSPs)
scaffold0020 (197-345)||(107456-107605)
[»] chr3 (40 HSPs)
chr3 (197-345)||(31284269-31284418)
chr3 (197-341)||(28561754-28561899)
chr3 (197-345)||(16811385-16811534)
chr3 (201-341)||(39653172-39653313)
chr3 (197-345)||(41472305-41472453)
chr3 (197-341)||(50347754-50347899)
chr3 (196-337)||(25239069-25239211)
chr3 (197-341)||(11180027-11180172)
chr3 (197-355)||(14813944-14814102)
chr3 (197-306)||(13150547-13150657)
chr3 (196-345)||(39640941-39641091)
chr3 (197-345)||(8067284-8067433)
chr3 (197-345)||(20885110-20885259)
chr3 (197-345)||(25230241-25230390)
chr3 (197-345)||(25237828-25237977)
chr3 (197-345)||(25248115-25248264)
chr3 (197-345)||(27187323-27187472)
chr3 (197-361)||(2911084-2911248)
chr3 (197-341)||(13150092-13150237)
chr3 (197-345)||(30529691-30529840)
chr3 (197-341)||(32227509-32227653)
chr3 (200-345)||(7477195-7477341)
chr3 (200-345)||(7493885-7494031)
chr3 (197-345)||(25230698-25230847)
chr3 (197-345)||(25238285-25238434)
chr3 (197-341)||(32227214-32227359)
chr3 (197-299)||(32386727-32386830)
chr3 (197-285)||(14820218-14820307)
chr3 (197-309)||(25238677-25238790)
chr3 (197-284)||(4067353-4067441)
chr3 (197-355)||(37045030-37045188)
chr3 (196-281)||(25802540-25802626)
chr3 (201-345)||(16810929-16811074)
chr3 (205-361)||(32796936-32797092)
chr3 (197-309)||(29224364-29224477)
chr3 (197-345)||(41474001-41474150)
chr3 (202-283)||(26309987-26310069)
chr3 (197-280)||(25802997-25803081)
chr3 (201-284)||(31103955-31104041)
chr3 (239-281)||(3890046-3890088)
[»] chr1 (41 HSPs)
chr1 (201-345)||(20061188-20061333)
chr1 (197-355)||(20054073-20054231)
chr1 (197-355)||(20054529-20054687)
chr1 (197-355)||(20054985-20055143)
chr1 (197-355)||(20055441-20055599)
chr1 (197-355)||(20055897-20056055)
chr1 (197-355)||(20056353-20056511)
chr1 (197-355)||(20057256-20057414)
chr1 (197-355)||(20845654-20845812)
chr1 (197-355)||(43057516-43057674)
chr1 (196-345)||(50002699-50002849)
chr1 (197-345)||(35759601-35759750)
chr1 (197-345)||(35760907-35761056)
chr1 (204-355)||(50002285-50002436)
chr1 (197-355)||(38340901-38341059)
chr1 (196-345)||(2634928-2635078)
chr1 (197-338)||(20057712-20057854)
chr1 (200-361)||(30872946-30873107)
chr1 (197-355)||(52250201-52250359)
chr1 (197-345)||(16451926-16452075)
chr1 (197-345)||(16461079-16461228)
chr1 (197-355)||(43057058-43057215)
chr1 (197-345)||(46693728-46693878)
chr1 (196-285)||(20056808-20056898)
chr1 (201-285)||(20060337-20060422)
chr1 (196-361)||(12883513-12883678)
chr1 (202-345)||(2328319-2328463)
chr1 (197-299)||(51372867-51372970)
chr1 (198-345)||(31822657-31822805)
chr1 (197-355)||(50003068-50003226)
chr1 (196-338)||(16907245-16907388)
chr1 (200-284)||(12728056-12728142)
chr1 (197-345)||(23180734-23180883)
chr1 (198-371)||(7548070-7548243)
chr1 (197-251)||(52250641-52250696)
chr1 (197-251)||(52250978-52251033)
chr1 (239-355)||(10820587-10820702)
chr1 (201-284)||(16440576-16440660)
chr1 (202-357)||(16410721-16410877)
chr1 (235-356)||(2634459-2634580)
chr1 (217-280)||(31823097-31823161)
[»] chr2 (34 HSPs)
chr2 (197-344)||(30966695-30966843)
chr2 (196-361)||(33174947-33175112)
chr2 (197-345)||(24818330-24818479)
chr2 (197-341)||(16378945-16379090)
chr2 (197-341)||(41754297-41754442)
chr2 (200-355)||(18098874-18099029)
chr2 (197-344)||(30966239-30966387)
chr2 (197-355)||(25434049-25434207)
chr2 (197-341)||(25337990-25338135)
chr2 (197-345)||(29804686-29804835)
chr2 (197-355)||(11388184-11388340)
chr2 (197-345)||(1912529-1912677)
chr2 (196-355)||(16379388-16379547)
chr2 (197-361)||(33174494-33174656)
chr2 (197-345)||(5399810-5399959)
chr2 (197-305)||(8256570-8256679)
chr2 (196-338)||(83028-83171)
chr2 (200-285)||(33771065-33771151)
chr2 (235-356)||(1953149-1953269)
chr2 (197-345)||(29259613-29259762)
chr2 (197-345)||(38898905-38899054)
chr2 (196-338)||(27882918-27883061)
chr2 (197-309)||(11394575-11394686)
chr2 (196-355)||(1707037-1707195)
chr2 (197-345)||(15619902-15620051)
chr2 (197-340)||(30963713-30963857)
chr2 (197-322)||(20502050-20502175)
chr2 (200-284)||(8073957-8074042)
chr2 (239-355)||(18447954-18448069)
chr2 (203-284)||(13191039-13191121)
chr2 (239-285)||(30963299-30963345)
chr2 (197-284)||(30961876-30961964)
chr2 (235-285)||(15639798-15639848)
chr2 (200-237)||(32377712-32377749)
[»] chr8 (40 HSPs)
chr8 (197-355)||(10844878-10845036)
chr8 (197-355)||(22026374-22026532)
chr8 (197-355)||(27925894-27926052)
chr8 (197-345)||(2044062-2044211)
chr8 (196-355)||(41659097-41659256)
chr8 (197-341)||(10844608-10844753)
chr8 (197-341)||(12827247-12827392)
chr8 (197-344)||(17103086-17103234)
chr8 (197-355)||(22548988-22549146)
chr8 (197-355)||(32292392-32292550)
chr8 (197-341)||(22548542-22548687)
chr8 (197-341)||(28453346-28453491)
chr8 (197-345)||(34308472-34308621)
chr8 (197-345)||(8080335-8080484)
chr8 (197-285)||(25144836-25144925)
chr8 (197-309)||(25147576-25147689)
chr8 (197-345)||(27022331-27022480)
chr8 (196-356)||(27819238-27819398)
chr8 (197-345)||(34308928-34309081)
chr8 (188-338)||(28375038-28375189)
chr8 (197-345)||(6464903-6465052)
chr8 (197-339)||(25147977-25148120)
chr8 (197-309)||(12100731-12100844)
chr8 (201-337)||(21316106-21316243)
chr8 (205-345)||(22840530-22840671)
chr8 (197-339)||(33852251-33852394)
chr8 (197-285)||(41913034-41913123)
chr8 (235-339)||(27021911-27022015)
chr8 (197-350)||(3745100-3745254)
chr8 (196-336)||(1297020-1297161)
chr8 (202-309)||(15819014-15819121)
chr8 (201-271)||(31283648-31283719)
chr8 (196-345)||(15567548-15567698)
chr8 (201-284)||(30527479-30527563)
chr8 (200-330)||(3744657-3744788)
chr8 (239-340)||(22705181-22705282)
chr8 (200-260)||(25307855-25307914)
chr8 (235-284)||(30334940-30334989)
chr8 (239-284)||(6466775-6466820)
chr8 (239-284)||(15568041-15568086)
[»] scaffold0018 (1 HSPs)
scaffold0018 (197-345)||(10304-10453)
[»] chr6 (42 HSPs)
chr6 (197-361)||(20896681-20896845)
chr6 (197-343)||(13492795-13492942)
chr6 (197-361)||(6330905-6331069)
chr6 (197-345)||(16519972-16520121)
chr6 (197-345)||(17027524-17027673)
chr6 (197-361)||(17850907-17851071)
chr6 (197-355)||(20850316-20850474)
chr6 (202-355)||(3652481-3652634)
chr6 (203-345)||(7911882-7912025)
chr6 (197-371)||(20126175-20126351)
chr6 (197-345)||(7912314-7912463)
chr6 (197-345)||(9352066-9352215)
chr6 (197-305)||(13191506-13191615)
chr6 (197-285)||(13492396-13492485)
chr6 (197-345)||(17731102-17731255)
chr6 (210-341)||(27334169-27334301)
chr6 (210-341)||(27394909-27395041)
chr6 (197-355)||(2681209-2681367)
chr6 (201-355)||(23986314-23986468)
chr6 (201-354)||(9440306-9440459)
chr6 (196-285)||(15929646-15929736)
chr6 (197-361)||(17851363-17851527)
chr6 (201-341)||(2720560-2720702)
chr6 (216-361)||(31821704-31821849)
chr6 (197-309)||(11062325-11062438)
chr6 (201-285)||(20735759-20735844)
chr6 (197-339)||(21311981-21312124)
chr6 (197-345)||(21311519-21311668)
chr6 (198-341)||(23776449-23776592)
chr6 (197-323)||(2890832-2890959)
chr6 (201-341)||(14771716-14771857)
chr6 (201-285)||(28583027-28583112)
chr6 (200-345)||(28065831-28065980)
chr6 (196-319)||(9440849-9440973)
chr6 (211-285)||(15929263-15929338)
chr6 (209-283)||(17205405-17205479)
chr6 (197-250)||(28780209-28780263)
chr6 (268-345)||(9440493-9440570)
chr6 (202-285)||(1991617-1991701)
chr6 (239-345)||(32292889-32292995)
chr6 (196-300)||(33774994-33775101)
chr6 (201-285)||(20732642-20732727)
[»] scaffold0499 (1 HSPs)
scaffold0499 (197-339)||(2044-2187)
[»] scaffold0322 (1 HSPs)
scaffold0322 (197-345)||(18970-19119)
[»] scaffold0047 (2 HSPs)
scaffold0047 (197-345)||(18128-18276)
scaffold0047 (197-345)||(17591-17740)
[»] scaffold0168 (1 HSPs)
scaffold0168 (197-345)||(2746-2895)
[»] scaffold0024 (1 HSPs)
scaffold0024 (197-345)||(105724-105873)
[»] scaffold0022 (4 HSPs)
scaffold0022 (197-345)||(162671-162820)
scaffold0022 (203-309)||(69814-69921)
scaffold0022 (197-253)||(163167-163224)
scaffold0022 (197-250)||(163127-163181)
[»] scaffold0243 (1 HSPs)
scaffold0243 (197-355)||(1215-1373)
[»] scaffold0040 (1 HSPs)
scaffold0040 (197-345)||(2203-2352)
[»] scaffold0333 (2 HSPs)
scaffold0333 (201-355)||(4556-4710)
scaffold0333 (197-279)||(5091-5174)
[»] scaffold0007 (1 HSPs)
scaffold0007 (235-345)||(142306-142416)
[»] scaffold0002 (1 HSPs)
scaffold0002 (197-341)||(154765-154910)
[»] scaffold0005 (2 HSPs)
scaffold0005 (207-345)||(245090-245228)
scaffold0005 (197-305)||(245559-245668)
[»] scaffold0389 (1 HSPs)
scaffold0389 (197-262)||(13526-13592)
[»] scaffold0664 (1 HSPs)
scaffold0664 (215-339)||(3993-4118)
[»] scaffold0088 (1 HSPs)
scaffold0088 (237-355)||(23668-23785)
[»] scaffold0557 (1 HSPs)
scaffold0557 (200-300)||(2154-2255)
[»] scaffold0391 (1 HSPs)
scaffold0391 (200-293)||(14797-14891)
[»] scaffold0277 (1 HSPs)
scaffold0277 (197-250)||(14695-14749)
[»] scaffold0036 (1 HSPs)
scaffold0036 (209-355)||(26064-26211)


Alignment Details
Target: chr7 (Bit Score: 181; Significance: 1e-97; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 9625303 - 9625111
Alignment:
Q  4 ctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcggttctctagctgaacttttt 103  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  9625303 ctaacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcggttctctagctgaagttttt 9625204  T
Q  104 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9625203 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 9625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 196 - 385
Target Start/End: Complemental strand, 9623361 - 9623171
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9623361 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 9623262  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatc 385  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| ||  ||||||||||| |||  |||||||||||||||||||||||||    
T  9623261 ccatggagtctcatgcatgcacaacctctggatccctctcattcc-attgtgattcggtttatctaaaagttgtcaggtaccactcattatc 9623171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 42515697 - 42515533
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  42515697 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagccttccttcaa 42515598  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||||||| | | |||| |||||| ||||||||||||| |||| |||||||||| |||||    
T  42515597 ccatgtagtctcatacctacacggcctcaggatccctctcattctgatg-tgattcggttcgtcta 42515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 6719067 - 6719225
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |    
T  6719067 cacgcttaactctggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttcaa 6719166  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | |||  |||||| |||||||||||||| ||| ||||||||||    
T  6719167 ccatgtagtcccatacctacacagcctcaggatccctctcattccaatg-tgattcggtt 6719225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 2941750 - 2941899
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  2941750 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagccttccttcaa 2941849  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | || ||| |||||| ||||||||||||| |||||    
T  2941850 ccatgcagtcccatacctgtacggcctcaggatccctctcattctgatgt 2941899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 9125112 - 9124963
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||  |    
T  9125112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttcctttaa 9125013  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||  |||||||| | |||||| |||||  ||| |||||||||||||||    
T  9125012 ccatacagtctcatacctgcacggcctcaagatctctctcattccgatgt 9124963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 42515245 - 42515096
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  42515245 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 42515146  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
     |||| |||||||| | |||||| |||||| |||||||||||||||||||    
T  42515145 tcatgcagtctcatacctgcacggcctcaggatccctctcattccgatgt 42515096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 343
Target Start/End: Original strand, 13125129 - 13125276
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  13125129 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 13125228  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgat 343  Q
    ||||| |||| ||| | |||| | |||||  |||||||||||||||||    
T  13125229 ccatgcagtcccatacctgcagggcctcaagatccctctcattccgat 13125276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 28496007 - 28495858
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | |||| |||||||||||  |||||| |    
T  28496007 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagccttccttcaa 28495908  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | |||| |||||  |||||||||||||||||||    
T  28495907 ccatgtagtcccatacctacacggcctcaagatccctctcattccgatgt 28495858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 2193409 - 2193251
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2193409 cacgcttaactgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2193310  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | ||||||  ||||| | ||||||||||||| || ||||||||||    
T  2193309 ccatgcagtcccatacctgcacggtctcaggaaccctctcattccggtg-tgattcggtt 2193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 201 - 345
Target Start/End: Original strand, 11517386 - 11517530
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||    
T  11517386 cttaactgcggagttcttatggaatgagctaccgaaaagtagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttc-accat 11517484  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    | |||| ||| | || ||| |||||| |||||||||||||||||||    
T  11517485 gcagtcccatacctgtacggcctcaggatccctctcattccgatgt 11517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 34405584 - 34405742
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  34405584 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagccttccttcaa 34405683  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | || | ||| || ||||||||||||||| || ||||||||||    
T  34405684 ccatgtagtcccatacctacaaggccttaggatccctctcattccggtg-tgattcggtt 34405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 197 - 310
Target Start/End: Complemental strand, 2465886 - 2465772
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2465886 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465787  T
Q  296 ccatggagtctcatg 310  Q
    ||||| |||| ||||    
T  2465786 ccatgtagtcccatg 2465772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 35474113 - 35474259
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| || |||  ||||||||||||||||   | ||||     
T  35474113 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataagtagtactaaacaattcttataagtctttcttca 35474212  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    |||||| |||||||| | | |||||||| || |||||||||||||||    
T  35474213 accatgtagtctcatacctacacgacctaaggatccctctcattccg 35474259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 2611645 - 2611794
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||| ||||| | ||| ||||||||||||||||||  |||||| |    
T  2611645 cacgcttaactatggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagccttccttcca 2611744  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||  |||||||| | | || |||||||| | |||||||||||||||||    
T  2611745 ccatatagtctcatacctacatgacctcaggacccctctcattccgatgt 2611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 36422405 - 36422260
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  36422405 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 36422306  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | | || | ||| || |||||||||||||||    
T  36422305 ccatgtagtcccatacctacaaggccttaggatccctctcattccg 36422260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 197 - 344
Target Start/End: Original strand, 28495601 - 28495749
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||   |   |||||||||||||||   |||||| |    
T  28495601 cacgcttaactgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatataggtaaaactcaacaattcttataagtcttccttcaa 28495700  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 344  Q
    ||||| |||| ||| | | ||||||||||| ||||||||||||||||||    
T  28495701 ccatgtagtcccatacctacacgacctcaggatccctctcattccgatg 28495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 2466077 - 2465968
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2466077 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465978  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  2465977 ccatgtagtc 2465968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 6747591 - 6747740
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  6747591 cacgcttaactgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 6747690  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| ||| |||| | | |||| |||||| |||||||||||||| ||||    
T  6747691 ccatgtagtatcatacctacacggcctcaggatccctctcattccaatgt 6747740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 46425894 - 46425730
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||  || ||||||||||||||||||  |  ||| |    
T  46425894 cacgcttaactgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagccttatttcaa 46425795  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||| ||| | | || |  ||||| |||||||||||||||||| |||||||| |||||||    
T  46425794 ccatgtagtcccatacctacatggtctcaggatccctctcattccgatg-tgattcggcttgtcta 46425730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 2189297 - 2189139
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||  || ||| |    
T  2189297 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagccttctttcaa 2189198  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||  | |||||  |||||| | ||||||||||||| || ||||||||||    
T  2189197 ccatgcagtcccacacctgcacagcctcaggaaccctctcattccggtg-tgattcggtt 2189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 18833440 - 18833290
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||| |||||||  ||| ||     
T  18833440 acacgcttaactgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagctttccctca 18833341  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||  ||| | || ||| |||||| | |||||||||||||||||    
T  18833340 accatgcagttccatacctgtacggcctcaggaaccctctcattccgatgt 18833290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 25182515 - 25182365
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| |||||||||| ||||||||| ||||||| ||||||||  |||||| ||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  25182515 acacacttaactgtgaagttcttatggaatgagttaccgaaaataagatgtatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 25182416  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||||||| | |||||   ||||| ||| |||||||||||||||    
T  25182415 accatgcagtctcatacttgcacagtctcaggatctctctcattccgatgt 25182365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 679969 - 679821
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||||||||||| ||| | ||||||||||||||||  ||||||      
T  679969 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatataggtagta-ccaacaattcttataagccttccttcag 679871  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| | || ||| | | ||||||||||| ||||||||||||| |||||    
T  679870 ccatgtactcccatacctacacgacctcaggatccctctcattctgatgt 679821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 29357448 - 29357592
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||| ||||||||| |||||||||  || | |||| ||||| ||||||||||||||||||||||| | ||| |||||||||||||||| || ||||||     
T  29357448 acacggttaactgtgtagttcttatgaaacgggctatcgaaaagaagatgcatcttgttgatatagttagtaccaaacaattcttataaacattccttca 29357547  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattc 339  Q
    |||||| |||| ||| | ||||||||||| | || ||||||||||    
T  29357548 accatgcagtcccatacctgcacgacctcgggatacctctcattc 29357592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 26421752 - 26421882
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||| ||||||  ||| | |||||||||||| |||  | ||||     
T  26421752 acacgcttaactgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtatagggagtacctaacaattcttatgagccttacttca 26421851  T
Q  295 accatggagtctcatgcatgcacgacctcag 325  Q
    |||||| |||||||| |||||||| ||||||    
T  26421852 accatgcagtctcatacatgcacggcctcag 26421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 31743834 - 31743940
Alignment:
Q  214 ttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgca 312  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||| | | | ||||| ||||||||||||| |||||| |||||| ||||||||||     
T  31743834 ttcttatggaatgggctaccgaaaagaagatgcatcttgttgatatagatagcaccaaaccattcttataagcattccttcaaccatgcagtctcatgct 31743933  T
Q  313 tgcacga 319  Q
    |||||||    
T  31743934 tgcacga 31743940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 26421290 - 26421386
Alignment:
Q  189 aattcagacacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||| ||||| ||||||||||||||||||| |||||  ||||||||| ||  ||||||||||||||||||||| ||||||| |||||||||||||    
T  26421290 aattcaaacacgtttaactgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataag 26421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 361
Target Start/End: Original strand, 22529227 - 22529392
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||| ||||||| |  |||||| ||| |||| |||||||||||||||| |||||| | ||| |||||| |||||||||||  ||||||     
T  22529227 acacgcttaactgtgaagttcttttgtaatgagttactgaaaagaagatgcatcttgtttatatagatagtaccaaacatttcttataagccttccttca 22529326  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    |||||| || | ||| | | || |||||||| ||||||||||||| |||  |||||||||| |||||    
T  22529327 accatgtaggcccatacttacatgacctcaggatccctctcattcggat-atgattcggttcgtcta 22529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 36015403 - 36015549
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||| ||||||||| ||||||||| ||||| ||||   ||| ||||| |||||||||||||||| || ||| |||||||||||| |||||  ||||||     
T  36015403 acacgtttaactgtgaagttcttatggaatgggctatttaaaagaagaggcatcttgttgatatatgtagtaccaaacaattcttttaagctttccttca 36015502  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||||||||||||| | |||||  |||  | |||||||||||||||    
T  36015503 accatggagtctcatacttgcactgccttgggatccctctcattccg 36015549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 13122498 - 13122561
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 259  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  13122498 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 13122561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 361
Target Start/End: Complemental strand, 33316877 - 33316716
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||| |||| ||||||||||||||||  || ||||||||||  |||  ||||||||||||||| ||  | |||||||||||||||||    |||||| |    
T  33316877 acacgtttaattgtggagttcttatagtttgggctaccgaaa--aga--catcttgttgatataagtattgtcaaacaattcttataatttttccttcaa 33316782  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||||||| | |||||||| ||| |||   |||||||||||||| ||||| |||||||||    
T  33316781 ccatgtagtctcatacctgcacgacatcaaaatttatctcattccgatgtggattcagtttgtcta 33316716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 361
Target Start/End: Original strand, 35527117 - 35527278
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    ||||||||||||||||| ||| |||||  |||| |||| ||| ||||||||||||||||||||| | | ||||||||||||||||||  || ||| ||||    
T  35527117 gcttaactgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagccttctttcaacca 35527216  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
       |||| |||   ||||||||||| | |||||||||||| || || |||||||||| |||||    
T  35527217 accagtcccatatttgcacgacctcgggatccctctcatttcggtg-tgattcggttcgtcta 35527278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 5406581 - 5406730
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |  || || ||| |||  ||||||||||||||||||||||||  || ||||||||||||||||    |||||| |    
T  5406581 cacgcttaactgtggagttcttatggtttgggcaaccaaaaataagatgcatcttgttgatataggtaataccaaacaattcttataaatcttccttcaa 5406680  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| |  ||||||| | || |||||| ||||||||||||    
T  5406681 ccatgcagtcccataccggcacgactttaggatccctatcattccgatgt 5406730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 31406577 - 31406665
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||||||  || | |||||||||| |||||||||||||||||||||||||   | ||||||||||| |||||    
T  31406577 cacgcttaactgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataag 31406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 356
Target Start/End: Original strand, 29039052 - 29039172
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc-ttctaccatggagtctcatgcatgcacgacctcagaatccctc 333  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||| ||||| |||| ||| |||||| |||| |||   | |||| |||||| || ||||    
T  29039052 aaagaagatgcatgttgttgatataggtagtaccaaacaattcttgtaagc-ctccattcaaccatgtagtcacatatctacacggcctcaggatgcctc 29039150  T
Q  334 tcattccgatgttgattcggttt 356  Q
    ||||||||||| |||||||||||    
T  29039151 tcattccgatg-tgattcggttt 29039172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 7646471 - 7646528
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 253  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  7646471 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtt 7646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 16192472 - 16192385
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    ||||||| |||||  ||||||||| ||||| |||||| ||| ||||||||||||||||||| |||||  || ||||||||||||||||    
T  16192472 cacgcttcactgtatagttcttatggaatgggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaattcttataa 16192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 7461343 - 7461424
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattc 277  Q
    |||||||||||||| |||||||||| |||||| ||||| ||| ||||||| |||||||| |||||| | ||||||||||||||    
T  7461343 acacgcttaactgtagagttcttat-gaatgaactaccaaaaagaagatgtatcttgtttatatagttagtatcaaacaattc 7461424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 43776283 - 43776322
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaa 236  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43776283 cacgcttaactgtggagttcttatggaatgagctaccgaa 43776322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 7646568 - 7646514
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  7646568 cacgcttaactgtggagttcttatggaatgagttaccgaaaacaagatgcatctt 7646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 26957603 - 26957708
Alignment:
Q  249 ttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttga 348  Q
    |||||||||||||| ||| ||||||||||||||||||  || ||| |||||| |||  ||| | | |||  |||||  |||||||||||||||||| |||    
T  26957603 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatg-tga 26957701  T
Q  349 ttcggtt 355  Q
    |||||||    
T  26957702 ttcggtt 26957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 43233523 - 43233478
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||    
T  43233523 aagatgcatcttgttgatatagatagtaccaaacaattcttataag 43233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 11372601 - 11372501
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||||| |||||||||||| |  ||||||||| |||  || ||||||| ||||| || |||| ||| ||||||||||||||||||  |||||| ||||    
T  11372601 gcttaactttggagttcttatggtttgagctaccaaaaataacatgcatcatgttggtacaggtagtaccaaacaattcttataagccttccttcaacca 11372502  T
Q  299 t 299  Q
    |    
T  11372501 t 11372501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 20966199 - 20966091
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||| ||||||||| ||||||||||||| ||| || || |||||||||| |||||||  ||  ||| ||||||||||||   |||||| | ||||    
T  20966199 ttaactgtgaagttcttatggaatgagctaccgaaaataatatacatcttgttggtataggtattacaaaataattcttataagtcatccttcaatcatg 20966100  T
Q  301 gagtctcat 309  Q
     ||||||||    
T  20966099 cagtctcat 20966091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 13124769 - 13124838
Alignment:
Q  271 acaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattcc 340  Q
    |||||||||||||||  |||||| |||||| |||| ||| | |||||| |||||  ||||||||||||||    
T  13124769 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattcc 13124838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 16811912 - 16811952
Alignment:
Q  269 aaacaattcttataagcactccttctaccatggagtctcat 309  Q
    |||||||||||||||||| |||||| |||||| ||||||||    
T  16811912 aaacaattcttataagcattccttcaaccatgtagtctcat 16811952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 1e-97; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 13611943 - 13612135
Alignment:
Q  4 ctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcggttctctagctgaacttttt 103  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  13611943 ctaacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcggttctctagctgaagttttt 13612042  T
Q  104 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13612043 ctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcacagtagaattcaga 13612135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 196 - 385
Target Start/End: Original strand, 13613884 - 13614074
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13613884 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 13613983  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatc 385  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| ||  ||||||||||| |||  |||||||||||||||||||||||||    
T  13613984 ccatggagtctcatgcatgcacaacctctggatccctctcattcc-attgtgattcggtttatctaaaagttgtcaggtaccactcattatc 13614074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 12691986 - 12692144
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  12691986 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 12692085  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  12692086 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 12692144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 361
Target Start/End: Original strand, 50398979 - 50399144
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50398979 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttataagccttccttca 50399078  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    |||||| | |||||| | | ||||  ||||| |||||||||||||||||| |||||||| |||||||    
T  50399079 accatgtaatctcatacctacacggtctcaggatccctctcattccgatg-tgattcggcttgtcta 50399144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 197 - 361
Target Start/End: Original strand, 50398525 - 50398689
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  50398525 cacgcttaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 50398624  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| ||||  || | | |||| |||||| |||||||||||||||||| |||||||| |||||||    
T  50398625 ccatgtagtcctatacctacacggcctcaggatccctctcattccgatg-tgattcggcttgtcta 50398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 35871780 - 35871632
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||| |||||||  |||||| ||    
T  35871780 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaaatgcatcttgttgatataggtggtaccaaacaattcatataagccttccttcaac 35871681  T
Q  297 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  35871680 catgaagtcccatacctgtacggcctcaggatccctctcattccgatgt 35871632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 49998790 - 49998640
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  49998790 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 49998691  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||| ||||| | |||  ||| || |||||||||||||||||||    
T  49998690 accatgcagtcccatgcctacacagccttaggatccctctcattccgatgt 49998640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 44471312 - 44471461
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  44471312 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 44471411  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | || ||| |||||  ||| |||||||||||||||    
T  44471412 ccatgtagtctcatacctgtacggcctcaagatctctctcattccgatgt 44471461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 24629420 - 24629578
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  |    
T  24629420 cacgcttaactgtggaattcttatggaacgaggtaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattcctttaa 24629519  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | ||||||||||| | ||||||||||||| || ||||||||||    
T  24629520 ccatgcagtcccatacctacacgacctcaggaaccctctcattccggtg-tgattcggtt 24629578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 4127876 - 4128025
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || ||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  4127876 cacgcttaactctgaagttcttatggaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 4127975  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||  |||||||||| | || | |||||| |||||||||||||||||||    
T  4127976 ccatatagtctcatgcctacatggcctcaggatccctctcattccgatgt 4128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 361
Target Start/End: Original strand, 51331268 - 51331432
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  51331268 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 51331367  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| |||||||| |||||||    
T  51331368 ccatgtagtcccatacctacacggcctcatgattcctctcattccgatg-tgattcggcttgtcta 51331432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 355
Target Start/End: Original strand, 4127431 - 4127582
Alignment:
Q  204 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgga 302  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| || ||| |    
T  4127431 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgta 4127530  T
Q  303 gtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||| ||| | | || | |||||| |||||||||||||||||| ||||||||||    
T  4127531 gtcccatacctacatggcctcaggatccctctcattccgatg-tgattcggtt 4127582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 196 - 355
Target Start/End: Original strand, 21220317 - 21220476
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||     
T  21220317 acacgcttaactgtgtagttcttatagaatgagttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttca 21220416  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    |||||  ||| |||| | | || | |||||  ||||||||||||| |||| ||||||||||    
T  21220417 accatatagtttcatacctacatggcctcatgatccctctcattctgatg-tgattcggtt 21220476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 23942776 - 23942934
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  23942776 cacgcttaactgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 23942875  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||  ||| | | |||| || ||| |||||||||||||||||| ||||||||||    
T  23942876 ccatgtagttccatacctacacggccccaggatccctctcattccgatg-tgattcggtt 23942934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 196 - 355
Target Start/End: Original strand, 29628654 - 29628812
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||| ||||| |||||| ||  ||||  |||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  29628654 acacgcttaactgtggagttcttatggaatgggctaccaaacaaagacacatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 29628753  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||||||| | | |||| |||||| |||||||||||| ||||| ||||||||||    
T  29628754 ccatgtagtctcatacctacacggcctcaggatccctctcatttcgatg-tgattcggtt 29628812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 196 - 361
Target Start/End: Complemental strand, 14351949 - 14351784
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| ||||  | |||| ||| ||||||||||||||||||||||| | ||| |||| || ||||| ||||  ||||||     
T  14351949 acacgcttaactgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatatagatagtaccaaaaaactcttacaagccttccttca 14351850  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    |||||| || ||||| ||||||||||||||| ||||||||||||| | || ||||||||||||||||    
T  14351849 accatgcagactcatacatgcacgacctcaggatccctctcattctggtg-tgattcggtttgtcta 14351784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 201 - 361
Target Start/End: Original strand, 9423849 - 9424009
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||| |||| | ||||||| ||||| |||||  ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||  || ||| |||||    
T  9423849 cttaattgtgaaattcttatggaatgggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttctttcaaccat 9423948  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    | |||| ||| ||||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  9423949 gcagtcccatacatgcacgacctcaggatccctctcattccggtg-tgattcggttcgtcta 9424009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 21067435 - 21067290
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| || ||| |||| |||| |||| ||   |||||| |    
T  21067435 cacgcttaattgtggagtacttttagaatgagctaccggaaagaagatgcatcttgttgatatatgtagtaccaaataattattattagtcttccttcaa 21067336  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||||||| ||||||||||||| | |||||||||||||||    
T  21067335 ccatgcagtctcatacatgcacgacctcgggatccctctcattccg 21067290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 1645736 - 1645894
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||  || |||||||||||||||||   |||||| |    
T  1645736 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagtcttccttcaa 1645835  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| ||||||||||    
T  1645836 ccatgtagtcccatacctacacggcctcaagattcctctcattccgatg-tgattcggtt 1645894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 31817839 - 31817988
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || |||||||||  ||||  ||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||||||||  |||||| |    
T  31817839 cacgcttaactatgaagttcttatgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagccttccttcaa 31817938  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| |||||| ||||||| ||||||||| ||||||||||    
T  31817939 ccatgcagtcccatacatgcatgacctcataatccctcttattccgatgt 31817988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 24628964 - 24629125
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc---actcctt 292  Q
    |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||   | |||||    
T  24628964 cacgcttaactgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctaattcctt 24629063  T
Q  293 ctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
      |||||| |||| ||| | | |||| |||||| | ||||||||||||| || ||||||||||    
T  24629064 taaccatgcagtcccatacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 24629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 50814812 - 50814899
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  50814812 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 14572148 - 14572286
Alignment:
Q  207 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 306  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||| |||||| ||||     
T  14572148 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcc 14572247  T
Q  307 catgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||| | | || | |||||| |||||||||||||||||||    
T  14572248 catacctacatggcctcaggatccctctcattccgatgt 14572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 23350270 - 23350419
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  23350270 cacgcttaactatgaagttcttatggaaggagctaccgaaaagaagatgcatcttgttgatataggaagtaccaaacaattcttataagccttccttcaa 23350369  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| | | | || ||| |||||  ||| |||||||||||||||    
T  23350370 ccatgcagtcccctacctgtacggcctcaagatctctctcattccgatgt 23350419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 7678613 - 7678713
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |||||    
T  7678613 cttaactgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccat 7678712  T
Q  300 g 300  Q
    |    
T  7678713 g 7678713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 44470862 - 44470950
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||||||| |||  | |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  44470862 cacgcttaactgtggagttcttatggaatgagttacgaacagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 44470950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 355
Target Start/End: Original strand, 53996106 - 53996260
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||| |||||| |||||    
T  53996106 cttaactgtggagttcttatggaatgagataccaaaaagaagatgaatcttgttgatataggtagtaccaaacaatttttataagcattccttcaaccat 53996205  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    | |||| |||   | ||   |||||| |||| ||||||||||||| ||||||||||    
T  53996206 gtagtcccatatctacatagcctcaggatccttctcattccgatg-tgattcggtt 53996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 27026655 - 27026567
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||  | ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  27026655 cacgcttaactacgtagttcttatggaatgggctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagc 27026567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 3169359 - 3169201
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| || || | |||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||   |||||| |    
T  3169359 cacgcttaagtgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagtcttccttcaa 3169260  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| ||||||||||    
T  3169259 ccatgtagtcccatacctacacggcctcatgattcctctcattccgatg-tgattcggtt 3169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 201 - 355
Target Start/End: Complemental strand, 4185864 - 4185709
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||| | | |||||  |||||    
T  4185864 cttaactgtagagttcttgtagaatgagctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttatatgtattcctttaaccat 4185765  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    |  ||||||| | |||| | |||||  | ||||||||||  |||||  ||||||||    
T  4185764 gccgtctcatacctgcatggcctcatgaaccctctcattttgatgtgaattcggtt 4185709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 345
Target Start/End: Original strand, 31817384 - 31817534
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||| ||| |||||||||  ||||| ||| | |||| |||||||||| |||||| ||||||| ||| ||||||||| |||||| |  ||||||     
T  31817384 acacgcttaattgtagagttcttaaggaatgggctgcggaaaagaagatgcattttgttggtataggtagtaccaaacaattattataaacgttccttca 31817483  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||||||| ||||||||||||||  |||||||| ||| ||||||    
T  31817484 accatgaagtctcatacatgcacgacctcatgatccctcttatttcgatgt 31817534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 14571708 - 14571817
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  14571708 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 14571807  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  14571808 ccatgaagtc 14571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 1464300 - 1464212
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||| || |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1464300 cacgctaaattgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 1464212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 27029426 - 27029342
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| || ||| |||| ||||||||||||    
T  27029426 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataag 27029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 15306078 - 15306153
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 271  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  15306078 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaa 15306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 23943229 - 23943317
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| | || |||||||    
T  23943229 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaatattttttataag 23943317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 23091501 - 23091584
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttata 282  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| || ||| ||||||||| |||||    
T  23091501 gcttaactgtggagtttttatagaataagctaccagaaagaagatgcatcttgttaatatatgtagtaccaaacaatttttata 23091584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 345
Target Start/End: Original strand, 8467826 - 8467936
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||   |||||| |||||| |||||||| | |||||   ||||| |||||| |    
T  8467826 aaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggatcccttt 8467925  T
Q  335 cattccgatgt 345  Q
    ||||| |||||    
T  8467926 cattctgatgt 8467936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 345
Target Start/End: Complemental strand, 17029479 - 17029334
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| |||| || |||| |||| || ||||||||||||||||||||| |||  |||||||| ||| |||   || ||| || ||    
T  17029479 cttaactgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatataggtagtactaaacaattattacaagtcttcattcaactat 17029380  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    | |||| ||| | |||||||||||   |||||||||||||||||||    
T  17029379 gcagtcccatacttgcacgacctctagatccctctcattccgatgt 17029334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 356
Target Start/End: Original strand, 24271552 - 24271699
Alignment:
Q  211 gagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatg 310  Q
    |||||||||| ||||| |||||| ||| || ||||||||||||  ||||||| |||||||| |||||||||| |   | |||  |||||| ||||||||     
T  24271552 gagttcttatggaatgggctacccaaaaaatatgcatcttgttcgtataggtagtatcaaataattcttatatgtcttactttaaccatgtagtctcata 24271651  T
Q  311 catg--cacgacctcagaatccctctcattccgatgttgattcggttt 356  Q
    | ||  ||||||||||| | |||||||||||||||||  |||||||||    
T  24271652 cctgcacacgacctcaggaaccctctcattccgatgtgaattcggttt 24271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 17628669 - 17628575
Alignment:
Q  192 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||| |||||| ||||||||| ||||||| |  || |||| ||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  17628669 tcaggcacgctcaactgtggaattcttatgggttgggctatcgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagc 17628575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 52048659 - 52048740
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    ||||||||||||||||||| ||||||  |||  || ||||||||||||||||  |||| || ||||||||||||||||||||    
T  52048659 ttaactgtggagttcttatggaatgacttacaaaatgaagatgcatcttgttagtatacgtagtatcaaacaattcttataa 52048740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 33765013 - 33764929
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 280  Q
    ||||||||| |||| |||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| | | |||||||||||||    
T  33765013 cacgcttaagtgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaattctta 33764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 21067884 - 21067760
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||| ||||||||| |||||  ||||| ||| ||  || ||||||||||||||||| | | |||||||||||||||||   |||||| ||    
T  21067884 cacgcttaactgtgaagttcttatggaatggactaccaaaaaaa--tgtatcttgttgatataggtagcaccaaacaattcttataagtcttccttcaac 21067787  T
Q  297 catggagtctcatgcatgcacgacctc 323  Q
    |||| |||| ||| | |||||| ||||    
T  21067786 catgcagtcccatacctgcacggcctc 21067760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 27578444 - 27578531
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    ||||||||||| |||||||||||| |  || | |||||||| ||||||||||||||||||||||||| | | |||| |||||||||||    
T  27578444 cacgcttaactatggagttcttatggtttgggataccgaaaagaagatgcatcttgttgatataggtagcaccaaataattcttataa 27578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 362
Target Start/End: Original strand, 43928989 - 43929116
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    |||||||||||||||||||| |||| || ||| |||||||||||| |||||  |||||| ||||   |||||||| | |||||| | |||| | ||||||    
T  43928989 aaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagctttccttcgaccaaatagtctcatacctgcacggcttcaggaaccctct 43929088  T
Q  335 cattccgatgttgattcggtttgtctaa 362  Q
    |||| | | || ||||||||||| ||||    
T  43929089 catttcaaagtggattcggtttgcctaa 43929116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 53391990 - 53391927
Alignment:
Q  246 atcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcat 309  Q
    ||||||||||||||| ||||||||||||||| ||||||||| | |||| |||||| ||||||||    
T  53391990 atcttgttgatatagatggtatcaaacaatttttataagcatttcttcaaccatgcagtctcat 53391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 345
Target Start/End: Complemental strand, 41870032 - 41869922
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||   |||||| | |||| |||| |||  ||| ||   ||||| ||||||||    
T  41870032 aaagaagatgcgtcttgttgatataggtagtatcatacaattcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcaggatccctct 41869933  T
Q  335 cattccgatgt 345  Q
    || ||||||||    
T  41869932 cactccgatgt 41869922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 20306151 - 20306237
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| ||| |||||||||  |||| | |||| |||  ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  20306151 cacgcttaaccgtgtagttcttatgaaatgggataccaaaa--agatgcatcttgttgatatagatagtaccaaacaattcttataagc 20306237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 345
Target Start/End: Complemental strand, 17028984 - 17028878
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    |||| ||||||||||||||||||| | | | ||||||||||| ||   ||||||| || ||| |||| ||| |||||| | | |||| ||||||||||||    
T  17028984 aagacgcatcttgttgatataggtagcacctaacaattcttacaaatcctccttcaactatgcagtcccatacatgcaaggcttcaggatccctctcatt 17028885  T
Q  339 ccgatgt 345  Q
    |||||||    
T  17028884 ccgatgt 17028878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 23976245 - 23976293
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||||||||||  ||||||| ||| ||||||||||||||||    
T  23976245 aaagaagatgcatcttgttagtataggtagtaccaaacaattcttataa 23976293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 42838780 - 42838690
Alignment:
Q  196 acacgcttaactgtgga-gttcttatagaatgagctaccgaaaga---agatgcatcttgttgatataggtggtatcaaacaattcttata 282  Q
    ||||||||||||||| | |||||||| |||||| ||| ||||| |   |||||||| |||||||||||||| ||| ||||||||| |||||    
T  42838780 acacgcttaactgtgaaagttcttatggaatgaactatcgaaaaagaaagatgcattttgttgatataggtagtaccaaacaatttttata 42838690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 4186315 - 4186224
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcctt 292  Q
    ||||||||| |||||||||  |||| |||||| ||| ||||||| |||||||| || ||||| ||| ||||  ||||||||||||| |||||    
T  4186315 ttaactgtgtagttcttatgcaatgggctaccaaaaagaagatgaatcttgttcatgtaggtagtaccaaatcattcttataagcattcctt 4186224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 11828472 - 11828509
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg 234  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  11828472 cacgcttaactgtggagttcttatggaaggagctaccg 11828509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 34554577 - 34554492
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagca 286  Q
    |||||| || ||||||||| |||||  ||||| |||  || |||||||||| || ||||||| || ||||||||||||||||||||    
T  34554577 ttaactatgaagttcttatggaatggtctaccaaaaataaaatgcatcttgctggtataggtagtgtcaaacaattcttataagca 34554492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 27578896 - 27578984
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||| ||||||||| ||  | ||||| |||| |||||||  |||  |||||||| || ||| |||||||||||||||||    
T  27578896 cacgcttaactgtgtagttcttatggatagggctactgaaaagaagatgtgtctaattgatatatgtagtaccaaacaattcttataag 27578984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 196 - 345
Target Start/End: Original strand, 3886593 - 3886743
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||    
T  3886593 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagcattccttct 3886692  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||| ||| | || |||||||||| |||||||||||||||||||    
T  3886693 accatgcagtcccatacttgtacgacctcaggatccctctcattccgatgt 3886743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 2474112 - 2473963
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  2474112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataagccttccttcaa 2474013  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||||| || ||||||| || |||||||||||||||||||    
T  2474012 ccatgcagtctcatgcctgtacgaccttaggatccctctcattccgatgt 2473963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 17445448 - 17445606
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccga-aagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17445448 cacgcttaactgtggatttcttatggaatgagctaccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17445547  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||||| | |||| |||||| |||||||||||| ||||| ||||||||||    
T  17445548 ccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatg-tgattcggtt 17445606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 189218 - 189072
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| ||||    
T  189218 gcttaactgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagccttccttcaacca 189119  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    || |||| ||| |||| ||| |||||| |||||||||||||||||||    
T  189118 tgcagtcccatacatgtacggcctcaggatccctctcattccgatgt 189072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 192 - 345
Target Start/End: Complemental strand, 22556694 - 22556540
Alignment:
Q  192 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 290  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||  |||    
T  22556694 tcagccacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagccttcc 22556595  T
Q  291 ttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||| |||||| |||| ||| | |||||| |||||| | |||||||||||||||||    
T  22556594 ttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccgatgt 22556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 8642027 - 8642176
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  8642027 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 8642126  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | |||||| ||| || ||||||||||||| |||||    
T  8642127 ccatgcagtcccatacctgcacggccttaggatccctctcattctgatgt 8642176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 10927396 - 10927554
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10927396 cacgtttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927495  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||||||| | | |||| |||||  |||||||||||||||||| ||||||||||    
T  10927496 ccatgtagtctcatacctacacggcctcaagatccctctcattccgatg-tgattcggtt 10927554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 34867943 - 34867785
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  34867943 cacgcttaactatggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 34867844  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  34867843 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 34867785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 1822059 - 1821910
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  1822059 cacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 1821960  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | |||||||||| |  ||| |||||||||||||||    
T  1821959 ccatgcagtctcatacctgcacgaccttaagatctctctcattccgatgt 1821910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 356
Target Start/End: Original strand, 8391315 - 8391473
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||||   |||||| |    
T  8391315 cacgcttaactatggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatacaggag-taccaaacaattcttataagtcttccttcaa 8391413  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 356  Q
     |||| |||||||||| | |||| ||||||||||||||||||||||||| |||||||||||    
T  8391414 tcatgtagtctcatgcctacacggcctcagaatccctctcattccgatg-tgattcggttt 8391473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 10926939 - 10927097
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| ||||||||||||||||||| |||||  ||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10926939 cacgtttaactgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927038  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | ||||||||||| ||||||||||||| |||| ||||||||||    
T  10927039 ccatgtagtcccatacctacacgacctcaggatccctctcattctgatg-tgattcggtt 10927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 201 - 355
Target Start/End: Original strand, 21886143 - 21886297
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||    
T  21886143 cttaactttggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagccttccttcaaccat 21886242  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    | |||| ||| | ||||| ||||||| | ||||||||||||| || ||||||||||    
T  21886243 gcagtcccatacctgcacaacctcaggaaccctctcattccggtg-tgattcggtt 21886297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 2193969 - 2193824
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2193969 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2193870  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | | || | |||||  |||||||||||||||    
T  2193869 ccatgtagtcccatacctacaaggcctcatgatccctctcattccg 2193824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 2474558 - 2474409
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||   |||||| |    
T  2474558 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagtcttccttcaa 2474459  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| |||   || ||||||| || ||| |||||||||||||||    
T  2474458 ccatgcagtcccatatctgtacgaccttaggatctctctcattccgatgt 2474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 201 - 361
Target Start/End: Original strand, 20039472 - 20039631
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||| || |||    
T  20039472 cttaactgtagagttcttatggaatgggctaccaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaactatg 20039571  T
Q  301 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
     ||||  || | | |||| |||||  |||||||||||||||||| ||||||||||||||||    
T  20039572 tagtcctatacctacacggcctcatgatccctctcattccgatg-tgattcggtttgtcta 20039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 42788639 - 42788797
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   || ||| |    
T  42788639 cacgcttaactgtggagttcttgtggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttctttcaa 42788738  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||  | | |||| |||||| ||||||||||||||| || ||||||||||    
T  42788739 ccatgtagtcccaatcctacacggcctcaggatccctctcattccgttg-tgattcggtt 42788797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 192 - 345
Target Start/End: Complemental strand, 22557127 - 22556973
Alignment:
Q  192 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 290  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||  |||    
T  22557127 tcaggcacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatattggtagtaccaaacaattcatataagccttcc 22557028  T
Q  291 ttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||| |||||| |||| ||| | |||||| |||||  | | |||||||||||||||    
T  22557027 ttcaaccatgcagtcccatacctgcacggcctcatgaactctctcattccgatgt 22556973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 34371765 - 34371656
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34371765 cacgcttaactgtggtgttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34371666  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  34371665 ccatgcagtc 34371656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 34372221 - 34372112
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34372221 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34372122  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  34372121 ccatgtagtc 34372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 3887050 - 3887199
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||||||   |||||| |    
T  3887050 cacgcttaactgtgaagttcttatggaatgagttaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcatataagtcttccttcaa 3887149  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | || ||| |||||| ||| |||||||||||||||    
T  3887150 ccatgcagtcccatacctgtacggcctcaggatcactctcattccgatgt 3887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 27646828 - 27646986
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  |||| |||||| ||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||  |||||| |    
T  27646828 cacgcttaactgtggagttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagccttccttcaa 27646927  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| || | ||| | | |||| ||  || |||||||||||||||||| ||||||||||    
T  27646928 ccatgtagccccatacctacacggccctaggatccctctcattccgatg-tgattcggtt 27646986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 39147092 - 39146943
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| ||||| || |||||||||||||||||||||    ||||| |    
T  39147092 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataagtctaccttcaa 39146993  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | |||| |||||  |||||||||||| ||||||    
T  39146992 ccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgt 39146943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 356
Target Start/End: Original strand, 30719798 - 30719957
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||||| ||| |||||||||| |||||||  |||||| |    
T  30719798 cacgcttaattgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataagccttccttcaa 30719897  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 356  Q
    | |||  ||| ||| | ||||| ||||||| ||||||||||||| |||| |||||||||||    
T  30719898 caatgatgtcccatacttgcacaacctcaggatccctctcattctgatg-tgattcggttt 30719957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 341
Target Start/End: Complemental strand, 18304581 - 18304439
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    ||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||  |||||||  | | ||  |||    
T  18304581 gcttaactgtggaattcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataagcttttcatcatcca 18304482  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    || |||| ||| | | ||||||||||| |||| ||||||||||    
T  18304481 tgtagtcccatacctacacgacctcaggatccttctcattccg 18304439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 15513005 - 15513164
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc--actccttc 293  Q
    |||| |||| |||||||||||||| ||||||| |||| ||| ||||||||||||||||||||| ||| ||| | ||||||||||||||||  | ||||||    
T  15513005 cacgtttaattgtggagttcttatggaatgagataccaaaaagaagatgcatcttgttgatattggtagta-ccaacaattcttataagcatattccttc 15513103  T
Q  294 taccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
     |||||| |||| ||| | | |||  ||| |  |||||||||||||||||| ||||||||||    
T  15513104 aaccatgtagtcccatacctacacagcctaatgatccctctcattccgatg-tgattcggtt 15513164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 30684549 - 30684698
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||| | ||| |||||||||| |||||||   ||||| |    
T  30684549 cacgcttaactgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaattcatataagcctcccttcaa 30684648  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    | |||  ||  ||| | ||||| ||||||| ||||| |||||||||||||    
T  30684649 caatgatgttccatacttgcacaacctcaggatccccctcattccgatgt 30684698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 29680099 - 29680166
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggt 262  Q
    |||||||||||||||||||||||||  |||| |||||| ||| |||||||||||||||||||||||||    
T  29680099 acacgcttaactgtggagttcttatgtaatgggctaccaaaaagaagatgcatcttgttgatataggt 29680166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 4673466 - 4673552
Alignment:
Q  199 cgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||||||||| ||||||  |||| ||| ||| |||||||||||||||| ||||| || |||| ||||||||||||    
T  4673466 cgcttaactgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataattcttataag 4673552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 24182239 - 24182381
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||  |||| |||| |  || | ||||||||||||||||||||||||| ||||| | ||| |||| |||||||||||||  |||||| ||    
T  24182239 cacgcttaactgttaagttattatggtttggggtaccgaaagaagatgcatcttgttggtatagatagtaccaaataattcttataagccttccttcaac 24182338  T
Q  297 catggagtctcatgcatgcacgacctcagaatccctctcattc 339  Q
    |||   ||||||| | ||||||  ||||  |||||||||||||    
T  24182339 catttcgtctcatacttgcacgttctcaagatccctctcattc 24182381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 20858538 - 20858623
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||| |||||||||||| ||||||||||| | |||||||| |||||||||||||||||    || ||||||||||||||||||    
T  20858538 cttaactatggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatatagaaaataccaaacaattcttataagc 20858623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 18750201 - 18750293
Alignment:
Q  209 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||||| |  |||||| ||||||    
T  18750201 tggagttcttatggaataagctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataatccttccttcaaccatg 18750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 11757274 - 11757337
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 259  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||||||||| |||||||||||    
T  11757274 cacgcttaactgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatata 11757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 344
Target Start/End: Original strand, 11160712 - 11160822
Alignment:
Q  234 gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctc 333  Q
    ||||||| |||||||||||||| |||| | ||| ||||||||| ||||||||  |||||| || ||| ||| |||| | | |||||| |||  |||||||    
T  11160712 gaaagaatatgcatcttgttgacatagatagtaccaaacaattattataagccttccttcaactatgtagtgtcatacctacacgacttcatgatccctc 11160811  T
Q  334 tcattccgatg 344  Q
    |||||||||||    
T  11160812 tcattccgatg 11160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 4657992 - 4658073
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||| ||||||||| |||||  ||||| ||| |||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  4657992 taactgtgaagttcttatggaatggactaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa 4658073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 22975076 - 22975152
Alignment:
Q  269 aaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||||||||||||||  | |||| |||||| |||| ||| | |||||| |||||| |||||||||||||||||||    
T  22975076 aaacaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccgatgt 22975152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 361
Target Start/End: Original strand, 5066923 - 5067048
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||   |||||  | |||  |||||||| |||||||| |||| | ||| ||||    
T  5066923 aaagaaaatgcatcttgttgatatagataataccaaacaattcttataagttttcctttaatcatacagtctcatacatgcacggcctcgggatctctct 5067022  T
Q  335 cattccgatgttgattcggtttgtcta 361  Q
    ||||| | || ||||||| ||||||||    
T  5067023 cattctggtg-tgattcgatttgtcta 5067048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 2058696 - 2058808
Alignment:
Q  243 tgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccga 342  Q
    |||||||||||||||||||| ||| |||||||||| ||||||   |||||| | |||  ||||||||   |||| ||| |||| ||| |||||| |||||    
T  2058696 tgcatcttgttgatataggtagtaccaaacaattcatataagtcttccttcaatcatccagtctcatagctgcatgacttcaggatctctctcaatccga 2058795  T
Q  343 tgttgattcggttt 356  Q
    || |||||||||||    
T  2058796 tg-tgattcggttt 2058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 42429259 - 42429194
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    |||||| |||||| ||||||||| |||| ||| |||||||||||||||||  ||||||| ||||||    
T  42429259 aaagaatatgcatattgttgataaaggtagtaccaaacaattcttataagtcctccttcaaccatg 42429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 16370740 - 16370811
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 306  Q
    ||||||||| | ||||||||||||| || ||| |||||||||||||||||   |||||| |||||| |||||    
T  16370740 aaagaagatacgtcttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatgcagtct 16370811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 345
Target Start/End: Original strand, 43356652 - 43356760
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    ||||||||||||| |||||| | ||||| ||| |||||||||||||||||   ||| || | |||| |||||||| | |||| || ||||| | ||||||    
T  43356652 aaagaagatgcatattgttggtttaggttgtaccaaacaattcttataagtcatcc-tcaatcatgcagtctcatacctgcatgatctcagga-ccctct 43356749  T
Q  335 cattccgatgt 345  Q
    |||||||||||    
T  43356750 cattccgatgt 43356760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 32574651 - 32574740
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||| || |||| ||||||  || |||||| |||| ||||||||| |||||  ||||||| ||| |||||||||| |||||||    
T  32574651 cacgcttaactatgaagttattatagtttgggctaccaaaagaaagatgcattttgtttgtataggtagtaccaaacaattcctataagc 32574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 107456 - 107605
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||| |    
T  107456 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagccttccttcaa 107555  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | || ||| ||||||||||||||||||||||||||    
T  107556 ccatgcagtcccatacctgtacggcctcagaatccctctcattccgatgt 107605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 9e-46; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 31284269 - 31284418
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  31284269 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 31284368  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | ||||||||||||  |||||||||||||||||||    
T  31284369 ccatgcagtcccatacctgcacgacctcaagatccctctcattccgatgt 31284418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 28561899 - 28561754
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  28561899 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 28561800  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | |||||| |||||| | |||||||||||||    
T  28561799 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccg 28561754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 16811534 - 16811385
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||||||||  |||||| |    
T  16811534 cacgcttaactgtggaattcttatggaatgagctaccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataagccttccttcaa 16811435  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||||||| ||  | | |||| |||||| |||||||||||||||||||    
T  16811434 ccatggagtcccaaacctacacggcctcaggatccctctcattccgatgt 16811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 201 - 341
Target Start/End: Complemental strand, 39653313 - 39653172
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||| |||||    
T  39653313 cttaactgtggagttctcatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataagctttccttcaaccat 39653214  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    | |||| ||| | |||||| |||||| | |||||||||||||    
T  39653213 gcagtcccatacctgcacggcctcaggaaccctctcattccg 39653172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 41472453 - 41472305
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| ||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |    
T  41472453 cacgtttaaccgtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagc-ttccttcaa 41472355  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | || |||||||||| |||||||||||||||||||    
T  41472354 ccatgcagtctcatacctgtacgacctcaggatccctctcattccgatgt 41472305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 50347899 - 50347754
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  50347899 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 50347800  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||| | |||||||| ||| || | |||||| |||||||||||||||    
T  50347799 ccaagtagtctcatacatacaaggcctcaggatccctctcattccg 50347754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 337
Target Start/End: Original strand, 25239069 - 25239211
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  ||||||     
T  25239069 acacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttca 25239168  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcat 337  Q
    |||||  |||| ||| | | |||||||||||||||||||||||    
T  25239169 accatatagtcccatacctacacgacctcagaatccctctcat 25239211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 11180027 - 11180172
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  11180027 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 11180126  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||    
T  11180127 ccatgtagtcccatacctacaaggcctcaggatccctctcattccg 11180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 14814102 - 14813944
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||  |||||  |    
T  14814102 cacgcttaactgtggagttcttatggaacgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataagccttcctttaa 14814003  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||||||| | | |||| |||||| | ||||||||||||| || ||||||||||    
T  14814002 ccatgcagtctcatacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 14813944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 13150547 - 13150657
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  13150547 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 13150646  T
Q  296 ccatggagtct 306  Q
    ||||| |||||    
T  13150647 ccatgtagtct 13150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 39641091 - 39640941
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||   ||||||     
T  39641091 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataagtcttccttca 39640992  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||||||| | | |||| |||||| ||| ||||||||| |||||    
T  39640991 accatgtagtctcatacctacacggcctcaggatctctctcattctgatgt 39640941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 8067433 - 8067284
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||   ||||| |    
T  8067433 cacgcttaactatggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccggccttcaa 8067334  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| | || ||| | |||||| ||||||  ||||||||||||||||||    
T  8067333 ccatgcaatcccatacctgcacggcctcagggtccctctcattccgatgt 8067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 20885110 - 20885259
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||   |||||| |    
T  20885110 cacgcttaattgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaa 20885209  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | ||||||||||  |||||||||||| ||||||    
T  20885210 ccatgtagtcacatacctacacgacctcaagatccctctcattgcgatgt 20885259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 25230241 - 25230390
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25230241 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25230340  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | ||||||||||| ||||||||| |||||||||    
T  25230341 ccatgtagtcccatacctacacgacctcaggatccctctccttccgatgt 25230390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 25237828 - 25237977
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25237828 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25237927  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | ||||||||||| ||||||||| |||||||||    
T  25237928 ccatgtagtcccatacctacacgacctcaggatccctctccttccgatgt 25237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 25248264 - 25248115
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||| ||| |||||||| |||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| || |||||  |    
T  25248264 cacgctgaaccgtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattcctttaa 25248165  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | |||||| ||| ||||||||||||||||||||||    
T  25248164 ccatgcagtcccatacctgcacggccttagaatccctctcattccgatgt 25248115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 27187323 - 27187472
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||||||  || ||  |    
T  27187323 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagccttcatttaa 27187422  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| |||||||  |||||| |||||||||||||| ||||    
T  27187423 ccatgcagtcccatacatgcacagcctcaggatccctctcattccaatgt 27187472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 2911248 - 2911084
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||  |||||||||||| |||||| || || ||| |    
T  2911248 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataaccattctttcaa 2911149  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    |||||  ||| ||| | |||||| |||| | ||||||||||||| | || |||||||||| |||||    
T  2911148 ccatgtggtcccatacctgcacggcctcgggatccctctcattcaggtg-tgattcggttcgtcta 2911084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 13150092 - 13150237
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  13150092 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 13150191  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | | || | |||||| | |||||||||||||    
T  13150192 ccatgtagtcccatacctacaaggcctcaggagccctctcattccg 13150237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 30529840 - 30529691
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || ||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  | |||| |    
T  30529840 cacgcttaactatgaagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagccttacttcaa 30529741  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  30529740 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 30529691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 32227653 - 32227509
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227653 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227554  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||    
T  32227553 ccatgtagtcccatacctacaaggcctcag-atccctctcattccg 32227509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 7477341 - 7477195
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| |||||||||||||| |  || |||||||||| ||||||| |||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7477341 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgtatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7477242  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    || |||||||| | |||||||| | || |||||||||||||||||||    
T  7477241 tgcagtctcatacctgcacgactttaggatccctctcattccgatgt 7477195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 7494031 - 7493885
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| |||||||||||||| |  || |||||||||| |||||||||||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7494031 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7493932  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    || |||||||| | |||||||| | || ||| |||||||||||||||    
T  7493931 tgcagtctcatacctgcacgactttaggatctctctcattccgatgt 7493885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 25230698 - 25230847
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25230698 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25230797  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | | || | |||||| |||||||||||||| ||||    
T  25230798 ccatgtagtctcatacctacatggcctcaggatccctctcattccaatgt 25230847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 25238285 - 25238434
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25238285 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25238384  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | | || | |||||| |||||||||||||| ||||    
T  25238385 ccatgtagtctcatacctacatggcctcaggatccctctcattccaatgt 25238434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 32227214 - 32227359
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227214 cacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227313  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | | || | ||| || |||||||||||||||    
T  32227314 ccatgtagtcccatacctacaaggccttaggatccctctcattccg 32227359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 32386727 - 32386830
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  32386727 cacgcttaactgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 32386826  T
Q  296 ccat 299  Q
    ||||    
T  32386827 ccat 32386830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 14820307 - 14820218
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  14820307 cacgcttaactgtggagttcttatggaacgagctaccgaaaataagatgcatcttgttgatataagtagtaccaaacaattcttataagc 14820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 25238677 - 25238790
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||| || | ||| |||||||||||||||||   |||||| |    
T  25238677 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataagtcttccttcaa 25238776  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  25238777 ccatgtagtctcat 25238790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 4067353 - 4067441
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  4067353 cacgcttaactgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag 4067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 37045188 - 37045030
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||  | |||| ||| ||||||||| |||||||||||||||  || ||||||||||||||||||| ||||||      
T  37045188 cacgcttaactgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatataggtattaccaaacaattcttataagcattccttcat 37045089  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
     |||| |||| ||  | | |||| |||||| ||||||||||||| |||| ||||||||||    
T  37045088 tcatgtagtcccacacctacacggcctcaggatccctctcattcagatg-tgattcggtt 37045030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 281
Target Start/End: Original strand, 25802540 - 25802626
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttat 281  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  25802540 acacgcttaactgtggatttcttatggaatgggctatcgaaaagaagatgcatcttgttgatataggtagtaccaaaccattcttat 25802626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 345
Target Start/End: Complemental strand, 16811074 - 16810929
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||| | |||   ||||||||||||||||  ||| || |||||    
T  16811074 cttaaatgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagccttccatcaaccat 16810975  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    | |||| |||   | |||| |||||  |||||||||||||||||||    
T  16810974 gcagtcccatatctacacggcctcaagatccctctcattccgatgt 16810929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 361
Target Start/End: Original strand, 32796936 - 32797092
Alignment:
Q  205 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggag 303  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| |||||||||||||||||   | |||| |||||| ||    
T  32796936 actgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttgcttcaaccatgtag 32797035  T
Q  304 tctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    | |||| | | || |  ||||| |||||||| ||| ||||| |||||||| |||||||    
T  32797036 tttcatacctacatggtctcaggatccctcttatttcgatg-tgattcggcttgtcta 32797092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 29224477 - 29224364
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||| ||||||||| |  || |||||||||| ||||||||||||||||  ||||||| ||| |||||||||||||||||   |||||| |    
T  29224477 cacgcttaattgtgaagttcttatggtttgggctaccgaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataagtcttccttcaa 29224378  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  29224377 ccatgcagtctcat 29224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 41474150 - 41474001
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||| ||||||||||| ||||||||||| | ||| ||| ||| ||  ||||||||||||||||  |||||||||||||||||||||   |||||  |    
T  41474150 cacgcttgactgtggagtttttatagaatgatccaccaaaaagaatatcaatcttgttgatataggaagtatcaaacaattcttataagtcttcctttaa 41474051  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||  |||| ||| | || |||||||||  |||||||||||| ||||||    
T  41474050 ccatccagtcacatacctgaacgacctcaagatccctctcatttcgatgt 41474001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 26309987 - 26310069
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||| ||||||| || ||||||||||||  |||||||||||||||| ||| |||| || ||| |||| |||||||||||    
T  26309987 ttaactgtcgagttctaatggaatgagctaccataaagaagatgcatctttttggtatatgtagtaacaaaaaattcttataa 26310069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 280
Target Start/End: Original strand, 25802997 - 25803081
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 280  Q
    |||||||||||  |||||||||||  |||| | |||||||| |||||| |||||||||  ||||||| ||| |||||||||||||    
T  25802997 cacgcttaactacggagttcttatgaaatgggataccgaaaagaagatacatcttgtttttataggtagtaccaaacaattctta 25803081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 31103955 - 31104041
Alignment:
Q  201 cttaactgtggagttcttatagaatgag--ctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||| |||| ||||||||| |||||||  ||||| ||| ||| |||||||| |||| ||||| | |||||||||||||||||||||    
T  31103955 cttaaatgtgaagttcttatggaatgagagctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataag 31104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 3890088 - 3890046
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttat 281  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  3890088 aagatgcatcttgttgatatatgtagtagcaaacaattcttat 3890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 345
Target Start/End: Original strand, 20061188 - 20061333
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||    
T  20061188 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 20061287  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    | |||| ||| | ||||||||||||| ||||||||||||| |||||    
T  20061288 gcagtcccatacctgcacgacctcaggatccctctcattctgatgt 20061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20054073 - 20054231
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054073 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054172  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20054173 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20054529 - 20054687
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054529 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054628  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20054629 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20054687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20054985 - 20055143
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054985 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055084  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055085 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20055143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20055441 - 20055599
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055441 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055540  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055541 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20055599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20055897 - 20056055
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055897 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055996  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055997 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20056055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20056353 - 20056511
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20056353 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20056452  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20056453 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20056511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20057256 - 20057414
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20057256 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20057355  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20057356 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20057414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 20845654 - 20845812
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20845654 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagccttccttcaa 20845753  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||||||| | |||||| |||||| | || |||||||||| || ||||||||||    
T  20845754 ccatgcagtctcatacctgcacggcctcaggaaccgtctcattccggtg-tgattcggtt 20845812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 43057516 - 43057674
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  43057516 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 43057615  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||||||| | | |||| |||||| |||||||||||||||||| ||||||||||    
T  43057616 ccatgtagtctcatacctacacggcctcaggatccctctcattccgatg-tgattcggtt 43057674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 345
Target Start/End: Original strand, 50002699 - 50002849
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50002699 acacgcttaactatggagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 50002798  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||| ||||| | |||| |||||| ||| |||||||||||||||    
T  50002799 accatgcagtcccatgcctacacggcctcaggatctctctcattccgatgt 50002849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 35759601 - 35759750
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35759601 cacgtttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35759700  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | |||||| |||||| |||||||||||||||||||    
T  35759701 ccatgcagtcccatacctgcacggcctcaggatccctctcattccgatgt 35759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 35760907 - 35761056
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||  |||||||| || |||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35760907 cacgcttaactacggagttctcatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35761006  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | |||||| |||||| |||||||||||||||||||    
T  35761007 ccatgcagtctcatacctgcacggcctcaggatccctctcattccgatgt 35761056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 204 - 355
Target Start/End: Original strand, 50002285 - 50002436
Alignment:
Q  204 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgga 302  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||  |||||| |||||| |    
T  50002285 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataagccttccttcaaccatgta 50002384  T
Q  303 gtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||| ||||| | |||| |||||  |||||||||||||||||| ||||||||||    
T  50002385 gtcccatgcctacacggcctcatgatccctctcattccgatg-tgattcggtt 50002436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 38341059 - 38340901
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  38341059 cacgcttaactgtgaagttcttatggaatgagctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 38340960  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | || |||||||||| || ||||||||||    
T  38340959 ccatgcagtcccatacctgcacggcctcaggaaccatctcattccggtg-tgattcggtt 38340901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 2635078 - 2634928
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| ||   ||||||     
T  2635078 acacgcttaactgtggagttcttattgaatgagctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttatgagttatccttca 2634979  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| |||| ||| | ||||| ||||||  |||||||||||||||||||    
T  2634978 accatgcagtcccatacctgcacaacctcatgatccctctcattccgatgt 2634928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 197 - 338
Target Start/End: Original strand, 20057712 - 20057854
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  20057712 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttctttcaa 20057811  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||    
T  20057812 ccatgcagtcccatacctgcacggcctcaggaaccctctcatt 20057854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 200 - 361
Target Start/End: Original strand, 30872946 - 30873107
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| ||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||   |||||| ||||    
T  30872946 gcttaattgtggagttcttatagaatggactaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttaaaagtcttccttcaacca 30873045  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    |  |||||||| | |||||| |||||||||||||||||||||| || |||||||||| |||||    
T  30873046 tacagtctcatacctgcacggcctcagaatccctctcattccggtg-tgattcggttcgtcta 30873107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 52250359 - 52250201
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  52250359 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcga 52250260  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | || | |||||  ||||||||||||||| || ||||||||||    
T  52250259 ccatgtagtcccatacctacaaggcctcatgatccctctcattccggtg-tgattcggtt 52250201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 16451926 - 16452075
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16451926 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16452025  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| | | | | || | |||||| |||||||||||||||||||    
T  16452026 ccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgt 16452075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 16461079 - 16461228
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16461079 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16461178  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| | | | | || | |||||| |||||||||||||||||||    
T  16461179 ccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgt 16461228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 43057058 - 43057215
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||  |||||| |    
T  43057058 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttctaagccttccttcaa 43057157  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | | |||| ||| || ||||| ||||||| |||| ||||||||||    
T  43057158 ccatgtagtcacatacctacacggccttaggatccc-ctcattctgatg-tgattcggtt 43057215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 46693728 - 46693878
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| ||||  |||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  46693728 cacgcttaactgtggagttattatgaaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagccttccttcaa 46693827  T
Q  296 ccat-ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||   |||| ||| |||||||||||| || |||||||||||||||||||    
T  46693828 ccatcacagtcccatacatgcacgaccttaggatccctctcattccgatgt 46693878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 20056808 - 20056898
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  20056808 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataagc 20056898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 20060337 - 20060422
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  20060337 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20060422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 361
Target Start/End: Complemental strand, 12883678 - 12883513
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| ||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||| | ||||||     
T  12883678 acacacttaactgtggagtttttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtattccttca 12883579  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    | |||| |||| ||| | |||||  |||| | |||| |||||||||| || |||||||||| |||||    
T  12883578 atcatgcagtcccatacctgcacagcctcgggatccatctcattccggtg-tgattcggttcgtcta 12883513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 345
Target Start/End: Complemental strand, 2328463 - 2328319
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| ||||||    
T  2328463 ttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatg 2328364  T
Q  301 gagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
     |||| ||| | || ||| ||||| |||  |||||||||| ||||    
T  2328363 cagtcccatacctgtacggcctcataatttctctcattccaatgt 2328319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 51372867 - 51372970
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||| |||  |||||||||||||||||  |||||| |    
T  51372867 cacgcttaactgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagccttccttcaa 51372966  T
Q  296 ccat 299  Q
    ||||    
T  51372967 ccat 51372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 345
Target Start/End: Original strand, 31822657 - 31822805
Alignment:
Q  198 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||||||| ||||||||||| || ||| |||| |||||||||||    |||||| ||    
T  31822657 acgcttaactgtggagttcttttggattgagctaccgaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataaatcttccttcaac 31822756  T
Q  297 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||| |||||||| | | |||| |||||  ||||||||||||| |||||    
T  31822757 catgtagtctcatacctacacggcctcatgatccctctcattctgatgt 31822805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 50003068 - 50003226
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||| | ||||||||||| |||| ||||||||||||||||||||||||| ||| | ||||||| |||||||    ||||  |    
T  50003068 cacgcttaactgtgaagttcttttggaatgagctactgaaaagaagatgcatcttgttgatataggtagtacccaacaattattataagtctccctttaa 50003167  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| ||||  || | |||| | |||||| |||||||||||||||||| ||||||||||    
T  50003168 ccatgcagtcctatacctgcatggcctcaggatccctctcattccgatg-tgattcggtt 50003226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 16907388 - 16907245
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||| |||||||||| |||||||  | || |||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  || |||     
T  16907388 acacgcttaactatggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagccttctttca 16907289  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    |||||| ||| |||| | |||||   |||| |||||||||||||    
T  16907288 accatgcagtttcatacctgcacagtctcaaaatccctctcatt 16907245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 12728142 - 12728056
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggt-atcaaacaattcttataag 284  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||  || | |||||||||||||||||    
T  12728142 gcttaactgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataag 12728056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 23180883 - 23180734
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||| ||||||| ||||| |||| |||| ||||||| |||||||||||||||||| ||| ||| |||||||||||| || |||||| |    
T  23180883 cacgcttaattgtggaattcttatggaatgggctagcgaatagaagatacatcttgttgatataggtagtaccaagcaattcttataatcattccttcaa 23180784  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||| | |||| ||| | | |||| | |||  |||||||||||||| ||||    
T  23180783 ccacgtagtcccattcctacacggcttcaagatccctctcattccaatgt 23180734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 371
Target Start/End: Complemental strand, 7548243 - 7548070
Alignment:
Q  198 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||| ||||||||||||||  |||| |||||| ||| ||| ||||||||||||||||||| |  || ||||||||| |||||||   |||||  |     
T  7548243 acgcttaattgtggagttcttatcaaatgggctaccaaaaagaatatgcatcttgttgatatagttaataccaaacaatttttataagtcttcctttaat 7548144  T
Q  297 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtctaagttgtcagg 371  Q
    |||| |||||||| | | |||| |||||  |||||||||||| | ||| |||||| ||||||| |||||||||||    
T  7548143 catgtagtctcatacctacacggcctcatgatccctctcattgcaatg-tgattcagtttgtcgaagttgtcagg 7548070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 52250696 - 52250641
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 251  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52250696 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 52251033 - 52250978
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 251  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52251033 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 355
Target Start/End: Complemental strand, 10820702 - 10820587
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    |||||| ||||| ||||||||||| ||| ||||||||||||||||    |||||| |||||| ||||  || ||| |||  ||||| ||||||||||| |    
T  10820702 aagatgtatcttattgatataggtagtaccaaacaattcttataaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcact 10820603  T
Q  339 ccgatgttgattcggtt 355  Q
    |||||| ||||||||||    
T  10820602 ccgatg-tgattcggtt 10820587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 16440576 - 16440660
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||| || |||| ||||||||||||||||| ||| ||| ||||||||||||| ||| ||| ||| |||||| ||||||||||    
T  16440576 cttaactttgaagttattatagaatgagctaccaaaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataag 16440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 357
Target Start/End: Original strand, 16410721 - 16410877
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    |||||| || ||||||| ||||||  |||||| |||  |||||||||||||||| ||| ||| |||  ||| |||||||||||||  |||||| || |||    
T  16410721 ttaactttgaagttcttctagaataggctaccaaaaacaagatgcatcttgttggtattggtagtagtaaataattcttataagctttccttcaacaatg 16410820  T
Q  301 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttg 357  Q
     | || ||| |   ||||| ||||||||||||||||||| || ||| ||| ||||||    
T  16410821 cattcccatactcacacgatctcagaatccctctcattctgaagttaatttggtttg 16410877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 356
Target Start/End: Complemental strand, 2634580 - 2634459
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaat-ccctc 333  Q
    |||||||||||||||||||  ||||| | ||| ||||||||||||  ||||  |||||  | |||| | |||||| ||| ||| ||||||| || |||||    
T  2634580 aaagaagatgcatcttgtttgtatagctagtaccaaacaattcttgcaagccttcctttaatcatgcaatctcatacatacacaacctcaggatcccctc 2634481  T
Q  334 tcattccgatgttgattcggttt 356  Q
    ||||| ||||| |||||||||||    
T  2634480 tcatttcgatg-tgattcggttt 2634459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 31823097 - 31823161
Alignment:
Q  217 ttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 280  Q
    |||| |||||||||||| ||| |||||||||| || ||||||||||| ||| |||| ||||||||    
T  31823097 ttatggaatgagctaccaaaaagaagatgcattttattgatataggtagtaccaaataattctta 31823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 9e-43; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 197 - 344
Target Start/End: Complemental strand, 30966843 - 30966695
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  30966843 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 30966744  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 344  Q
    ||||| |||| ||| |||| ||| |||||| ||||||||||||||||||    
T  30966743 ccatgcagtcccatacatgtacggcctcaggatccctctcattccgatg 30966695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 361
Target Start/End: Complemental strand, 33175112 - 33174947
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  33175112 acacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 33175013  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    |||||| |||| ||| | | |||| |||||| |||||||||||||||||| |||||||| |||||||    
T  33175012 accatgtagtcccatacctacacggcctcaggatccctctcattccgatg-tgattcggcttgtcta 33174947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 24818479 - 24818330
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  24818479 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 24818380  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| |||||||| |||||| |||||||||||||||||||    
T  24818379 ccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgt 24818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 16379090 - 16378945
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||   |||||| |    
T  16379090 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgtataagacttccttcaa 16378991  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||||||| | |||||| |||| |||||||||||||||||    
T  16378990 ccatgcagtctcatacttgcacggcctcggaatccctctcattccg 16378945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 41754442 - 41754297
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  41754442 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 41754343  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||||||| | |||||| |||||  | |||||||||||||    
T  41754342 ccatgcagtctcatacctgcacggcctcaagaaccctctcattccg 41754297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 200 - 355
Target Start/End: Original strand, 18098874 - 18099029
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| ||||    
T  18098874 gcttaactatggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaacca 18098973  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    || |||||||| | | |||| |||||| || ||||||||||||||| ||||||||||    
T  18098974 tgtagtctcatacctacacggcctcaggattcctctcattccgatg-tgattcggtt 18099029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 197 - 344
Target Start/End: Complemental strand, 30966387 - 30966239
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  30966387 cacgcttaactatggagttcttatggaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 30966288  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 344  Q
    ||||| |||| ||| | || ||| |||||| ||||||||||||||||||    
T  30966287 ccatgcagtcccatacctgtacggcctcaggatccctctcattccgatg 30966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 25434049 - 25434207
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||  |||||| |    
T  25434049 cacgcttaactgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttataagccttccttcaa 25434148  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| |  ||||| |||||| ||||||||||||||| || ||||||||||    
T  25434149 ccatgaagtcccataccagcacggcctcaggatccctctcattccggtg-tgattcggtt 25434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 25337990 - 25338135
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  25337990 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 25338089  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | ||||||||||||| | |||||||||||||    
T  25338090 ccatgcagtcccatacctgcacgacctcaggaaccctctcattccg 25338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 29804835 - 29804686
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||   ||||| |    
T  29804835 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctgccttcaa 29804736  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||||||    
T  29804735 ccatgtagtcccatacctacaaggcctcaggatccctctcattccgatgt 29804686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 11388340 - 11388184
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11388340 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11388242  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||||||| | | |||| | |||| || ||||||||||||||| ||||||||||    
T  11388241 ccatgtagtctcatacctacacggcatcaggat-cctctcattccgatg-tgattcggtt 11388184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 1912677 - 1912529
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||     | ||| ||    
T  1912677 cacgcttaactgtggagttcttatggaatgggctaccaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaatctactttcaac 1912578  T
Q  297 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||| |||||||| | | ||  ||||||| |||||||||||||||||||    
T  1912577 catgtagtctcatacctacataacctcaggatccctctcattccgatgt 1912529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 196 - 355
Target Start/End: Complemental strand, 16379547 - 16379388
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||| ||||||   ||||||     
T  16379547 acacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataagtcttccttca 16379448  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    |||||| |||| ||| | |||||| |||| | |||||||||||||| || |||||||||||    
T  16379447 accatgcagtcccatacctgcacggcctcgggatccctctcattccaat-ttgattcggtt 16379388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 33174656 - 33174494
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  33174656 cacgcttaactgcggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 33174557  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    |  || |||| ||| | | |||| | |||| |||||||||||||||||| |||||||||| |||||    
T  33174556 c--tgtagtcccatacctacacggcatcaggatccctctcattccgatg-tgattcggttcgtcta 33174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 5399810 - 5399959
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||  |    
T  5399810 cacgcttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttaaa 5399909  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||  | || ||| | ||||||||||||  |||||||||||||||||||    
T  5399910 ccatacactcccatacttgcacgacctcaagatccctctcattccgatgt 5399959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 8256679 - 8256570
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  8256679 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 8256580  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  8256579 ccatgtagtc 8256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 83171 - 83028
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||||| |||||||||| |||||||||||| ||| || ||| |||||||||| ||||||| ||| ||||| |||||||||||||  |||||     
T  83171 acacgcttaactgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtataggtagtaccaaacgattcttataagcataccttca 83072  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    |||||| |||||||| | ||||| | ||||| ||||||||||||    
T  83071 accatgtagtctcatacctgcacaatctcaggatccctctcatt 83028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 33771151 - 33771065
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33771151 gcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 33771065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 356
Target Start/End: Complemental strand, 1953269 - 1953149
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||| |   |||||| |||||| |||||||| | |||||||| |||| ||||||||    
T  1953269 aaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcaggatccctct 1953170  T
Q  335 cattccgatgttgattcggttt 356  Q
    |||||||||| |||||||||||    
T  1953169 cattccgatg-tgattcggttt 1953149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 29259613 - 29259762
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| || |||||||||  ||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| | ||||||  |||||| |    
T  29259613 cacgcttaactatgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagccttccttcaa 29259712  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | || |||  ||||| |||||||||||||||||||    
T  29259713 ccatgcagtcccatacttgtacggtctcaggatccctctcattccgatgt 29259762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 38898905 - 38899054
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  |||| | |||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| |    
T  38898905 cacgcttaactgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagctctccttcaa 38899004  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| ||||| || | | |||| |||||  ||| ||||| |||||||||    
T  38899005 ccatgtagtctgatacctacacggcctcaagatcactctccttccgatgt 38899054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 27882918 - 27883061
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctac-cgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||| |||||||||||||| ||| |  ||||   |||||||||||||||| ||||||||| |  || ||||||||||||||||||| ||||||     
T  27882918 acacgcttaattgtggagttcttatggaacggcctacaaaaaagaagatgcatcttattgatatagataataccaaacaattcttataagcattccttca 27883017  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    || ||| |||||||| |||||||| |||||| ||||||||||||    
T  27883018 acaatgcagtctcatacatgcacggcctcaggatccctctcatt 27883061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 11394686 - 11394575
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11394686 cacgcttaactgtgaagttcttatggaat-agctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11394589  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  11394588 ccatgtagtctcat 11394575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 355
Target Start/End: Complemental strand, 1707195 - 1707037
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| ||||||||||||||||||||   ||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  1707195 acactcttaactgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 1707096  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    | |||| |||||||| | | |||   ||||| || ||||||||||||||| ||||||||||    
T  1707095 atcatgtagtctcatacctacacagtctcaggat-cctctcattccgatg-tgattcggtt 1707037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 15620051 - 15619902
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| || || | | ||  |||||||||| ||||||||||||||||| ||| ||||||||||||||||||   ||||| |    
T  15620051 cacgcttaattgtggagttcttatggattgggtttccaaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagcttgccttcaa 15619952  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    | ||| |||||||| | |||||| | || | ||||||||||||| |||||    
T  15619951 ctatgcagtctcatacttgcacggcatcgggatccctctcattctgatgt 15619902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 340
Target Start/End: Original strand, 30963713 - 30963857
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| |  || |||||| ||||||||||||||||||||||||||||| | | || ||||||||||||||   |||||| |    
T  30963713 cacgcttaactgtggagttattatggtttgggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaattcttataagttttccttcaa 30963812  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattcc 340  Q
    ||||| | |||| | | |||||| | |||  ||||||||||||||    
T  30963813 ccatgcattctcttacctgcacggcttcatgatccctctcattcc 30963857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 20502175 - 20502050
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||| |||| |||| |||||||||  |||| |||||| ||| |||| |||||||||||||||||   ||| ||||||||||||||||||  |||||| ||    
T  20502175 cacgtttaattgtgaagttcttatgaaatgggctaccaaaaaaagaagcatcttgttgatatagaaagtaccaaacaattcttataagccttccttcaac 20502076  T
Q  297 catggagtctcatgcatgcacgacct 322  Q
    |||| |||| ||| | ||||||||||    
T  20502075 catgcagtcccatacttgcacgacct 20502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 8074042 - 8073957
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||| || ||||||||||||  |||| |||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  8074042 gcttatctatggagttcttatgaaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 355
Target Start/End: Original strand, 18447954 - 18448069
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    ||||||||||||||||||| | || ||| |||||||||||||||||   | |||| |||||| |||| ||| | | |||| |||||| |||||| |||||    
T  18447954 aagatgcatcttgttgatacaagtagtaccaaacaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcatt 18448053  T
Q  339 ccgatgttgattcggtt 355  Q
    |||||| ||||||||||    
T  18448054 ccgatg-tgattcggtt 18448069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 13191121 - 13191039
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||| ||||||||||||| ||||  ||||| ||| ||||||||||||||||| |||| || ||| |||||||||||||||||    
T  13191121 taactatggagttcttataaaatggactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataag 13191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 30963299 - 30963345
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||    
T  30963299 aagatgcatcttgttgatataggtagtacctaacaattcttataagc 30963345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 30961876 - 30961964
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||| ||||||||||||||||||| |  |  |||||||||| ||  ||||||||||||||||||||| ||| ||| ||| |||||||||    
T  30961876 cacgtttaactgtggagttcttatggtttcggctaccgaaaaaaatatgcatcttgttgatataggtagtaccaatcaaatcttataag 30961964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 15639848 - 15639798
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| || |||||||||||||| ||| |||||||||| |||||||    
T  15639848 aaagaagatgtatgttgttgatataggtagtaccaaacaattcctataagc 15639798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 32377712 - 32377749
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa 237  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  32377712 gcttaactgtggagttcttttggaatgagctaccgaaa 32377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 10845036 - 10844878
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10845036 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 10844937  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  10844936 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 10844878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 22026532 - 22026374
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  22026532 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcattcaa 22026433  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||  | ||||||||||||| || ||||||||||    
T  22026432 ccatgcagtcccatacctgcacggcctcacgaaccctctcattccggtg-tgattcggtt 22026374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 27926052 - 27925894
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  27926052 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 27925953  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  27925952 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 27925894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 2044211 - 2044062
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |    
T  2044211 cacgcttaactgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaa 2044112  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  2044111 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 2044062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 196 - 355
Target Start/End: Original strand, 41659097 - 41659256
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  41659097 acacgcttaactgtggagttcttatgtaatgagctatcgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 41659196  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    |||||| |||| ||| | |||||||| |||| | ||||||||||||| || ||||||||||    
T  41659197 accatgcagtcccatacctgcacgacatcaggaaccctctcattccggtg-tgattcggtt 41659256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 10844608 - 10844753
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||| ||||||||||  |||||| |    
T  10844608 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagccttccttcaa 10844707  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | |||| | |||||| | |||||||||||||    
T  10844708 ccatgcagtcccatacctgcaaggcctcaggaaccctctcattccg 10844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 12827247 - 12827392
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  12827247 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 12827346  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||| | |||| ||| | | || | |||||| |||||||||||||||    
T  12827347 ccaagtagtcccatacctacaaggcctcaggatccctctcattccg 12827392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 197 - 344
Target Start/End: Complemental strand, 17103234 - 17103086
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||||||   |||||| |    
T  17103234 cacgcttaaccgtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataagtcttccttcaa 17103135  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 344  Q
    ||||| |||||||| | || ||| |||||| ||| ||||||||||||||    
T  17103134 ccatgcagtctcatacctgtacggcctcaggatctctctcattccgatg 17103086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 22548988 - 22549146
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  22548988 cacgcttaactgtggagtttttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 22549087  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||  |||||| |  |||||||||||| || ||||||||||    
T  22549088 ccatgcagtcacatacctgcacagcctcaggaagcctctcattccggtg-tgattcggtt 22549146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 32292550 - 32292392
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||| | ||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||| |||||| |    
T  32292550 cacgcttaactgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatatagatagtaccaaacaattcttataagcattccttcaa 32292451  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  32292450 ccatgcagtcccatacttgcacggcctcaggaaccctctcattccggtg-tgattcggtt 32292392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 22548542 - 22548687
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    |||||| |    
T  22548542 cacgcttaactgtggagttattatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaaacttccttcaa 22548641  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | |||||  |||||| | |||||||||||||    
T  22548642 ccatgcagtcacatacctgcacagcctcaggaaccctctcattccg 22548687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 28453491 - 28453346
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||| |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||| |||| ||||||||||||||||   || ||| |    
T  28453491 cacgcttaactgtagagttcttatggaatgggctaccataaagaagatgcatcttgttaatataggtagtataaaacaattcttataagttttctttcaa 28453392  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||||||| | ||||||||||| | |||||||||||||||    
T  28453391 ccatgaagtctcatacctgcacgacctcgggatccctctcattccg 28453346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 34308472 - 34308621
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  34308472 cacgcttaagtgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagccttccttcaa 34308571  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||  |||||||| | || ||| |||||| |||||| ||||||||||||    
T  34308572 ccatacagtctcatacttgtacggcctcaggatccctttcattccgatgt 34308621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 8080335 - 8080484
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  8080335 cacgcttaactgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttatcagctttccttcaa 8080434  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | |||| | |||| |||||||||||||||||||    
T  8080435 ccatgtagtcccatacctacacggcttcaggatccctctcattccgatgt 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 25144925 - 25144836
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  25144925 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataagc 25144836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 25147689 - 25147576
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||  |||||| |    
T  25147689 cacgattaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagccttccttcaa 25147590  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  25147589 ccatgcagtctcat 25147576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 27022331 - 27022480
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  27022331 cacgcttaactgtggagttcttatggaatgagctgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataagccttctttcaa 27022430  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | || | |||||  |||||||||||||||||||    
T  27022431 ccatgtagtcccatacctacatggcctcaagatccctctcattccgatgt 27022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 196 - 356
Target Start/End: Original strand, 27819238 - 27819398
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| ||||||||||||||| |||| ||||||||||  |||| |||||||||| |||||||||||||| ||| |||||||||||||| |||  ||||||     
T  27819238 acacacttaactgtggagtttttatggaatgagctattgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttattagccttccttca 27819337  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 356  Q
    |||||| |||||||| | |||| ||| |||  ||||||||||||| |||| |||||||||||    
T  27819338 accatgaagtctcatacttgcatgacttcatgatccctctcattctgatg-tgattcggttt 27819398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 34308928 - 34309081
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata----ggtggtatcaaacaattcttataagcactcct 291  Q
    |||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||    ||| ||| |||||| |||||||||||  ||||    
T  34308928 cacgcttaactgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatatatataggtagtaccaaacagttcttataagccttcct 34309027  T
Q  292 tctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    || |||||  |||||||| | || ||| |||||| |||||||||||||||||||    
T  34309028 tcaaccatacagtctcatacttgtacggcctcaggatccctctcattccgatgt 34309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 188 - 338
Target Start/End: Original strand, 28375038 - 28375189
Alignment:
Q  188 gaattcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagca 286  Q
    |||||||  ||||||||||| || || | |||| ||| |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||     
T  28375038 gaattcaagcacgcttaactatgaagctgttatggaaagagctaccgaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagcc 28375137  T
Q  287 ctccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
     |||||| | |||| |||||||| | |||||| |||||| ||||||||||||    
T  28375138 ttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcatt 28375189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 6464903 - 6465052
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  6464903 cacgcttaactgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 6465002  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||  ||| | | |||| |||||  || ||||||||||| ||||    
T  6465003 ccatgtagttccatacctacacggcctcatgattcctctcattccaatgt 6465052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 25148120 - 25147977
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||   | ||||||||||||||||||  |||||| |    
T  25148120 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagccttccttcaa 25148021  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 339  Q
    | |   |||| ||| | | ||||||||| | |||||||||||||    
T  25148020 cgacacagtcccatacctacacgacctcgggatccctctcattc 25147977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 12100844 - 12100731
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| |||||||||  ||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||||   ||||| |    
T  12100844 cacgcttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataagcttgccttcaa 12100745  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||||||||    
T  12100744 ccatgcagtctcat 12100731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 337
Target Start/End: Original strand, 21316106 - 21316243
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||||||||||||||||  |||||||||| |||| || |||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||  |||||    
T  21316106 cttaactgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatataggtagtaccaaacaattcttttaagcgctcatttaaccat 21316205  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcat 337  Q
      |||||||| | |||||| ||| || |||||||||||    
T  21316206 acagtctcatacctgcacggccttaggatccctctcat 21316243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 345
Target Start/End: Original strand, 22840530 - 22840671
Alignment:
Q  205 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggag 303  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||||||||||||| | ||| |||||||||||||||||   || ||| |||||| ||    
T  22840530 actgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtag 22840629  T
Q  304 tctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |||||| | | ||   |||||| ||| |||||||||||||||    
T  22840630 tctcatacctacaaagcctcaggatctctctcattccgatgt 22840671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 33852251 - 33852394
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||| ||||||||| ||||| |||||| ||| |||||| ||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  33852251 cacgcttaattgtgaagttcttatggaatgggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataagttttccttcaa 33852350  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 339  Q
    ||||  |||||||| | ||||||  ||| | |||||||||||||    
T  33852351 ccatacagtctcatacctgcacggtctcgggatccctctcattc 33852394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 41913123 - 41913034
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||| ||||||||||| ||||| |||||| ||| ||||| ||||||||||||||||||| | | ||||||||||||||||||    
T  41913123 cacgcttaactgcggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagc 41913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 339
Target Start/End: Original strand, 27021911 - 27022015
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||| ||||| || | | || | |||||| ||||||||    
T  27021911 aaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggatccctct 27022010  T
Q  335 cattc 339  Q
    |||||    
T  27022011 cattc 27022015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 350
Target Start/End: Complemental strand, 3745254 - 3745100
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||| ||||||||||| |||| ||||| |||||| ||| |||||||||| |||||| ||||||| |||  ||||| ||||||||||   |||||| |    
T  3745254 cacgcttgactgtggagttattatggaatgggctaccaaaaagaagatgcatattgttggtataggtagtactaaacagttcttataagttttccttcaa 3745155  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgatt 350  Q
    ||||| ||||    || |||||||||| || |||||||||||| |||||| ||||    
T  3745154 ccatgtagtccttagcctgcacgaccttaggatccctctcatttcgatgtggatt 3745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 1297161 - 1297020
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| ||||||| ||||||||||||| |||| | |||||||| ||| ||  ||||||||| ||||||| ||| |||||||||||||||||   | ||||     
T  1297161 acacacttaactatggagttcttatataatgggataccgaaaagaatataaatcttgttggtataggtagtaccaaacaattcttataagttttacttca 1297062  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctca 336  Q
    |||||| |||||||| | |||| || ||||||| ||||||||    
T  1297061 accatgcagtctcatacctgcatgatctcagaacccctctca 1297020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 15819014 - 15819121
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||| ||||||||| ||||| |||||||||| ||||||||||| |||||||||| || ||| ||||||||| || |||||| |||||| ||||||    
T  15819014 ttaactgtg-agttcttatggaatgtgctaccgaaaagaagatgcatcatgttgatatatgtagtaccaaacaatttttctaagcattccttcaaccatg 15819112  T
Q  301 gagtctcat 309  Q
      |||||||    
T  15819113 ttgtctcat 15819121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 31283648 - 31283719
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 271  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  31283648 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaa 31283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 345
Target Start/End: Original strand, 15567548 - 15567698
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    ||||| ||||||| |||||||||||  ||||| ||||| ||| ||||||| ||||||||| |||| || || |||||||||||||||||||  ||||||     
T  15567548 acacgattaactgcggagttcttatgaaatgaactaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaattcttataagccttccttcc 15567647  T
Q  295 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||||  |||| || | ||| |||  |||  ||| |||||||||||||||    
T  15567648 accatgatgtctaatacttgcgcgatgtcaagatctctctcattccgatgt 15567698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 30527479 - 30527563
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||  |||| |||||| ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||    
T  30527479 cttaactgtggagttcttatgaaatgggctacccaaaagaagatgtatcttattgatgtaagtggtaccaaacaattcttataag 30527563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 330
Target Start/End: Complemental strand, 3744788 - 3744657
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||| ||| ||||||||||  |||| |||||| ||| |||| ||||| |||||| ||||||| || ||||||||||||||||||   |||||| ||||    
T  3744788 gcttaattgtagagttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataagtcttccttcaacca 3744689  T
Q  299 tggagtctcatgcatgcacgacctcagaatcc 330  Q
    || |||| ||| | | |||||||||| |||||    
T  3744688 tgcagtcccatacctacacgacctcaaaatcc 3744657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 22705282 - 22705181
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| | |||  |||| ||| | | |||| | |||| ||||||||||||    
T  22705282 aagatgcatcttgttgatataggtagtaccaaacaattcttataacccttccttcaatcatccagtcccatacctacacggcttcaggatccctctcatt 22705183  T
Q  339 cc 340  Q
    ||    
T  22705182 cc 22705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 25307914 - 25307855
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatatag 260  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||| |||||||||||||||    
T  25307914 gcttaactgtggagttcttacagaatgggctacc-aaaaaagatgtatcttgttgatatag 25307855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 30334940 - 30334989
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| |||||||    
T  30334940 aaagaagatgtatcttgttggtataggtagtatcaaacaatttttataag 30334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 6466820 - 6466775
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||    
T  6466820 aagatgcatcttgttggtataggtagtaccaaacaatttttataag 6466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 15568041 - 15568086
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 284  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||    
T  15568041 aagatgcatcttgttgatataggtcataccaaacaattgttataag 15568086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 10453 - 10304
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  10453 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 10354  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| |||||||| |||||| |||||||||||||||||||    
T  10353 ccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgt 10304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 197 - 361
Target Start/End: Original strand, 20896681 - 20896845
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20896681 cacgcttaaccgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20896780  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||||||| | | |||| ||| || |||||||||||||||||| |||||||| |||||||    
T  20896781 ccatgtagtctcatacctacacggcctaaggatccctctcattccgatg-tgattcggcttgtcta 20896845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 197 - 343
Target Start/End: Complemental strand, 13492942 - 13492795
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  13492942 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttccttcaa 13492843  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgat 343  Q
    ||||| |||||||| | |||||  |||||| |||| ||||||||||||    
T  13492842 ccatgcagtctcatacctgcacagcctcaggatccttctcattccgat 13492795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 361
Target Start/End: Original strand, 6330905 - 6331069
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||||   |||||| |    
T  6330905 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataagtcttccttcaa 6331004  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||||||| | | |||| |||||| |||| ||||||||||||| |||||||| |||||||    
T  6331005 ccatgtagtctcatacctacacggcctcaggatccatctcattccgatg-tgattcggcttgtcta 6331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 16520121 - 16519972
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| ||||||  |||||| |    
T  16520121 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataagccttccttcga 16520022  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  16520021 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 16519972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 17027524 - 17027673
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17027524 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17027623  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | |||||| |||| | |||||||||||||||||||    
T  17027624 ccatgcagtcccatacctgcacggcctctggatccctctcattccgatgt 17027673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 17851071 - 17850907
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||| ||||||  |||||| |||| || ||  |    
T  17851071 cacgcttaactgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttatcagcattcttttaa 17850972  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||| ||| | ||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  17850971 ccatgcagtcccatacttgcacgacctcaggatccctctcattccggtg-tgattcggttcgtcta 17850907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 20850474 - 20850316
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||  |||||||||||||||||  |||||| |    
T  20850474 cacgcttaactgtagagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataagccttccttcaa 20850375  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||||| |||||  | ||||||||||||| || ||||||||||    
T  20850374 ccatgcagtcccatacctgcacggcctcatgaaccctctcattccggtg-tgattcggtt 20850316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 355
Target Start/End: Complemental strand, 3652634 - 3652481
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 300  Q
    ||||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||||  |||||| ||||||    
T  3652634 ttaactgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatg 3652535  T
Q  301 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
     |||| ||| | | |||  |||||| |||||||||||||||||| ||||||||||    
T  3652534 tagtcccatacctacacagcctcaggatccctctcattccgatg-tgattcggtt 3652481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 345
Target Start/End: Complemental strand, 7912025 - 7911882
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 301  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| ||||||     
T  7912025 taactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttccttcaaccatgc 7911926  T
Q  302 agtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||  || | |||||| ||||   |||||||||||||||||||    
T  7911925 agtcctatacctgcacggcctcgagatccctctcattccgatgt 7911882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 197 - 371
Target Start/End: Original strand, 20126175 - 20126351
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||| |    
T  20126175 cacgcttaattgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagccttccttcaa 20126274  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcagg 371  Q
    ||||| |||||||| | | |||  ||| || |||||||||||||||||| |||||| | ||||||  |||||||||||    
T  20126275 ccatgtagtctcatacctacacagccttaggatccctctcattccgatg-tgattcagcttgtctagaagttgtcagg 20126351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 7912463 - 7912314
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||| ||||||   |||||| |    
T  7912463 cacgtttaactatggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataagttttccttcaa 7912364  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | |||||| ||||   |||||||||||||||||||    
T  7912363 ccatgcagtcccatacctgcacggcctcgagatccctctcattccgatgt 7912314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 9352215 - 9352066
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| | |||||||    ||||| |    
T  9352215 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataagtctcccttcga 9352116  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||||||| | | |||  |||||| |||||||||||| ||||||    
T  9352115 ccatgtagtctcatacctacacagcctcaggatccctctcatttcgatgt 9352066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 13191506 - 13191615
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  13191506 cacgcttaactgtgaagttcttatggaacgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 13191605  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  13191606 ccatgcagtc 13191615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 13492485 - 13492396
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  13492485 cacgcttaactgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataagc 13492396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 17731102 - 17731255
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatct----tgttgatataggtggtatcaaacaattcttataagcactcct 291  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||    ||||||||||||| ||| |||||||||||||||||   ||||    
T  17731102 cacgcttaaatgtggagttcttaaagaatgagctaccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaattcttataagtcttcct 17731201  T
Q  292 tctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    |  |||||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  17731202 ttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccgatgt 17731255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 27334301 - 27334169
Alignment:
Q  210 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 308  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27334301 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27334202  T
Q  309 tgcatgcacgacctcagaatccctctcattccg 341  Q
    | | ||||||||||||| | ||||||| |||||    
T  27334201 tacctgcacgacctcaggaaccctctcgttccg 27334169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 27395041 - 27394909
Alignment:
Q  210 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 308  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27395041 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27394942  T
Q  309 tgcatgcacgacctcagaatccctctcattccg 341  Q
    | | ||||||||||||| | ||||||| |||||    
T  27394941 tacctgcacgacctcaggaaccctctcgttccg 27394909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 2681209 - 2681367
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||   || ||| |    
T  2681209 cacgcttaattgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataagtcttcattcaa 2681308  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||  | | |||| |||||| | ||||||||||||| || ||||||||||    
T  2681309 ccatgcagtcccaaacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 2681367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 201 - 355
Target Start/End: Original strand, 23986314 - 23986468
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||| ||||||||| |  ||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||   ||||| |||||    
T  23986314 cttaactgtgaagttcttatggtttgagctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataagcctaccttcaaccat 23986413  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    | |||| ||| | | |||| |||| | |||||||||||||||||| ||||||||||    
T  23986414 gtagtcccatacctacacggcctccggatccctctcattccgatg-tgattcggtt 23986468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 9440306 - 9440459
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||| ||||||||| || ||||||||||||| ||| |||||||||||||||||| || ||| | ||||||||||||||||  || ||| |||||    
T  9440306 cttaactgtgaagttcttatggagtgagctaccgaaaagaaaatgcatcttgttgatataagtagtaccgaacaattcttataagctttcattcaaccat 9440405  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggt 354  Q
    | |||  ||| | |||||||| |||| |||||||||||||||||| |||||||||    
T  9440406 gcagttccatacctgcacgacttcaggatccctctcattccgatg-tgattcggt 9440459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 15929736 - 15929646
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  15929736 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagc 15929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 17851527 - 17851363
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||  ||||||||||  || ||  |    
T  17851527 cacgcttaattgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttataagccttcttttaa 17851428  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    ||||| |||| ||| | |||||| |||| | ||||||||||||||| || |||||||||| |||||    
T  17851427 ccatgcagtcccatacttgcacggcctcgggatccctctcattccggtg-tgattcggttcgtcta 17851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 341
Target Start/End: Original strand, 2720560 - 2720702
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaagaa--gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    |||||||||||||||||||| |||||||||||| ||| ||  ||||  ||||||| |||||||| ||| |||||||||||||||||   |||||| ||||    
T  2720560 cttaactgtggagttcttatggaatgagctaccaaaaaaaaagatgtgtcttgttaatataggtagtaccaaacaattcttataagtcttccttcaacca 2720659  T
Q  299 tggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    || |||||||| | ||||||||||  | |||||||||||||||    
T  2720660 tgcagtctcatacctgcacgaccttgggatccctctcattccg 2720702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 361
Target Start/End: Original strand, 31821704 - 31821849
Alignment:
Q  216 cttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatg 314  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||| | ||| |||| |||||||||||||| |||||| |||||| |||||||| | |     
T  31821704 cttatggaatgagctaccaaaaaaaagatgcatcttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcataccta 31821803  T
Q  315 cacgacctcagaatccctctcattccgatgttgattcggtttgtcta 361  Q
    || | |||||  |||||||||||||||||| ||||||||||| ||||    
T  31821804 catggcctcatgatccctctcattccgatg-tgattcggtttctcta 31821849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 11062438 - 11062325
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||  ||||| |||||||||||  |||||| |    
T  11062438 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagccttccttcaa 11062339  T
Q  296 ccatggagtctcat 309  Q
    ||||| ||| ||||    
T  11062338 ccatgtagtttcat 11062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 20735844 - 20735759
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||    
T  20735844 cttaactatggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagc 20735759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 21312124 - 21311981
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||| |||||| |||| |||||||  |||| |||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  21312124 cacgtttaactatggatttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaa 21312025  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 339  Q
    ||||| |||||||| | |||||  |||||  | |||||||||||    
T  21312024 ccatgcagtctcatacctgcacagcctcatgaaccctctcattc 21311981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 21311668 - 21311519
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||| ||||||||||| ||||||||| || ||| ||||||| |||||||| || |||||  || |||||||||||||||||   |||||| |    
T  21311668 cacgcttaactgcggagttcttatggaatgagcttccaaaaagaagatggatcttgtttatctaggtaataccaaacaattcttataaggcttccttcaa 21311569  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | || ||| |||||  | |||||||||||||||||    
T  21311568 ccatgcagtcccatacttgtacggcctcatgaaccctctcattccgatgt 21311519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 198 - 341
Target Start/End: Complemental strand, 23776592 - 23776449
Alignment:
Q  198 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| || || |||||||||||   |||||| ||    
T  23776592 acgcttaa-tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataagtcttccttcaac 23776494  T
Q  297 catggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    |||| |||| ||| | | || | |||||| || ||||||||||||    
T  23776493 catgtagtcccatacctacaaggcctcaggatacctctcattccg 23776449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 197 - 323
Target Start/End: Original strand, 2890832 - 2890959
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||| ||||| | |||||||| ||||||| ||||||||||| ||  | |||||||||||||| |  |||||| |    
T  2890832 cacgcttaactgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaaccttccttcaa 2890931  T
Q  296 ccatggagtctcatgcatgcacgacctc 323  Q
    ||||| |||| ||| | |||||| ||||    
T  2890932 ccatgcagtcccatacctgcacggcctc 2890959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 341
Target Start/End: Original strand, 14771716 - 14771857
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    |||||||||||||||||||| ||||    ||||  |||||| ||| ||||||||||||||||| ||| |||||||||||||||||   |||||| |||||    
T  14771716 cttaactgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccat 14771815  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    | |||||||| | | |||| | || | |||||||||||||||    
T  14771816 gcagtctcatacctacacggcttcgggatccctctcattccg 14771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 28583112 - 28583027
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||| ||||||| ||||||| |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |||||||||||||    
T  28583112 cttagctgtggatttcttatggaatgaactaccggaaagatgatgcatcttgttgatatagatcgtatcaaataattcttataagc 28583027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 28065831 - 28065980
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctacc----gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||| |||||||||||||| |||| |||||||     ||| ||||||||||||||||||| || | ||| ||||||||||||||||||  || ||| |    
T  28065831 gcttaattgtggagttcttatggaataagctaccaaaaaaaaaaagatgcatcttgttgatagagatagtaccaaacaattcttataagctttcattcaa 28065930  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
     |||  ||||||||   | |||||||| || |||||||||||||||||||    
T  28065931 tcatacagtctcatttctacacgaccttaggatccctctcattccgatgt 28065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 9440849 - 9440973
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 294  Q
    |||| |||||||||| ||||||||| |  || ||||| |||| ||| |||||||||||||||| | || ||| |||| |||||||||||||| ||||||     
T  9440849 acacacttaactgtgaagttcttatggtttgggctactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaattcttataagcattccttca 9440948  T
Q  295 accatggagtctcatgcatgcacga 319  Q
    |||||| |||  ||||| |||||||    
T  9440949 accatgtagttccatgcctgcacga 9440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 15929338 - 15929263
Alignment:
Q  211 gagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||   || ||||||||||||||||||    
T  15929338 gagttcttatggaatgagctaccgaaaagaatatgcatcttattgatataggcattaccaaacaattcttataagc 15929263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 17205479 - 17205405
Alignment:
Q  209 tggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 283  Q
    |||||||||||| ||||| |||||| ||| |||||| ||||||||| || |||| ||| ||||||||||||||||    
T  17205479 tggagttcttatggaatgggctaccaaaacaagatgaatcttgttggtaaaggtagtaccaaacaattcttataa 17205405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 28780263 - 28780209
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  28780263 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 28780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 9440493 - 9440570
Alignment:
Q  268 caaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||||||||||||||||  || ||| |||||| |||| ||| | |||||||| |||| |||||||||||||||||||    
T  9440493 caaacaattcttataagccttcattcaaccatgaagtcccatacctgcacgacttcaggatccctctcattccgatgt 9440570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 1991701 - 1991617
Alignment:
Q  202 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    ||||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||| ||  || |||||||||||| |||||    
T  1991701 ttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgtttagatatgtaataccaaacaattcttgtaagc 1991617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 345
Target Start/End: Complemental strand, 32292995 - 32292889
Alignment:
Q  239 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 338  Q
    |||||| || |||||| ||||||| ||| ||||||||||||||||||  || ||| |||||| |||||||| | ||||||| || || ||  ||||||||    
T  32292995 aagatgtattttgttggtataggtagtaccaaacaattcttataagccttcattcaaccatgcagtctcatacctgcacgatctaaggatttctctcatt 32292896  T
Q  339 ccgatgt 345  Q
    || ||||    
T  32292895 ccaatgt 32292889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 33774994 - 33775101
Alignment:
Q  196 acacgcttaactgtggagttcttatagaatgagcta-ccgaaagaagatgca--tcttgttgatataggtggtatcaaacaattcttataagcactcctt 292  Q
    |||| |||||||||||||||||||| |||||  ||| |  ||||||||||||  |||||||||||||||| | | || ||||||||||||| |  |||||    
T  33774994 acacacttaactgtggagttcttatggaatggactatcaaaaagaagatgcatctcttgttgatataggtagcaccagacaattcttataatccttcctt 33775093  T
Q  293 ctaccatg 300  Q
    | ||||||    
T  33775094 caaccatg 33775101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 20732727 - 20732642
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 285  Q
    |||||| || ||||| |||| ||||| |||||||||| ||| |||||| || || |||||||| ||| |||| |||||||||||||    
T  20732727 cttaaccgtagagtttttattgaatgggctaccgaaaagaatatgcatattattaatataggtagtaccaaataattcttataagc 20732642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 2044 - 2187
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2044 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2143  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 339  Q
    ||||| |||||||| | |||||| |||||| | |||| ||||||    
T  2144 ccatgcagtctcatacctgcacggcctcaggaaccctttcattc 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 19119 - 18970
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  19119 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 19020  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | |||||| |||| | |||||||||||||||||||    
T  19019 ccatgcagtcccatacctgcacggcctctggatccctctcattccgatgt 18970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 18128 - 18276
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 296  Q
    |||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||   |||||| ||    
T  18128 cacgcttaactgtggagttcttatggaattagctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaac 18227  T
Q  297 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
     ||| |||| ||| | | |||| |||||| |||||||||||||||||||    
T  18228 tatgtagtcacatacctacacggcctcaggatccctctcattccgatgt 18276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 17591 - 17740
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||||||||||||||||  | ||||||||| ||| |||||| |||| ||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17591 cacgcttaactgtggagttcttatgaattgagctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttataagctttccttcaa 17690  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | |||| |||||| ||||||||||||| |||||    
T  17691 ccatgtagtcccatacctacacggcctcaggatccctctcattctgatgt 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 2895 - 2746
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2895 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2796  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | | |||| |||||| |||||||||||| ||||||    
T  2795 ccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgt 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 105873 - 105724
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  105873 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataagccttccttcaa 105774  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    || || |||  ||| | || ||| |||||| |||||||||||||||||||    
T  105773 ccctgcagttccatacctgtacggcctcaggatccctctcattccgatgt 105724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 78; Significance: 3e-36; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 162671 - 162820
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  162671 cacgcttaactgcggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagtcttccttcaa 162770  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  162771 ccatgcagtcacatacctgtacggcctcaggatccctctcattccgatgt 162820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 69814 - 69921
Alignment:
Q  203 taactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 301  Q
    |||||||||||||||||| ||||||||||  |||| || |||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||| || |||     
T  69814 taactgtggagttcttatggaatgagctaatgaaaaaaagatgcatcatgttgatataggtagtaccaaacaattattataagcattccttcaacgatgc 69913  T
Q  302 agtctcat 309  Q
    ||||||||    
T  69914 agtctcat 69921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 163224 - 163167
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 253  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  163224 cacgcttaactgtggaattcttaaagaatgagctaccgaaaagaagatgcatcttgtt 163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 163127 - 163181
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  163127 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 1373 - 1215
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  1373 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagccttccttcaa 1274  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    ||||| |||| ||| | |||| | |||||| | || |||||||||| || ||||||||||    
T  1273 ccatgcagtcccatacctgcatggcctcaggaaccgtctcattccggtg-tgattcggtt 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 2203 - 2352
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    ||||||||||| | |||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2203 cacgcttaactattgagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2302  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||||| |||| ||| | |||||| ||| || |||| ||||||||||||||    
T  2303 ccatgtagtcccatacctgcacggccttaggatccttctcattccgatgt 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 355
Target Start/End: Complemental strand, 4710 - 4556
Alignment:
Q  201 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 299  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||| |  |||||| |||||    
T  4710 cttaactgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaaaccttccttcaaccat 4611  T
Q  300 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    | |||| ||| | |||| | |||||| | ||||||| |||||||| ||||||||||    
T  4610 gcagtcccatacctgcatggcctcaggaaccctctccttccgatg-tgattcggtt 4556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 5174 - 5091
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctt 279  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||    
T  5174 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattctt 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 235 - 345
Target Start/End: Original strand, 142306 - 142416
Alignment:
Q  235 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 334  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||| |||||| |||| ||| | |||||| |||||| ||||||||    
T  142306 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctct 142405  T
Q  335 cattccgatgt 345  Q
    |||||||||||    
T  142406 cattccgatgt 142416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 154910 - 154765
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  154910 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 154811  T
Q  296 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 341  Q
    ||||| |||| ||| | | || | |||||| | |||||||||||||    
T  154810 ccatgtagtcccatacctacaaggcctcaggagccctctcattccg 154765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 207 - 345
Target Start/End: Complemental strand, 245228 - 245090
Alignment:
Q  207 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 306  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||| |||||| ||||     
T  245228 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcc 245129  T
Q  307 catgcatgcacgacctcagaatccctctcattccgatgt 345  Q
    ||| | | || | |||||| |||||||||||||||||||    
T  245128 catacctacatggcctcaggatccctctcattccgatgt 245090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 245668 - 245559
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 295  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  245668 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 245569  T
Q  296 ccatggagtc 305  Q
    ||||| ||||    
T  245568 ccatgaagtc 245559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 13526 - 13592
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggt 262  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13526 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggt 13592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 339
Target Start/End: Original strand, 3993 - 4118
Alignment:
Q  215 tcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcat 313  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||| || ||| |||| ||| | |    
T  3993 tcttataaaatgggctaccaaaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacct 4092  T
Q  314 gcacgacctcagaatccctctcattc 339  Q
    ||||| |||| | |||||||||||||    
T  4093 gcacggcctcgggatccctctcattc 4118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 23785 - 23668
Alignment:
Q  237 agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctca 336  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||| ||| | |||||| |||||  | ||||||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctca 23686  T
Q  337 ttccgatgttgattcggtt 355  Q
    || || || ||||||||||    
T  23685 tttcggtg-tgattcggtt 23668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 2255 - 2154
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 298  Q
    ||||||||||||||||||||  ||||| |||||| ||| |||||||||||||||| |||||||  ||| ||||||||||||||||||  |||||| ||||    
T  2255 gcttaactgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagccttccttcaacca 2156  T
Q  299 tg 300  Q
    ||    
T  2155 tg 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 293
Target Start/End: Complemental strand, 14891 - 14797
Alignment:
Q  200 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttc 293  Q
    ||||||||||| |||||||||  |||||  |||||||| || |||||||||| |||||||||||  || ||||||||||||||||||| ||||||    
T  14891 gcttaactgtgaagttcttattcaatgaattaccgaaaagacgatgcatcttattgatataggtattaccaaacaattcttataagcattccttc 14797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 14695 - 14749
Alignment:
Q  197 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 250  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  14695 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 14749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 355
Target Start/End: Complemental strand, 26211 - 26064
Alignment:
Q  209 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctc 307  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| || ||| |||| ||||  |||||||  |  | | |||||| ||||||    
T  26211 tggagttcttataaaatgagctaccaaaaagaagatgcatcatgttgatatatgtagtaccaaaaaatttgtataagccattatgcaaccatgaagtctc 26112  T
Q  308 atgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 355  Q
    |  | |||||| ||| || ||||||||| ||| |||||  ||||||||    
T  26111 acacctgcacggccttaggatccctctctttctgatgtaaattcggtt 26064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University