View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20764_high_31 (Length: 378)
Name: NF20764_high_31
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20764_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 12 - 363
Target Start/End: Complemental strand, 8764416 - 8764064
Alignment:
| Q |
12 |
cttttgcatcacaatcaaggaaatattccattcttatgtattttatggtgtctaacatttattgtacatgcaaaaatatatttcatggtggctaacattt |
111 |
Q |
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| T |
8764416 |
cttttgcatcacaatcaaggaaatattccactcttatgtattttatggtggctaagatttattgtacatgcaaaaatatatttcacggtggctaacattt |
8764317 |
T |
|
| Q |
112 |
attgtattttataatt-caataaaactaataattcttcatttcgttattgagtttcagttgttactgccaaagatgctcgtcatgctttgatcactcttc |
210 |
Q |
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| T |
8764316 |
attgtattttataatttcaataaaactaataattcttcatttcgttattgagtttcagttgttactgccaaagatgctcgtcatgctttgatcactcttc |
8764217 |
T |
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| Q |
211 |
aagaaaatgaaggcatgtttgatatcgttattacagaatttcatctggtgggaatgaatgggttagaattccaaaagcatattaaagatcaattccagat |
310 |
Q |
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|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8764216 |
aagaaaatgaaggcttgtttgatctcgttattacagaatttcatctggtgggaatgaatgggttagaattccaaaagcatattaaagatcaattccagat |
8764117 |
T |
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| Q |
311 |
acctataataagtaagtgtgtcactcttacacattaaataaacattgcaattg |
363 |
Q |
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| T |
8764116 |
acctataataagtaagtgtgtcactcttacacattaaataaacattgcaattg |
8764064 |
T |
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