View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20764_high_63 (Length: 274)
Name: NF20764_high_63
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20764_high_63 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 19506690 - 19506445
Alignment:
| Q |
13 |
aatataagtaaatgaggattagaaataacctttaatggaagcaagtaacgaatgtacatgtatctttggaagctattcatgttttccaatactgtaactt |
112 |
Q |
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| T |
19506690 |
aatataagtaaatgaggattagaaataacctttaatggaagcaagtaacgaatgtacatgtatctttggaagctattcatattttccaataccgtaactt |
19506591 |
T |
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| Q |
113 |
taccaactttgatggcttttccttccttgtcaaaacatggttttgccgtaaaatatctgaagctgtagtctctgagactctcatatctcactggattccc |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
19506590 |
taccaactttgatggcttttccttccttgtcaaaacatggttttgccgtaaaatatctgaagcagtagtctctgagactctcatatctcactggattccc |
19506491 |
T |
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| Q |
213 |
aacagatgaacccacatgatatatgctatcatcacaaggttgattt |
258 |
Q |
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|||||||||||| || |||||||||||||||||||||||||||||| |
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| T |
19506490 |
aacagatgaacctacgtgatatatgctatcatcacaaggttgattt |
19506445 |
T |
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