View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20764_high_83 (Length: 239)
Name: NF20764_high_83
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20764_high_83 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 33949228 - 33949063
Alignment:
| Q |
66 |
ccttaaatttgttcttttgtggtcgcaatatttaattaa-ttagtaatcgtgttaatctttagaatatttgcatgtgctagttttcttgtaagaaacact |
164 |
Q |
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| T |
33949228 |
ccttaaatttgttcttttgtggtcgcaatatttaattaaattagtaatcgtgttaatctttagaatatttgcatgtgctagttttcttgtaagaaacact |
33949129 |
T |
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| Q |
165 |
tcataacattatccaccggaataaccttgcaaaaacttatgaaggtgctcagtagtggttgatgat |
230 |
Q |
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| T |
33949128 |
tcataacattatccaccggaataaccttgcaaaaacttatgaaggtgctccgtagtggttgatgat |
33949063 |
T |
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