View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20764_low_38 (Length: 350)
Name: NF20764_low_38
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20764_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 2 - 333
Target Start/End: Complemental strand, 38119940 - 38119609
Alignment:
| Q |
2 |
cgaagaaaatgtttcatagtttttagcattttacaaagtttttgacatcttttgaacgtgagcttattaaattaccaagcctgtaaagttaattatatca |
101 |
Q |
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| T |
38119940 |
cgaaaaaaatgtttcatagtttttagcattttacaaagtttttgacatcttttgaacgtgagcttattaaattaccaagcctgtaaagttaattatatca |
38119841 |
T |
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| Q |
102 |
tcttctgccaagatcatgcttatgctaaaacattaataaaattcactgaactgtaaccggtccatatataaccattattaaagtgtatgagtgtataatc |
201 |
Q |
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| T |
38119840 |
tcttctgccaagatcatgcttatgctaaaacattaataaaattcactgaactgtaaccggtccatatataaccattattaaagtgtatgagtgtataatc |
38119741 |
T |
|
| Q |
202 |
agaactcggaaggcatacaaaaactaatacaaaaagcaaccagttgcaggcataaattcctatgagcatctatgaatgctgatgcacattaacagtttaa |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
38119740 |
agaactcggaaggcatacaaaaactaatacaaaaagcaaccagttgcaggcataaattcctatgagcatctatgaatgctgatgcacatcaacagtttaa |
38119641 |
T |
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| Q |
302 |
tggatgatgccagaaaccattacaattgctat |
333 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
38119640 |
tggatgatgccagaaaccattacaattgctat |
38119609 |
T |
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