View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20764_low_49 (Length: 304)
Name: NF20764_low_49
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20764_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 32 - 291
Target Start/End: Complemental strand, 48480929 - 48480670
Alignment:
| Q |
32 |
ttctaaatcaatccaaatcctaattttataataagattcaaaattgatgtttgttttccaaatcaaattaaatcatttatgattacgttaagattacaaa |
131 |
Q |
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| T |
48480929 |
ttctaaatcaatccaaattctaattttataataagtttcaaaattgatgtttgttttccaaatcaaattaaatcatttatgattacattaagattacaaa |
48480830 |
T |
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| Q |
132 |
cacagtggtggcactgactgtagagtcatgcaaatgcttatcgggtttcttttggactcttggttatgtcgtttataatggccagtttttgaagtgttat |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
48480829 |
cacagtggtggcactgactgtagagtcatgcaaatgcttatcaggtttcttttggactcttggttatgtcgtttataatggcctgtttttgaagtgttat |
48480730 |
T |
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| Q |
232 |
tgtttgctgctaacattaggtttcattgtacttttaatctgaatactgaatgaataaatt |
291 |
Q |
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| T |
48480729 |
tgtttgctgctaacattaggtttcattgtacttttaatctgaatactgaatgaataaatt |
48480670 |
T |
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