View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20764_low_66 (Length: 266)

Name: NF20764_low_66
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20764_low_66
NF20764_low_66
[»] chr3 (54 HSPs)
chr3 (4-248)||(3899835-3900079)
chr3 (37-239)||(31284152-31284354)
chr3 (98-247)||(27187197-27187347)
chr3 (37-235)||(28561814-28562011)
chr3 (37-239)||(8067348-8067550)
chr3 (97-246)||(50347874-50348023)
chr3 (37-246)||(11179903-11180112)
chr3 (37-246)||(13150423-13150632)
chr3 (97-246)||(16811509-16811656)
chr3 (97-246)||(13149968-13150117)
chr3 (37-246)||(14820222-14820431)
chr3 (98-246)||(32227090-32227238)
chr3 (98-246)||(32227629-32227777)
chr3 (37-253)||(7493949-7494165)
chr3 (97-239)||(39653292-39653434)
chr3 (4-77)||(3890013-3890086)
chr3 (97-246)||(14814077-14814226)
chr3 (37-253)||(7477259-7477475)
chr3 (37-165)||(29224392-29224520)
chr3 (97-239)||(32386610-32386752)
chr3 (98-233)||(53150694-53150829)
chr3 (97-246)||(16811053-16811202)
chr3 (97-254)||(37045163-37045317)
chr3 (37-233)||(25802430-25802626)
chr3 (97-239)||(20884993-20885135)
chr3 (96-176)||(15377411-15377491)
chr3 (98-254)||(4067221-4067377)
chr3 (96-176)||(15388270-15388350)
chr3 (96-176)||(15392637-15392717)
chr3 (96-176)||(15405673-15405753)
chr3 (96-176)||(15417498-15417578)
chr3 (96-219)||(15411082-15411205)
chr3 (37-233)||(25230587-25230783)
chr3 (37-233)||(25238174-25238370)
chr3 (37-169)||(41472368-41472500)
chr3 (97-158)||(2911223-2911284)
chr3 (96-166)||(15410628-15410698)
chr3 (97-219)||(25238580-25238702)
chr3 (174-239)||(25239003-25239068)
chr3 (37-219)||(30529755-30529936)
chr3 (96-176)||(15376123-15376203)
chr3 (37-77)||(25248179-25248219)
chr3 (37-77)||(32796973-32797013)
chr3 (96-163)||(15396492-15396559)
chr3 (97-136)||(39641065-39641104)
chr3 (96-142)||(15381257-15381303)
chr3 (99-153)||(41474127-41474181)
chr3 (174-239)||(41473746-41473811)
chr3 (37-77)||(4067398-4067438)
chr3 (37-77)||(20885155-20885195)
chr3 (37-77)||(25239115-25239155)
chr3 (37-77)||(26310027-26310067)
chr3 (37-77)||(32386772-32386812)
chr3 (37-77)||(50347814-50347854)
[»] scaffold0137 (1 HSPs)
scaffold0137 (4-254)||(6976-7226)
[»] chr1 (44 HSPs)
chr1 (37-246)||(20054405-20054614)
chr1 (37-246)||(20054861-20055070)
chr1 (37-246)||(20055317-20055526)
chr1 (37-246)||(20055773-20055982)
chr1 (37-246)||(20056229-20056438)
chr1 (37-246)||(20057132-20057341)
chr1 (37-246)||(20057588-20057797)
chr1 (37-246)||(38340974-38341183)
chr1 (40-246)||(20056685-20056891)
chr1 (37-239)||(20845537-20845739)
chr1 (37-246)||(20053949-20054158)
chr1 (37-246)||(20060209-20060418)
chr1 (37-246)||(52250274-52250483)
chr1 (97-246)||(16451802-16451951)
chr1 (97-246)||(16460955-16461104)
chr1 (101-246)||(50002944-50003089)
chr1 (97-246)||(52250671-52250820)
chr1 (97-246)||(52251008-52251157)
chr1 (37-253)||(50002569-50002785)
chr1 (37-246)||(46693604-46693813)
chr1 (37-239)||(35759484-35759686)
chr1 (97-239)||(51372750-51372892)
chr1 (39-240)||(43056940-43057141)
chr1 (37-219)||(43057419-43057601)
chr1 (37-167)||(23180798-23180928)
chr1 (37-180)||(35760849-35760992)
chr1 (36-77)||(2634991-2635032)
chr1 (98-239)||(7229819-7229960)
chr1 (97-134)||(12728120-12728157)
chr1 (37-143)||(50002257-50002363)
chr1 (101-177)||(16907366-16907442)
chr1 (98-219)||(46411034-46411151)
chr1 (105-156)||(8278093-8278144)
chr1 (188-239)||(35759940-35759991)
chr1 (149-239)||(31822995-31823085)
chr1 (37-143)||(31822635-31822741)
chr1 (37-77)||(20061229-20061269)
chr1 (37-76)||(12883592-12883631)
chr1 (97-134)||(35009977-35010014)
chr1 (37-77)||(2328383-2328423)
chr1 (37-77)||(16451971-16452011)
chr1 (37-77)||(16461124-16461164)
chr1 (37-77)||(16907302-16907342)
chr1 (99-131)||(30872934-30872966)
[»] chr5 (44 HSPs)
chr5 (39-246)||(34371682-34371889)
chr5 (37-239)||(17445331-17445533)
chr5 (37-246)||(189136-189345)
chr5 (41-246)||(3886926-3887131)
chr5 (39-246)||(34372138-34372345)
chr5 (41-246)||(3886470-3886675)
chr5 (37-246)||(8641904-8642112)
chr5 (39-239)||(2474475-2474675)
chr5 (37-219)||(1821974-1822156)
chr5 (97-246)||(15512881-15513030)
chr5 (98-254)||(29679968-29680124)
chr5 (37-246)||(42788515-42788724)
chr5 (97-234)||(8391203-8391340)
chr5 (37-195)||(21886066-21886224)
chr5 (100-254)||(22557100-22557255)
chr5 (37-246)||(24182115-24182323)
chr5 (37-239)||(2474027-2474219)
chr5 (37-219)||(10927299-10927481)
chr5 (93-180)||(30684491-30684578)
chr5 (97-246)||(20858411-20858559)
chr5 (91-167)||(4102918-4102994)
chr5 (37-155)||(2193884-2194002)
chr5 (37-219)||(27646731-27646913)
chr5 (94-239)||(30684887-30685032)
chr5 (100-239)||(22556667-22556807)
chr5 (97-231)||(18304559-18304693)
chr5 (94-219)||(30720156-30720281)
chr5 (120-216)||(2058557-2058653)
chr5 (97-233)||(18750078-18750214)
chr5 (102-197)||(16370629-16370724)
chr5 (97-239)||(11757157-11757299)
chr5 (97-219)||(20039371-20039493)
chr5 (37-183)||(10926878-10927024)
chr5 (93-180)||(30719740-30719827)
chr5 (97-167)||(5785973-5786043)
chr5 (37-143)||(34867858-34867964)
chr5 (97-134)||(39147067-39147104)
chr5 (37-76)||(20039513-20039552)
chr5 (41-141)||(32574632-32574732)
chr5 (188-246)||(2194023-2194081)
chr5 (98-219)||(8366595-8366715)
chr5 (190-239)||(21883961-21884010)
chr5 (37-77)||(18750234-18750274)
chr5 (41-77)||(22556608-22556644)
[»] scaffold0322 (2 HSPs)
scaffold0322 (98-246)||(19095-19243)
scaffold0322 (37-77)||(19034-19074)
[»] chr6 (39 HSPs)
chr6 (37-246)||(17027400-17027609)
chr6 (37-246)||(23986186-23986395)
chr6 (37-246)||(20850389-20850598)
chr6 (97-246)||(9352190-9352339)
chr6 (97-246)||(7912438-7912587)
chr6 (37-239)||(13191389-13191591)
chr6 (37-246)||(7911946-7912155)
chr6 (97-239)||(13492460-13492603)
chr6 (37-246)||(13492857-13493067)
chr6 (97-246)||(28780238-28780387)
chr6 (91-239)||(9440733-9440881)
chr6 (37-239)||(20896563-20896766)
chr6 (97-240)||(2890714-2890857)
chr6 (97-171)||(16520096-16520170)
chr6 (98-246)||(23776570-23776717)
chr6 (37-246)||(2681089-2681294)
chr6 (97-239)||(2720439-2720581)
chr6 (97-235)||(12194456-12194593)
chr6 (100-253)||(17730971-17731124)
chr6 (104-232)||(3652658-3652786)
chr6 (99-239)||(17851048-17851188)
chr6 (143-239)||(28583138-28583234)
chr6 (97-240)||(9440184-9440327)
chr6 (97-239)||(31415965-31416106)
chr6 (98-254)||(21312100-21312256)
chr6 (97-197)||(28065754-28065853)
chr6 (97-239)||(11062413-11062555)
chr6 (115-254)||(3653048-3653183)
chr6 (97-183)||(15929710-15929796)
chr6 (98-217)||(1991682-1991801)
chr6 (97-239)||(2891170-2891311)
chr6 (98-130)||(6330897-6330929)
chr6 (37-77)||(6330950-6330990)
chr6 (37-77)||(17205407-17205447)
chr6 (37-77)||(20735763-20735803)
chr6 (37-77)||(21312039-21312079)
chr6 (37-73)||(27334229-27334265)
chr6 (37-73)||(27394969-27395005)
chr6 (37-69)||(32292953-32292985)
[»] chr7 (47 HSPs)
chr7 (97-247)||(28495982-28496132)
chr7 (37-246)||(2189212-2189421)
chr7 (37-246)||(9125027-9125236)
chr7 (37-239)||(2941633-2941835)
chr7 (37-246)||(2193324-2193533)
chr7 (37-246)||(13125004-13125214)
chr7 (37-239)||(42515612-42515814)
chr7 (97-246)||(13122373-13122523)
chr7 (97-239)||(34405467-34405609)
chr7 (97-246)||(7646347-7646496)
chr7 (97-254)||(7646543-7646700)
chr7 (98-246)||(36422381-36422528)
chr7 (97-219)||(43776186-43776308)
chr7 (98-246)||(18833415-18833563)
chr7 (39-254)||(29038881-29039096)
chr7 (37-221)||(5406481-5406666)
chr7 (37-254)||(6718936-6719152)
chr7 (97-216)||(2466052-2466171)
chr7 (97-246)||(28495488-28495626)
chr7 (37-171)||(2465801-2465935)
chr7 (97-256)||(42515220-42515379)
chr7 (149-246)||(26419104-26419201)
chr7 (101-252)||(22529098-22529249)
chr7 (148-246)||(43233136-43233234)
chr7 (93-154)||(11372575-11372636)
chr7 (97-168)||(679944-680015)
chr7 (91-169)||(1628835-1628913)
chr7 (188-254)||(6747937-6748003)
chr7 (37-179)||(25182429-25182571)
chr7 (97-134)||(35527102-35527139)
chr7 (97-134)||(46425869-46425906)
chr7 (37-77)||(6747636-6747676)
chr7 (37-77)||(11517427-11517467)
chr7 (188-239)||(6747482-6747533)
chr7 (39-74)||(36015452-36015487)
chr7 (37-76)||(42515160-42515199)
chr7 (97-159)||(20966179-20966241)
chr7 (97-219)||(35474017-35474139)
chr7 (37-219)||(29357352-29357534)
chr7 (98-219)||(37671657-37671778)
chr7 (37-77)||(2611690-2611730)
chr7 (98-254)||(3305209-3305365)
chr7 (99-219)||(9623337-9623457)
chr7 (37-77)||(35474159-35474199)
chr7 (37-77)||(36422320-36422360)
chr7 (37-77)||(43233481-43233521)
chr7 (37-77)||(46425809-46425849)
[»] scaffold0005 (3 HSPs)
scaffold0005 (37-246)||(245154-245359)
scaffold0005 (96-246)||(245675-245825)
scaffold0005 (37-128)||(245583-245674)
[»] chr4 (72 HSPs)
chr4 (37-246)||(14572017-14572222)
chr4 (37-246)||(49998704-49998913)
chr4 (37-247)||(17628579-17628789)
chr4 (97-246)||(4127281-4127430)
chr4 (37-254)||(44470730-44470946)
chr4 (96-246)||(14571551-14571701)
chr4 (37-246)||(27578320-27578529)
chr4 (97-246)||(7678485-7678634)
chr4 (97-246)||(35871755-35871904)
chr4 (37-251)||(44471183-44471397)
chr4 (37-197)||(12691911-12692071)
chr4 (91-218)||(27578177-27578304)
chr4 (97-246)||(23350146-23350295)
chr4 (37-246)||(24629299-24629505)
chr4 (91-246)||(13266208-13266363)
chr4 (102-232)||(8467690-8467815)
chr4 (97-254)||(23943097-23943254)
chr4 (97-217)||(27578801-27578921)
chr4 (37-219)||(4127779-4127961)
chr4 (101-197)||(4185847-4185943)
chr4 (37-253)||(3169274-3169490)
chr4 (97-216)||(27026630-27026749)
chr4 (37-197)||(50814737-50814897)
chr4 (37-246)||(50398401-50398610)
chr4 (119-197)||(26200205-26200283)
chr4 (37-239)||(1645619-1645821)
chr4 (37-249)||(23976078-23976291)
chr4 (97-175)||(11828419-11828497)
chr4 (97-155)||(24628931-24628989)
chr4 (97-170)||(17029458-17029531)
chr4 (37-234)||(1464215-1464411)
chr4 (97-219)||(17029002-17029124)
chr4 (99-175)||(23091444-23091521)
chr4 (37-170)||(21220271-21220403)
chr4 (37-128)||(14571702-14571793)
chr4 (188-246)||(15268036-15268094)
chr4 (97-219)||(23942679-23942801)
chr4 (188-246)||(35477879-35477937)
chr4 (39-77)||(43928995-43929033)
chr4 (37-77)||(8467832-8467872)
chr4 (37-246)||(31817716-31817924)
chr4 (37-246)||(50398857-50399065)
chr4 (89-216)||(41870038-41870165)
chr4 (97-143)||(15306057-15306103)
chr4 (105-254)||(21067418-21067567)
chr4 (98-239)||(51331153-51331292)
chr4 (37-77)||(4127469-4127509)
chr4 (37-77)||(4185783-4185823)
chr4 (37-77)||(23942821-23942861)
chr4 (37-77)||(24629009-24629049)
chr4 (91-142)||(17629090-17629140)
chr4 (98-141)||(20306132-20306175)
chr4 (149-244)||(31817003-31817098)
chr4 (38-77)||(33764929-33764968)
chr4 (161-239)||(7381459-7381537)
chr4 (97-219)||(9423748-9423870)
chr4 (97-219)||(21067859-21067981)
chr4 (97-134)||(29628643-29628680)
chr4 (201-246)||(50399336-50399381)
chr4 (97-134)||(53996090-53996127)
chr4 (37-77)||(7678654-7678694)
chr4 (37-77)||(9423890-9423930)
chr4 (99-219)||(13613788-13613908)
chr4 (37-77)||(20306193-20306233)
chr4 (37-77)||(21067350-21067390)
chr4 (37-77)||(23091543-23091583)
chr4 (37-77)||(23350315-23350355)
chr4 (37-77)||(27026571-27026611)
chr4 (37-77)||(27029345-27029385)
chr4 (37-73)||(29628703-29628739)
chr4 (37-77)||(31817430-31817470)
chr4 (37-77)||(52048698-52048738)
[»] scaffold0024 (1 HSPs)
scaffold0024 (37-246)||(105788-105997)
[»] chr8 (44 HSPs)
chr8 (37-246)||(22548418-22548627)
chr8 (37-246)||(22548864-22549073)
chr8 (37-246)||(41658974-41659183)
chr8 (97-246)||(34308804-34308953)
chr8 (37-246)||(34308348-34308557)
chr8 (97-254)||(17103209-17103367)
chr8 (37-246)||(22026447-22026657)
chr8 (37-246)||(25147604-25147812)
chr8 (98-251)||(12100820-12100972)
chr8 (37-239)||(27022215-27022416)
chr8 (97-254)||(31283513-31283669)
chr8 (37-246)||(12827123-12827332)
chr8 (97-239)||(25148095-25148236)
chr8 (97-254)||(10844476-10844633)
chr8 (37-254)||(27925967-27926183)
chr8 (98-239)||(21315986-21316126)
chr8 (97-219)||(32292525-32292647)
chr8 (37-254)||(8080203-8080420)
chr8 (121-246)||(32292093-32292218)
chr8 (97-233)||(2044186-2044322)
chr8 (97-217)||(3745229-3745349)
chr8 (37-154)||(25144840-25144957)
chr8 (42-254)||(15818877-15819088)
chr8 (99-254)||(15567870-15568025)
chr8 (121-254)||(6466408-6466541)
chr8 (97-239)||(41913098-41913240)
chr8 (98-167)||(6466835-6466904)
chr8 (97-197)||(10729604-10729704)
chr8 (37-129)||(10844951-10845043)
chr8 (100-239)||(25307895-25308034)
chr8 (37-77)||(6466778-6466818)
chr8 (37-77)||(22705240-22705280)
chr8 (37-77)||(27021917-27021957)
chr8 (37-72)||(1297075-1297110)
chr8 (37-76)||(6464949-6464988)
chr8 (97-216)||(28453466-28453585)
chr8 (39-77)||(21316147-21316185)
chr8 (97-134)||(6464891-6464928)
chr8 (41-77)||(6466329-6466365)
chr8 (37-77)||(15567594-15567634)
chr8 (37-77)||(22840567-22840607)
chr8 (37-77)||(27819284-27819324)
chr8 (37-77)||(28375092-28375132)
chr8 (97-217)||(33852156-33852276)
[»] chr2 (39 HSPs)
chr2 (37-246)||(33771069-33771278)
chr2 (37-246)||(25337866-25338075)
chr2 (37-246)||(30966758-30966967)
chr2 (37-246)||(24818394-24818602)
chr2 (37-246)||(30966302-30966511)
chr2 (37-239)||(30963139-30963341)
chr2 (101-246)||(32377776-32377921)
chr2 (37-219)||(8256594-8256776)
chr2 (101-239)||(32377592-32377730)
chr2 (94-239)||(30961759-30961904)
chr2 (37-239)||(13191042-13191244)
chr2 (89-254)||(15639854-15640019)
chr2 (42-219)||(29259516-29259693)
chr2 (37-237)||(30963598-30963798)
chr2 (37-239)||(5399693-5399895)
chr2 (37-219)||(15619966-15620148)
chr2 (37-254)||(1912593-1912809)
chr2 (97-239)||(16379065-16379207)
chr2 (42-168)||(11388260-11388386)
chr2 (37-197)||(41754357-41754517)
chr2 (97-219)||(16379521-16379643)
chr2 (97-168)||(11394661-11394732)
chr2 (97-239)||(25433932-25434074)
chr2 (37-239)||(8073960-8074162)
chr2 (37-143)||(29804750-29804856)
chr2 (37-134)||(33174571-33174668)
chr2 (37-254)||(1707109-1707326)
chr2 (37-246)||(33175026-33175233)
chr2 (37-77)||(18098916-18098956)
chr2 (37-76)||(38898951-38898990)
chr2 (149-219)||(8181257-8181327)
chr2 (100-234)||(37552696-37552830)
chr2 (121-234)||(18875866-18875979)
chr2 (37-73)||(83085-83121)
chr2 (37-77)||(1953223-1953263)
chr2 (41-77)||(16379465-16379501)
chr2 (37-77)||(18447956-18447996)
chr2 (188-240)||(20502183-20502235)
chr2 (98-130)||(38898897-38898929)
[»] scaffold0499 (1 HSPs)
scaffold0499 (37-239)||(1927-2129)
[»] scaffold0020 (1 HSPs)
scaffold0020 (97-246)||(107332-107481)
[»] scaffold0243 (1 HSPs)
scaffold0243 (37-246)||(1288-1497)
[»] scaffold0018 (1 HSPs)
scaffold0018 (37-246)||(10368-10576)
[»] scaffold0277 (1 HSPs)
scaffold0277 (97-246)||(14571-14720)
[»] scaffold0168 (1 HSPs)
scaffold0168 (97-246)||(2870-3019)
[»] scaffold0022 (4 HSPs)
scaffold0022 (37-246)||(162546-162756)
scaffold0022 (97-247)||(163002-163152)
scaffold0022 (100-254)||(163202-163356)
scaffold0022 (97-246)||(69684-69833)
[»] scaffold0217 (1 HSPs)
scaffold0217 (97-239)||(438-580)
[»] scaffold0389 (1 HSPs)
scaffold0389 (97-246)||(13402-13551)
[»] scaffold0002 (2 HSPs)
scaffold0002 (97-246)||(154885-155034)
scaffold0002 (188-246)||(154521-154579)
[»] scaffold0040 (1 HSPs)
scaffold0040 (37-239)||(2086-2288)
[»] scaffold1519 (1 HSPs)
scaffold1519 (110-234)||(1582-1706)
[»] scaffold0047 (3 HSPs)
scaffold0047 (98-254)||(17459-17615)
scaffold0047 (97-254)||(17996-18153)
scaffold0047 (37-77)||(18172-18212)
[»] scaffold0333 (3 HSPs)
scaffold0333 (99-239)||(4691-4830)
scaffold0333 (98-254)||(5150-5305)
scaffold0333 (39-77)||(4631-4669)
[»] scaffold0071 (1 HSPs)
scaffold0071 (96-176)||(44660-44740)
[»] scaffold0088 (1 HSPs)
scaffold0088 (37-77)||(23741-23781)
[»] scaffold0007 (1 HSPs)
scaffold0007 (37-77)||(142312-142352)
[»] scaffold0065 (1 HSPs)
scaffold0065 (192-255)||(62967-63030)
[»] scaffold0557 (1 HSPs)
scaffold0557 (100-134)||(2236-2270)
[»] scaffold0391 (1 HSPs)
scaffold0391 (99-197)||(14871-14969)
[»] scaffold0664 (1 HSPs)
scaffold0664 (37-77)||(4020-4060)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 3899835 - 3900079
Alignment:
Q  4 agaaaaaattgttcaaaggtatctcaattttacataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||| ||||||    
T  3899835 agaaaaaattgttcaaaggtatctcaattttacataagaattgtttggtactacatataccaacaagatgcatctttttttcgacaacacaaatcataag 3899934  T
Q  104 aactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtga 203  Q
    ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| |  ||||||||||||||||    
T  3899935 aactccacaataaagcatgcttgacttggagcaattttggtatgggtgaccttctggaaagtttcccaaaaagcgtgtgagtatggacaaaacaaggtga 3900034  T
Q  204 aaagactcgtgttggtctatggggtcagtcggcaattctgaaaat 248  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||    
T  3900035 aaagactcgtgttgatctgtggggtcagtcagcaattctgaaaat 3900079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 31284354 - 31284152
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  31284354 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 31284255  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||| |||| ||||||| || ||||||||||||| |  |||||||||||||||||| | ||||||||||||||    
T  31284254 attttgggatgggtgacctgccgggaagttttccgacaagcgtgcgagtggggacaaaacacgccgaaaagactcgtgttggtttgtggggtcagtcggc 31284155  T
Q  237 aat 239  Q
    |||    
T  31284154 aat 31284152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 98 - 247
Target Start/End: Complemental strand, 27187347 - 27187197
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggac-aaaac 196  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||| | |||||||||||||| ||||||| || || |||| |||||    
T  27187347 cataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtgaggacaaaaac 27187248  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaa 247  Q
    | | ||||||||||||||||||| | |||||||||||||||||||||||||    
T  27187247 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaattctgaaaa 27187197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 28561814 - 28562011
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  28561814 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 28561913  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcgg 235  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||||    
T  28561914 attttgggatg-gtgacctacggggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgg 28562011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 37 - 239
Target Start/End: Original strand, 8067348 - 8067550
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||| ||||||| |||| ||||||||||||||       ||  | | ||  |||||||||||||| |||||||| ||||||||||||||||    
T  8067348 ataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccatagttaagcgtgcttgacttggagca 8067447  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||| ||||||| || || |||||||||| | ||||||||||||||||||| | || ||||| |||||    
T  8067448 attttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgaggtcaatcggc 8067547  T
Q  237 aat 239  Q
    |||    
T  8067548 aat 8067550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 50347874 - 50348023
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | | |||||||||||| ||| ||| || || |||||||||    
T  50347874 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttcccgataagtgtgcgagtgaggacaaaac 50347973  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  50347974 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 50348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 11180112 - 11179903
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||  | | ||   |||||||||||||||||||||| ||||||||||||||||    
T  11180112 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagca 11180013  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||| ||||||||  ||| |||||| || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  11180012 attttgggatgggtgacctaccgggatgtttcccggtaagtgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgac 11179913  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  11179912 aatgctgaaa 11179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 13150632 - 13150423
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  13150632 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 13150533  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||| ||| || || |||||||||| | ||||||||||||||||| | | |||||||||||| |    
T  13150532 attttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgac 13150433  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  13150432 aatgctgaaa 13150423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 16811509 - 16811656
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||| |||| || || || |||||||||    
T  16811509 ccataagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgcgagtgaggacaaaac 16811608  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
      | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  16811609 --gctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 16811656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 13150117 - 13149968
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||| ||  ||| |||  | || |||||||||    
T  13150117 ccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgcaagtgaggacaaaac 13150018  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  13150017 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 13149968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 14820222 - 14820431
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | |   ||||||||||||||||||||||| ||||||||||||| ||    
T  14820222 ataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtgcttgacttggaaca 14820321  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| |||||||   || ||||||||||  |||| ||  | || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  14820322 attttgggatgggtgacctatcggaaagtttcccggtaagcatgcaagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 14820421  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  14820422 aatcctgaaa 14820431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 32227238 - 32227090
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||  ||| ||| || || ||| ||||||    
T  32227238 cataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggaaaaaaca 32227139  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
       ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  32227138 cattgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 32227090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 32227629 - 32227777
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||| ||| ||| || || ||| ||||||    
T  32227629 cataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagtgtgcgagtgaggaaaaaaca 32227728  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
       ||||||||||||||||||| | | |||||||||| |||| ||||||    
T  32227729 cattgaaaagactcgtgttggtttgtagggtcagtcgacaatgctgaaa 32227777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 253
Target Start/End: Original strand, 7493949 - 7494165
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||| ||||||||||| |||| ||||||||||||||       ||  | |||||||||||||||||||||| |||||||||||||||||||||      
T  7493949 ataagaattttttggtactacttatatcaacaagatgcatcttcttttcggtagcccaaaccataagaactccacatttaagcatgcttgacttggagtt 7494048  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | || | |||  ||||||||| |||| ||||||| |||||||| || || | ||||| || | ||||||||||| ||||||| | |||||||||||| |    
T  7494049 gtcttagcatggctgaccttctaggaaatttcccgtaaagcgtgcgagtgagaacaaagcacgttgaaaagactcatgttggtatgtggggtcagtcgac 7494148  T
Q  237 aattctgaaaatcgtct 253  Q
    |||||| ||| ||||||    
T  7494149 aattcttaaagtcgtct 7494165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 39653292 - 39653434
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||| ||| ||||||| | |||||||||||||  ||| ||| || || |||||||||    
T  39653292 ccatgagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaac 39653391  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | ||||||||||||||||||| | |||||||||||| ||||    
T  39653392 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 39653434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 3890013 - 3890086
Alignment:
Q  4 agaaaaaattgttcaaaggtatctcaattttacataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  3890013 agaaaaaattgttcaaaggtatctcaattttacataagaattgtttgctactacatatatcaacaagatgcatc 3890086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 14814077 - 14814226
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| | |  | ||||||||  ||||||| || ||  ||||||||    
T  14814077 ccataagaactccacagttaagcgtgcttgacttggagcaattttgtgatgggtgacctaccgaaaggtttcccggtaagcgtgcgagtgaagacaaaac 14814176  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||| |||||||||| ||||||    
T  14814177 acgctgaaaagactcgtgttggtttgtggggttagtcggcaatactgaaa 14814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 253
Target Start/End: Original strand, 7477259 - 7477475
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||| ||||||||||| |||| ||||||||| ||||       ||  | |||||||||||||||||||||| ||||||||||||||||| ||| |    
T  7477259 ataagaattttttggtactacttatatcaacaagatacatcttcttttcggtagcccaaaccataagaactccacatttaagcatgcttgacttagagta 7477358  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | || | |||  ||||||| |||||| |||| || |||||||| || || | ||||| || | ||||||||||| ||||||| | |||||||||||| |    
T  7477359 gtcttaggatggctgaccttatgggaaatttctcggaaagcgtgcgagtgagaacaaagcacgttgaaaagactcatgttggtatgtggggtcagtcgac 7477458  T
Q  237 aattctgaaaatcgtct 253  Q
    |||||| ||| ||||||    
T  7477459 aattcttaaagtcgtct 7477475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 29224392 - 29224520
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| ||||| |||||||||||||       ||  | ||||||||||||||||| |||| |||||| ||||||||||||||||    
T  29224392 ataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaacttcacaattaagcgtgcttgacttggagca 29224491  T
Q  137 attttggtatgagtgaccttctgggaagt 165  Q
    ||||||| ||| ||||||||||| |||||    
T  29224492 attttgggatgggtgaccttctgagaagt 29224520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 32386752 - 32386610
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||  | || |||||||  |  ||||||  || || |||||||||    
T  32386752 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacccaccggaaagtttcttggtaagcgtccgagtgaggacaaaac 32386653  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | | ||||||||||||||||| | |||||||||||||||||    
T  32386652 acgctaaaaagactcgtgttggtttgtggggtcagtcggcaat 32386610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 53150829 - 53150694
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||| ||||||||| | ||||| ||||||||||||||||| ||| |||||||| || |||||||||| ||||||| | || || ||||||||||    
T  53150829 cataagaacttcacagttaaccgtgcttaacttggagcaattttgggatgggtgaccttatgagaagtttcccaaaaagcgggcgagtgaggacaaaaca 53150730  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtc 233  Q
     | ||||||||||| |||| || | |||||||||||    
T  53150729 tgttgaaaagactcatgttagtttgtggggtcagtc 53150694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 16811053 - 16811202
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| |||| |||||  ||||||||||| ||||||||||| ||| ||||||| | ||||||||||||   ||||||| || || ||||||||     
T  16811053 ccataagaacttcacatttaagtgtgcttgacttgtagcaattttgggatgggtgacctaccgggaagtttccccgtaagcgtgcgagtgaggacaaaat 16811152  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | |||||||| |||||||||| | ||||||| ||||||||| ||||||    
T  16811153 acgctgaaaagattcgtgttggtttgtggggtcggtcggcaatcctgaaa 16811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 37045163 - 37045317
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| ||||||| | ||||   ||||||| |||| || || || |||||||||    
T  37045163 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaccggga---ttcccgataagcatgcgagtgaggacaaaac 37045259  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    | | ||||||||||||||||||| | | |||||||||| |||| || ||| |||||||    
T  37045260 acgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctg 37045317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 233
Target Start/End: Complemental strand, 25802626 - 25802430
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||| |||||||||||| |||| ||||||||||||||       ||| | ||||  ||||||||| ||||||||||||| || ||||||||||| |    
T  25802626 ataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgtttgacttggagta 25802527  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtc 233  Q
     | || | | | |||||||||| ||||||||| ||||||| ||| || |  || ||||||| | |||||||||  |||||||| | | |||||||||    
T  25802526 gtcttaggacgggtgaccttctaggaagtttctcgaaaagagtgcgagtaaggtcaaaacacgctgaaaagacgtgtgttggtttgtagggtcagtc 25802430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 20885135 - 20884993
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||||| |||||| |||||||||||||| | | || | ||| ||||||| | ||||| |||||||  |||||||  | |  |||||||||    
T  20885135 ccataagaactccacaattaagcgtgcttgacttggagtagtatttggatgggtgacctaccgggaaatttcccgttaagcgtgcaagttaggacaaaac 20885036  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | ||||||||||||||||||| | | ||||||||| |||||    
T  20885035 acgctgaaaagactcgtgttggtttgtagggtcagtctgcaat 20884993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 15377411 - 15377491
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaag 176  Q
    ||||| ||||||||||||||||   ||||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||    
T  15377411 accattagaactccacagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaag 15377491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 254
Target Start/End: Complemental strand, 4067377 - 4067221
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| |||||||||||||| | | || | |||  |||||| | || |||||| | |  |||||||  | || ||||||||||    
T  4067377 cataagaactccacagttaagcgtgcttgacttggagtagtctttggatggatgacctaccggaaagttttctggtaagcgtgcaagtgaggacaaaaca 4067278  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
     | |||||||||  |||||||| | | ||||||||||||||| || ||| |||||||    
T  4067277 cgctgaaaagaccagtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctg 4067221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 15388270 - 15388350
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaag 176  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||    
T  15388270 accatcagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaag 15388350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 15392637 - 15392717
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaag 176  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||    
T  15392637 accatcagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaag 15392717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 15405673 - 15405753
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaag 176  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||    
T  15405673 accattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaag 15405753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 15417498 - 15417578
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaag 176  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||    
T  15417498 accattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaag 15417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 15411082 - 15411205
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaa 195  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||||||| ||| |||||||| |||||||||| || ||||| |||  | || |||||||     
T  15411082 accattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttttgggaagttttcctaaaagtgtgcaagtgaggacaaag 15411181  T
Q  196 caaggtgaaaagactcgtgttggt 219  Q
    || |||||||  || |||||||||    
T  15411182 cacggtgaaagaacccgtgttggt 15411205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 233
Target Start/End: Complemental strand, 25230783 - 25230587
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| |||||||||||||         |  | ||||  |||||||||||| ||| |||||| |||||||||||||| |    
T  25230783 ataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtgcttgacttggagta 25230684  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtc 233  Q
     | ||   ||| ||| ||| |||||||||||||||  ||||||| || || |  ||||||| | || |||||||||||||||| | | |||||||||    
T  25230683 gtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaaaacacgctggaaagactcgtgttggtttgtagggtcagtc 25230587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 233
Target Start/End: Complemental strand, 25238370 - 25238174
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| |||||||||||||         |  | ||||  |||||||||||| ||| |||||| |||||||||||||| |    
T  25238370 ataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtgcttgacttggagta 25238271  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtc 233  Q
     | ||   ||| ||| ||| |||||||||||||||  ||||||| || || |  ||||||| | || |||||||||||||||| | | |||||||||    
T  25238270 gtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaaaacacgctggaaagactcgtgttggtttgtagggtcagtc 25238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 41472368 - 41472500
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||||||||||||||||| ||||||||||||||       ||  |   ||  ||||||||||||||| ||||| | ||||||||||| | ||    
T  41472368 ataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataagaactccacggttaaacgtgcttgacttgaaaca 41472467  T
Q  137 attttggtatgagtgaccttctgggaagtttcc 169  Q
    ||||||| ||| ||||||| | || ||||||||    
T  41472468 attttgggatgggtgacctaccggaaagtttcc 41472500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 2911223 - 2911284
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttct 158  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||||||||||||||    
T  2911223 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgagtgaccttct 2911284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 15410628 - 15410698
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtt 166  Q
    ||||||||||||||||| |||||  ||||||||||||| ||||||||  ||| |  |||||||||||||||    
T  15410628 accataagaactccacatttaagtgtgcttgacttggatcaattttgagatgggaaaccttctgggaagtt 15410698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 25238702 - 25238580
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||  |||||||   |||||||||   |  |||| || || || |||||||||    
T  25238702 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggattggtgacctatcgggaagttttttggtaagcatgcgagtgaggacaaaac 25238603  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | |||||||||||||||||||    
T  25238602 acgctgaaaagactcgtgttggt 25238580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 25239068 - 25239003
Alignment:
Q  174 aagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||||||||| || |||||||||| | ||||||||||||||||||| | | |||||||||| ||||    
T  25239068 aagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaat 25239003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 219
Target Start/End: Original strand, 30529755 - 30529936
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||| ||||||||||| |||| ||||||||||||||        |  | ||||  ||||||||||| || |||||||| |||||||||||||| |    
T  30529755 ataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaacttcatagttaagcgtgcttgacttggagta 30529854  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
     | || | ||| ||||||| || |||||||||||   |||| || || || |||||||||| | | |||||||| ||||||||    
T  30529855 gtctttggatgggtgacctact-ggaagtttcccagtaagcatgcgagtgaggacaaaacacgctaaaaagacttgtgttggt 30529936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 15376123 - 15376203
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaag 176  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||||||| ||| |||| ||| |||||||||| || |||||    
T  15376123 accattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaacttttgggaagttttcctaaaag 15376203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 25248179 - 25248219
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  25248179 ataagaattgtttggtactacctatatcaacaagatgcatc 25248219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 32797013 - 32796973
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  32797013 ataagaattgtttggtactacctatatcaacaagatgcatc 32796973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 15396492 - 15396559
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaa 163  Q
    ||||||||||||||||| |||||  ||||||||||||| ||||||||  ||| |  ||||||||||||    
T  15396492 accataagaactccacatttaagtgtgcttgacttggatcaattttgagatgggaaaccttctgggaa 15396559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 39641065 - 39641104
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  39641065 ccataagaactccacagttaagcgtgtttgacttggagca 39641104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 15381257 - 15381303
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttg 142  Q
    ||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  15381257 accataagaactccacatttaagtgtgcttgacttggatcaattttg 15381303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 41474127 - 41474181
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgac 153  Q
    |||| ||||||||||| |||| ||||||||||||| ||||||||| ||| |||||    
T  41474127 ataaaaactccacagtcaagcgtgcttgacttggaacaattttgggatgggtgac 41474181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 41473746 - 41473811
Alignment:
Q  174 aagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    ||||||| || || |||||||||| | ||||||||| ||||||||| | |||||||||||| ||||    
T  41473746 aagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgccaat 41473811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 4067438 - 4067398
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||| |||||||||||||||| |||| ||||||||||||||    
T  4067438 ataaaaattgtttggtactacctatatcaacaagatgcatc 4067398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 20885195 - 20885155
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||| |||||| |||| ||||||||||||||    
T  20885195 ataagaattgtttgatactacctatatcaacaagatgcatc 20885155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 25239155 - 25239115
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  25239155 ataagaattttttggtactacctatatcaacaagatgcatc 25239115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 26310067 - 26310027
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||| |||| ||||||||||||||| ||||||||||    
T  26310067 ataagaattttttgttactacatataccaaaaagatgcatc 26310027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 32386812 - 32386772
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| ||||  |||||||||||||    
T  32386812 ataagaattgtttggtactacctatattaacaagatgcatc 32386772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 50347814 - 50347854
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  50347814 ataagaattgttgggtactacctatatcaacaagatgcatc 50347854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 6976 - 7226
Alignment:
Q  4 agaaaaaattgttcaaaggtatctcaattttacataagaattgtttggtactacatat-accaacaagatgcatcnnnnnnncgacaacccaaaccataa 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        ||||| |||||||||||    
T  6976 agaaaaaattgttcaaatgtatctcaattttacataagaattgtttggtactacatattaccaacaagatgcaccttttttttgacaatccaaaccataa 7075  T
Q  103 gaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  7076 gaactccacagttaagcatgcttgacttggagcaattttggtatgggtgaccttttggaaagtttcccgaaaagcatgtgagtggggac-aaacaaggtg 7174  T
Q  203 aaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    |||||||||||||||| || |||||||| ||| |||||||||||||||||||    
T  7175 aaaagactcgtgttggcctgtggggtcaatcgacaattctgaaaatcgtctg 7226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20054614 - 20054405
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  20054614 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 20054515  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20054514 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20054415  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20054414 aatcctgaaa 20054405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20055070 - 20054861
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  20055070 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 20054971  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20054970 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20054871  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20054870 aatcctgaaa 20054861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20055526 - 20055317
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  20055526 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 20055427  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20055426 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20055327  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20055326 aatcctgaaa 20055317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20055982 - 20055773
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  20055982 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 20055883  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20055882 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20055783  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20055782 aatcctgaaa 20055773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20056438 - 20056229
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  20056438 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 20056339  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20056338 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20056239  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20056238 aatcctgaaa 20056229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20057341 - 20057132
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  20057341 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 20057242  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20057241 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20057142  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20057141 aatcctgaaa 20057132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20057797 - 20057588
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  20057797 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 20057698  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20057697 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20057598  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20057597 aatcctgaaa 20057588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 38340974 - 38341183
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||| ||||||||||| ||||||||||||||||    
T  38340974 ataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagca 38341073  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| |||||||||||||||  ||||||| || || |||||||||| |  |||||||||||||||||| ||||||||||||||||    
T  38341074 attttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgcggaaaagactcgtgttggtttatggggtcagtcggc 38341173  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  38341174 aatcctgaaa 38341183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 246
Target Start/End: Complemental strand, 20056891 - 20056685
Alignment:
Q  40 agaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaatt 139  Q
    |||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| || ||||||||||||||||    
T  20056891 agaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttggagcaatt 20056792  T
Q  140 ttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||||||||    
T  20056791 ttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20056692  T
Q  240 tctgaaa 246  Q
     ||||||    
T  20056691 cctgaaa 20056685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 20845739 - 20845537
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||||| |||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| |||||||||||||| |    
T  20845739 ataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagaa 20845640  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20845639 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20845540  T
Q  237 aat 239  Q
    |||    
T  20845539 aat 20845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20054158 - 20053949
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||| ||||||    
T  20054158 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactaggagca 20054059  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||| | |  ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  20054058 attttgggatgggtgacctaccgggaagttttctggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcgac 20053959  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20053958 aatcctgaaa 20053949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20060418 - 20060209
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||  ||||||||||||| ||    
T  20060418 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgcttgacttggatca 20060319  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||| |||  ||||||| || || |||||||||| | || |||||||||||||||| | ||||||||||||||    
T  20060318 attttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaaaacacgatggaaagactcgtgttggtttgtggggtcagtcggc 20060219  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20060218 aatcctgaaa 20060209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 52250274 - 52250483
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||| ||||    
T  52250274 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagca 52250373  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||| ||| || || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  52250374 attttggaatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgac 52250473  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  52250474 aatgctgaaa 52250483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 16451951 - 16451802
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | || |||||| || | ||||||| |  ||  ||||||||    
T  16451951 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaaaac 16451852  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  16451851 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 16451802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 16461104 - 16460955
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | || |||||| || | ||||||| |  ||  ||||||||    
T  16461104 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaaaac 16461005  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  16461004 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 16460955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 50003089 - 50002944
Alignment:
Q  101 aagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaagg 200  Q
    ||||||| ||||||||||| ||||||||||||||||||||| | ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| |     
T  50003089 aagaacttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgc 50002990  T
Q  201 tgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  50002989 tgaaaagactcgtgttggtttgtggggtcagtcagcaatcctgaaa 50002944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 52250671 - 52250820
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||| | |||||||||||||  ||| ||| || ||  ||||||||    
T  52250671 ccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaagacaaaac 52250770  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  52250771 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 52250820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 52251008 - 52251157
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||| | |||||||||||||  ||| ||| || ||  ||||||||    
T  52251008 ccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaagacaaaac 52251107  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  52251108 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 52251157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 253
Target Start/End: Complemental strand, 50002785 - 50002569
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |  ||||||||||| |||||||| || |||||||||||||    
T  50002785 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccatagttaagcgtgtttgacttggagca 50002686  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| |||  |||||| | |||||||| ||||  ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  50002685 attttgggatggatgacctaccgggaagttccccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgac 50002586  T
Q  237 aattctgaaaatcgtct 253  Q
    ||| |||||| ||||||    
T  50002585 aatcctgaaagtcgtct 50002569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 46693813 - 46693604
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||| |||||||||||||||| |||| ||||||||||||||       ||  | | ||   ||||| |||||||||||||||| ||||||||||||||||    
T  46693813 ataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaagcgtgcttgacttggagca 46693714  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | || ||||||||||  | ||||| || || |||||||||| | ||||||||| ||||||||| | |||||||||||| |    
T  46693713 attttgggatgggtgacctaccggaaagtttcccggtatgcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgac 46693614  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  46693613 aatcctgaaa 46693604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 35759686 - 35759484
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||| || |||||| | |||||||||||||||     
T  35759686 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaaacgtgcttgacttggagct 35759587  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||  ||||||| | |||||||||  ||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  35759586 attttgggattggtgacctaccgggaagtttttcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttttggggtcagtcggc 35759487  T
Q  237 aat 239  Q
    |||    
T  35759486 aat 35759484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 51372892 - 51372750
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||    ||||||||  ||  ||||||| || || ||||||||     
T  51372892 ccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctatcaggaagtttttcggtaagcgtgcgagtgaggacaaaat 51372793  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
      | ||||||||||||||||||| | |||||||| ||||||||    
T  51372792 ccgctgaaaagactcgtgttggtttgtggggtcaatcggcaat 51372750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 240
Target Start/End: Complemental strand, 43057141 - 43056940
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaat 138  Q
    |||||||||||| |||||| |||| ||||||||||||||       ||  | ||||  ||||||||||||||||||||||| || ||||||| |||   |    
T  43057141 aagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgattgacttagagtggt 43057042  T
Q  139 tttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaa 238  Q
     || | ||| ||||||| |||||||||||||||  |||| || || || ||||||||||   |||||| ||| |||||||| | | ||||||||||||||    
T  43057041 ctttggatgggtgacctactgggaagtttcccggtaagcatgcgagtgaggacaaaacacactgaaaaaacttgtgttggtttgtagggtcagtcggcaa 43056942  T
Q  239 tt 240  Q
    ||    
T  43056941 tt 43056940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 219
Target Start/End: Complemental strand, 43057601 - 43057419
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| ||||  |||||||||||||       ||  | ||||  ||||||||||||||||||||||| || |||||||||||      
T  43057601 ataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgattgacttggagtg 43057502  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
     | || | ||  ||||||| |||||||||||||||  |||| ||||| || | |||||||| | | |||||||| ||||||||    
T  43057501 gtctttggatcggtgacctactgggaagtttcccggtaagcatgtgagtgagaacaaaacacgctaaaaagacttgtgttggt 43057419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 23180798 - 23180928
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||| |||||||||| |||| |||||||||| |||       ||  | ||||  ||||||||| |||||| |||||| |||||||||||||| |    
T  23180798 ataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattccacaattaagcgtgcttgacttggagaa 23180897  T
Q  137 attttggtatgagtgaccttctgggaagttt 167  Q
    ||||||| ||| || ||||||||| ||||||    
T  23180898 attttgggatgggttaccttctggaaagttt 23180928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 35760992 - 35760849
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  | | ||  |||| ||||||||  |||||||| ||||||||||||||||    
T  35760992 ataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgagaactccgtagttaagcgtgcttgacttggagca 35760893  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtg 180  Q
    ||||||| ||| || ||||   |||||||||||||  |||||||    
T  35760892 attttgggatgggtaacctatcgggaagtttcccggtaagcgtg 35760849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 2634991 - 2635032
Alignment:
Q  36 cataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  2634991 cataagaattgtttggtactacctataccaacaagatgcatc 2635032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 7229960 - 7229819
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||||||||||| || |||||||| |||||||||||||||||| | ||  |||||||| |   ||||||  |||||||||||  | || ||| ||||||    
T  7229960 cataagaactccatagataagcatgtttgacttggagcaattttaggattggtgaccttatataaagtttttcgaaaagcgtgaaagtgaggataaaaca 7229861  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
     | |||||| |||||||||| | | |||||| ||||| ||||    
T  7229860 tgctgaaaaaactcgtgttgctttgtggggtgagtcgtcaat 7229819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 12728120 - 12728157
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12728120 ccataagaactccacagttaagcatgcttgacttggag 12728157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 50002363 - 50002257
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| | || ||||||||||||||       ||  | | ||  ||||||||||||||||||| ||  ||||||||||||||||    
T  50002363 ataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttgagtgtgcttgacttggagca 50002264  T
Q  137 attttgg 143  Q
    |||||||    
T  50002263 attttgg 50002257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 16907366 - 16907442
Alignment:
Q  101 aagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagc 177  Q
    |||||||||| |||||||| || |||||||||||||||||||  ||| |||||||| || ||||||||  |||||||    
T  16907366 aagaactccatagttaagcgtgtttgacttggagcaattttgagatgggtgaccttttgagaagtttcttgaaaagc 16907442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 219
Target Start/End: Complemental strand, 46411151 - 46411034
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||| || ||||||||||| |||| |||||    |||||| |||||||||||||| | ||||||  | |||| |||||||    ||||||||||    
T  46411151 cataagaacttcatagttaagcatgattgatttggatatgttttgggatgagtgaccttctagaaagtttttcaaaaaacgtgtga----ggacaaaaca 46411056  T
Q  198 aggtgaaaagactcgtgttggt 219  Q
    |  |||||||||||||||||||    
T  46411055 aattgaaaagactcgtgttggt 46411034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 8278093 - 8278144
Alignment:
Q  105 actccacagttaagcatgcttgacttggagcaattttggtatgagtgacctt 156  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||    
T  8278093 actccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctt 8278144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 35759991 - 35759940
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||||||||| | ||||||||||||||||||| | |||||||||||||||||    
T  35759991 ggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 35759940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 31823085 - 31822995
Alignment:
Q  149 gtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    ||||||| |||||||||||| ||  |||| || || || |||||||||| | ||||||||||||||||| | | ||||||||||| |||||    
T  31823085 gtgacctactgggaagtttctcggtaagcatgcgagtgaggacaaaacatgctgaaaagactcgtgttgatttgtggggtcagtcagcaat 31822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 31822741 - 31822635
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||| |||||||||||||||| |||||| |||||||       ||  | | ||| ||| ||||||||||||||||||| |  |||||||||| ||    
T  31822741 ataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaagaactccacagttaagcgtttttgacttggaaca 31822642  T
Q  137 attttgg 143  Q
    |||||||    
T  31822641 attttgg 31822635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 20061269 - 20061229
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  20061269 ataagaattgtttggtactacctatatcaacaagatgcatc 20061229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 12883592 - 12883631
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcat 76  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  12883592 ataagaattgtttggtactacctatatcaacaagatgcat 12883631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 35010014 - 35009977
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  35010014 ccataagaactccacggttaagcgtgcttgacttggag 35009977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 2328383 - 2328423
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| ||||  |||||||||||||    
T  2328383 ataagaattgtttggtactacctatattaacaagatgcatc 2328423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 16452011 - 16451971
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  16452011 ataagaattgttgggtactacctatatcaacaagatgcatc 16451971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 16461164 - 16461124
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  16461164 ataagaattgttgggtactacctatatcaacaagatgcatc 16461124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 16907302 - 16907342
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||| ||||    
T  16907302 ataagaattgtttggtactacctatatcaacaagatacatc 16907342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 30872966 - 30872934
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttg 131  Q
    |||||||||||||| ||||||||||||||||||    
T  30872966 ataagaactccacaattaagcatgcttgacttg 30872934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 246
Target Start/End: Original strand, 34371682 - 34371889
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaat 138  Q
    ||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |||||||||| |||||||||||| ||||||||||||||||||    
T  34371682 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccacagttaagcgtgcttgacttggagcaat 34371781  T
Q  139 tttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaa 238  Q
    ||||| ||| ||||||| |||||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||||    
T  34371782 tttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaa 34371881  T
Q  239 ttctgaaa 246  Q
    | ||||||    
T  34371882 tcctgaaa 34371889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 17445533 - 17445331
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||| ||||||||||||| ||||||||||||||||    
T  17445533 ataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatccacagttaagcgtgcttgacttggagca 17445434  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  17445433 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgac 17445334  T
Q  237 aat 239  Q
    |||    
T  17445333 aat 17445331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 189136 - 189345
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| |||||||||| |||       ||  | | ||  ||||||||||||||||||||||||||||||||||||||||    
T  189136 ataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaactccacagttaagcatgcttgacttggagca 189235  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | || ||||||||||  || |||| || || |||||||||| | ||||||||||||||||||| | |||| |||||| ||    
T  189236 attttgggatgggtgacctaccggaaagtttcccggtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgggatcagtccgc 189335  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  189336 aatcctgaaa 189345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 3887131 - 3886926
Alignment:
Q  41 gaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaattt 140  Q
    ||||| ||||||||||| |||| ||||||||||||||       ||  ||| ||  ||||||||||| ||||||||||| ||||||||||||||||||||    
T  3887131 gaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataagaacttcacagttaagcgtgcttgacttggagcaattt 3887032  T
Q  141 tggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaatt 240  Q
    | | ||| ||||||| ||||||||||||||   ||||||| || || |||||||||| | ||| ||||||||||||||| | |||||||||||||||||     
T  3887031 ttggatgggtgacctactgggaagtttcccagtaagcgtgcgagtgaggacaaaacacgctgacaagactcgtgttggtttgtggggtcagtcggcaatc 3886932  T
Q  241 ctgaaa 246  Q
    ||||||    
T  3886931 ctgaaa 3886926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 246
Target Start/End: Original strand, 34372138 - 34372345
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaat 138  Q
    ||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||| ||||||||||| ||||||||||||||||||    
T  34372138 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaat 34372237  T
Q  139 tttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaa 238  Q
    ||||| ||  ||||||| | ||||||||| |||| ||||||| || || ||| |||||| | |||||| |||||||||||| ||||| ||||||||||||    
T  34372238 tttgggattggtgacctaccgggaagttttccgataagcgtgcgagtgaggaaaaaacacgctgaaaatactcgtgttggtttatggcgtcagtcggcaa 34372337  T
Q  239 ttctgaaa 246  Q
    | ||||||    
T  34372338 tcctgaaa 34372345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 3886675 - 3886470
Alignment:
Q  41 gaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaattt 140  Q
    ||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| || ||||| |||||||||||    
T  3886675 gaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacgtggagcaattt 3886576  T
Q  141 tggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaatt 240  Q
    | | ||| ||||||| | ||||||||||||   ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||||||||     
T  3886575 ttggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatc 3886476  T
Q  241 ctgaaa 246  Q
    ||||||    
T  3886475 ctgaaa 3886470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 8642112 - 8641904
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||| ||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  8642112 ataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 8642013  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    |||||   ||| ||||||| | |||||||||| ||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  8642012 attttaagatgggtgacctac-gggaagtttctcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 8641914  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  8641913 aatcctgaaa 8641904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 239
Target Start/End: Original strand, 2474475 - 2474675
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaat 138  Q
    ||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||||    
T  2474475 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaat 2474574  T
Q  139 tttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaa 238  Q
    ||||  ||| ||||||| | || ||||||||||  |||| || || || ||| |||||| | ||||||||||||||||||| | ||||||||||||||||    
T  2474575 tttgagatgggtgacctaccggaaagtttcccggtaagcatgcgagtgaggaaaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaa 2474674  T
Q  239 t 239  Q
    |    
T  2474675 t 2474675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 219
Target Start/End: Original strand, 1821974 - 1822156
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  | ||||  |||||||||||||||| |||||| |||||||||||||| |    
T  1821974 ataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacatttaagcgtgcttgacttggagta 1822073  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
     | || | ||| ||||||| | |||||||||||||  ||||||||||||| |||||||||| | |||||||||||||||||||    
T  1822074 gtctttggatgggtgacctaccgggaagtttcccggtaagcgtgtgaatgaggacaaaacacgctgaaaagactcgtgttggt 1822156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 15513030 - 15512881
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||||| |||| | ||||||||||| ||||||||||| |||  |||||| | |||||||||||||  ||||||| || || ||||||||     
T  15513030 ccataagaactccacaattaaacgtgcttgacttgaagcaattttgggatggatgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaat 15512931  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  15512930 acgttgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 15512881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 98 - 254
Target Start/End: Complemental strand, 29680124 - 29679968
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| || ||||||||||| | | || | ||| ||||||||| | |||||||||||| |||||||  |||| ||||||||||    
T  29680124 cataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgaccttccgagaagtttcccgataagcgtgcaaatgaggacaaaaca 29680025  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
     | ||||||||||||||||||| | | ||||||||||||||| || ||| |||||||    
T  29680024 cgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctg 29679968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 42788724 - 42788515
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||| ||||||||||||||||||| ||||||||||||||||    
T  42788724 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactccacagttaagcgtgcttgacttggagca 42788625  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||  ||||||| | |||||||||| ||  |||| || || || |||||||||| | ||||||||| ||||||||| | ||| |||||||| |    
T  42788624 attttgggataggtgacctaccgggaagtttctcggtaagcttgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggagtcagtcgac 42788525  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  42788524 aatcctgaaa 42788515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 234
Target Start/End: Complemental strand, 8391340 - 8391203
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||| ||| || |||| || || |||||||||    
T  8391340 ccataagaactccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctcgataaacgtgcgagtgaggacaaaac 8391241  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcg 234  Q
    | | ||| ||||||||||||| | | ||||||||||||    
T  8391240 acgctgagaagactcgtgttgatttgtggggtcagtcg 8391203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 195
Target Start/End: Complemental strand, 21886224 - 21886066
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||||||||||||||||| ||||||||||||||       ||  | | ||  |||||||||||||| |||||||  ||||||||||||||||    
T  21886224 ataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaaagttaagtgtgcttgacttggagca 21886125  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaa 195  Q
    ||||||| ||| ||||||| |||||||||||||||  ||||||| || || ||||||||    
T  21886124 attttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaaaa 21886066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 22557100 - 22557255
Alignment:
Q  100 taagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaag 199  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| |    
T  22557100 taagaacttcacagttaagcgtgcctgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacg 22557199  T
Q  200 gtg-aaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
     || ||||||||||||||||| | | |||||||||| |||| |||||  |||||||    
T  22557200 ctgtaaaagactcgtgttggtttgtagggtcagtcgacaatcctgaatgtcgtctg 22557255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 24182323 - 24182115
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||| ||||||||||  |||||||||||||||||||       ||  | |||||||||||| ||||  |||||||||| || |||||||||||||    
T  24182323 ataagaattatttggtactatctataccaacaagatgcatcttcttt-cggtaccccaaaccataataacttaacagttaagcgtggttgacttggagca 24182225  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||||||   ||||||| || |||| ||| || || ||| |||||| | |||||||| |||||||||| | |||||| ||||| |    
T  24182224 attttgggatgggtgaccttctaaaaagtttctcggaaagtgtgcgagtgaggataaaacacgttgaaaagattcgtgttggtttgtggggttagtcgac 24182125  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  24182124 aatcctgaaa 24182115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 239
Target Start/End: Original strand, 2474027 - 2474219
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||| | |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  2474027 ataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 2474126  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||          | |||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  2474127 attttgggatgggtgacc----------tatcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 2474216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 219
Target Start/End: Complemental strand, 10927481 - 10927299
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  | ||||  ||||||||||||||||||||| | |||||||||||||| |    
T  10927481 ataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaaacgtgcttgacttggagta 10927382  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
     | || | ||| ||||||  | |||||||||  ||  ||||||||||||| |||||||||| | |||||||||||||||||||    
T  10927381 gtctttggatgggtgaccgaccgggaagtttttcggtaagcgtgtgaatgaggacaaaacacgctgaaaagactcgtgttggt 10927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 30684578 - 30684491
Alignment:
Q  93 caaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtg 180  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||| |||||||||||  ||||||| |||||||||||    
T  30684578 caaaccataagaactccacagttaagcgtgctcaacttggagcaattttgggatgggtgaccttctgaaaagtttctcgaaaagcgtg 30684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 20858559 - 20858411
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||| |||||||  ||||||||||||||||| ||||| ||| ||||||||||||||||||| | ||||||| ||  | || |||||||||    
T  20858559 ccataagaactccatagttaaggttgcttgacttggagcaactttgggatg-gtgaccttctgggaagttttctgaaaagcatgctagtgaggacaaaac 20858461  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | |||||| |||||||||| | | |  ||||||||| |||| ||||||    
T  20858460 acgctgaaaatactcgtgttgatttgttaggtcagtcgacaatcctgaaa 20858411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 4102918 - 4102994
Alignment:
Q  91 cccaaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagttt 167  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||||||  ||||||||||||||| |||||||    
T  4102918 cccaaaccataagaacttcacagttaaacgtgcttgacttggagcaattttgagatgagtgaccttctgagaagttt 4102994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 2193884 - 2194002
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  2193884 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 2193983  T
Q  137 attttggtatgagtgacct 155  Q
    ||||||| ||| |||||||    
T  2193984 attttgggatgggtgacct 2194002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 219
Target Start/End: Complemental strand, 27646913 - 27646731
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  | ||||   |||||||||||||||||||||| |||||| ||||||| |    
T  27646913 ataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactccacagttaagcgtgcttgtcttggagta 27646814  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
     | || | ||| ||||||| | |||||||||||| | || |||| || || |||||||||| | ||||||||||| |||||||    
T  27646813 gtctttgcatgggtgacctaccgggaagtttcccaataaacgtgcgagtgaggacaaaacatgctgaaaagactcatgttggt 27646731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 30685032 - 30684887
Alignment:
Q  94 aaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaa 193  Q
    |||| |||||||||| || ||||||  ||||||||||||| ||||||||  |||  |||| |||| | |||||| ||||||||||||  |  | ||||||    
T  30685032 aaacaataagaactctacggttaagtgtgcttgacttggaacaattttgagatggatgactttcttgaaagttttccgaaaagcgtgcaagcgaggacaa 30684933  T
Q  194 aacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||| | ||||||||||||||||||| | |||||||| ||||||||    
T  30684932 aacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaat 30684887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 22556667 - 22556807
Alignment:
Q  100 taagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaag 199  Q
    |||||||| ||||||||||| ||  ||||||||||||||||||| ||| ||||||| |  ||||||||| ||  ||||||| || || |||||||||| |    
T  22556667 taagaacttcacagttaagcgtggctgacttggagcaattttgggatgggtgacctaccaggaagtttctcggtaagcgtgcgagtgaggacaaaacacg 22556766  T
Q  200 gtg-aaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
     || ||||||||||||||||| | | |||||||||| ||||    
T  22556767 ctgtaaaagactcgtgttggtttgtagggtcagtcgacaat 22556807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 18304559 - 18304693
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||  ||| |||||||| || |||||||| |  |||  ||| || || |||||||||    
T  18304559 ccataagaattccacagttaagcatgtttgacttggagcaattttgtgatgggtgaccttttgagaagtttcacagaaattgtgcgagtgaggacaaaac 18304658  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcag 231  Q
    | | |||| | |||||||||| | | |||||||||    
T  18304659 acgctgaacaaactcgtgttgatttctggggtcag 18304693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 30720281 - 30720156
Alignment:
Q  94 aaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaa 193  Q
    |||| |||||||||| |||||||| | ||||||||||||| ||||||||| |||  |||| |||| | ||| || |||||||||||| ||  | ||||||    
T  30720281 aaacaataagaactctacagttaatcgtgcttgacttggaacaattttgggatggatgactttcttgaaagctttccgaaaagcgtgcgagcgaggacaa 30720182  T
Q  194 aacaaggtgaaaagactcgtgttggt 219  Q
    |||| | ||||||||||| |||||||    
T  30720181 aacacgctgaaaagactcctgttggt 30720156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 2058653 - 2058557
Alignment:
Q  120 atgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgtt 216  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||| ||||||| || | |||||| |   |||||| |||||||||    
T  2058653 atgcttgacttggagcaattttgggatgagtgaccttctaagaagtctcccgaaaaacgtgtgagtgagtacaaaatacattgaaaaaactcgtgtt 2058557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 18750214 - 18750078
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||| | |||| | | ||||||||||||||||||| | ||| |||||||||| ||||||||     |||| ||| || || |||||||||    
T  18750214 ccataagaactccataattaatcgtacttgacttggagcaattttaggatgggtgaccttctaggaagttttttagaaagtgtgcgagtgaggacaaaac 18750115  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtc 233  Q
    |   |||||||||||| |||||| | |||||||||||    
T  18750114 acactgaaaagactcgagttggtttgtggggtcagtc 18750078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 16370724 - 16370629
Alignment:
Q  102 agaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||| || |||||||||||| |||||||||||||||||||| ||| ||||| |||||  ||||||| |  |||||||| ||||| ||| ||||||    
T  16370724 agaaccccgcagttaagcatgtttgacttggagcaattttgggatgggtgacattctgaaaagtttctcataaagcgtgcgaatgaggaaaaaaca 16370629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 11757299 - 11757157
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||  |||||||| |  ||| ||||||| | ||||| |||  ||  |||||||||| || |||| |||     
T  11757299 ccataagaactccacagttaagcgtgcttgacttacagcaatttcgagatgggtgacctaccgggaaatttttcggtaagcgtgtgagtgaggacgaaat 11757200  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
      | | ||||||||| ||||||| |  ||||||||||||||||    
T  11757199 ccgcttaaaagactcttgttggtttgcggggtcagtcggcaat 11757157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 20039493 - 20039371
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||| |||||||||  |||||||||| ||| | | || | ||  |||||||  ||||||||||||||  ||||||| || || |||||||||    
T  20039493 ccataagaactctacagttaagtgtgcttgacttagagtagtctttggattggtgacctattgggaagtttcccggtaagcgtgcgagtgaggacaaaac 20039394  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | ||||||||||| |||||||    
T  20039393 acgctgaaaagactcatgttggt 20039371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 10927024 - 10926878
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  |  |||  ||||||||||||||||||||| | |||||||||||||| |    
T  10927024 ataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaactccacagttaaacgtgcttgacttggagta 10926925  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtga 183  Q
     | || | ||| ||||||| | ||||||||||| |  ||||||||||    
T  10926924 gtctttggatgggtgacctaccgggaagtttcctggtaagcgtgtga 10926878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 30719827 - 30719740
Alignment:
Q  93 caaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtg 180  Q
    |||||||||||||||||||| |||||| ||||  ||||||||||||||||| | | ||||| ||||   |||||||  ||||||||||    
T  30719827 caaaccataagaactccacaattaagcgtgctcaacttggagcaattttgggacgggtgacattctaaaaagtttcttgaaaagcgtg 30719740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 5785973 - 5786043
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagttt 167  Q
    |||||||||||| ||  |||||| || |||||||||||||||||| | |||||||| ||||||| ||||||    
T  5785973 ccataagaactctacgcttaagcgtgtttgacttggagcaattttaggatgagtgatcttctggaaagttt 5786043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 34867858 - 34867964
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||   ||||||||||||| |||||||| ||||| |||| |||||    
T  34867858 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccatagttaagcgtgcttaactttgagca 34867957  T
Q  137 attttgg 143  Q
    |||||||    
T  34867958 attttgg 34867964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 39147067 - 39147104
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  39147067 ccataagaactccacagttaagcgtgcttgacttggag 39147104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 20039552 - 20039513
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcat 76  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  20039552 ataagaattgtttggtactacctatatcaacaagatgcat 20039513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 141
Target Start/End: Complemental strand, 32574732 - 32574632
Alignment:
Q  41 gaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaattt 140  Q
    ||||||||||||||||| ||||| ||||| |||||||        |  | ||||||| |||| |||| || |||||||| ||||||||||||||||||||    
T  32574732 gaattgtttggtactacctatacaaacaaaatgcatctttcttttggtagcccaaactataataacttcatagttaagcgtgcttgacttggagcaattt 32574633  T
Q  141 t 141  Q
    |    
T  32574632 t 32574632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 2194023 - 2194081
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    |||||||||| | ||||||||| ||||||||| | |||||||||||| |||| ||||||    
T  2194023 ggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgacaatgctgaaa 2194081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 8366595 - 8366715
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||||||||| | |||||||| || |||| ||| || | | || | ||| ||||||| ||||||||||| || | ||||| |||| ||  |||||||||    
T  8366595 cataagaactctatagttaagcgtgtttgatttgaagtagtatttggatgggtgacctactgggaagttttccaataagcg-gtgagtgacgacaaaaca 8366693  T
Q  198 aggtgaaaagactcgtgttggt 219  Q
     | |||||||||||||||||||    
T  8366694 cgttgaaaagactcgtgttggt 8366715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 21884010 - 21883961
Alignment:
Q  190 acaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||||||| | ||||||||||||||||||| | |||||||||||| ||||    
T  21884010 acaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 21883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 18750274 - 18750234
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||| |||||||||||||||| |||||||| ||||||||||    
T  18750274 ataacaattgtttggtactacctataccaaaaagatgcatc 18750234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 22556608 - 22556644
Alignment:
Q  41 gaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  22556608 gaattgtttggtactacctatatcaacaagatgcatc 22556644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 19095 - 19243
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||  |||||||||| || ||||||||||    
T  19095 cataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaaca 19194  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
     | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  19195 cgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 19243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 19034 - 19074
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||| ||||    
T  19034 ataagaattgtttggtactacctatatcaacaagattcatc 19074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 17027609 - 17027400
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||| ||||       ||  | | ||   |||||||||||||||||||||| ||||||||||||||||    
T  17027609 ataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagca 17027510  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  |||||||||| || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  17027509 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 17027410  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  17027409 aatcctgaaa 17027400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 23986395 - 23986186
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| ||||  |||||||||||||       ||  | | ||||||||||||||| ||||||||||  ||||||||||||||||    
T  23986395 ataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataagaacttcacagttaagtgtgcttgacttggagca 23986296  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| |||||||||||||||||||| || |||||||| || || ||| || ||| | |||||||||| |||||||| | ||||||||||||||    
T  23986295 attttgggatgggtgaccttctgggaagtttcacggaaagcgtgcgagtgaggagaagacacgctgaaaagacttgtgttggtttgtggggtcagtcggc 23986196  T
Q  237 aattctgaaa 246  Q
    ||||||||||    
T  23986195 aattctgaaa 23986186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 20850389 - 20850598
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||| ||||||| |||| ||||||||||||||       ||  | | ||  |||||||||||| |||||||||| ||||||||||||||||    
T  20850389 ataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactctacagttaagcgtgcttgacttggagca 20850488  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  20850489 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 20850588  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  20850589 aatcctgaaa 20850598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 9352190 - 9352339
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| |  ||||||||| ||  ||||||| || || |||||||||    
T  9352190 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacctggaagtttctcggtaagcgtgcgagtgaggacaaaac 9352289  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  9352290 atgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 9352339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 7912438 - 7912587
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||  || || |||||||||    
T  7912438 ccataagaactccatagttaaacgtgcttgacttggagcaattttggaatgggtgacctgctgggaagtttcccgttaagcgtacgagtgaggacaaaac 7912537  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||| ||||||| | |||||| |||||||||| ||||||    
T  7912538 acgctgaaaagactcatgttggtttgtggggttagtcggcaatcctgaaa 7912587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 13191591 - 13191389
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | |   ||||||||||| ||||||||||| ||||||||||||||||    
T  13191591 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataagaacttcacagttaagcgtgcttgacttggagca 13191492  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||  ||| ||||||  | |||||||||||||| ||||||| || || |||||||| |   ||||||||||||||||||| | ||||||||||||||    
T  13191491 attttgagatgggtgaccaaccgggaagtttcccgataagcgtgcgagtgaggacaaaatacactgaaaagactcgtgttggtttgtggggtcagtcggc 13191392  T
Q  237 aat 239  Q
    |||    
T  13191391 aat 13191389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 7911946 - 7912155
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |||||||||||||||||||| || ||||||||||||||||    
T  7911946 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttatgcttgcttgacttggagca 7912045  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||| ||| ||  |||| || || || |||||||||| | |||||||||| |||||||| | |||||||||||| |    
T  7912046 attttgggatgggtgacctaccgggaagattctcggtaagcatgcgagtgaggacaaaacacgctgaaaagacttgtgttggtttgtggggtcagtcgac 7912145  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  7912146 aatcctgaaa 7912155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 13492460 - 13492603
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatg-gggacaaaa 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | ||||||||||||   ||||||| || || || | ||||    
T  13492460 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggaaaaaaa 13492559  T
Q  196 caaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    || | ||||||||||||||||||| | |||||||||||||||||    
T  13492560 cacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 13492603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 13492857 - 13493067
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||| |||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| |||||||||| |||||    
T  13492857 ataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttagagca 13492956  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggac-aaaacaaggtgaaaagactcgtgttggtctatggggtcagtcgg 235  Q
    ||||||| ||| ||||||| | || ||||| ||||  ||||||| || || |||| |||||| | ||||||||||||||||| | | | ||||||||| |    
T  13492957 attttgggatgggtgacctaccggaaagttacccggtaagcgtgcgagtgaggacaaaaacatgctgaaaagactcgtgttgatttgtagggtcagtcag 13493056  T
Q  236 caattctgaaa 246  Q
    |||| ||||||    
T  13493057 caatcctgaaa 13493067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 28780238 - 28780387
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | ||||||||| | |  ||| ||| || || ||| |||||    
T  28780238 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttctggtaagtgtgcgagtgaggataaaac 28780337  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    |   ||||||||||||||||||| | ||||||||| || |||| ||||||    
T  28780338 attttgaaaagactcgtgttggtttgtggggtcagccgacaatgctgaaa 28780387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 239
Target Start/End: Complemental strand, 9440881 - 9440733
Alignment:
Q  91 cccaaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatgggga 190  Q
    ||||||||||||||||| ||||||||||  || ||||||| |||||||||||| ||| |||||||||| ||||||||||||||||  |||  | ||  ||    
T  9440881 cccaaaccataagaacttcacagttaagtgtgtttgactttgagcaattttgggatgggtgaccttcttggaagtttcccgaaaaatgtgcaagtgatga 9440782  T
Q  191 caaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    ||||| | | |||||| ||||||| |||| | |||||||||||||||||    
T  9440781 caaaatacgctgaaaaaactcgtgctggtttgtggggtcagtcggcaat 9440733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 20896766 - 20896563
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       |   | | ||  ||||||||||||||| ||||||| |||||| |||||||||    
T  20896766 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactccacggttaagcgtgcttggcttggagca 20896667  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatgggga-caaaacaaggtgaaaagactcgtgttggtctatggggtcagtcgg 235  Q
    ||||||| ||| ||||||| | ||||| |||||||  ||| ||| || || |||  ||||||   ||||||||||||||||||| | ||||||||| |||    
T  20896666 attttgggatgggtgacctaccgggaaatttcccggtaagtgtgcgagtgaggagaaaaacacactgaaaagactcgtgttggtttgtggggtcagccgg 20896567  T
Q  236 caat 239  Q
    ||||    
T  20896566 caat 20896563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 2890857 - 2890714
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||| |  | |  | | ||| ||||||| ||| |||||||||||| ||||||| || || |||||||||    
T  2890857 ccataagaactccacagttaagcgtgcttgacttgaaatagtactaggatgggtgacctactgagaagtttcccgataagcgtgcgagtgaggacaaaac 2890758  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaatt 240  Q
    | | | ||||||||||||||||| | | |||||||||| |||||    
T  2890757 acgctaaaaagactcgtgttggtttgtagggtcagtcgacaatt 2890714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 16520096 - 16520170
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccg 171  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| | |||||||||||||    
T  16520096 ccataagaactccacagttaagcgtgcttgacttggagcaattttgagatgggtgacctgccgggaagtttcccg 16520170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 23776570 - 23776717
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||| |||| |||||| | ||||||||||||||||||||| |||  |||||| |||||||||||||    || |||| || ||  |||||||||    
T  23776570 cataagaacttcaca-ttaagcgtacttgacttggagcaattttgggatggatgacctactgggaagtttcctagtaaacgtgcgagtgacgacaaaaca 23776668  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
     | |||||||| |||||||||| | ||| ||||||||||||| ||||||    
T  23776669 cgctgaaaagattcgtgttggtttgtggagtcagtcggcaatcctgaaa 23776717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 2681294 - 2681089
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||||||||||||  ||| ||||||||||||||       ||  | | ||  |||||||||||||||| |||||| ||||| | ||||| ||    
T  2681294 ataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacaattaagcgtgcttaatttggaaca 2681195  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| || ||    ||||||||||||    |||||||  | || |||||||||| | ||| ||||||||||||||| | ||||||||||||||    
T  2681194 attttgggatgggttac----tgggaagtttcctagtaagcgtgcaagtgaggacaaaacacgttgagaagactcgtgttggtttgtggggtcagtcggc 2681099  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  2681098 aatcctgaaa 2681089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 2720581 - 2720439
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||  |||||||||||||| | | || | ||| ||||| |  ||||||||||||||| ||||||| || || | |||||||    
T  2720581 ccataagaactccacagttaagtgtgcttgacttggagtagtctttggatgggtgacatattgggaagtttcccgataagcgtgcgagtgagaacaaaac 2720482  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | ||| ||||||||||| ||| |   |||||||||||||||    
T  2720481 acgctgagaagactcgtgtcggtttgcagggtcagtcggcaat 2720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 12194456 - 12194593
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| | |||  ||||||| | | |||||| ||  ||| ||||||| |  |||||||||    
T  12194456 ccataagaactccacagttaagcatgtttgacatggagcaattttaggatggatgaccttttagaaagttttccagaaaacgtgtgagtttggacaaaac 12194555  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcgg 235  Q
    |   ||||||||||| ||||||| | |||||||||||||    
T  12194556 acactgaaaagactcatgttggt-tttggggtcagtcgg 12194593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 253
Target Start/End: Complemental strand, 17731124 - 17730971
Alignment:
Q  100 taagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaag 199  Q
    ||||||||||||| |||||| ||||||||||||||||||||||  ||  ||||||| | || ||||||  ||  |||||||  | || |||||||||| |    
T  17731124 taagaactccacatttaagcgtgcttgacttggagcaattttgagataggtgacctaccggaaagtttatcggtaagcgtgcaagtgaggacaaaacacg 17731025  T
Q  200 gtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtct 253  Q
     | ||||||||||||||||| | | |||||||||| |||| |||| | ||||||    
T  17731024 ctaaaaagactcgtgttggtttgtagggtcagtcgacaatcctgagagtcgtct 17730971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 3652658 - 3652786
Alignment:
Q  104 aactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtga 203  Q
    |||||||||||||||| |||||||||||||| | | || | ||| ||||||| | |||||| ||||||  ||||||| || || |||||||| ||| |||    
T  3652658 aactccacagttaagcttgcttgacttggagtagtctttggatgggtgacctaccgggaagcttcccggtaagcgtgcgagtgaggacaaaaaaagctga 3652757  T
Q  204 aaagactcgtgttggtctatggggtcagt 232  Q
    |||||||| ||||||| | | ||||||||    
T  3652758 aaagactcttgttggtttgtagggtcagt 3652786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 17851048 - 17851188
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaa 198  Q
    ||||||||||||||||||||| |||||||||||||| | | || | ||| | ||||| |||||||||||||    | ||||| || |  |||||||||||    
T  17851048 ataagaactccacagttaagcgtgcttgacttggagtagtcttcggatgggagacctactgggaagtttcctagtacgcgtgcgagttaggacaaaacaa 17851147  T
Q  199 ggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |  |||||||||||||||||| | | |||||| ||||||||    
T  17851148 gtcgaaaagactcgtgttggtttgtagggtcaatcggcaat 17851188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 28583138 - 28583234
Alignment:
Q  143 gtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||||||| || |||||| |||||||||  ||||||||||| |||||||||||||   ||||||||||| |||| || | |||||||||||||||||    
T  28583138 gtatgagttactttctggaaagtttcccagaaagcgtgtgagtggggacaaaacatactgaaaagactcatgttagtttgtggggtcagtcggcaat 28583234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 9440327 - 9440184
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| ||||||||||  ||||||| ||||||||||||| | ||| |||||||| |||||||||||   |||| ||||||||||  |||||||     
T  9440327 ccataagaacttcacagttaagtgtgcttgatttggagcaatttttggatgggtgaccttatgggaagtttctaaaaaaacgtgtgaatgatgacaaaat 9440228  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaatt 240  Q
    |   | |||| |||||||||| | | |||| ||||||| |||||    
T  9440227 atactaaaaaaactcgtgttgatttgtgggatcagtcgacaatt 9440184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 31416106 - 31415965
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||||| |||||| || ||||||| ||  | |||||| |||   || ||| ||| ||||||| |||||| ||||||| || |||||||||    
T  31416106 ccataagaactccacaattaagcgtgtttgacttagattagttttgggatggacgatcttatggaaagtttctcgaaaaacgtgtgagtgaggacaaaac 31416007  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | |||||||| |||||||||| | |||| ||||||||||||    
T  31416006 acgctgaaaaga-tcgtgttggtttgtgggatcagtcggcaat 31415965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 21312100 - 21312256
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||| |||| |||||| | |||||||||||||||| | ||   ||||||||||| | |||||||||||||  ||| |||| | ||  |||||||||    
T  21312100 cataagaaatccatagttaaacgtgcttgacttggagcagtcttatgatgagtgacctaccgggaagtttcccggtaagtgtgtaagtgaagacaaaaca 21312199  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
       |||||||||| |||||||| | | |||||||||| |||| || ||| |||||||    
T  21312200 cattgaaaagactggtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctg 21312256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 28065853 - 28065754
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||||| ||||||||| ||||||| ||||| |||||  ||| || |||||  | ||||||| ||||||||||||||||||  ||||||||    
T  28065853 ccataagaactccacaattaagcatgtttgactttgagcagttttgtgatgggtaacctttcgagaagttt-ccgaaaagcgtgtgaatgatgacaaaac 28065755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 11062413 - 11062555
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| |||||||   || ||||||||||| || |  |||| || |||||||||    
T  11062413 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcggaaagtttcccgataaacccgtgagtgaggacaaaac 11062512  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | |||||| | | |||||| | ||| | |||||||||||||    
T  11062513 acgctgaaaaaatttgtgttgatttatagagtcagtcggcaat 11062555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 254
Target Start/End: Original strand, 3653048 - 3653183
Alignment:
Q  115 taagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtg 214  Q
    ||||| |||||||||||||| | | || | ||| |||||||   | |||||||||||| ||||||| ||    |||||||||| | |||||||||||||     
T  3653048 taagcgtgcttgacttggagtagtctttggatgggtgacctatcgagaagtttcccgataagcgtgcga----ggacaaaacacgctgaaaagactcgta 3653143  T
Q  215 ttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    ||||| | | |||||| |||||||| || |||||||||||    
T  3653144 ttggtttgtagggtcaatcggcaatgcttaaaatcgtctg 3653183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 15929710 - 15929796
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtga 183  Q
    ||||||||||||||||||||||| || || || || ||||||||||| ||| |||||||| |  ||||||||||  ||||| |||||    
T  15929710 ccataagaactccacagttaagcgtgtttaacatgaagcaattttgggatgggtgaccttttatgaagtttcccataaagcatgtga 15929796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 1991682 - 1991801
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||| ||||||||| |||  |||| |||||| | |||| | ||| |||||||||||  |||||| ||||||||| ||||| ||  ||||||  |    
T  1991682 cataagaacttcacagttaaacattattgatttggagtagtttttggatgggtgaccttctgaaaagttttccgaaaagcatgtgagtgaagacaaagta 1991781  T
Q  198 aggtgaaaagactcgtgttg 217  Q
     | |||||| ||||||||||    
T  1991782 cgctgaaaaaactcgtgttg 1991801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 2891311 - 2891170
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||| ||||||||||||||   ||||||| |||||| | | || | ||| ||||||| ||  || |||| |||  ||||||| || || |||||||||    
T  2891311 ccataaaaactccacagttaaatgtgcttgatttggagtagtctttggatgggtgacctactacgatgttt-ccggtaagcgtgcgagtgaggacaaaac 2891213  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | |||||||| |||||||||| | | |||||||||||||||    
T  2891212 acgctgaaaagattcgtgttggtttgtagggtcagtcggcaat 2891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 6330929 - 6330897
Alignment:
Q  98 cataagaactccacagttaagcatgcttgactt 130  Q
    |||||||||||||||||||||| ||||||||||    
T  6330929 cataagaactccacagttaagcgtgcttgactt 6330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 6330990 - 6330950
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| |||||| |||||||    
T  6330990 ataagaattgtttggtactacctatatcaacaatatgcatc 6330950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 17205407 - 17205447
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| | |||||||||||| ||||    
T  17205407 ataagaattgtttggtactacctttaccaacaagattcatc 17205447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 20735763 - 20735803
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||| |||||| |||| ||||||||||||||    
T  20735763 ataagaattgtttgatactacttatatcaacaagatgcatc 20735803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 21312039 - 21312079
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  21312039 ataagaattgttaggtactacctatatcaacaagatgcatc 21312079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 27334229 - 27334265
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatg 73  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  27334229 ataagaattgtttggtactacctatatcaacaagatg 27334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 27394969 - 27395005
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatg 73  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  27394969 ataagaattgtttggtactacctatatcaacaagatg 27395005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 32292953 - 32292985
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaa 69  Q
    ||||||||||||||||||||| |||||||||||    
T  32292953 ataagaattgtttggtactacctataccaacaa 32292985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 4e-44; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 97 - 247
Target Start/End: Original strand, 28495982 - 28496132
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||  ||||||||||||||  ||||||| || || |||||||||    
T  28495982 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctattgggaagtttcccggtaagcgtgcgagtgaggacaaaac 28496081  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaa 247  Q
    | | ||||||||||||||||||| | ||||||||||||||||| |||||||    
T  28496082 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaaa 28496132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 2189212 - 2189421
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||| ||||| |||| ||||||||||||||       ||| | | ||   |||||||||||||||||||||| ||||||||||||||||    
T  2189212 ataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgcttgacttggagca 2189311  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||||||||||| | |||||||||||||  |||||||||| || |||||||||| | ||| ||||||||||||| | | ||||| ||||||||    
T  2189312 attttgggatgagtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgagaagactcgtgttgatttgtggggacagtcggc 2189411  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  2189412 aatcctgaaa 2189421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 9125027 - 9125236
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||| ||||||    
T  9125027 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactcggagca 9125126  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||| |||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  9125127 attttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggc 9125226  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  9125227 aatcctgaaa 9125236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 2941835 - 2941633
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  2941835 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 2941736  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || ||| |||||| | ||||||||||||||||||| | || |||||||||||    
T  2941735 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggagaaaacacgctgaaaagactcgtgttggtttgtgcggtcagtcggc 2941636  T
Q  237 aat 239  Q
    |||    
T  2941635 aat 2941633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 2193324 - 2193533
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||   |||| ||||||||||||||||| ||||||| ||||||||    
T  2193324 ataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacagttaagcgtgcttgatttggagca 2193423  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  |||||||||| || |||||||||| | ||||||||||||||||| | | ||||||||||||||    
T  2193424 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcggc 2193523  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  2193524 aatcctgaaa 2193533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 13125214 - 13125004
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| ||||  |||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  13125214 ataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 13125115  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggac-aaaacaaggtgaaaagactcgtgttggtctatggggtcagtcgg 235  Q
    ||||||| ||| ||||||| | ||||||||||||   ||||||| || || |||| |||||| | ||||| ||||||||||||| | |||||||||||||    
T  13125114 attttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaaaaacacgctgaaaggactcgtgttggtttgtggggtcagtcgg 13125015  T
Q  236 caattctgaaa 246  Q
    |||| ||||||    
T  13125014 caatcctgaaa 13125004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 239
Target Start/End: Original strand, 42515612 - 42515814
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||| ||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  42515612 ataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 42515711  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| |  |||| ||| |||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  42515712 attttgggatgggtgacctacatggaaattttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 42515811  T
Q  237 aat 239  Q
    |||    
T  42515812 aat 42515814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 13122523 - 13122373
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggac-aaaa 195  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||| ||||    
T  13122523 ccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaaa 13122424  T
Q  196 caaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    || | ||||||||||||||||||| | |||||||| |||||||| ||||||    
T  13122423 cacgctgaaaagactcgtgttggtttgtggggtcaatcggcaatcctgaaa 13122373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 34405609 - 34405467
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||    
T  34405609 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaac 34405510  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | ||||||||| ||||||| | | |||||||||||| ||||    
T  34405509 acgctgaaaagacccgtgttgatttgtggggtcagtcgacaat 34405467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 7646496 - 7646347
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||| ||  ||| ||| || || |||||||||    
T  7646496 ccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctcggtaagtgtgcgagtgaggacaaaac 7646397  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  7646396 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 7646347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 7646543 - 7646700
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | || |||||| |||| ||||||| || || |||||||||    
T  7646543 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccgataagcgtgcgagtgaggacaaaac 7646642  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    |   ||||||||||||||||||| | |||||| ||||| |||| || ||| |||||||    
T  7646643 acactgaaaagactcgtgttggtttgtggggttagtcgacaatcctaaaagtcgtctg 7646700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 36422381 - 36422528
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||| | |||||||||||||  ||| ||| || || ||||||||||    
T  36422381 cataagaactccacagttaagcgtgcttgacttggagcaatttggg-atgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaaca 36422479  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
     | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  36422480 cgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 36422528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 43776308 - 43776186
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | ||||||||| ||   ||||||| |||||  ||||||||    
T  43776308 ccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctgcggggaagttttccagtaagcgtgcgaatgaagacaaaac 43776209  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | |||||||||||||||||||    
T  43776208 acgctgaaaagactcgtgttggt 43776186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 18833415 - 18833563
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| || ||||||| |||||||||||| ||| ||||||| | |||||||||||||  || |||| || || ||||||||||    
T  18833415 cataagaactccacagttaagcgtgtttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaaacgtgcgagtgaggacaaaaca 18833514  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
     | ||||||||||||||||| | | |||| | |||||||||| ||||||    
T  18833515 cgctgaaaagactcgtgttgatttgtgggataagtcggcaatcctgaaa 18833563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 254
Target Start/End: Complemental strand, 29039096 - 29038881
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaat 138  Q
    ||||||||||||||||||| |||| |||||| |||||||        || || |||  |||||||||||| ||| |||||| |||||||||||||| | |    
T  29039096 aagaattgtttggtactacctatatcaacaacatgcatcttctttttgataatccattccataagaactctacatttaagcgtgcttgacttggagtagt 29038997  T
Q  139 tttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaa 238  Q
     || | |||  |||||| | || ||||||||||  |||||||||| || |||||||||| | ||||||||||||||||||| | | ||||||||||||||    
T  29038996 ctttggatggatgacctaccggtaagtttcccggtaagcgtgtgactgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaa 29038897  T
Q  239 ttctgaaaatcgtctg 254  Q
    | || ||| |||||||    
T  29038896 tgcttaaagtcgtctg 29038881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 221
Target Start/End: Complemental strand, 5406666 - 5406481
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||| ||| |||| ||||||||||||||        |    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  5406666 ataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaactccacagttaagcgtgcttgactttgagca 5406567  T
Q  137 attttggtatgagtgaccttctgggaagtttcccg-aaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtct 221  Q
    ||||||| |||  |||| |||||| |||||| ||| |||| |||| || || ||||||||||   |||||| ||||||||||||||    
T  5406566 attttgggatggatgactttctggaaagttttccgaaaaaacgtgcgagtgaggacaaaacacactgaaaacactcgtgttggtct 5406481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 254
Target Start/End: Complemental strand, 6719152 - 6718936
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |||||||||||||| |||||||| |||||||||||||| |    
T  6719152 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccagagttaagcgtgcttgacttggagta 6719053  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    |||| || ||| ||||| |   ||||| |||||||  ||||||| || || ||||||||||   |||||||| |||||||||| | ||||||||||| ||    
T  6719052 atttggg-atgggtgacatatcgggaactttcccggtaagcgtgcgagtgaggacaaaacacactgaaaagaatcgtgttggtttgtggggtcagtcagc 6718954  T
Q  237 aattctgaaaatcgtctg 254  Q
    ||| || ||| |||||||    
T  6718953 aatcctaaaagtcgtctg 6718936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 2466052 - 2466171
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||| | ||||| |||||||  |||| ||  | || |||||||||    
T  2466052 ccataagaactccacagttaagcgtgcttgacttggagcaatttcgggatgggtgacctaccgggaaatttcccggtaagcatgcaagtgaggacaaaac 2466151  T
Q  197 aaggtgaaaagactcgtgtt 216  Q
    | | ||||||||||||||||    
T  2466152 acgctgaaaagactcgtgtt 2466171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 28495626 - 28495488
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||           |||||||| || || |||||||||    
T  28495626 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggg-----------aaagcgtgcgagtgaggacaaaac 28495538  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
      | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  28495537 ccgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 28495488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 2465801 - 2465935
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||| |||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  2465801 ataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 2465900  T
Q  137 attttggtatgagtgaccttctgggaagtttcccg 171  Q
    ||||||| ||| ||||||| | ||||| |||||||    
T  2465901 attttgggatgggtgacctaccgggaaatttcccg 2465935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 42515220 - 42515379
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| ||||| | |  |||| |||  ||  ||||||| |  || |||||||||    
T  42515220 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacataccaggaactttttcggtaagcgtgcgggtgaggacaaaac 42515319  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctgtg 256  Q
    | | ||||||||||||||||||| | | ||||||||||||||| || ||| |||||||||    
T  42515320 acgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctgtg 42515379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 26419201 - 26419104
Alignment:
Q  149 gtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    ||||||||||| ||| |||| |||||| | ||||| || |||||||||| | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  26419201 gtgaccttctgagaattttctcgaaaatcatgtgagtgaggacaaaacatgttgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaa 26419104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 252
Target Start/End: Complemental strand, 22529249 - 22529098
Alignment:
Q  101 aagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaagg 200  Q
    ||||||| ||||||||||| || ||||||||||| | | || | ||| ||||||| ||| |||||||| ||  |||||||||| || |||||||| | |     
T  22529249 aagaacttcacagttaagcgtgtttgacttggagtagtctttggatgggtgacctactgagaagtttctcggtaagcgtgtgagtgaggacaaaatacgc 22529150  T
Q  201 tgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtc 252  Q
    ||||||||||| ||||||| | | |||||||||| |||| || ||| |||||    
T  22529149 tgaaaagactcatgttggtttgtagggtcagtcgacaatgcttaaagtcgtc 22529098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 43233136 - 43233234
Alignment:
Q  148 agtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    |||||||| | | ||||||| |||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  43233136 agtgacctaccgagaagttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 43233234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 11372575 - 11372636
Alignment:
Q  93 caaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgacc 154  Q
    |||||||||||||||||| ||||||||| | |||||||  ||||||||||| ||||||||||    
T  11372575 caaaccataagaactccaaagttaagcacgtttgacttatagcaattttgggatgagtgacc 11372636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 679944 - 680015
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttc 168  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| ||||||| | ||||||||||    
T  679944 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctgccgggaagtttc 680015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 1628835 - 1628913
Alignment:
Q  91 cccaaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcc 169  Q
    |||| ||||||||||||||| |||||||  |  ||| |||||||||||||||| ||| ||||||| ||| |||||||||    
T  1628835 cccataccataagaactccatagttaagtgtatttggcttggagcaattttgggatgggtgacctcctgcgaagtttcc 1628913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 6748003 - 6747937
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    |||||||||| | ||||||||||||||||||| | | ||||||||||||||| || ||| |||||||    
T  6748003 ggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctg 6747937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 25182429 - 25182571
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||| ||||       ||  ||| ||  ||||||||||| ||||||||||  || ||||||||||| |    
T  25182429 ataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaacttcacagttaagtgtgtttgacttggagta 25182528  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgt 179  Q
     | || | |||   |||||||||||||||||| | ||||||||    
T  25182529 gtctttggatggaggaccttctgggaagtttctcaaaaagcgt 25182571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 35527139 - 35527102
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  35527139 ccataggaactccacagttaagcatgcttgacttggag 35527102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 46425869 - 46425906
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  46425869 ccataagaactccacagttaagcgtgcttgacttggag 46425906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 6747676 - 6747636
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  6747676 ataagaattgtttggtactacctatatcaacaagatgcatc 6747636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 11517467 - 11517427
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  11517467 ataagaattgtttggtactacctatatcaacaagatgcatc 11517427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 6747533 - 6747482
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||||||||||| |||||||||| |||||||| | | |||||||||||||||    
T  6747533 ggacaaaacaagttgaaaagacttgtgttggtttgtagggtcagtcggcaat 6747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 36015487 - 36015452
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgc 74  Q
    |||||||||||||||||||||||| |||||||||||    
T  36015487 aagaattgtttggtactacatatatcaacaagatgc 36015452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 42515160 - 42515199
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcat 76  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  42515160 ataagaattgtttggtactacctatatcaacaagatgcat 42515199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 20966179 - 20966241
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctg 159  Q
    ||||||||||| ||||||||| ||||| ||||||| | ||||||||| ||| ||||| |||||    
T  20966179 ccataagaacttcacagttaaacatgcatgacttgtatcaattttgggatgggtgacattctg 20966241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 35474139 - 35474017
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| || ||||||||||| | | || | ||| ||||| | | ||||| |||| ||  ||| ||| || || |||||||||    
T  35474139 ccataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgacgtaccgggaattttctcggtaagtgtgcgagtgaggacaaaac 35474040  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | ||||| |||| ||||||||    
T  35474039 acgctgaaatgacttgtgttggt 35474017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 219
Target Start/End: Complemental strand, 29357534 - 29357352
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||  |||| ||||||||||||||       ||| | |||    |||||||||| ||||||||| | || ||||||| ||| |    
T  29357534 ataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataagaactacacagttaaccgtgtttgacttagagta 29357435  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
     | ||   |||  |||||||| || ||||| | ||||||||||| || || | ||||| || | |||||||||||||||||||    
T  29357434 gtcttaagatggatgaccttccggtaagttcctcgaaaagcgtgcgagtgagaacaaagcacgttgaaaagactcgtgttggt 29357352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 219
Target Start/End: Complemental strand, 37671778 - 37671657
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||| ||| |||||| |||||| ||||||| ||||||||||||||  ||| || ||||| ||  ||||||| |  ||||||||||| || |||| |||||    
T  37671778 catatgaaatccacatttaagcgtgcttgaattggagcaattttgtgatgggtcaccttttgaaaagtttctcataaagcgtgtgagtgaggaccaaaca 37671679  T
Q  198 aggtgaaaagactcgtgttggt 219  Q
       | ||||| |||||||||||    
T  37671678 cactaaaaagtctcgtgttggt 37671657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 2611730 - 2611690
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  2611730 ataagaattgtttggtactatctataacaacaagatgcatc 2611690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 254
Target Start/End: Complemental strand, 3305365 - 3305209
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||| |||| ||||||||||| ||||||| |||||| | | || | ||| ||||||| | || |||||||| |  ||| ||| || || | ||||||||    
T  3305365 cataaaaacttcacagttaagcgtgcttgatttggagtagtctttggatgggtgacctaccggaaagtttcctggtaagagtgcgagtgagaacaaaaca 3305266  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
     | ||||||||||||||||| | | | || |||||| ||||| || ||| |||||||    
T  3305265 cgctgaaaagactcgtgttgatttgtaggatcagtcagcaatacttaaagtcgtctg 3305209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 219
Target Start/End: Original strand, 9623337 - 9623457
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaa 198  Q
    ||||||||||||||||||||| || ||||||||||  | | || | ||| ||||| ||||| ||||||| | ||||||| |  || || ||||||| ||     
T  9623337 ataagaactccacagttaagcgtgtttgacttggactagtctttggatgggtgacgttctgagaagttttctgaaaagccttcgagtgaggacaaagcac 9623436  T
Q  199 ggtgaaaagactcgtgttggt 219  Q
    | || |||||||| |||||||    
T  9623437 gctgtaaagactcatgttggt 9623457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 35474199 - 35474159
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||| ||||||| |||| ||||||||||||||    
T  35474199 ataagaattgtttagtactacttatatcaacaagatgcatc 35474159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 36422320 - 36422360
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  36422320 ataagaattgttgggtactacctatatcaacaagatgcatc 36422360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 43233481 - 43233521
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  43233481 ataagaattgtttggtactatctatatcaacaagatgcatc 43233521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 46425809 - 46425849
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||| ||| |||| ||||||||||||||    
T  46425809 ataagaattgtttggtattacctatatcaacaagatgcatc 46425849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 245154 - 245359
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | || |||||||||||||||||||   |||| |||||||||| |||||    
T  245154 ataagaattgtttggtactacctatatcaacaagatgcatcttcttt-cggtagcctaaaccataagaactccaca---aagcgtgcttgacttagagca 245249  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||  ||| |||||||||||||||||||| || ||||||||||| || |||||||||| ||||||||||||||||||||| |  |||||||||||||    
T  245250 attttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacacggtgaaaagactcgtgttggtttgcggggtcagtcggc 245349  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  245350 aatcctgaaa 245359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 245675 - 245825
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaa 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |  ||| |||| ||| ||||||||||| || |||| |||||| || ||||||||    
T  245675 accataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaa 245774  T
Q  196 caaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    || | ||||||||||||||||||| | ||||||||||||| ||| ||||||    
T  245775 cacgttgaaaagactcgtgttggtttgtggggtcagtcgggaatcctgaaa 245825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 245583 - 245674
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgac 128  Q
    ||||||||||||||||||||| |||| ||||||||||||||       |   | || |||||||||||||||||||||||||| ||||||||    
T  245583 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtgcttgac 245674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 14572222 - 14572017
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | || |||||||||||||||||||   |||| |||||||||| |||||    
T  14572222 ataagaattgtttggtactacctatatcaacaagatgcatcttcttt-cggtagcctaaaccataagaactccaca---aagcgtgcttgacttagagca 14572127  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||  ||| |||||||||||||||||||| || ||||||||||| || |||||||||| ||||||||||||||||||||| |  |||||||||||||    
T  14572126 attttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacacggtgaaaagactcgtgttggtttgcggggtcagtcggc 14572027  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  14572026 aatcctgaaa 14572017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 49998704 - 49998913
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| || |||||||||||||    
T  49998704 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttggagca 49998803  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||| ||| || || |||||||||| | ||||||||||||||||||| | ||||| ||||||||    
T  49998804 attttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggacagtcggc 49998903  T
Q  237 aattctgaaa 246  Q
    ||||||||||    
T  49998904 aattctgaaa 49998913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 247
Target Start/End: Original strand, 17628579 - 17628789
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||||||||||||||||||       ||| | ||||| ||||||||| ||||||||| ||| ||| ||||||||||||    
T  17628579 ataagaattgtttggtactacctataccaacaagatgcatcttcttttcgatagcccaacccataagaattccacagttgagcgtgcctgacttggagca 17628678  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||  ||| |||||||||| ||||| |||||  ||||||||||| || ||||||||||   || ||||||| |||||||| | ||| ||||||||||    
T  17628679 attttgagatgggtgaccttctaggaagattcccataaagcgtgtgagtgaggacaaaacacactggaaagacttgtgttggtatgtggagtcagtcggc 17628778  T
Q  237 aattctgaaaa 247  Q
    ||| |||||||    
T  17628779 aatcctgaaaa 17628789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 4127430 - 4127281
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||| ||   |||||||||||||  |||||||||| || |||||||||    
T  4127430 ccataagaactccacagttaagcatgattggcttggagcaattttgggatgggtgagctatcgggaagtttcccggtaagcgtgtgagtgaggacaaaac 4127331  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  4127330 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 4127281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 254
Target Start/End: Complemental strand, 44470946 - 44470730
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  ||| ||  ||||||||||||||||||||||| ||||||||||||||||    
T  44470946 ataagaattgtttggtactacctatatcaacaagatgcatcttctgttcgt-aactcattccataagaactccacagttaagcgtgcttgacttggagca 44470848  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| |||  |||||| | |||||||||||||  ||||||| || || |||||||||| | || |||||||||||||||| | | |||||||||  |    
T  44470847 attttgggatggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctggaaagactcgtgttggtttgtagggtcagtcaac 44470748  T
Q  237 aattctgaaaatcgtctg 254  Q
    |||||| ||| |||||||    
T  44470747 aattcttaaagtcgtctg 44470730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 246
Target Start/End: Complemental strand, 14571701 - 14571551
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaa 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |  ||| |||| ||| ||||||||||| || |||| |||||| || ||||||||    
T  14571701 accataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaa 14571602  T
Q  196 caaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    || | ||||||||||||||||||| | ||||||||||||| ||| ||||||    
T  14571601 cacgttgaaaagactcgtgttggtttgtggggtcagtcgggaatcctgaaa 14571551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 27578529 - 27578320
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||| |||||| |||| |||| ||||||||||||||       ||  | |||||||||||||||||||| |||||||| |||||||||| || ||    
T  27578529 ataagaattatttggtgctacctatatcaacaagatgcatcttcttttcggtatcccaaaccataagaactccatagttaagcgtgcttgacttcgaaca 27578430  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||||| ||||||||||||||||| |||| ||||||| || || |||||||||| |  ||||||||||||| |||| | |||| ||||||  |    
T  27578429 attttgggatgagcgaccttctgggaagttttccgacaagcgtgcgagtgaggacaaaacacgcagaaaagactcgtgatggtttgtgggatcagtcaac 27578330  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  27578329 aatcctgaaa 27578320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 7678634 - 7678485
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||| | |||||||||||||  ||| ||| || || |||||||||    
T  7678634 ccataagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaac 7678535  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||| ||| | |||||||||||| |||| ||||||    
T  7678534 acgctgaaaagactcgtgtaggtttgtggggtcagtcgacaatgctgaaa 7678485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 35871755 - 35871904
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   || ||||||||||  || |||| || || |||||||||    
T  35871755 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcggaaagtttcccggtaaacgtgcgagtgaggacaaaac 35871854  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||| |||||||||||| ||||||    
T  35871855 acgctgaaaagactcgtgttggtttgtgggatcagtcggcaatcctgaaa 35871904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 251
Target Start/End: Complemental strand, 44471397 - 44471183
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||| ||||||||    
T  44471397 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggagca 44471298  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||| |||||||  ||||| | || || |||||||||| | || |||||||||||||||| | | |||||||||| |    
T  44471297 attttgggatgggtgacctaccgggaaatttcccggtaagcgggcgagtgaggacaaaacatgctggaaagactcgtgttggtttgtagggtcagtcgac 44471198  T
Q  237 aattctgaaaatcgt 251  Q
    |||||| ||| ||||    
T  44471197 aattcttaaagtcgt 44471183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 12692071 - 12691911
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  12692071 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 12691972  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||||| ||| ||||||| |||||||||||||||  ||||||| || || ||||||||||    
T  12691971 attttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaaaaca 12691911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 27578304 - 27578177
Alignment:
Q  91 cccaaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatgggga 190  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||  ||| |||| || || |||    
T  27578304 cccaaactataagaacttcacagttaagcgtgcttgacttggagcagttttgggatgagtgaccttatgggaagtttccctgaaaacgtgcgagtgagga 27578205  T
Q  191 caaaacaaggtgaaaagactcgtgttgg 218  Q
    ||||||| | ||||||||||||||||||    
T  27578204 caaaacacgctgaaaagactcgtgttgg 27578177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 23350295 - 23350146
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||| |||  |||||| | | |||||||| |   |||||||||| || |||||||||    
T  23350295 ccataagaacttcatagttaagcgtgcttgacttggagcaattttgggatggatgacctaccgagaagtttctctgtaagcgtgtgagtgaggacaaaac 23350196  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    |   ||||||||||||||||||| | ||||||||||||||||||||||||    
T  23350195 acactgaaaagactcgtgttggtttgtggggtcagtcggcaattctgaaa 23350146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 24629505 - 24629299
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | |   ||||||||| ||||||||||||| ||||||||||||||||    
T  24629505 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataagaattccacagttaagcgtgcttgacttggagca 24629406  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||    ||||  ||||||| || || |||||||||| | |||||||||||||||| || | ||||||||||||||    
T  24629405 attttgggatgggtgacctaccgggaa---acccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtggggtcagtcggc 24629309  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  24629308 aatcctgaaa 24629299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 91 - 246
Target Start/End: Original strand, 13266208 - 13266363
Alignment:
Q  91 cccaaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatgggga 190  Q
    |||||| || |||||| |||||||||||| |||||||||| ||| |||||| | ||| |||||||| |||||||||| |||||||| ||| || || |||    
T  13266208 cccaaatcacaagaaccccacagttaagcgtgcttgactttgagaaattttaggatgggtgaccttttgggaagttttccgaaaagtgtgcgagtgagga 13266307  T
Q  191 caaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
     |||||| | |||||||||| |||||||| | |||||||||||| |||| ||||||    
T  13266308 gaaaacatgttgaaaagacttgtgttggtttgtggggtcagtcgacaatcctgaaa 13266363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 8467815 - 8467690
Alignment:
Q  102 agaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggt 201  Q
    |||||||||||||||||| |||||||||||||||||||||||     |||||||| ||||||||||| || ||||| || || || |||||||||| | |    
T  8467815 agaactccacagttaagcgtgcttgacttggagcaattttgg-----gtgaccttatgggaagtttctcggaaagcatgcgagtgaggacaaaacacgtt 8467721  T
Q  202 gaaaagactcgtgttggtctatggggtcagt 232  Q
    |||||||||||||||||| | ||||||||||    
T  8467720 gaaaagactcgtgttggtttgtggggtcagt 8467690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 23943254 - 23943097
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| ||||||  | |||||||||||||  ||||||| || || |||||||||    
T  23943254 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgaccaaccgggaagtttcccggtaagcgtgcgagtgaggacaaaac 23943155  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    | | ||||||||||||||||||| | | |||||||||| |||| || ||| |||||||    
T  23943154 acgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctg 23943097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 27578921 - 27578801
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| ||||||||||| ||||| ||||||||| ||||||| ||| ||||||||||||||||||||||  |||||||| || || ||||||| |    
T  27578921 ccataagaactacacagttaagcgtgcttaacttggagcgattttgggatgcgtgaccttctgggaagtttcccagaaagcgtgcgagtgaggacaaatc 27578822  T
Q  197 aaggtgaaaagactcgtgttg 217  Q
    | | |||||||||| ||||||    
T  27578821 atgctgaaaagacttgtgttg 27578801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 219
Target Start/End: Complemental strand, 4127961 - 4127779
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | || |  ||||||||||| || |||||||| |||||| ||| |||||    
T  4127961 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaacttcagagttaagcgtgcttggcttagagca 4127862  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
    ||||||| ||| ||||||| | |  |||||| |||  |||||||||| || |||||||||| | |||||||||||||||||||    
T  4127861 attttgggatgggtgacctaccgaaaagttttccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggt 4127779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 4185847 - 4185943
Alignment:
Q  101 aagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||  |||||||| || ||| |||| ||||||||||||||||| ||||||||||    
T  4185847 aagaactctacagttaagtatgcttgacttggagcaattttgggataggtgaccttatgcgaaatttctcgaaaagcgtgtgaatgaggacaaaaca 4185943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 253
Target Start/End: Original strand, 3169274 - 3169490
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||| |||||||||||||||| |||| ||||||||||||||        |  ||||||| |||||||||||||||| |||||| |||||||||||||| |    
T  3169274 ataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactccacacttaagcgtgcttgacttggagta 3169373  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | || | ||||||||||| |  | |||||||  |  ||||||| || || |||||||||| | |||||| |||||||||||| | | |||||||| |||    
T  3169374 gtctttggatgagtgacctaccagaaagtttcttggtaagcgtgcgagtgaggacaaaacacgttgaaaatactcgtgttggtttgtagggtcagttggc 3169473  T
Q  237 aattctgaaaatcgtct 253  Q
    ||| || ||| ||||||    
T  3169474 aatacttaaagtcgtct 3169490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 27026630 - 27026749
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| |  |||||||| ||||||||||| ||||||||||| | | |||||||||| |||||||| || |||||||||||| || ||| |||||    
T  27026630 ccataagaactacgtagttaagcgtgcttgacttgaagcaattttgggaagggtgaccttctaggaagtttaccaaaaagcgtgtgactgaggaaaaaac 27026729  T
Q  197 aaggtgaaaagactcgtgtt 216  Q
    | | ||||||||||||||||    
T  27026730 acgctgaaaagactcgtgtt 27026749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 50814897 - 50814737
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||  |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  50814897 ataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 50814798  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||||| |||  |||||| | |||||||||||||  || |||| || || ||||||||||    
T  50814797 attttgggatggatgacctaccgggaagtttcccggtaaacgtgcgagtgaggacaaaaca 50814737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 50398610 - 50398401
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |||||||||||||| |||||||| |||||||||||||| |    
T  50398610 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaagcgtgcttgacttggagta 50398511  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | ||   ||| ||||||| | ||||||||| |||  ||||||| || || |||||||| |   || |||||||||||||||| | | ||||||||||||    
T  50398510 ttcttatgatgggtgacctaccgggaagtttaccggtaagcgtgcgagtgaggacaaaatacactggaaagactcgtgttggtttgtagggtcagtcggc 50398411  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  50398410 aatcctgaaa 50398401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 26200283 - 26200205
Alignment:
Q  119 catgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||||||||||||||||||||||| ||| ||||||||| | |||||||| |||||||||||||| || ||||||||||    
T  26200283 catgcttgacttggagcaattttgggatgggtgaccttcagcgaagtttcacgaaaagcgtgtgagtgaggacaaaaca 26200205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 1645821 - 1645619
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||| ||| |||| ||||||||||||||        |  | ||||  ||||||||||||||||||||||| |||||||||||||| |    
T  1645821 ataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgacttggagta 1645722  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | || | ||| ||||||| |  |||||||||     ||||||| || || |||||||||| | ||||||||||||||||||| | | |||||||| |||    
T  1645721 gtctttggatgggtgacctaccaggaagtttctttgtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtagggtcagttggc 1645622  T
Q  237 aat 239  Q
    |||    
T  1645621 aat 1645619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 249
Target Start/End: Complemental strand, 23976291 - 23976078
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncg-acaacccaaaccataagaactccacagttaagcatgcttgacttggagc 135  Q
    ||||||||||||||||||||| ||||| |||||||||||||          | | || ||| ||||| |||||||||||||| | |||||||||||||      
T  23976291 ataagaattgtttggtactacctatactaacaagatgcatcttcttttttcatagccaaaatcataaaaactccacagttaaacgtgcttgacttggaat 23976192  T
Q  136 aattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcgg 235  Q
    |||||||| |||||||| ||| || || ||||||| |||| | || |  || ||| |||||| | ||||||||||  ||||||| |||||||||||||      
T  23976191 aattttgggatgagtgagcttatgtgatgtttcccaaaaaacatgcggctgaggaaaaaacacgctgaaaagactaatgttggtttatggggtcagtcaa 23976092  T
Q  236 caattctgaaaatc 249  Q
    ||||||| ||||||    
T  23976091 caattctaaaaatc 23976078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 11828497 - 11828419
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaa 175  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||| ||| |||||||||||| || |||||| ||||    
T  11828497 ccataagaactccacagttaagcgtgctttacttggagcatttttgggatgggtgaccttctggaaaatttcccaaaaa 11828419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 24628989 - 24628931
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgacct 155  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  24628989 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacct 24628931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 17029458 - 17029531
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttccc 170  Q
    ||||||||||||||||||||||  ||||| |||||||||| ||||||  || ||||||||||||||||||||||    
T  17029458 ccataagaactccacagttaagagtgcttaacttggagcatttttgggttgggtgaccttctgggaagtttccc 17029531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 234
Target Start/End: Original strand, 1464215 - 1464411
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||   |||||||||| |||| || ||| ||||| ||||||||||    
T  1464215 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcacaatttagcgtgcttaacttggagca 1464314  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcg 234  Q
    ||||||| ||| ||||||||||| ||||||| || |||| |||| || |  ||||| |||| | |||||| |||||||||| | | ||||||| ||||    
T  1464315 attttgggatgggtgaccttctgagaagttttccaaaaaacgtgcgagttaggacacaacacgctgaaaa-actcgtgttgatttgtggggtcggtcg 1464411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 17029002 - 17029124
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| || |||||||  |||||||||||||||||||| || ||| || | ||| ||||||||||| ||||||| |||  |||| ||| |||||    
T  17029002 ccataagaacttcatagttaagagtgcttgacttggagcaatttcgggatgggtaaacttatgggaagtttctcgaaaagtgtgctaatgaggagaaaac 17029101  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | ||||||||||  |||||||    
T  17029102 atgttgaaaagacttctgttggt 17029124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 23091521 - 23091444
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaag-tttcccgaaaa 175  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||  || ||||||| |||||||||||    
T  23091521 ataaaaactccacagttaagcatgcttgacttgtagcaattttgggatgggtgatattttgggaagttttcccgaaaa 23091444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 21220403 - 21220271
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  ||| ||  | ||||||||| ||||||||||| || |||||||||||||    
T  21220403 ataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataagaactacacagttaagcgtgtttgacttggagca 21220304  T
Q  137 attttggtatgagtgaccttctgggaagtttccc 170  Q
    ||||||| | | ||||||| || |||||||||||    
T  21220303 attttgggacgggtgacctact-ggaagtttccc 21220271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 14571793 - 14571702
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgac 128  Q
    ||||||||||||||||||||| |||| ||||||||||||||       |   | || |||||||||||||||||||||||||| ||||||||    
T  14571793 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtgcttgac 14571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 15268094 - 15268036
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    |||||||||| | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  15268094 ggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 15268036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 23942801 - 23942679
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | |||  |||||| | || ||||||||  | ||||||| || || |||||||||    
T  23942801 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatggatgacctaccggaaagtttccaaataagcgtgcgagtgaggacaaaac 23942702  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | ||||| ||| |||||||||    
T  23942701 acgttgaaaggacccgtgttggt 23942679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 35477879 - 35477937
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    |||||||||| | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  35477879 ggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 35477937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 43929033 - 43928995
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43929033 aagaattgtttggtactacatataccaacaagatgcatc 43928995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 8467872 - 8467832
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  8467872 ataagaattgtttggtactacctataccaacaagatgcatc 8467832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 31817924 - 31817716
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||||||||||||||||||       ||  |  |||   |||||||||| || |||||||| ||||||||||| || |    
T  31817924 ataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaacttcatagttaagcgtgcttgacttgtagta 31817825  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     |||| | ||| | ||||||| | |||||||| || |||||||| || || ||||||| || | || || ||||||||||||| |  ||| |||||| ||    
T  31817824 gttttaggatgggcgaccttcggtgaagtttcgcggaaagcgtgcgagtgaggacaaatcatgttg-aatgactcgtgttggtttgagggatcagtcagc 31817726  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  31817725 aatcctgaaa 31817716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 50399065 - 50398857
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||| ||||||||       ||  | | ||  ||||||||||||||||||||||| || ||||||||||| |    
T  50399065 ataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttggagta 50398966  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | ||   ||| ||||||| | ||| | || || | ||| ||||  | || |||||||||| | || |||||||||||||||| | | ||||||||||||    
T  50398965 ttcttatgatgggtgacctaccggggaattcccggtaaa-cgtgcaagtgaggacaaaacacgttggaaagactcgtgttggtttgtagggtcagtcggc 50398867  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  50398866 aatcctgaaa 50398857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 41870038 - 41870165
Alignment:
Q  89 aacccaaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggg 188  Q
    |||||||| |||||||||| |||| ||| ||||| ||||| | |||||||||||| |||   |||||||||  ||||||  |||||||||||| |  |      
T  41870038 aacccaaatcataagaacttcacaattatgcatgtttgacatagagcaattttgggatggaagaccttctgaaaagtttttcgaaaagcgtgtaagggat 41870137  T
Q  189 gacaaaacaaggtgaaaagactcgtgtt 216  Q
    |||| |||| | ||||||||||||||||    
T  41870138 gacagaacacgctgaaaagactcgtgtt 41870165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 15306103 - 15306057
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttgg 143  Q
    ||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  15306103 ccataagaactccacagttaagcgtgcttgactttgagcaatcttgg 15306057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 254
Target Start/End: Original strand, 21067418 - 21067567
Alignment:
Q  105 actccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaa 204  Q
    |||||||| |||||| |||||||||||||| | | || | | | ||||||| | || ||||||| ||  ||||||| || |||||||||||||   ||||    
T  21067418 actccacaattaagcgtgcttgacttggagtagtctttggaggggtgacctaccggaaagtttctcggtaagcgtgcgagtggggacaaaacacactgaa 21067517  T
Q  205 aagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    |||||||||||| || | | |||||||||  |||| || ||| |||||||    
T  21067518 aagactcgtgttagtttgttgggtcagtccacaatgcttaaagtcgtctg 21067567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 51331292 - 51331153
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| |||||||||||||| | | ||   ||| ||||||| | ||||| |||  ||| ||||||| ||||| ||||||||||    
T  51331292 cataagaactccacagttaagcgtgcttgacttggagtattcttatgatgggtgacctaccgggaaattt-tcgataagcgtgcgaatgaggacaaaaca 51331194  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
       || |||||||||| || || | | |||||||||||||||    
T  51331193 cactg-aaagactcgtattagtttgtagggtcagtcggcaat 51331153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 4127509 - 4127469
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  4127509 ataagaattgtttggtactacctatatcaacaagatgcatc 4127469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 4185783 - 4185823
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  4185783 ataagaattgtttgataccacatataccaacaagatgcatc 4185823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 23942861 - 23942821
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  23942861 ataagaattgtttggtactacctatatcaacaagatgcatc 23942821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 24629049 - 24629009
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  24629049 ataagaattgtttggtactacctatatcaacaagatgcatc 24629009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 17629090 - 17629140
Alignment:
Q  91 cccaaaccataagaactccacagttaagcatgcttgacttggagcaattttg 142  Q
    ||||| ||| ||||| |||||| |||||||||||||||||||||||||||||    
T  17629090 cccaatccaaaagaattccaca-ttaagcatgcttgacttggagcaattttg 17629140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 20306175 - 20306132
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaatttt 141  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||    
T  20306175 cataagaactacacggttaagcgtgcttgacttggagcaatttt 20306132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 31817098 - 31817003
Alignment:
Q  149 gtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctga 244  Q
    ||||| ||||||||||||||||  |||||||  || || |||||||||| | |||||||||||||| |||| | ||||| || ||| |||| ||||    
T  31817098 gtgacattctgggaagtttcccagaaagcgtacgagtgaggacaaaacatgttgaaaagactcgtgctggtttgtggggccaatcgacaatcctga 31817003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 33764929 - 33764968
Alignment:
Q  38 taagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  33764929 taagaattgtttggtgctacctataccaacaagatgcatc 33764968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 7381459 - 7381537
Alignment:
Q  161 gaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    ||||||| |||  ||||||| || || |||||||||| | ||||||||| ||||||||| | | |||||||||||||||    
T  7381459 gaagttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtagggtcagtcggcaat 7381537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 9423870 - 9423748
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||| | |||| |||||  ||||||| |||||| | | || | ||| ||||||| | ||||| |||||||  |||| || || || |||||||||    
T  9423870 ccataagaatttcacaattaagtgtgcttgaattggagtagtcttaggatgggtgacctaccgggaaatttcccgttaagcatgcgagtgaggacaaaac 9423771  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | |||||||||||||||||||    
T  9423770 acgctgaaaagactcgtgttggt 9423748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 21067859 - 21067981
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| ||||||||||| ||||||||||| || | | || | ||| ||||||| | ||||||||| |||  || |||| || || |||||||||    
T  21067859 ccataagaacttcacagttaagcgtgcttgacttgaagtagtctttggatgggtgacctaccgggaagtttaccggtaaacgtgcgagtgaggacaaaac 21067958  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    |   |||||| | ||||||||||    
T  21067959 acactgaaaaaattcgtgttggt 21067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 29628680 - 29628643
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||||||||||| || |||||||||||    
T  29628680 ccataagaactccacagttaagcgtgtttgacttggag 29628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 50399336 - 50399381
Alignment:
Q  201 tgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    ||||||||||||||||||| | | ||||||||||||||| ||||||    
T  50399336 tgaaaagactcgtgttggtttgtagggtcagtcggcaatcctgaaa 50399381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 53996127 - 53996090
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  53996127 ccataagaactccacagttaagtgtgcttgacttggag 53996090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 7678694 - 7678654
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  7678694 ataagaattgttgggtactacctatatcaacaagatgcatc 7678654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 9423930 - 9423890
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||| |||||||||||||||| |||| ||||||||||||||    
T  9423930 ataataattgtttggtactacctatatcaacaagatgcatc 9423890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 13613908 - 13613788
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaa 198  Q
    ||||||||||||||||||||| || ||||||||||  | | || | ||| ||||| ||||| ||||||| | ||||||| |  || || ||||||| ||     
T  13613908 ataagaactccacagttaagcgtgtttgacttggactagtctttggatgggtgacgttctgagaagttttctgaaaagccttcgagtgaggacaaagcac 13613809  T
Q  199 ggtgaaaagactcgtgttggt 219  Q
    | || |||||||| |||||||    
T  13613808 gctgtaaagactcatgttggt 13613788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 20306233 - 20306193
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  20306233 ataagaattgtttggtactatctatatcaacaagatgcatc 20306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 21067350 - 21067390
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||| |||| |||||||||||||||| ||||||||||||||    
T  21067350 ataataattatttggtactacatatatcaacaagatgcatc 21067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 23091583 - 23091543
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  23091583 ataaaaattgtttggtactacatatattaacaagatgcatc 23091543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 23350355 - 23350315
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||| | |||| ||||||||||||||    
T  23350355 ataagaattgtttggtacttcctatatcaacaagatgcatc 23350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 27026571 - 27026611
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||| |||||| |||| ||||||||||||||    
T  27026571 ataagaattgtttgatactacctatatcaacaagatgcatc 27026611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 27029345 - 27029385
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  27029345 ataagaattatttggtactacttatatcaacaagatgcatc 27029385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 29628739 - 29628703
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatg 73  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  29628739 ataagaattgtttggtactacctatatcaacaagatg 29628703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 31817470 - 31817430
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||| |||||||||||||||| ||||||||||| |||||||    
T  31817470 ataataattgtttggtactacctataccaacaaaatgcatc 31817430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 52048738 - 52048698
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||| |||||| ||||| |||||||||||||    
T  52048738 ataagaattgtttgatactacgtatactaacaagatgcatc 52048698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 105788 - 105997
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| |||||| |||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  105788 ataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 105887  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | | ||||||||| |  ||||||| || || |||||||||| | ||||||||||||||||||| ||| ||||||||||||    
T  105888 attttgggatgtgtgacctaccgagaagtttcctggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttatagggtcagtcggc 105987  T
Q  237 aattctgaaa 246  Q
    ||||||||||    
T  105988 aattctgaaa 105997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 22548627 - 22548418
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |||||| |||||||||||||||| ||||||||||||||||    
T  22548627 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataataactccacagttaagcgtgcttgacttggagca 22548528  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||||||   ||||||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  22548527 attttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 22548428  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  22548427 aatcctgaaa 22548418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 22549073 - 22548864
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |||||| |||||||||||||||| ||||||||||||||||    
T  22549073 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaaactccacagttaagcgtgcttgacttggagca 22548974  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||||||   ||||||| || || ||| |||||| | |||| |||||||||||||| | ||||||||||||||    
T  22548973 attttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggataaaacacgctgaacagactcgtgttggtttgtggggtcagtcggc 22548874  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  22548873 aatcctgaaa 22548864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 41659183 - 41658974
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||| | | ||   |||||||||||||||||||||| || |||||||||||||    
T  41659183 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataagaactccacagttaagcgtgtttgacttggagca 41659084  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||  ||||||| | ||||||||||||   ||| ||| || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  41659083 attttgggataggtgacctaccgggaagtttccctgtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggc 41658984  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  41658983 aatgctgaaa 41658974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 34308953 - 34308804
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||  ||| ||||||| | |||||||||||||  |||| ||||| || |||||||||    
T  34308953 ccataagaactccacagttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaac 34308854  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  34308853 acgctgaaaagactcgtgttggtttgtggggtcagtcagcaatcctgaaa 34308804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 34308557 - 34308348
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||| ||||||||||||| |||| ||||||||||||||       ||  | || |  |||||||||||||||| |||||| |||||| |||||||||    
T  34308557 ataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacacttaagcgtgcttggcttggagca 34308458  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||  ||| ||||||| | |||||||||||||  |||| ||||| || |||||||||| | |||||||||||||| |||| | ||||||||||||||    
T  34308457 attttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctgaaaagactcgtgctggtttgtggggtcagtcggc 34308358  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  34308357 aatcctgaaa 34308348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 17103209 - 17103367
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagt-gaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaa 195  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| ||| || ||||| | |||||||||||||  ||||||| || || ||||||||    
T  17103209 ccataagaactccacggttaagcgtgcttgacttggagcaattttgggatgggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaa 17103308  T
Q  196 caaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    || | ||||||||||||||||||| | |||||||||||| |||| || ||| |||||||    
T  17103309 cacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtcgtctg 17103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 22026447 - 22026657
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  22026447 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 22026546  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggac-aaaacaaggtgaaaagactcgtgttggtctatggggtcagtcgg 235  Q
    || |||| ||| || ||||   |||||||||||||  ||||||| || || |||| ||||||   ||||||||||||||||||| | |||||||||||||    
T  22026547 atattgggatgggtaacctatcgggaagtttcccggtaagcgtgcgagtgaggacaaaaacacactgaaaagactcgtgttggtttgtggggtcagtcgg 22026646  T
Q  236 caattctgaaa 246  Q
    |||| ||||||    
T  22026647 caatcctgaaa 22026657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 25147604 - 25147812
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||||||| |||| |||| ||||||||||||||       ||  | | ||  |||||||||||||| |||||| | ||||||||||||||||    
T  25147604 ataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaatcgtgcttgacttggagca 25147703  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||||| || ||||||| || || | |||||||| | ||||||||||||||||||| | | ||||||||||||    
T  25147704 attttgggatgggtgacctaccgggaagtttcctgataagcgtgcgagtgagtacaaaacacgctgaaaagactcgtgttggtttgt-gggtcagtcggc 25147802  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  25147803 aatcctgaaa 25147812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 12100820 - 12100972
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||    ||||||| || || ||||||||||    
T  12100820 cataagaacttcacagttaagcgtgcttgacttggagcaattttgg-atgggtgacctaccgggaagtttcctcgtaagcgtgcgagtgaggacaaaaca 12100918  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgt 251  Q
     | ||||||||||||||||||| | |||||||||||| |||| |||||| ||||    
T  12100919 cgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagtcgt 12100972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 27022416 - 27022215
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| |||||| |||||||       || || | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  27022416 ataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataagaactccacagttaagcgtgcttgacttggagca 27022317  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| |||| ||||||   |  ||||||| || || |||||||||| | | ||||||||||||||||| | |||||||||||| |    
T  27022316 attttgggatgggtgacctactggaaagttt-ttggtaagcgtgcgagtgaggacaaaacacgctaaaaagactcgtgttggtttgtggggtcagtcgac 27022218  T
Q  237 aat 239  Q
    |||    
T  27022217 aat 27022215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 31283669 - 31283513
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||    
T  31283669 ccataagaactccacagttaagtgtgcttgactttgagcaattttgg-atgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaac 31283571  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
      | ||||||||||||||||||| | |||||||||||| ||||  ||||| |||||||    
T  31283570 gcgttgaaaagactcgtgttggtttgtggggtcagtcgacaatgttgaaagtcgtctg 31283513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 12827332 - 12827123
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  12827332 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 12827233  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||| ||| || || ||  ||||||   | ||||||||||||||||| | |||||||||||| |    
T  12827232 attttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggttaaaacacttttaaaagactcgtgttggtttgtggggtcagtcgac 12827133  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  12827132 aatcctgaaa 12827123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 25148095 - 25148236
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||| | ||||||||| |||| || |||| || || || ||||||    
T  25148095 ccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagttt-ccgataaacgtgcgagtgaggtcaaaac 25148193  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | ||||||||||||||||||| | |||||||||||| ||||    
T  25148194 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 25148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 10844633 - 10844476
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||| | |||||||||| ||  |||| || || || |||||||||    
T  10844633 ccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtgaggacaaaac 10844534  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    | | |||||||||||||||| || | | |||||||||| |||| || ||| |||||||    
T  10844533 acgctgaaaagactcgtgtttgtttgtagggtcagtcgacaatcctaaaagtcgtctg 10844476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 254
Target Start/End: Original strand, 27925967 - 27926183
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||   |||||||||||||||||||||| ||||||||||||||||    
T  27925967 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagca 27926066  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    | ||||| ||| ||||  | | |||||||||||||  ||| ||| || || |||||||||| | ||||||||||||||||||| | | |||||||||| |    
T  27926067 a-tttgggatgggtgaggtaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtagggtcagtcgac 27926165  T
Q  237 aattctgaaaatcgtctg 254  Q
    ||| || ||| |||||||    
T  27926166 aatgcttaaagtcgtctg 27926183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 21316126 - 21315986
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||| | ||||||| | | ||||||| |||  ||||||| || || ||||||||||    
T  21316126 cataagaactccacagttaagtgtgcttgacttggagtaattttggtaagggtgacctaccgcgaagttt-ccggtaagcgtgcgagtgaggacaaaaca 21316028  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
     | ||||||||||||||||||| | |||||||| ||| ||||    
T  21316027 cgctgaaaagactcgtgttggtttgtggggtcaatcgacaat 21315986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 32292525 - 32292647
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| |||| || | ||||||||| |||  |||||||||| || |||||||||    
T  32292525 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgatctaccgggaagttttccggtaagcgtgtgagtgaggacaaaac 32292624  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | |||||||||||||||||||    
T  32292625 acgctgaaaagactcgtgttggt 32292647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 254
Target Start/End: Complemental strand, 8080420 - 8080203
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| |||||||||||||         |  | ||||  ||||||||||| ||||||||||| |||||||||||||| |    
T  8080420 ataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaacttcacagttaagcgtgcttgacttggagta 8080321  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | || | ||| || |||| || ||||||||| ||  ||||||| || || |||||||||| | ||||||||||||||||||| | | ||| |||||| |    
T  8080320 gtctttggatgggtaacctactaggaagtttctcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggccagtcgac 8080221  T
Q  237 aattctgaaaatcgtctg 254  Q
    ||| || ||| |||||||    
T  8080220 aatgcttaaagtcgtctg 8080203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 32292093 - 32292218
Alignment:
Q  121 tgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtc 220  Q
    |||||||||||||| | | || | ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | |||||||||||||||||||     
T  32292093 tgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtt 32292192  T
Q  221 tatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||| ||||||    
T  32292193 tgtagggtcagtcggcaatcctgaaa 32292218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 2044186 - 2044322
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||| |||||||||||||||| |||||||||||||| | | || | ||| |||||||  |||||||||| |||  ||||||| || || |||||||||    
T  2044186 ccataataactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaatgggaagttttccggtaagcgtgcgagtgaggacaaaac 2044285  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtc 233  Q
    | | ||||||||||||| ||||| | | |||||||||    
T  2044286 acgctgaaaagactcgtattggtttgtagggtcagtc 2044322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 3745229 - 3745349
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||| ||||||||||| |||| |||||||||| |||||||||||| |||  ||||| |||| |||||||| | |||||||||||||||   | |||||    
T  3745229 ccataataactccacagtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaac 3745328  T
Q  197 aaggtgaaaagactcgtgttg 217  Q
    | | ||||||||||| |||||    
T  3745329 atgctgaaaagactcatgttg 3745349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 25144840 - 25144957
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| || |||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  25144840 ataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 25144939  T
Q  137 attttggtatgagtgacc 154  Q
    ||||||| ||| ||||||    
T  25144940 attttgggatgggtgacc 25144957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 254
Target Start/End: Complemental strand, 15819088 - 15818877
Alignment:
Q  42 aattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaatttt 141  Q
    ||||||||||||||||||||| ||||| ||||||||       ||  | | ||  |||||||||||| ||||||||   |||||||||||||| |   ||    
T  15819088 aattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaactc-acagttaaatttgcttgacttggagtaggctt 15818990  T
Q  142 ggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattc 241  Q
     | ||| | |||||||||||||||||||||||||| ||| || || ||||||| ||   |||||||||| |||||||| | ||||| ||||||||||| |    
T  15818989 tggatgggcgaccttctgggaagtttcccgaaaagtgtgcgagtgaggacaaagcacactgaaaagacttgtgttggtttgtggggccagtcggcaatac 15818890  T
Q  242 tgaaaatcgtctg 254  Q
    | ||| |||||||    
T  15818889 ttaaagtcgtctg 15818877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 254
Target Start/End: Complemental strand, 15568025 - 15567870
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaa 198  Q
    |||||||||||||| |||||| | |||||||  |||||||||||| ||| ||||  |||| ||||||||| || |||  ||| || || ||||||||||     
T  15568025 ataagaactccacaattaagcgtacttgactcagagcaattttgggatgggtgaatttctaggaagtttctcggaaaatgtgagagtgaggacaaaacac 15567926  T
Q  199 ggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    | | ||||||| |||||| || | ||||| ||||||||||| || ||| |||||||    
T  15567925 gttaaaaagacccgtgttagtatgtggggccagtcggcaatacttaaagtcgtctg 15567870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 6466408 - 6466541
Alignment:
Q  121 tgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtc 220  Q
    ||||||||||| ||||||||||  || |||| |||| ||||||||||| | |||||| |  || || ||||||| || | | |||||||| ||||||||     
T  6466408 tgcttgacttgaagcaattttgagataagtggccttttgggaagtttctcaaaaagcatacgagtgaggacaaagcacgctaaaaagacttgtgttggtt 6466507  T
Q  221 tatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    | ||||| ||||||||||| |||||| |||||||    
T  6466508 tgtggggccagtcggcaatactgaaagtcgtctg 6466541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 41913098 - 41913240
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||| ||||||||| ||||||||||| || | | || | ||||||||||| || | |||||||  |  |||||||  | || |||||||||    
T  41913098 ccataagaactccgcagttaagcgtgcttgacttgaagtagtctttggatgagtgacctactagaaagtttcttggtaagcgtgcaagtgaggacaaaac 41913197  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | |||||| ||||||||| || ||| |||||||||| ||||    
T  41913198 acgttgaaaaaactcgtgttagtttatagggtcagtcgacaat 41913240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 6466835 - 6466904
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagttt 167  Q
    |||||||||| || | |||||  | ||||||||||||||||||||||||| |||||||||| ||||||||    
T  6466835 cataagaactacaaatttaagtgtacttgacttggagcaattttggtatgggtgaccttcttggaagttt 6466904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 10729704 - 10729604
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||| |||||||| |||||  |||||| |||| ||||||||||| |||| ||||||| ||| |||||||  |||||||||| || ||  ||||||||    
T  10729704 ccataaggactccacaattaagggtgcttggcttgaagcaattttgggatgactgaccttatggaaagtttcatgaaaagcgtgcgagtgaagacaaaac 10729605  T
Q  197 a 197  Q
    |    
T  10729604 a 10729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 10844951 - 10845043
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgact 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| |||||||||    
T  10844951 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 25307895 - 25308034
Alignment:
Q  100 taagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaag 199  Q
    |||||||||||||||||||| |||||||||||| | | | || | ||| ||||| | || | ||||||  ||  ||||||| || || |||||||  | |    
T  25307895 taagaactccacagttaagcttgcttgacttggtgtagtctttggatgggtgacgtacttgaaagtttttcggcaagcgtgcgagtgaggacaaagtacg 25307994  T
Q  200 gtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
     ||||||||||||||||| | |||||| ||||||||||||    
T  25307995 ctgaaaagactcgtgttgatttatgggatcagtcggcaat 25308034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 6466778 - 6466818
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  6466778 ataaaaattgtttggtactacctataccaacaagatgcatc 6466818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 22705240 - 22705280
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  22705240 ataagaattgtttggtactacctatatcaacaagatgcatc 22705280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 27021957 - 27021917
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  27021957 ataagaattgtttggtactacttatatcaacaagatgcatc 27021917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 1297075 - 1297110
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagat 72  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1297075 ataagaattgtttggtactacctataccaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 6464988 - 6464949
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcat 76  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  6464988 ataagaattgtttggtactacctatatcaacaagatgcat 6464949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 28453466 - 28453585
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||| |||||||||| |||||||||||||| | | || | |||  |||||| || ||||||||||  | |||  || || || |||||||||    
T  28453466 ccataagaactctacagttaagcgtgcttgacttggagtagtctttggatggatgacctactcggaagtttcctaataagactgcgagtgaggacaaaac 28453565  T
Q  197 aaggtgaaaagactcgtgtt 216  Q
    | | |||||||| |||||||    
T  28453566 atgctgaaaagagtcgtgtt 28453585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 21316185 - 21316147
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  21316185 aagaattgtttggtactacctatatcaacaagatgcatc 21316147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 6464928 - 6464891
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggag 134  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  6464928 ccataacaactccacagttaagcgtgcttgacttggag 6464891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 6466329 - 6466365
Alignment:
Q  41 gaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  6466329 gaattgtttggtactacttataccaacaagttgcatc 6466365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 15567634 - 15567594
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||  |||||||||||||||||||| ||||    
T  15567634 ataagaattgtttgacactacatataccaacaagatacatc 15567594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 22840607 - 22840567
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  22840607 ataagaattgtttggtactatctatatcaacaagatgcatc 22840567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 27819324 - 27819284
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| |||||| |||||||    
T  27819324 ataagaattgtttggtactacctatatcaacaaaatgcatc 27819284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 28375132 - 28375092
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| || | ||||||||||||||    
T  28375132 ataagaattgtttggtactacctacatcaacaagatgcatc 28375092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 33852276 - 33852156
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||| |||| |||||| |||||||||||||| | | || | ||| |||||||   || |||||||  || ||||||| || || |||||||||    
T  33852276 ccataagaacttcacaattaagcgtgcttgacttggagtagtctttggatgggtgacctatcggaaagtttcatgataagcgtgcgagtgaggacaaaac 33852177  T
Q  197 aaggtgaaaagactcgtgttg 217  Q
    | | | ||||||||| |||||    
T  33852176 acgctaaaaagactcatgttg 33852156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 6e-43; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 33771069 - 33771278
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||   |||||||||||||||||||||||||||||||||||||||    
T  33771069 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcatgcttgacttggagca 33771168  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  |||| || || || ||||||||||   ||||||||||||||||||| | ||||||||| ||||    
T  33771169 attttgggatgggtgacctaccgggaagtttcccggtaagcatgcgagtgaggacaaaacacactgaaaagactcgtgttggtttgtggggtcagccggc 33771268  T
Q  237 aattctgaaa 246  Q
    ||||||||||    
T  33771269 aattctgaaa 33771278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 25338075 - 25337866
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||| | | ||   |||||||||||||||||||||| ||||||||||||||||    
T  25338075 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgcttgacttggagca 25337976  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||| ||| || || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  25337975 attttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgac 25337876  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  25337875 aatgctgaaa 25337866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 30966758 - 30966967
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||| ||||||||||    
T  30966758 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttaacttggagca 30966857  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||| ||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||| ||||||||||    
T  30966858 attttgggatgggtgacctaccgggaagtttctcggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggagtcagtcggc 30966957  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  30966958 aatcctgaaa 30966967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 24818394 - 24818602
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||| ||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  24818394 ataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 24818493  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||||| |  ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  24818494 attttgg-atgggtgacctaccgggaagtttcctggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgac 24818592  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  24818593 aatgctgaaa 24818602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 30966302 - 30966511
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  |||||||||||||| |||||||| ||||||||||||| ||    
T  30966302 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaagcgtgcttgacttggacca 30966401  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||| ||  |||| || || || |||||||||| | ||||||||||||||||||| | ||||||||||||||    
T  30966402 attttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagtcggc 30966501  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  30966502 aatcctgaaa 30966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 30963341 - 30963139
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||        |  | |||||| |||||||| || |||||||||| ||||||||||||||||    
T  30963341 ataagaattgttaggtactacctatatcaacaagatgcatcttatttttggtagcccaaatcataagaattcaacagttaagcgtgcttgacttggagca 30963242  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| |||||||||||||| ||||||||| || |||||||| || || ||| |||| | | ||||||||||||||||||| | || ||||| |||||    
T  30963241 attttgggatgagtgaccttcttggaagtttctcggaaagcgtgcgagtgaggataaaatacgttgaaaagactcgtgttggtttgtgaggtcaatcggc 30963142  T
Q  237 aat 239  Q
    |||    
T  30963141 aat 30963139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 32377921 - 32377776
Alignment:
Q  101 aagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaagg 200  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||| |||| || ||||||||||| |||  ||||||| || || |||||||||| |     
T  32377921 aagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgatctactgggaagttttccggtaagcgtgcgagtgaggacaaaacacgc 32377822  T
Q  201 tgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  32377821 tgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 32377776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 219
Target Start/End: Original strand, 8256594 - 8256776
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  8256594 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 8256693  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
    ||||||| ||| ||||||| ||||||||||| |||| ||||||| || || |||||||| | | ||||||||||| |||||||    
T  8256694 attttgggatgggtgacctgctgggaagttttccgataagcgtgcgagtgaggacaaaatacgctgaaaagactcatgttggt 8256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 239
Target Start/End: Complemental strand, 32377730 - 32377592
Alignment:
Q  101 aagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaagg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| | || |||||| |||  ||||||| || || |||||||||| |     
T  32377730 aagaactccacagttaagcatgcttgacttggagcaattttgggataggtgacctaccggaaagttttccggtaagcgtgcgagtgaggacaaaacacgc 32377631  T
Q  201 tgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    |||||| |||||||||||| | |||||||||||||||||    
T  32377630 tgaaaaaactcgtgttggtttgtggggtcagtcggcaat 32377592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 30961904 - 30961759
Alignment:
Q  94 aaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaa 193  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||| ||| ||||||||||||| |||||| |  |||||||| || || ||||||    
T  30961904 aaaccataagaactccacagttaaacgtgcttgacttagagcaattttgggatgggtgaccttctgggtagtttctcagaaagcgtgcgagtgaggacaa 30961805  T
Q  194 aacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    ||||  ||||||||||| ||||| || | |||||||| ||||||||    
T  30961804 aacacagtgaaaagacttgtgttagtttgtggggtcaatcggcaat 30961759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 239
Target Start/End: Original strand, 13191042 - 13191244
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||||||||||||||||||||||||||||||||        |  |  |||    |||||||||||| ||||| |  ||||||||||| || |    
T  13191042 ataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactccatagttatgtgtgcttgacttgaagaa 13191141  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||  ||  |||||||||||| ||||||| | ||||||||||||||| |||||||||| | | |||||||| |||||||| ||||| |||||||| |    
T  13191142 attttgagataggtgaccttctggaaagtttctcaaaaagcgtgtgaatgcggacaaaacacgctaaaaagactagtgttggtttatggagtcagtcgac 13191241  T
Q  237 aat 239  Q
    |||    
T  13191242 aat 13191244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 254
Target Start/End: Original strand, 15639854 - 15640019
Alignment:
Q  89 aacccaaaccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggg 188  Q
    ||||||| ||| |||||||||||| |||||| |||||||||||||| | | || | ||| ||||||| |||||||||||| ||| ||||||| || || |    
T  15639854 aacccaatccacaagaactccacaattaagcgtgcttgacttggagtagtctttggatgggtgacctactgggaagtttctcgataagcgtgcgagtgag 15639953  T
Q  189 gacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    ||||||||| |  ||||||||||||||||||   | ||||||||||||||| || ||| |||||||    
T  15639954 gacaaaacacgcagaaaagactcgtgttggttggtagggtcagtcggcaatgcttaaagtcgtctg 15640019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 219
Target Start/End: Complemental strand, 29259693 - 29259516
Alignment:
Q  42 aattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaatttt 141  Q
    ||||||||||||||||||||| ||||||||||||||       ||  | | ||   |||||||||| || |||||||| |||||||||| ||||||||||    
T  29259693 aattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcatagttaagcgtgcttgactttgagcaatttt 29259594  T
Q  142 ggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
    || ||| ||||||| | |||||||||||||  |||| || || || |||||||||| | |||||||||||||||||||    
T  29259593 gggatgggtgacctaccgggaagtttcccggtaagcatgcgagtgaggacaaaacacgttgaaaagactcgtgttggt 29259516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 237
Target Start/End: Complemental strand, 30963798 - 30963598
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||| |||| |||| |||| ||||||||||||||        |  | |||||||||||| |||||||||||||||| |||||||||||| | |    
T  30963798 ataagaattgtatggttctacctatatcaacaagatgcatcttctttctggtagcccaaaccataataactccacagttaagcgtgcttgacttggcgga 30963699  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     |||||| ||  |||||||||| ||||||||  || ||| |||| || || ||||||||||  |||||||||||||| ||||| | |||| |||||||||    
T  30963698 gttttgggataggtgaccttctaggaagtttgtcggaaaccgtgcgagtgaggacaaaacacagtgaaaagactcgttttggtttgtgggatcagtcggc 30963599  T
Q  237 a 237  Q
    |    
T  30963598 a 30963598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 5399895 - 5399693
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||| || |||||||| |||||||||||||| |    
T  5399895 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaagcgtgcttgacttggagaa 5399796  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| |  |||||||| |||  ||||||| || || | |||||||| | || ||||||| |||||||| | |||||||||||| |    
T  5399795 attttgggatgggtgacctaccaggaagttttccggtaagcgtgcgagtgagaacaaaacacgctggaaagacttgtgttggtttgtggggtcagtcgac 5399696  T
Q  237 aat 239  Q
    |||    
T  5399695 aat 5399693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 219
Target Start/End: Original strand, 15619966 - 15620148
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||| ||||        |  ||||||| |||||||||||||||| |||||| |||||||||| ||| |    
T  15619966 ataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaactccacaattaagcgtgcttgactttgagta 15620065  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
     | || | ||| ||||||| |||||||||||| ||  ||||||| || || |||||||||  | |||||||||||||||||||    
T  15620066 gtctttggatgggtgacctactgggaagtttctcggtaagcgtgcgagtgaggacaaaactcgctgaaaagactcgtgttggt 15620148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 254
Target Start/End: Original strand, 1912593 - 1912809
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  | ||||  ||||||||||||||||||||||| || ||||||||||| |    
T  1912593 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttggt-agcccattccataagaactccacagttaagcgtgattgacttggagta 1912691  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | || | ||| || |||| | |||||||||| ||  ||||||| || || |||||||||| | ||||||||||||||||||| | | | ||||||||||    
T  1912692 ctctttggatgggttacctaccgggaagtttctcggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtagagtcagtcggc 1912791  T
Q  237 aattctgaaaatcgtctg 254  Q
    ||| || ||| |||||||    
T  1912792 aatgcttaaagtcgtctg 1912809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 16379065 - 16379207
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| |||||||   ||||||||||| |  ||||||| || || |||||||||    
T  16379065 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcgggaagtttccgggtaagcgtgcgagtgaggacaaaac 16379164  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | ||||||||||||||||||| | | |||||||||| ||||    
T  16379165 acgctgaaaagactcgtgttggtttgtagggtcagtcgacaat 16379207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 11388260 - 11388386
Alignment:
Q  42 aattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagcaatttt 141  Q
    |||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  11388260 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaatttt 11388359  T
Q  142 ggtatgagtgaccttctgggaagtttc 168  Q
    || ||| ||||||| || |||||||||    
T  11388360 gggatgggtgacctactaggaagtttc 11388386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 37 - 197
Target Start/End: Original strand, 41754357 - 41754517
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||  |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  41754357 ataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 41754456  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||||| |||  |||||| | || ||||||||||  || |||| || || ||||||||||    
T  41754457 attttgggatggatgacctaccggaaagtttcccggtaaacgtgcgagtgaggacaaaaca 41754517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 16379521 - 16379643
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| || ||||||||||| ||| || | ||| ||||||| | |||||||||| |   ||||||| || || |||||||||    
T  16379521 ccataagaactccacagttaagcgtgtttgacttggagtaatctttggatgggtgacctaccgggaagtttcactgtaagcgtgcgagtgaggacaaaac 16379620  T
Q  197 aaggtgaaaagactcgtgttggt 219  Q
    | | |||||||||||||||||||    
T  16379621 acgctgaaaagactcgtgttggt 16379643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 11394661 - 11394732
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttc 168  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||| || |||||||||    
T  11394661 ccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactaggaagtttc 11394732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 25434074 - 25433932
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||   | || | ||| ||||||  | ||||||||| | |  |||||||||| |  |||||||||    
T  25434074 ccataagaactccacagttaagcgtgcttgacttggagtggtctttggatgggtgaccaacagggaagttttctggtaagcgtgtgagtaaggacaaaac 25433975  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | |||||||| |||||||||| | | |||||||||||||||    
T  25433974 acgctgaaaagattcgtgttggtttgtagggtcagtcggcaat 25433932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 239
Target Start/End: Original strand, 8073960 - 8074162
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||||||||||||||||||           | ||||   ||||||||||||| || ||||| | ||||||||||   |    
T  8073960 ataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactccatagataagccttcttgacttggttaa 8074059  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| |||||||||||||  | ||||||| ||||||| |||||| || | |||||||| | |||||| ||| ||||| || | |||| ||||||| |    
T  8074060 attttgggatgagtgaccttccagaaagtttctcgaaaagtgtgtgattgagaacaaaacacgatgaaaaaacttgtgtttgtttgtgggatcagtcgac 8074159  T
Q  237 aat 239  Q
    |||    
T  8074160 aat 8074162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 29804750 - 29804856
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||| ||||    
T  29804750 ataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagca 29804849  T
Q  137 attttgg 143  Q
    |||||||    
T  29804850 attttgg 29804856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 33174571 - 33174668
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | ||||  ||||||||||||| ||||||||| ||||||||||||||    
T  33174571 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtgcttgacttggag 33174668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 254
Target Start/End: Original strand, 1707109 - 1707326
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  | ||||   |||||||||||||||||||||  || |||||||| || |    
T  1707109 ataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataagaactccacagttaagagtgtttgacttgaagta 1707208  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | || | ||| ||||||| |  ||||||||||||  ||||||| || ||   |||||||| | | |||||| ||| |||| | ||| ||||||||||||    
T  1707209 gtctttggatgggtgacctaccaggaagtttcccggtaagcgtgcgagtgaatacaaaacacgctaaaaagattcgcgttgatttatagggtcagtcggc 1707308  T
Q  237 aattctgaaaatcgtctg 254  Q
    ||| || ||| |||||||    
T  1707309 aatgcttaaagtcgtctg 1707326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 33175026 - 33175233
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||        |  | | ||   |||||||||||||||||||||| || ||||||||||| |    
T  33175026 ataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgtg-ttgacttggagta 33175124  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
     | ||   ||| ||||||| | |||||  ||||||  ||||||| || || |||||||||| | || ||||||||||||| || | | ||||||||||||    
T  33175125 ttcttatgatgggtgacctaccgggaa-attcccggtaagcgtgcgagtgaggacaaaacacgctggaaagactcgtgttagtttgtagggtcagtcggc 33175223  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  33175224 aatcctgaaa 33175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 18098956 - 18098916
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  18098956 ataagaattgtttggtactacctatatcaacaagatgcatc 18098916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 38898990 - 38898951
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcat 76  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  38898990 ataagaattgtttggtactacctatatcaacaagatgcat 38898951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 8181327 - 8181257
Alignment:
Q  149 gtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggt 219  Q
    ||||||| ||||||||||| |||| || ||||  | || |||||||||| | |||||||||||||||||||    
T  8181327 gtgacctactgggaagttttccgataaacgtgcaagtgaggacaaaacacgctgaaaagactcgtgttggt 8181257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 37552696 - 37552830
Alignment:
Q  100 taagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaag 199  Q
    |||||| ||||||||||||||||||||||||  | ||||| ||| | | |  ||||||||  |||||||||||||| | || || || ||| |||||| |    
T  37552696 taagaattccacagttaagcatgcttgactttaatcaattctgggacgggaaaccttctgaaaagtttcccgaaaatcatgcgattgaggaaaaaacacg 37552795  T
Q  200 gtgaaaagactcgtgttggtctatggggtcagtcg 234  Q
     | |||| || ||||||||| | | ||||||||||    
T  37552796 cttaaaatacccgtgttggtttgtagggtcagtcg 37552830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 18875979 - 18875866
Alignment:
Q  121 tgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtc 220  Q
    ||||||| || |||||||||||| ||| |||| ||||||  |||||||  ||||| |||| || || ||||||||||   || |||||| |||||||||     
T  18875979 tgcttgattttgagcaattttgggatgggtgatcttctgaaaagtttcttgaaaatcgtgcgagtgaggacaaaacacactgtaaagacacgtgttggtt 18875880  T
Q  221 tatggggtcagtcg 234  Q
    | ||||| ||||||    
T  18875879 tgtggggacagtcg 18875866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 83085 - 83121
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatg 73  Q
    |||||||| |||||||||||| |||||||||||||||    
T  83085 ataagaatcgtttggtactacctataccaacaagatg 83121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 1953223 - 1953263
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| |||| |||||||||    
T  1953223 ataagaattgtttggtactacctatatcaactagatgcatc 1953263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 16379465 - 16379501
Alignment:
Q  41 gaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  16379465 gaattgtttggtactacctatatcaacaagatgcatc 16379501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 18447996 - 18447956
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| | || ||||||||||||||    
T  18447996 ataagaattgtttggtactacttgtatcaacaagatgcatc 18447956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 20502183 - 20502235
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaatt 240  Q
    |||||||||| | |||||||||||||||| || | | ||||||||||||||||    
T  20502183 ggacaaaacacgctgaaaagactcgtgttagtttgtagggtcagtcggcaatt 20502235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 38898929 - 38898897
Alignment:
Q  98 cataagaactccacagttaagcatgcttgactt 130  Q
    |||||||||||||||||||||| ||||||||||    
T  38898929 cataagaactccacagttaagcgtgcttgactt 38898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 2129 - 1927
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  2129 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 2030  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||| | | ||||||||||||||||||| | |||||||||||| |    
T  2029 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaatacgctgaaaagactcgtgttggtttgtggggtcagtcgac 1930  T
Q  237 aat 239  Q
    |||    
T  1929 aat 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 107481 - 107332
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| | | |||||||||||||  ||||||| || || |||||||||    
T  107481 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacgtaccgggaagtttcccggtaagcgtgcgagtgaggacaaaac 107382  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||||||||||| |||||||||    
T  107381 atgctgaaaagactcgtgttggtttgtggggtcagtcggctattctgaaa 107332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 1288 - 1497
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| ||||  |||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  1288 ataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 1387  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | |||||||||||||  ||||||| || || |||||||||| | ||||||||||||||||||| | ||| |||||||| |    
T  1388 attttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggcgtcagtcgac 1487  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  1488 aatcctgaaa 1497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 10368 - 10576
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||| ||||||| |||| ||||||||||||||       ||  | | ||  ||||||||||||||||||||||| ||||||||||||||||    
T  10368 ataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagca 10467  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||||| |  ||||||| || || |||||||||| | ||||||||||||||||||| | |||||||||||| |    
T  10468 attttgg-atgggtgacctaccgggaagtttcctggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgac 10566  T
Q  237 aattctgaaa 246  Q
    ||| ||||||    
T  10567 aatgctgaaa 10576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 14720 - 14571
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||  ||| ||| || || |||||||||    
T  14720 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaac 14621  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||| || |||| ||||||    
T  14620 atgctgaaaagactcgtgttggtttgtggggtcagccgacaatgctgaaa 14571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 2870 - 3019
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||| | |||||||||||||  ||| ||| || || |||||||||    
T  2870 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggagacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaac 2969  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||| | | ||||||||||||||||| ||||||    
T  2970 acgctgaaaagactcgtgttgatttgtggggtcagtcggcaatgctgaaa 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 162756 - 162546
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| ||||  |||||||||||||       ||  | | ||  ||||||||||||| ||||||||| ||||||||||||||||    
T  162756 ataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccgcagttaagcgtgcttgacttggagca 162657  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtg-aaaagactcgtgttggtctatggggtcagtcgg 235  Q
    | ||||| ||||||||||| |  ||||||||| ||| ||||||| || || |||||||||| | || ||||||||||||||||| | |||||||||||||    
T  162656 actttgggatgagtgacctacctggaagtttcgcgataagcgtgcgagtgaggacaaaacacgctgaaaaagactcgtgttggtttgtggggtcagtcgg 162557  T
Q  236 caattctgaaa 246  Q
    |||| ||||||    
T  162556 caatcctgaaa 162546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 247
Target Start/End: Complemental strand, 163152 - 163002
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   |||||||||| ||  ||||||  || || |||||||||    
T  163152 ccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcgggaagtttctcggtaagcgttcgagtgaggacaaaac 163053  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaa 247  Q
    | | ||||||||||||||||||| | ||||| ||||||||||| |||||||    
T  163052 acgctgaaaagactcgtgttggtttgtggggccagtcggcaatcctgaaaa 163002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 163202 - 163356
Alignment:
Q  100 taagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaag 199  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||| | | ||||||||||   ||||||| || || |||||||||| |    
T  163202 taagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttcccagtaagcgtgcgagtgaggacaaaacacg 163301  T
Q  200 gtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
     ||||||||||||||||||| | | ||||| |||| |||| |||||| |||||||    
T  163302 ctgaaaagactcgtgttggtttgtagggtctgtcgacaatcctgaaagtcgtctg 163356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 69833 - 69684
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||||||||||||||||| ||  |||||||| |||| | | || | ||| ||||||||| |||||||||   | ||||||||||| ||  |||||| |    
T  69833 ccataagaactccacagttatgcgggcttgactaggagtagtctttggatgggtgaccttcagggaagtttatgggaaagcgtgtgagtgatgacaaacc 69734  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | | ||||||||||||||||| | | || |||||||||||| ||||||    
T  69733 acgctaaaaagactcgtgttggtttgttggttcagtcggcaatcctgaaa 69684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 438 - 580
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    |||||| | ||||| |||||||| |||||||| |||||||||||||| ||| ||||||| | |||||||||||||| |||| ||||| || |||||||||    
T  438 ccataaaatctccatagttaagcgtgcttgacatggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgtgagtgaggacaaaac 537  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | | ||||||||||||||||||| | |||||||||||||||||    
T  538 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 13551 - 13402
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||| | ||||||||||     ||||||| || || |||||||||    
T  13551 ccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttctttgtaagcgtgcgagtgaggacaaaac 13452  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  13451 acgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 13402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 154885 - 155034
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||| ||  ||| |||  | || |||||||||    
T  154885 ccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgctagtgaggacaaaac 154984  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    | | ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  154985 acgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 155034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 154521 - 154579
Alignment:
Q  188 ggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaa 246  Q
    |||||||||| | ||||||||||||||||| | | |||||||||||| |||| ||||||    
T  154521 ggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatgctgaaa 154579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 2288 - 2086
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatcnnnnnnncgacaacccaaaccataagaactccacagttaagcatgcttgacttggagca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||       ||  | |  |  |||||||||||| | |||||||| ||||||||||||||||    
T  2288 ataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactcaatagttaagcgtgcttgacttggagca 2189  T
Q  137 attttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggc 236  Q
    ||||||| ||| ||||||| | ||||||||| |||  ||||||| || || ||||||||||   ||||||||||||||||||| | |||||||||||| |    
T  2188 attttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaaaacacattgaaaagactcgtgttggtttgtggggtcagtcgac 2089  T
Q  237 aat 239  Q
    |||    
T  2088 aat 2086  T

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Target: scaffold1519 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 1706 - 1582
Alignment:
Q  110 acagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaaggtgaaaagac 209  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||  |||| ||||| || |||||||||| | | |||||||    
T  1706 acagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctaaaaagac 1607  T
Q  210 tcgtgttggtctatggggtcagtcg 234  Q
    |||||||||| | ||||||||||||    
T  1606 tcgtgttggtttgtggggtcagtcg 1582  T

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Target: scaffold0047 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 254
Target Start/End: Complemental strand, 17615 - 17459
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| |||||||||||||| | | || | ||| ||||||| || | ||||||  ||  ||||||| || || ||||||||||    
T  17615 cataagaactccacagttaagcgtgcttgacttggagtactctttggatgggtgacctactcgaaagtttttcggtaagcgtgcgagtgaggacaaaaca 17516  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
     | |||||||||||||||||||  || ||||||||||||||| || |||||||||||    
T  17515 cgctgaaaagactcgtgttggttcatagggtcagtcggcaatacttaaaatcgtctg 17459  T

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Target: scaffold0047; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 18153 - 17996
Alignment:
Q  97 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaac 196  Q
    ||||||||||||||||||||||| |||||||||||||| | | || | ||| |||||||  ||| ||||||  ||  || |||| || || ||||| |||    
T  18153 ccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctattggaaagtttttcggtaaacgtgcgagtgaggacacaac 18054  T
Q  197 aaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
    | | ||||||||||||||||| | | | |||||| ||| |||| || ||| |||||||    
T  18053 acgctgaaaagactcgtgttgatttgtagggtcaatcgacaatgcttaaagtcgtctg 17996  T

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Target: scaffold0047; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 18212 - 18172
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    |||||||||||||| |||||| |||| ||||||||||||||    
T  18212 ataagaattgtttgatactacctatatcaacaagatgcatc 18172  T

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Target: scaffold0333 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 4691 - 4830
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaacaa 198  Q
    ||||||||||||||||||||  ||||| |||||||||||||| || ||| ||||||| | |||||||||||||  ||| ||| || || ||||||||||     
T  4691 ataagaactccacagttaagtgtgcttaacttggagcaatttggg-atgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacac 4789  T
Q  199 ggtgaaaagactcgtgttggtctatggggtcagtcggcaat 239  Q
    | ||||||||||||||||||| | | |||||||||| ||||    
T  4790 gctgaaaagactcgtgttggtttgtagggtcagtcgacaat 4830  T

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Target: scaffold0333; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 5150 - 5305
Alignment:
Q  98 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||| ||| ||||||| |  |||| |||||||  ||| ||| || || ||||||||||    
T  5150 cataagaactccacagttaagcgtgcttaacttggagcaa-tttgggatgggtgacctacctggaaatttcccggtaagtgtgcgagtgaggacaaaaca 5248  T
Q  198 aggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctg 254  Q
     | ||||||||||||||||||| | | |||||||||| |||| || ||| |||||||    
T  5249 cgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctg 5305  T

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Target: scaffold0333; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 4631 - 4669
Alignment:
Q  39 aagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  4631 aagaattgtttggtactacctatatcaacaagatgcatc 4669  T

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Target: scaffold0071 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 44740 - 44660
Alignment:
Q  96 accataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaag 176  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||    
T  44740 accattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaag 44660  T

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Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 23741 - 23781
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  23741 ataagaattgtttggtactacctatatcaacaagatgcatc 23781  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 142352 - 142312
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  142352 ataagaattgtttggtactacctatatcaacaagatgcatc 142312  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 63030 - 62967
Alignment:
Q  192 aaaacaaggtgaaaagactcgtgttggtctatggggtcagtcggcaattctgaaaatcgtctgt 255  Q
    |||||| | ||||||||||||| ||||| | ||||||||||||||||| |||||| | ||||||    
T  63030 aaaacacgctgaaaagactcgtattggtttgtggggtcagtcggcaatcctgaaagtagtctgt 62967  T

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Target: scaffold0557 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 2236 - 2270
Alignment:
Q  100 taagaactccacagttaagcatgcttgacttggag 134  Q
    ||||||||||||||||||||||||||||| |||||    
T  2236 taagaactccacagttaagcatgcttgacatggag 2270  T

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Target: scaffold0391 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 14871 - 14969
Alignment:
Q  99 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgagtgaccttctgggaagtttcccgaaaagcgtgtgaatggggacaaaaca 197  Q
    ||||||||| |||||||||||||| |||||||||||   | || | ||| |||||| | |||||||||| ||||||| |||| || ||  |||||||||    
T  14871 ataagaacttcacagttaagcatgtttgacttggagtggtctttggatgggtgaccatatgggaagttttccgaaaaacgtgcgagtgatgacaaaaca 14969  T

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Target: scaffold0664 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 4060 - 4020
Alignment:
Q  37 ataagaattgtttggtactacatataccaacaagatgcatc 77  Q
    ||||||||||||||||||||| | || ||||||||||||||    
T  4060 ataagaattgtttggtactacctgtatcaacaagatgcatc 4020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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