View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20764_low_72 (Length: 252)
Name: NF20764_low_72
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20764_low_72 |
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Alignment Details
Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 34381849 - 34381966
Alignment:
| Q |
14 |
atataattcaagacgacnnnnnnntactatatgccaaatacccacacaaaaagtccagacaatagggattaggccgccgcaaagctcatgatgacataca |
113 |
Q |
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| T |
34381849 |
atataattcaagacgacaaaaaaatactatatgccaaatacccacacaaaaagtccacacaatagggattaggccgccgcaaagctcatgatgacataca |
34381948 |
T |
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| Q |
114 |
aataaccctatcacaggt |
131 |
Q |
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||||||||||||||||| |
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| T |
34381949 |
cataaccctatcacaggt |
34381966 |
T |
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