View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20764_low_80 (Length: 247)
Name: NF20764_low_80
Description: NF20764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20764_low_80 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 34655581 - 34655797
Alignment:
| Q |
18 |
attaaaattgttcagttgttagatggatagaggcttgccttaaattgggggcaggggcagaagaggggattcatgttgaagtctggggaacaactgagag |
117 |
Q |
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| T |
34655581 |
attaaaattgttcggttgttagatggatagaggcttgccttaaattgggggcaggggcagaagaggggattcttgttgaagtctggggaacaactgagag |
34655680 |
T |
|
| Q |
118 |
caacaataggcaaaagacctgaacactgcatttccacccaaaatcttaaggcatcgagtatatggatcgagcaacaataggcatcgagtatatggatcac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34655681 |
caacaataggcaaaagacctgaacactgcatttccacccaaaatcttaaggcatcgagtatatggatcgagcaacaataggcatcgagtatatggatcac |
34655780 |
T |
|
| Q |
218 |
atctcttatatatcttt |
234 |
Q |
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||||||||||||||||| |
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| T |
34655781 |
atctcttatatatcttt |
34655797 |
T |
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