View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20765_low_16 (Length: 220)

Name: NF20765_low_16
Description: NF20765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20765_low_16
NF20765_low_16
[»] chr8 (44 HSPs)
chr8 (5-220)||(31128447-31128662)
chr8 (99-215)||(2603057-2603173)
chr8 (92-220)||(18806546-18806674)
chr8 (92-220)||(31226447-31226575)
chr8 (92-218)||(1155114-1155240)
chr8 (92-217)||(14426098-14426223)
chr8 (102-220)||(35973373-35973492)
chr8 (92-220)||(5535771-5535899)
chr8 (92-218)||(11777645-11777771)
chr8 (97-218)||(6519026-6519146)
chr8 (133-220)||(5978535-5978622)
chr8 (76-211)||(35468360-35468494)
chr8 (92-218)||(3628249-3628374)
chr8 (92-220)||(5139654-5139781)
chr8 (112-220)||(16531567-16531675)
chr8 (87-215)||(37673729-37673862)
chr8 (141-220)||(9134169-9134248)
chr8 (97-220)||(7288240-7288364)
chr8 (92-220)||(23982262-23982395)
chr8 (92-218)||(13629014-13629141)
chr8 (92-218)||(13729426-13729553)
chr8 (104-218)||(28540691-28540806)
chr8 (92-216)||(38937814-38937939)
chr8 (104-218)||(9604491-9604606)
chr8 (92-218)||(23036814-23036941)
chr8 (91-154)||(29811510-29811573)
chr8 (113-215)||(8673597-8673700)
chr8 (93-144)||(28557341-28557392)
chr8 (76-148)||(9135092-9135163)
chr8 (93-149)||(43976703-43976759)
chr8 (104-210)||(4797222-4797329)
chr8 (141-220)||(9133821-9133899)
chr8 (104-139)||(13079882-13079917)
chr8 (92-135)||(36317074-36317117)
chr8 (158-220)||(6427146-6427208)
chr8 (80-134)||(29416713-29416767)
chr8 (91-145)||(36815817-36815871)
chr8 (100-134)||(44104241-44104275)
chr8 (92-121)||(12795888-12795917)
chr8 (92-121)||(22800520-22800549)
chr8 (76-121)||(38230314-38230359)
chr8 (92-120)||(7177008-7177036)
chr8 (93-121)||(14523119-14523147)
chr8 (92-144)||(35893475-35893527)
[»] chr4 (39 HSPs)
chr4 (91-220)||(35331960-35332089)
chr4 (90-219)||(39629169-39629298)
chr4 (91-213)||(23359127-23359249)
chr4 (76-218)||(39055182-39055324)
chr4 (92-220)||(35382341-35382469)
chr4 (104-220)||(52199821-52199937)
chr4 (92-215)||(822357-822480)
chr4 (92-215)||(2396321-2396445)
chr4 (75-180)||(45833907-45834011)
chr4 (104-218)||(10180603-10180717)
chr4 (92-218)||(12447438-12447565)
chr4 (105-218)||(22628488-22628602)
chr4 (76-218)||(35144408-35144550)
chr4 (104-220)||(38864970-38865083)
chr4 (76-220)||(35308946-35309091)
chr4 (106-218)||(53096599-53096712)
chr4 (92-220)||(41115864-41115993)
chr4 (76-152)||(23607440-23607516)
chr4 (92-218)||(49211047-49211175)
chr4 (99-145)||(18743264-18743311)
chr4 (102-145)||(42426878-42426921)
chr4 (171-220)||(8824981-8825030)
chr4 (112-220)||(41915985-41916093)
chr4 (76-123)||(8489458-8489505)
chr4 (171-218)||(30865911-30865958)
chr4 (97-140)||(35547729-35547772)
chr4 (93-148)||(40047063-40047118)
chr4 (98-149)||(51788881-51788932)
chr4 (174-220)||(15839733-15839779)
chr4 (95-149)||(32409579-32409633)
chr4 (164-218)||(51655147-51655201)
chr4 (91-121)||(51968064-51968094)
chr4 (100-133)||(6077898-6077931)
chr4 (107-220)||(11346998-11347116)
chr4 (93-134)||(23928192-23928233)
chr4 (106-135)||(30865979-30866008)
chr4 (92-121)||(44516219-44516248)
chr4 (93-149)||(51175611-51175667)
chr4 (76-116)||(56397023-56397063)
[»] chr3 (29 HSPs)
chr3 (92-219)||(35539609-35539736)
chr3 (92-220)||(46006056-46006183)
chr3 (92-215)||(13755130-13755251)
chr3 (92-215)||(13768531-13768652)
chr3 (109-220)||(36902318-36902429)
chr3 (91-218)||(41212003-41212131)
chr3 (76-145)||(45603396-45603465)
chr3 (76-218)||(49109019-49109162)
chr3 (104-151)||(55272857-55272904)
chr3 (91-201)||(33290924-33291033)
chr3 (91-219)||(36277737-36277867)
chr3 (104-218)||(46048903-46049019)
chr3 (95-152)||(52393728-52393785)
chr3 (97-144)||(40242167-40242214)
chr3 (164-219)||(52995702-52995757)
chr3 (95-149)||(29950766-29950820)
chr3 (95-149)||(29999920-29999974)
chr3 (92-143)||(54043493-54043544)
chr3 (91-121)||(7325505-7325535)
chr3 (95-149)||(40485072-40485126)
chr3 (92-138)||(44110931-44110977)
chr3 (125-218)||(54422744-54422838)
chr3 (104-148)||(3973249-3973293)
chr3 (104-148)||(3993811-3993855)
chr3 (104-148)||(3996583-3996627)
chr3 (104-148)||(4010122-4010166)
chr3 (76-120)||(26085176-26085220)
chr3 (76-124)||(36619273-36619321)
chr3 (76-132)||(55222597-55222653)
[»] chr1 (37 HSPs)
chr1 (76-215)||(13984061-13984200)
chr1 (76-217)||(32451720-32451860)
chr1 (76-220)||(47783615-47783759)
chr1 (91-220)||(11120570-11120699)
chr1 (76-215)||(43822799-43822938)
chr1 (104-220)||(23333778-23333894)
chr1 (87-215)||(25813759-25813887)
chr1 (92-215)||(36166915-36167037)
chr1 (82-215)||(32851727-32851860)
chr1 (104-218)||(42831665-42831780)
chr1 (92-218)||(52353766-52353892)
chr1 (92-183)||(27544427-27544518)
chr1 (75-220)||(11241439-11241585)
chr1 (76-154)||(38902048-38902126)
chr1 (95-144)||(37073759-37073808)
chr1 (105-212)||(49003354-49003462)
chr1 (104-220)||(51263208-51263323)
chr1 (95-138)||(23655162-23655205)
chr1 (174-220)||(3623108-3623154)
chr1 (91-149)||(32913947-32914005)
chr1 (91-145)||(35988311-35988365)
chr1 (158-218)||(9505527-9505587)
chr1 (104-148)||(24555822-24555866)
chr1 (127-211)||(40287000-40287084)
chr1 (105-145)||(46487070-46487110)
chr1 (104-183)||(47364377-47364457)
chr1 (102-145)||(14775153-14775196)
chr1 (94-133)||(15726923-15726962)
chr1 (91-145)||(39864334-39864389)
chr1 (164-218)||(11566929-11566983)
chr1 (164-218)||(11569967-11570021)
chr1 (115-220)||(44665316-44665422)
chr1 (92-144)||(17349811-17349864)
chr1 (92-132)||(33041572-33041613)
chr1 (95-128)||(37524181-37524214)
chr1 (92-149)||(42401089-42401146)
chr1 (76-128)||(51504494-51504546)
[»] chr6 (13 HSPs)
chr6 (76-220)||(32658387-32658531)
chr6 (76-220)||(5002330-5002476)
chr6 (76-212)||(32977333-32977470)
chr6 (110-220)||(22281763-22281873)
chr6 (102-210)||(33755768-33755876)
chr6 (79-215)||(7693887-7694024)
chr6 (124-211)||(21940941-21941028)
chr6 (104-220)||(387743-387860)
chr6 (87-135)||(3705692-3705740)
chr6 (92-135)||(24072523-24072566)
chr6 (91-216)||(6988198-6988323)
chr6 (91-135)||(3436014-3436058)
chr6 (87-127)||(19069600-19069640)
[»] chr5 (29 HSPs)
chr5 (102-220)||(2375566-2375684)
chr5 (97-220)||(1309745-1309868)
chr5 (92-218)||(41520839-41520966)
chr5 (76-220)||(13420670-13420814)
chr5 (92-216)||(26675457-26675581)
chr5 (92-216)||(26947065-26947189)
chr5 (76-215)||(18396480-18396619)
chr5 (92-218)||(29558357-29558483)
chr5 (129-220)||(13486602-13486693)
chr5 (138-215)||(42951756-42951833)
chr5 (76-218)||(7293066-7293208)
chr5 (92-218)||(12593146-12593272)
chr5 (104-213)||(33133237-33133346)
chr5 (105-219)||(35463217-35463333)
chr5 (92-179)||(42551057-42551145)
chr5 (92-220)||(1666750-1666878)
chr5 (105-218)||(11200756-11200872)
chr5 (93-149)||(15958687-15958743)
chr5 (92-144)||(25324255-25324307)
chr5 (91-134)||(2970350-2970393)
chr5 (92-218)||(4432350-4432477)
chr5 (93-152)||(8516874-8516933)
chr5 (186-220)||(20420187-20420221)
chr5 (93-149)||(4277376-4277432)
chr5 (87-135)||(11200498-11200546)
chr5 (158-218)||(15468166-15468226)
chr5 (92-152)||(31051398-31051458)
chr5 (100-144)||(32080325-32080369)
chr5 (99-218)||(34382456-34382576)
[»] chr2 (27 HSPs)
chr2 (96-220)||(9583160-9583284)
chr2 (76-218)||(6710833-6710975)
chr2 (76-218)||(11921964-11922106)
chr2 (76-212)||(14772887-14773023)
chr2 (92-218)||(26312491-26312617)
chr2 (92-217)||(36887546-36887672)
chr2 (92-218)||(37347814-37347944)
chr2 (115-218)||(18970016-18970120)
chr2 (92-218)||(34375069-34375194)
chr2 (104-218)||(3668858-3668973)
chr2 (105-218)||(65383-65497)
chr2 (92-149)||(4634046-4634103)
chr2 (93-220)||(5038729-5038859)
chr2 (76-135)||(28857182-28857241)
chr2 (99-218)||(32887588-32887706)
chr2 (76-220)||(16117873-16118018)
chr2 (95-220)||(41068777-41068896)
chr2 (92-128)||(31050086-31050122)
chr2 (91-135)||(44887065-44887109)
chr2 (165-220)||(44887291-44887346)
chr2 (92-149)||(3703436-3703493)
chr2 (102-135)||(30465365-30465398)
chr2 (167-215)||(26297138-26297186)
chr2 (92-156)||(34178269-34178333)
chr2 (164-220)||(40999696-40999752)
chr2 (91-135)||(41000007-41000051)
chr2 (144-220)||(45135780-45135855)
[»] chr7 (29 HSPs)
chr7 (104-220)||(36657878-36657994)
chr7 (104-220)||(43302108-43302224)
chr7 (109-220)||(36482001-36482112)
chr7 (87-215)||(23156213-23156341)
chr7 (91-218)||(31330414-31330542)
chr7 (116-215)||(37698511-37698610)
chr7 (92-218)||(4958258-4958388)
chr7 (92-218)||(19987179-19987306)
chr7 (104-218)||(36656598-36656712)
chr7 (112-220)||(36901033-36901143)
chr7 (92-217)||(48767131-48767260)
chr7 (92-219)||(46282108-46282235)
chr7 (92-218)||(44441611-44441738)
chr7 (96-218)||(29914383-29914507)
chr7 (91-145)||(46748009-46748063)
chr7 (76-177)||(30859633-30859734)
chr7 (104-212)||(47841411-47841520)
chr7 (102-138)||(27334472-27334508)
chr7 (158-216)||(13057892-13057950)
chr7 (92-218)||(38223995-38224124)
chr7 (92-145)||(9429732-9429785)
chr7 (92-145)||(29770797-29770850)
chr7 (174-218)||(15018399-15018443)
chr7 (92-135)||(31322290-31322333)
chr7 (158-220)||(39853787-39853849)
chr7 (92-121)||(19735863-19735892)
chr7 (108-145)||(38360778-38360815)
chr7 (92-218)||(5513823-5513951)
chr7 (93-149)||(43788614-43788670)
[»] scaffold0017 (1 HSPs)
scaffold0017 (76-220)||(31764-31908)
[»] scaffold0036 (2 HSPs)
scaffold0036 (104-153)||(63636-63685)
scaffold0036 (115-215)||(2073-2173)
[»] scaffold0040 (2 HSPs)
scaffold0040 (92-138)||(59700-59746)
scaffold0040 (90-135)||(55753-55798)
[»] scaffold0528 (1 HSPs)
scaffold0528 (92-152)||(1483-1543)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 31128447 - 31128662
Alignment:
Q  5 gctatcttggaccaacctttagagcatccacaatagaaatacttatttttgggttcttaataagaacctaaaaatgggtcttacgcatacacatcattta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |    
T  31128447 gctatcttggaccaacctttagagcatccacaatagaaatacttatttttgggttcttaataagaacctaaaaatgggtctcacgcatacacatcactca 31128546  T
Q  105 tttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaata 204  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  31128547 tttataattttttaatagtagtacctaataagcattcaatcactctaacctaaatctctcacaaagttcttaaatgagacctactaataaactatcaata 31128646  T
Q  205 actttatatcattata 220  Q
    ||||||||||||||||    
T  31128647 actttatatcattata 31128662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 2603057 - 2603173
Alignment:
Q  99 catttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaacta 198  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||| ||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  2603057 catttatttataattttttaatagtagtatctaataagtactcaatccctccaatccagatctcacacaaagttcttaaatgagatccactaatcaacta 2603156  T
Q  199 tcaataactttatatca 215  Q
    |||||||||||||||||    
T  2603157 tcaataactttatatca 2603173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 18806546 - 18806674
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||| |||  ||||||| |||||| || ||||||| |||| |||||    
T  18806546 tacacatcacttatttataattttttaatagtagtatctaataaacattcgatcactcaaacctagatctcacacaaattttttaaatgggatccactaa 18806645  T
Q  192 taaactatcaataactttatatcattata 220  Q
    | |||||||||||||||||||||||||||    
T  18806646 tcaactatcaataactttatatcattata 18806674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 31226447 - 31226575
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||| ||||| |||  ||||||| ||||||||||||||||| || | ||||     
T  31226447 tacacatcactcatttataattttttaatagtagtacctaataaatactcaaacactccaacctagatctcacacaaagttcttaaatgggacccactac 31226546  T
Q  192 taaactatcaataactttatatcattata 220  Q
    | |||||||||||| ||||||||||||||    
T  31226547 tcaactatcaataattttatatcattata 31226575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 1155114 - 1155240
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | |||||||||||||||||||||||| ||||||| || |||||| ||| ||| |||||||| |||||| |||||||||||||  || |||    
T  1155114 tacacatcactcatttataattttttaatagtagtatctaataagcattcaatccctccaacccagatctcacacaaatttcttaaatgagacatattaa 1155213  T
Q  192 taaactatcaataactttatatcatta 218  Q
    | ||||| |||||||||||||||||||    
T  1155214 tcaactaccaataactttatatcatta 1155240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 14426098 - 14426223
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| || |||||||||||||||| | | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||   ||||     
T  14426098 tacacatcacttctttataattttttaattgcaatacctaataaacactcaatcactccaactcagatctcacacaaagttcttaaatgggactcactac 14426197  T
Q  192 taaactatcaataactttatatcatt 217  Q
    | || ||||||||| |||||||||||    
T  14426198 tcaattatcaataattttatatcatt 14426223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 35973373 - 35973492
Alignment:
Q  102 ttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatc 200  Q
    |||||||||||||||||||||| |||||||||||||||| ||||  || ||||||  ||||| |||| | |||||||||||||||||||||| || ||||    
T  35973373 ttatttataattttttaatagttgtacctaataaacacttaatccatccaactcaatatctcacacacatttcttaaatgagatctactaatcaattatc 35973472  T
Q  201 aataactttatatcattata 220  Q
    |||||| |||||||||||||    
T  35973473 aataacattatatcattata 35973492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 5535771 - 5535899
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | |||||||||||||||||| |||||||| |||| ||||||||||||| |||  ||||||| ||||||||||||||| |  | | || ||    
T  5535771 tacacatcactcatttataattttttaatattagtaccttataagcactcaatcactccaacctagatctcacacaaagttcttaaacggaacccacaaa 5535870  T
Q  192 taaactatcaataactttatatcattata 220  Q
    | |||| ||||||||||||||||||||||    
T  5535871 tcaactttcaataactttatatcattata 5535899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 11777645 - 11777771
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    |||| |||||| ||||||||||| ||||||||||||||||| || || |||||| ||  ||  || || || |||||| ||||||||||||| |||||||    
T  11777645 tacaaatcattcatttataatttcttaatagtagtacctaacaagcattcaatccctgcaatccatatatcacacaaatttcttaaatgagacctactaa 11777744  T
Q  192 taaactatcaataactttatatcatta 218  Q
    | |||||||||||||||||||||||||    
T  11777745 tcaactatcaataactttatatcatta 11777771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 6519026 - 6519146
Alignment:
Q  97 atcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaac 196  Q
    |||| ||||||||||||||||||||||||||||||||||  | |||||| ||| ||| |||   ||||||||| |||||||||||||   |||||| |||    
T  6519026 atcacttatttataattttttaatagtagtacctaataagaattcaatctctccaacccagca-tctcacaaatttcttaaatgagactcactaatcaac 6519124  T
Q  197 tatcaataactttatatcatta 218  Q
    ||||||||||||||||||||||    
T  6519125 tatcaataactttatatcatta 6519146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 5978535 - 5978622
Alignment:
Q  133 taaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||||||||||||| ||| |||||||  ||||||||||||||||| || | |||||| |||||||||||||||||||||||||||    
T  5978535 taaacactcaatcactccaacccagatctgacacaaagttcttaaatgggacccactaatcaactatcaataactttatatcattata 5978622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 211
Target Start/End: Complemental strand, 35468494 - 35468360
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||| ||||||||| | ||||||||||||| ||||| ||||| ||||||  |||||||| ||| ||| | |||||| | ||||||||||    
T  35468494 aaatgggtctcacgcgtacacatcactcatttataattttt-aatagcagtacttaataagtactcaatccctccaacactgatctcactcaaagttctt 35468396  T
Q  176 aaatgagatctactaataaactatcaataactttat 211  Q
    ||||||||   |||||| ||||||||||||||||||    
T  35468395 aaatgagactcactaattaactatcaataactttat 35468360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 3628374 - 3628249
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    |||| |||||||||||||||||||||||||||||| | |||||| |||| |||  ||| ||||||| | ||||||||| ||||||||||| ||  | |||    
T  3628374 tacatatcatttatttataattttttaatagtagtgcttaataagcactaaattcctccaactcag-tatctcacaaatttcttaaatgaaattcattaa 3628276  T
Q  192 taaactatcaataactttatatcatta 218  Q
    | ||||| |||||||||||||||||||    
T  3628275 tcaactagcaataactttatatcatta 3628249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 5139654 - 5139781
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||| | || ||||||||||||| |  ||||||||||||||  ||| |||||||| ||| |||||||| ||||||| |||||||||| |   |||||    
T  5139654 tacacataacttgtttataatttttttaatgtagtacctaataat-acttaatcactccaacccagatctcacacaaagctcttaaatgaaactcactaa 5139752  T
Q  192 taaactatcaataactttatatcattata 220  Q
    | |||||||||||| ||||||||||||||    
T  5139753 tcaactatcaataattttatatcattata 5139781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 16531567 - 16531675
Alignment:
Q  112 ttttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttat 211  Q
    ||||||||||||| ||  |||||| |||||||||| || |||  |||||||  ||||| |||||||| ||||||||||||| ||||||  ||||||||||    
T  16531567 ttttttaatagtaatatttaataagcactcaatcattccaacctagatctcatacaaaattcttaaaagagatctactaatcaactattcataactttat 16531666  T
Q  212 atcattata 220  Q
    |||||||||    
T  16531667 atcattata 16531675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 37673729 - 37673862
Alignment:
Q  87 acgcatacacatcatttatttataattttttaatagtagtacctaataa--ac---actcaatcactctaactcagatctctcacaaagttcttaaatga 181  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||  ||   ||| |||| ||| ||  |||||||| ||||||||||||||||      
T  37673729 acgcgtacacatcactcatttataattttttaatagtagtacctaataagtacttaacttaatccctccaatccagatctcacacaaagttcttaaattg 37673828  T
Q  182 gatctactaataaactatcaataactttatatca 215  Q
    || | |||||| |||||||||||| |||||||||    
T  37673829 gacccactaatcaactatcaataattttatatca 37673862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 9134248 - 9134169
Alignment:
Q  141 caatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||||| |||  ||||||| ||||||||||||||||||||   |||||| |||||||||||||||||||||||||||    
T  9134248 caatcactcaaacctagatctcacacaaagttcttaaatgagactcactaatcaactatcaataactttatatcattata 9134169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 7288364 - 7288240
Alignment:
Q  97 atcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaa 195  Q
    |||| |||||||||||| ||| ||||||||| |||||||  ||| |||| ||| ||| ||| |||||  | ||| |||||||||||||  ||||||| ||    
T  7288364 atcacttatttataattgtttcatagtagtatctaataagaacttaatccctccaacccagcatctcatagaaatttcttaaatgagacttactaatcaa 7288265  T
Q  196 ctatcaataactttatatcattata 220  Q
    ||||| |||||||||||||||||||    
T  7288264 ctatcgataactttatatcattata 7288240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 23982395 - 23982262
Alignment:
Q  92 tacacatcatttatttataattttttaatagtag-tacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatc----t 186  Q
    ||||||||| | ||||||||||||||||||  |  ||| ||||||  || ||||||||| ||| |||||||  ||||||||||||||||| ||||    |    
T  23982395 tacacatcactcatttataattttttaataaaaaatacttaataatgacccaatcactccaacccagatcttacacaaagttcttaaatgggatccacgt 23982296  T
Q  187 actaataaactatcaataactttatatcattata 220  Q
    |||||  |||||||||||||||||||||||||||    
T  23982295 actaaccaactatcaataactttatatcattata 23982262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 13629014 - 13629141
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactc-agatctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||||| |||||||||||||||||||||||| |||||||  | |||||| ||| ||| | | |||||  ||||| |||||||||  |||| |  |    
T  13629014 tacacatcattcatttataattttttaatagtagtatctaataagtagtcaatccctccaacccaacatctcatacaaaattcttaaataggatccagaa 13629113  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || ||||||||||||||||||| |||||    
T  13629114 atcaactatcaataactttataccatta 13629141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 13729426 - 13729553
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactc-agatctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||||| |||||||||||||||||||||||| |||||||  | |||||| ||| ||| | | |||||  ||||| |||||||||  |||| |  |    
T  13729426 tacacatcattcatttataattttttaatagtagtatctaataagtagtcaatccctccaacccaacatctcatacaaaattcttaaataggatccagaa 13729525  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || ||||||||||||||||||| |||||    
T  13729526 atcaactatcaataactttataccatta 13729553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 28540806 - 28540691
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    ||||||||||||||||||||||||| ||||||  | ||||| |||| ||| ||| ||||| |||||| |||||||| ||||   |||||| |||||||||    
T  28540806 atttataattttttaatagtagtacttaataagtattcaattactccaacccagcatctcacacaaatttcttaaaagagactcactaatcaactatcaa 28540707  T
Q  203 taactttatatcatta 218  Q
    ||  ||||||||||||    
T  28540706 tagttttatatcatta 28540691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 38937939 - 38937814
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    |||| |||| ||||||||||||||||||||||   |||||||||  |||||||| ||| ||| ||  ||||| ||||||||| ||||||  |||| || |    
T  38937939 tacatatcacttatttataattttttaatagtgacacctaataagaactcaatccctccaacacaacatctcacacaaagtttttaaataggatccacaa 38937840  T
Q  191 ataaactatcaataactttatatcat 216  Q
    || ||||||||| |||||||||||||    
T  38937839 atcaactatcaacaactttatatcat 38937814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 9604491 - 9604606
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    |||||||||||||||||| ||||| |||||||  ||||||||  || ||| ||| |||||  | ||| ||||||||||  | | |||||| |||||||||    
T  9604491 atttataattttttaataatagtatctaataagaactcaatccatccaacccagcatctcataaaaatttcttaaatggaacccactaatcaactatcaa 9604590  T
Q  203 taactttatatcatta 218  Q
    ||||||||||||||||    
T  9604591 taactttatatcatta 9604606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 23036941 - 23036814
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| | | ||||||||||| |||||||||| |||||||  |||||||| ||  ||| ||| ||||| |||||| |||||||  || ||| |||     
T  23036941 tacacatcactcaattataatttttcaatagtagtatctaataagaactcaatctcttcaacccagcatctcacacaaatttcttaatagaaatccactg 23036842  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || |||||||||||| ||||||||||||    
T  23036841 atcaactatcaataattttatatcatta 23036814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 29811573 - 29811510
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaact 154  Q
    |||| ||| |||||||||||||||||||||| |||||  |||||||||||||||||||| ||||    
T  29811573 atactcataatttatttataattttttaataatagtaaataataaacactcaatcactcaaact 29811510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 215
Target Start/End: Original strand, 8673597 - 8673700
Alignment:
Q  113 tttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaataactttat 211  Q
    ||||||||||||||||||||||| ||||||||| ||| ||| ||| ||||| || ||| || ||||||  || | |||||| || |||||| ||||||||    
T  8673597 tttttaatagtagtacctaataagcactcaatctctccaacccagcatctcacataaattttttaaatttgacccactaatcaattatcaaaaactttat 8673696  T
Q  212 atca 215  Q
    ||||    
T  8673697 atca 8673700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 28557392 - 28557341
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaat 144  Q
    |||||||| | ||||||||||||||||||||||||||||||||  |||||||    
T  28557392 acacatcactaatttataattttttaatagtagtacctaataactactcaat 28557341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 9135163 - 9135092
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcact 148  Q
    |||||||||| |||  |||| |||| | ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  9135163 aaatgggtctcacgtgtacatatcactcatttacaattttt-aatagtagtacctaataagcactcaatcact 9135092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 43976759 - 43976703
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||||||||||||||||||||||||||  |||||||| |||  ||||||| ||||    
T  43976759 acacatcatttatttataattttttaataaaagtacctattaaggactcaatgactc 43976703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 4797222 - 4797329
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    |||||||||||||||||||||| |  ||||||| |   |||| ||| ||||||| ||||| |||||| |||||||||| ||   | |||| |||||||||    
T  4797222 atttataattttttaatagtagcatttaataaatatctaatccctccaactcagcatctcacacaaatttcttaaatgtgactcattaatcaactatcaa 4797321  T
Q  203 taacttta 210  Q
    ||||||||    
T  4797322 taacttta 4797329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 9133899 - 9133821
Alignment:
Q  141 caatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||||| |||  ||||||| ||||||||||||||||||||   |||||| ||||| ||| ||| |||||||||||||    
T  9133899 caatcactcaaacctagatctcacacaaagttcttaaatgagactcactaatcaactaccaaaaac-ttatatcattata 9133821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 13079917 - 13079882
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacac 139  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13079917 atttataatttttgaatagtagtacctaataaacac 13079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 36317117 - 36317074
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    |||||||||||||||||||||| || ||| ||||||||||||||    
T  36317117 tacacatcatttatttataattattcaatcgtagtacctaataa 36317074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 6427146 - 6427208
Alignment:
Q  158 atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||| |||||| || ||||||  || |||||||| |||||||||||| ||||||||||||||    
T  6427146 atctcacacaaattttttaaataggacctactaatcaactatcaataattttatatcattata 6427208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 29416767 - 29416713
Alignment:
Q  80 gggtcttacgcatacacatcatttatttataattttttaatagtagtacctaata 134  Q
    |||||||||  | ||||||||||| ||||| ||||||||||| ||||||||||||    
T  29416767 gggtcttacatagacacatcatttctttattattttttaataatagtacctaata 29416713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 36815817 - 36815871
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    ||||| |||||||||||||| ||||||||||||| || ||||||| ||| |||||    
T  36815817 atacatatcatttatttatatttttttaatagtaatatctaataagcacgcaatc 36815871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 44104275 - 44104241
Alignment:
Q  100 atttatttataattttttaatagtagtacctaata 134  Q
    |||||||||||||||||||||| ||||||||||||    
T  44104275 atttatttataattttttaataatagtacctaata 44104241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 121
Target Start/End: Original strand, 12795888 - 12795917
Alignment:
Q  92 tacacatcatttatttataattttttaata 121  Q
    ||||||||||||||||||||||||||||||    
T  12795888 tacacatcatttatttataattttttaata 12795917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 121
Target Start/End: Original strand, 22800520 - 22800549
Alignment:
Q  92 tacacatcatttatttataattttttaata 121  Q
    ||||||||||||||||||||||||||||||    
T  22800520 tacacatcatttatttataattttttaata 22800549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 38230314 - 38230359
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaata 121  Q
    |||||||| | |||| |||||||| |||||||||||||||||||||    
T  38230314 aaatgggtttcacgcgtacacatcttttatttataattttttaata 38230359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 7177008 - 7177036
Alignment:
Q  92 tacacatcatttatttataattttttaat 120  Q
    |||||||||||||||||||||||||||||    
T  7177008 tacacatcatttatttataattttttaat 7177036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 121
Target Start/End: Original strand, 14523119 - 14523147
Alignment:
Q  93 acacatcatttatttataattttttaata 121  Q
    |||||||||||||||||||||||||||||    
T  14523119 acacatcatttatttataattttttaata 14523147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 35893527 - 35893475
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaat 144  Q
    ||||||| |||| |||||||||||||||||||||||  |||||| || |||||    
T  35893527 tacacattatttctttataattttttaatagtagtatttaataagcagtcaat 35893475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 35331960 - 35332089
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctacta 190  Q
    |||||||| | ||||||||| ||||||||||||||||| |||||| ||||||||||||| ||| |||||||| ||||||||||||||||| |||| ||||    
T  35331960 atacacattacttatttatacttttttaatagtagtacataataagcactcaatcactccaacccagatctcacacaaagttcttaaatgggatccacta 35332059  T
Q  191 ataaactatcaataactttatatcattata 220  Q
    || |||||||||||||||||||||||||||    
T  35332060 atcaactatcaataactttatatcattata 35332089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 39629169 - 39629298
Alignment:
Q  90 catacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctact 189  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| ||| |||||| | |||||||||||||||||||||| |||    
T  39629169 catacacatcatttatttataattttttaatagtagtatctaataagcactaaatcactccaacccagatcacacacaaagttcttaaatgagatccact 39629268  T
Q  190 aataaactatcaataactttatatcattat 219  Q
    ||  |||||||||||| |||||||||||||    
T  39629269 aaacaactatcaataattttatatcattat 39629298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 23359249 - 23359127
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctacta 190  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||| |||  ||||||| |||||||||||||||||||||| || |    
T  23359249 atacacatcattcatttataattttttaatagtagtatctaataagcactcaatcactccaacctagatctcacacaaagttcttaaatgagatccacaa 23359150  T
Q  191 ataaactatcaataactttatat 213  Q
    || ||||||||||||||||||||    
T  23359149 atcaactatcaataactttatat 23359127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 39055324 - 39055182
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||| ||||||||| | |||||||||||||||||| |||||||||||||  | | |||| ||| |||||||||||| ||||||||||||    
T  39055324 aaatgggtctcacgcgtacacatcactcatttataattttttaatattagtacctaataagtattaaatccctccaactcagatctcacacaaagttctt 39055225  T
Q  176 aaatgagatctactaataaactatcaataactttatatcatta 218  Q
    |||||| | | |||||| |||||||||||||||||||||||||    
T  39055224 aaatgaaacccactaatcaactatcaataactttatatcatta 39055182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 35382341 - 35382469
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||| || |||||||||| ||| ||||| || ||||||||||||||||||||   |||||    
T  35382341 tacacctcattcatttataattttttaatagtagtacataataagcattcaatcactccaacccagatttcacacaaagttcttaaatgagacacactaa 35382440  T
Q  192 taaactatcaataactttatatcattata 220  Q
    | |||||||| ||||||||||||||||||    
T  35382441 tcaactatcactaactttatatcattata 35382469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 52199937 - 52199821
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||| ||||||||||||||||| || | ||||||  |||||||||    
T  52199937 atttataattttttaatagtagtacctaataagcattcaatcactccaacccagatctcacacaaagttcttaaatgggacccactaatccactatcaat 52199838  T
Q  204 aactttatatcattata 220  Q
    || | ||||||||||||    
T  52199837 aattatatatcattata 52199821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 822357 - 822480
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||||||||||||| |||||||||||||||| |||||||  |||||||| ||| ||| |||||||| ||||||||||||||||||||   | |||    
T  822357 tacacatcatttatttatagttttttaatagtagtatctaataagtactcaatccctccaacccagatctcacacaaagttcttaaatgagacacattaa 822456  T
Q  192 taaactatcaataactttatatca 215  Q
    | ||||||||||||| ||||||||    
T  822457 tcaactatcaataacattatatca 822480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 2396445 - 2396321
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||  |||||||| ||| ||||||| ||||| || ||| ||||||||||  | | ||||    
T  2396445 tacacatcacttatttataatttgttaatagtagtacctaataagaactcaatcgctcaaactcagcatctcacaaaaatttcttaaatggaacccacta 2396346  T
Q  191 ataaactatcaataactttatatca 215  Q
    || ||||||||||||||||||||||    
T  2396345 atcaactatcaataactttatatca 2396321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 45834011 - 45833907
Alignment:
Q  75 aaaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttct 174  Q
    ||||||||||| |||  ||||||||| | ||||||||||||||||||||| ||  |||||| ||||||||||||| ||| |||||||| |||||||||||    
T  45834011 aaaatgggtctcacgtgtacacatcactcatttataattttttaatagtaatat-taataagcactcaatcactccaacccagatctcacacaaagttct 45833913  T
Q  175 taaatg 180  Q
    ||||||    
T  45833912 taaatg 45833907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 10180603 - 10180717
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    ||||||||||||||||||||||||||||||||  |||||||  ||| |||  || ||||  |||||| ||||||||||||||| || ||| |||||||||    
T  10180603 atttataattttttaatagtagtacctaataagaactcaatgcctccaacctagcatcttacacaaatttcttaaatgagatccac-aatcaactatcaa 10180701  T
Q  203 taactttatatcatta 218  Q
    ||||||||||||||||    
T  10180702 taactttatatcatta 10180717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 12447565 - 12447438
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    |||| |||| |||||||||||||||||||||||||   ||||||  ||||||||  | |||| ||| ||||| || ||| ||||||||| ||| | ||||    
T  12447565 tacaaatcacttatttataattttttaatagtagtctataataagaactcaatccttttaacccagcatctcacaaaaatttcttaaataagacccacta 12447466  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || |||||||||||||||||||||||||    
T  12447465 atcaactatcaataactttatatcatta 12447438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 22628602 - 22628488
Alignment:
Q  105 tttataattttttaatagtagtacctaataaacactcaatcactctaactc-agatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| || | | ||| | |||||| || ||||||| ||   |||||| ||||||||||    
T  22628602 tttataattttttaataggagtacataataaacactcaatctctctgacccaatatcacacacaaattttttaaatgggactcactaatcaactatcaat 22628503  T
Q  204 aactttatatcatta 218  Q
    |||||||||||||||    
T  22628502 aactttatatcatta 22628488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 35144550 - 35144408
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||  |||| |||| ||||||||||||||||| |||||||| ||||||| || |||||| ||| ||| ||||||||  ||||| |||||    
T  35144550 aaatgggtctcacgtgtacatatcaattatttataattttttagtagtagtatctaataagcattcaatccctccaacccagatctcatacaaatttctt 35144451  T
Q  176 aaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||   ||| ||| |||||| || ||||| |||||| |||||    
T  35144450 aaatagaatccactgataaaccattaataattttataccatta 35144408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 38864970 - 38865083
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    ||||||||||||||||||||||||| ||| || |||| |||||||| ||| |||||||| |||||||||||||   | |||| || ||| |||||||||     
T  38864970 atttataattttttaatagtagtacttaaaaagcacttaatcactccaacccagatctcacacaaagttctta---gggatccaccaatcaactatcaac 38865066  T
Q  204 aactttatatcattata 220  Q
    || |||||||| |||||    
T  38865067 aattttatatcgttata 38865083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 35308946 - 35309091
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttct 174  Q
    ||||| |||| |||| ||||| ||| ||||||||||||||||||||||| || |||||||  |||||||| ||||| |  || | ||| |||||  || |    
T  35308946 aaatgagtctcacgcgtacacgtcacttatttataattttttaatagtaatatctaataagtactcaatccctctagcctagcaactcacacaatttttt 35309045  T
Q  175 taaatgagatctactaataaactatcaataactttatatcattata 220  Q
    |||||| ||   |||||| |||||||||||||||||||||||||||    
T  35309046 taaatgggactcactaatcaactatcaataactttatatcattata 35309091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 53096599 - 53096712
Alignment:
Q  106 ttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaata 204  Q
    ||||||||||||||||||| ||| ||||||  |||||||| || |||| ||  ||||| |||||| |||||||||| || | |||||| |||||||||||    
T  53096599 ttataattttttaatagtaatacttaataagaactcaatccctttaacccaacatctcacacaaatttcttaaatgggaccaactaatcaactatcaata 53096698  T
Q  205 actttatatcatta 218  Q
    ||||||||| ||||    
T  53096699 actttatattatta 53096712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 41115993 - 41115864
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaac-tcagatctctcacaaagttcttaaatgagatctacta 190  Q
    |||| |||| ||||||||| ||||| |||||||||| |||||||||| |||||| | | ||| | | ||||| || ||| |||||||| |||||| ||||    
T  41115993 tacatatcacttatttatagtttttaaatagtagtatctaataaacattcaatcccacaaacctaacatctcacaaaaacttcttaaacgagatcaacta 41115894  T
Q  191 ataaactatcaataactttatatcattata 220  Q
     | | |||||||||||||||||| ||||||    
T  41115893 ctcatctatcaataactttatattattata 41115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 23607516 - 23607440
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa 152  Q
    |||||||||| ||| |||||||| | |||||||||||||||||||||||||| ||| |||  |||||||| ||||||    
T  23607516 aaatgggtctcacgtatacacattacttatttataattttttaatagtagtatctattaagaactcaatctctctaa 23607440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 49211175 - 49211047
Alignment:
Q  92 tacacatcatttatttataatttttt-aatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctact 189  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||  |||| ||| ||| |||  || ||||| || ||| | ||||||||||| | | |    
T  49211175 tacatatcatttatttataatttttttaatagtagtatctaataagaactctatccctccaacctagcatctcacaaaaattccttaaatgagacccatt 49211076  T
Q  190 aataaactatcaataactttatatcatta 218  Q
    ||| || ||||||||||||||||||||||    
T  49211075 aatcaattatcaataactttatatcatta 49211047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18743264 - 18743311
Alignment:
Q  99 catttatttataatttt-ttaatagtagtacctaataaacactcaatc 145  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  18743264 catttatttataatttttttaatagtagtacctaataagcactcaatc 18743311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 42426878 - 42426921
Alignment:
Q  102 ttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    |||||||||||||||||||||||||| |||||||| ||||||||    
T  42426878 ttatttataattttttaatagtagtatctaataaaaactcaatc 42426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 8825030 - 8824981
Alignment:
Q  171 ttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||||||  | |||||||| |||||||||||||||||||||||||||    
T  8825030 ttcttaaatggaacctactaatcaactatcaataactttatatcattata 8824981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 41915985 - 41916093
Alignment:
Q  112 ttttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttat 211  Q
    ||||||||||||||||  ||||||||||| |||| |||||||||| || ||  ||||| || |||||| ||| |  | ||| || ||| ||||| |||||    
T  41915985 ttttttaatagtagtatttaataaacacttaatctctctaactcatatttcatacaaatttattaaataagaccctcaaatcaagtataaataattttat 41916084  T
Q  212 atcattata 220  Q
    |||||||||    
T  41916085 atcattata 41916093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 8489458 - 8489505
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagt 123  Q
    ||||||||||||||  || |||||| ||||||||||||||||||||||    
T  8489458 aaatgggtcttacgtgtatacatcacttatttataattttttaatagt 8489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 30865958 - 30865911
Alignment:
Q  171 ttcttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    |||||||||||||   |||||| |||||||||||||||||||||||||    
T  30865958 ttcttaaatgagactcactaatcaactatcaataactttatatcatta 30865911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 35547729 - 35547772
Alignment:
Q  97 atcatttatttataattttttaatagtagtacctaataaacact 140  Q
    ||||||||||||||||||||||| |||||||  |||||||||||    
T  35547729 atcatttatttataattttttaacagtagtatttaataaacact 35547772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 40047118 - 40047063
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcact 148  Q
    ||||||||||| || |||||||||||||| |||||||||||| | |||||| ||||    
T  40047118 acacatcattttttaataattttttaataatagtacctaatagatactcaaccact 40047063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 51788881 - 51788932
Alignment:
Q  98 tcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    ||||||||||||||||||||||||  |||| || ||||||| ||||||||||    
T  51788881 tcatttatttataattttttaataacagtaacttataaacattcaatcactc 51788932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 15839733 - 15839779
Alignment:
Q  174 ttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||||||| || |||| | |||||||||||||||||||||||||    
T  15839733 ttaaatgagatatattaatcatctatcaataactttatatcattata 15839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 32409633 - 32409579
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||| ||||||||||||||||||||  |||||||| |||| ||||||| ||||    
T  32409633 acatcacttatttataattttttaataaaagtacctattaaagactcaatgactc 32409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 51655201 - 51655147
Alignment:
Q  164 cacaaagttcttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    |||||| || |||||||||| | |||||| |||||||||||| ||||||||||||    
T  51655201 cacaaatttattaaatgagaccaactaatcaactatcaataattttatatcatta 51655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 121
Target Start/End: Original strand, 51968064 - 51968094
Alignment:
Q  91 atacacatcatttatttataattttttaata 121  Q
    |||||||||||||||||||||||||||||||    
T  51968064 atacacatcatttatttataattttttaata 51968094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 133
Target Start/End: Original strand, 6077898 - 6077931
Alignment:
Q  100 atttatttataattttttaatagtagtacctaat 133  Q
    |||||||||||||||||||||| |||||||||||    
T  6077898 atttatttataattttttaataatagtacctaat 6077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 11347116 - 11346998
Alignment:
Q  107 tataattttttaatagtagtacctaataaacactcaatcact----ctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatca 201  Q
    |||||||||||||||||||||||||||||  | |||||| ||    | ||| ||| ||||| |||||| |||||||||||||   | |||| || ||| |    
T  11347116 tataattttttaatagtagtacctaataagtattcaatccctccaaccaacccagcatctcacacaaatttcttaaatgagacgcattaatcaattatta 11347017  T
Q  202 ataactttatatcattata 220  Q
    |||| ||||||||||||||    
T  11347016 ataattttatatcattata 11346998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 23928192 - 23928233
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaata 134  Q
    |||||||| || ||||||||||||||||| ||||||||||||    
T  23928192 acacatcacttttttataattttttaataatagtacctaata 23928233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 30866008 - 30865979
Alignment:
Q  106 ttataattttttaatagtagtacctaataa 135  Q
    ||||||||||||||||||||||||||||||    
T  30866008 ttataattttttaatagtagtacctaataa 30865979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 121
Target Start/End: Original strand, 44516219 - 44516248
Alignment:
Q  92 tacacatcatttatttataattttttaata 121  Q
    ||||||||||||||||||||||||||||||    
T  44516219 tacacatcatttatttataattttttaata 44516248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 51175667 - 51175611
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||||| ||||||||||||||||||||  |||||||| |||  ||||||| ||||    
T  51175667 acacatcacttatttataattttttaataaaagtacctattaaggactcaatgactc 51175611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 56397023 - 56397063
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttt 116  Q
    |||||| ||||||| |||||||||| |||||||||||||||    
T  56397023 aaatggatcttacgtatacacatcacttatttataattttt 56397063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 4e-40; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 35539736 - 35539609
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||||| ||||||||||||||||| || | | |||    
T  35539736 tacacatcatttatttataattttttaatagtagtacctaataaacactcgatcactccaaccaagatctcacacaaagttcttaaatgggacccattaa 35539637  T
Q  192 taaactatcaataactttatatcattat 219  Q
    | ||||||||||||||||||||| ||||    
T  35539636 tcaactatcaataactttatatcgttat 35539609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 46006056 - 46006183
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | |||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||  ||||||||||||||||  || | | |||    
T  46006056 tacacatcactcatttataattttttaatagtagtacctaataa-cattcaatcactccaacccagatcttacacaaagttcttaaatttgacccagtaa 46006154  T
Q  192 taaactatcaataactttatatcattata 220  Q
    | |||||||||||||||||||||||||||    
T  46006155 tcaactatcaataactttatatcattata 46006183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 13755130 - 13755251
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | ||||||||||||||||||||||||| ||||||  |||||||| ||||||| | |  ||| |||||| |||||||||| || | |  ||    
T  13755130 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaaccctg--ctcacacaaatttcttaaatgggacccaaaaa 13755227  T
Q  192 taaactatcaataactttatatca 215  Q
    | ||||||||||||||||||||||    
T  13755228 tcaactatcaataactttatatca 13755251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 13768531 - 13768652
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | ||||||||||||||||||||||||| ||||||  |||||||| ||||||| | |  ||  |||||| |||||||||| || | || ||    
T  13768531 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--cttacacaaatttcttaaatgggacccacaaa 13768628  T
Q  192 taaactatcaataactttatatca 215  Q
    | ||||||||||||||||||||||    
T  13768629 tcaactatcaataactttatatca 13768652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 36902318 - 36902429
Alignment:
Q  109 taattttttaatagtagtacctaataaacactcaatcactct-aactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataact 207  Q
    ||||||||||| |||| || |||||||| ||||||| ||| | ||||||||||||  ||||| ||||||||||| ||  |||||| ||||||||||||||    
T  36902318 taattttttaacagtaatatctaataaatactcaat-actttcaactcagatctcaaacaaatttcttaaatgaaattcactaatcaactatcaataact 36902416  T
Q  208 ttatatcattata 220  Q
    |||||||||||||    
T  36902417 ttatatcattata 36902429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 41212131 - 41212003
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa-ctcagatctctcacaaagttcttaaatgagatctact 189  Q
    |||||||| | | |||||||||||| ||||||||||||||||||| || | |||| ||| || |  | |||||  ||||  |||||||||||||  ||||    
T  41212131 atacacataactcatttataattttgtaatagtagtacctaataagcagtaaatccctccaatcgaacatctcatacaagtttcttaaatgagacatact 41212032  T
Q  190 aataaactatcaataactttatatcatta 218  Q
    ||| |||||||||||||||||||||||||    
T  41212031 aatcaactatcaataactttatatcatta 41212003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 45603396 - 45603465
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    ||||| |||| ||| |||||||||||| |||||||||||| ||||| |||||| ||||||||||||||||    
T  45603396 aaatgagtctcacgtatacacatcattcatttataattttataataatagtacttaataaacactcaatc 45603465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 49109019 - 49109162
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttct 174  Q
    ||||| |||| |||| |||| || |||||||||||| |||| | |||||||||||||||| ||||||||| ||| |||  || |||||  ||| | || |    
T  49109019 aaatgagtctcacgcgtacaaattatttatttataacttttcattagtagtacctaataagcactcaatctctcaaaccgagcatctcatacatattttt 49109118  T
Q  175 taaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||||  ||| |||||  |||||||||||| ||||||||||||    
T  49109119 taaatggaatccactaaccaactatcaataaatttatatcatta 49109162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 55272904 - 55272857
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactcta 151  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  55272904 atttataattttttaataatagtacataataaacactcaatcactcta 55272857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 33290924 - 33291033
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctacta 190  Q
    |||||||||||||||||||||  |||||| |||||||||||||| ||||| |||  ||| |||  | || || |||||| ||||||||||||||| || |    
T  33290924 atacacatcatttatttataa-attttaacagtagtacctaatatacacttaatacctcaaaccaatatatcacacaaatttcttaaatgagatccacga 33291022  T
Q  191 ataaactatca 201  Q
    || ||||||||    
T  33291023 attaactatca 33291033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 36277737 - 36277867
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttctt-aaatgagatctac 188  Q
    ||||||| || | ||||||||||||||||||||| || |||||||  | |||||  ||| ||||||| ||||| |||||| || || |||| | | | ||    
T  36277737 atacacagcactaatttataattttttaatagtaatatctaataagtattcaattcctccaactcagcatctcacacaaatttttttaaattaaacccac 36277836  T
Q  189 taataaactatcaataactttatatcattat 219  Q
    ||||||| |||||||||||||||||||||||    
T  36277837 taataaaatatcaataactttatatcattat 36277867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 46049019 - 46048903
Alignment:
Q  104 atttataatttttt-aatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatct-actaataaactatc 200  Q
    |||||||||||||| |||| |||||||||||||  |  ||||| ||| ||||||| ||||| ||||||||||||||||| || || || ||| |||||||    
T  46049019 atttataatttttttaatattagtacctaataagtatccaatccctccaactcagcatctcacacaaagttcttaaatg-gaactcacaaatcaactatc 46048921  T
Q  201 aataactttatatcatta 218  Q
    |||||||||||| |||||    
T  46048920 aataactttataccatta 46048903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 52393785 - 52393728
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa 152  Q
    |||||||||||||||||||||||||||  | || |||||||||| |||||||||||||    
T  52393785 acatcatttatttataattttttaataacaatatctaataaacattcaatcactctaa 52393728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 40242167 - 40242214
Alignment:
Q  97 atcatttatttataattttttaatagtagtacctaataaacactcaat 144  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  40242167 atcacttatttataattttttaatagtaatacctaataagcactcaat 40242214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 52995702 - 52995757
Alignment:
Q  164 cacaaagttcttaaatgagatctactaataaactatcaataactttatatcattat 219  Q
    |||||| || ||||||||||  ||||||| ||||||||||||||||||||||||||    
T  52995702 cacaaatttgttaaatgagacatactaatcaactatcaataactttatatcattat 52995757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 29950766 - 29950820
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||| | ||||||| |||||||||||||||| ||||||| |||||||||||||    
T  29950766 acatcactcatttatatttttttaatagtagtatctaataagcactcaatcactc 29950820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 29999920 - 29999974
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||| | ||||||| |||||||||||||||| ||||||| |||||||||||||    
T  29999920 acatcactcatttatatttttttaatagtagtatctaataagcactcaatcactc 29999974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 54043493 - 54043544
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaa 143  Q
    |||||||| |||||  |||||||||||||||||||| ||||||| |||||||    
T  54043493 tacacatcttttatcaataattttttaatagtagtaactaataaccactcaa 54043544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 121
Target Start/End: Original strand, 7325505 - 7325535
Alignment:
Q  91 atacacatcatttatttataattttttaata 121  Q
    |||||||||||||||||||||||||||||||    
T  7325505 atacacatcatttatttataattttttaata 7325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 40485072 - 40485126
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    ||||||||  ||||||||||||||||| ||||||||||||| || |||| |||||    
T  40485072 acatcattcttttataattttttaataatagtacctaataagcattcaaccactc 40485126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 44110977 - 44110931
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaaca 138  Q
    ||||||| ||| ||||||||||||||||||||| ||||||| |||||    
T  44110977 tacacataattcatttataattttttaatagtattacctaacaaaca 44110931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 54422838 - 54422744
Alignment:
Q  125 gtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    |||||||| |||||||||||| ||| |||  || ||||  | |||| ||||||||||||| | |||||| || ||||||||| ||||||||||||    
T  54422838 gtacctaaaaaacactcaatctctccaacctagtatctaacgcaaatttcttaaatgagacccactaatcaattatcaataattttatatcatta 54422744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 3973249 - 3973293
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcact 148  Q
    |||||||| |||||||||||| ||| || ||||||||||||||||    
T  3973249 atttataaatttttaatagtaatacttagtaaacactcaatcact 3973293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 3993855 - 3993811
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcact 148  Q
    |||||||| |||||||||||| ||| || ||||||||||||||||    
T  3993855 atttataaatttttaatagtaatacttagtaaacactcaatcact 3993811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 3996627 - 3996583
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcact 148  Q
    |||||||| |||||||||||| ||| || ||||||||||||||||    
T  3996627 atttataaatttttaatagtaatacttagtaaacactcaatcact 3996583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 4010166 - 4010122
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcact 148  Q
    |||||||| |||||||||||| ||| || ||||||||||||||||    
T  4010166 atttataaatttttaatagtaatacttagtaaacactcaatcact 4010122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 26085220 - 26085176
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaat 120  Q
    |||||||||| |||  ||||||||||| |||||||||||||||||    
T  26085220 aaatgggtctcacgtgtacacatcattcatttataattttttaat 26085176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 36619321 - 36619273
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagta 124  Q
    |||||||||| |||  ||||||||| | |||||||||||||||||||||    
T  36619321 aaatgggtctcacgtgtacacatcactgatttataattttttaatagta 36619273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 55222653 - 55222597
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaa 132  Q
    |||||||||| |||  |||| |||| | |||||||||||||||||||||||| ||||    
T  55222653 aaatgggtctcacgtgtacatatcagtcatttataattttttaatagtagtatctaa 55222597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 13984200 - 13984061
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||  ||||||||||||||   |||||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| |||||| |||||    
T  13984200 aaatgggtcccacgcatacacatcacacatttataattttttaatagtagtatctaataagtactcaatctctctaacccagatctcacacaaaattctt 13984101  T
Q  176 aaatgagatctactaataaactatcaataactttatatca 215  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  13984100 aaatgagacctactaatcaactatcaataactttatatca 13984061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 32451720 - 32451860
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||  ||||||||| | ||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||| || |||||||||    
T  32451720 aaatgggtctcacgtttacacatcactaatttataattttttaatagtaatacctaataagcattcaatcactccaactcagatctcaca-aaagttctt 32451818  T
Q  176 aaatgagatctactaataaactatcaataactttatatcatt 217  Q
    |||||||| | ||||||||| |||||||||||||||||||||    
T  32451819 aaatgagacccactaataaattatcaataactttatatcatt 32451860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 47783615 - 47783759
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||  |||||||||||| ||||||||||||||||| |||||  |||||||||||||||||||| |||||| ||||| ||||||||||||    
T  47783615 aaatgggtctcacgtgtacacatcatttgtttataattttttaataatagtatttaataaacactcaatcactccaactcaaatctcacacaaagttctt 47783714  T
Q  176 aaatgagatctactaataaactatcaataactttatatcattata 220  Q
    |||||  | ||| |||| |||||||||||| ||||||||||||||    
T  47783715 aaatggaacctattaatcaactatcaataattttatatcattata 47783759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 11120699 - 11120570
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctacta 190  Q
    |||||||||| | |||||||||| ||||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||   ||| ||||    
T  11120699 atacacatcactcatttataattctttaatagtagtatctaataaacactcaattactccaacgcagatctcacacaaagttcttaaatacaatccacta 11120600  T
Q  191 ataaactatcaataactttatatcattata 220  Q
    || |||||||||||||||||||||||||||    
T  11120599 atcaactatcaataactttatatcattata 11120570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 43822938 - 43822799
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||  |||| ||||||||| | |||||||||||||||||||||||| ||||||| ||||||||  ||| ||| |||||||| ||||||||||||    
T  43822938 aaatgggtcccacgcgtacacatcactcatttataattttttaatagtagtatctaataagcactcaattcctccaacccagatctcacacaaagttctt 43822839  T
Q  176 aaatgagatctactaataaactatcaataactttatatca 215  Q
    ||||| || | |||||| ||||||||||||||||||||||    
T  43822838 aaatgggacccactaatcaactatcaataactttatatca 43822799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 23333894 - 23333778
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||| ||| |||||||| |||| |||||||||||||||   ||| || || |||||||    
T  23333894 atttataattttttaataatagtacttaataagcactcaatcactccaacccagatctcacacacagttcttaaatgagactcactgatcaaatatcaat 23333795  T
Q  204 aactttatatcattata 220  Q
    |||||||||| ||||||    
T  23333794 aactttatattattata 23333778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 25813887 - 25813759
Alignment:
Q  87 acgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatct 186  Q
    |||| ||||||||| | ||||||||||||||||||| ||||| ||||||  ||||  || ||| ||| |||||||| | |||||||||||||||||| |     
T  25813887 acgcgtacacatcactcatttataattttttaatagaagtacataataagtactcggtccctccaacccagatctcacgcaaagttcttaaatgagaccc 25813788  T
Q  187 actaataaactatcaataactttatatca 215  Q
    |||||| |||||||||||| |||||||||    
T  25813787 actaatcaactatcaataattttatatca 25813759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 36167037 - 36166915
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  |||||||  ||| |||  | || || |||||| |||||||||  ||   |||||    
T  36167037 tacacatcatttatttataattttttaat-gtagtacctaataattactcaattcctccaacctaaatgtcacacaaaattcttaaattggactcactaa 36166939  T
Q  192 taaactatcaataactttatatca 215  Q
    ||||||||||||||||||||||||    
T  36166938 taaactatcaataactttatatca 36166915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 32851727 - 32851860
Alignment:
Q  82 gtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatga 181  Q
    |||| |||| ||||||||| | ||||| |||||||||||||||||| ||||||| || |||||  ||| | | |||||||| ||| |||||||||||||     
T  32851727 gtctcacgcgtacacatcactcatttacaattttttaatagtagtatctaataagcaatcaattcctccatcccagatctcccacgaagttcttaaatgg 32851826  T
Q  182 gatctactaataaactatcaataactttatatca 215  Q
    ||   |||||| |||||||||||| |||||||||    
T  32851827 gacacactaatcaactatcaataattttatatca 32851860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 42831780 - 42831665
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    ||||||||||||||||||||||||||||||||  ||| |||  ||| |||  || ||||| || ||| ||||||||||||||| | |||| |||||||||    
T  42831780 atttataattttttaatagtagtacctaataagaactaaattcctccaacctagcatctcacaaaaatttcttaaatgagatccattaatcaactatcaa 42831681  T
Q  203 taactttatatcatta 218  Q
    ||| ||||||||||||    
T  42831680 taattttatatcatta 42831665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 52353766 - 52353892
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| | ||||||||||||||||||| |||||||||||| ||||| ||| ||| ||  ||| ||||| |||||| |||||||||   | | ||||    
T  52353766 tacacatcactaatttataattttttaatagcagtacctaataagcactcgatccctccaa-gcagcatctcacacaaatttcttaaatagaacccacta 52353864  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || |||||||||||||||||||||||||    
T  52353865 atcaactatcaataactttatatcatta 52353892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 27544518 - 27544427
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgaga 183  Q
    ||||||||| | |||||||||||||||||| ||| | ||||||| ||||||||| ||| ||| |||||||  |||| |||||||||||||||    
T  27544518 tacacatcactcatttataattttttaataatagcatctaataagcactcaatccctccaacccagatctgacacacagttcttaaatgaga 27544427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 11241439 - 11241585
Alignment:
Q  75 aaaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactca-gatctctcacaaagttc 173  Q
    ||||||| ||| ||| ||||||| || | |||||||||||||||||| |||||| |||||||||| ||||  ||| ||  ||  || || |||||| ||     
T  11241439 aaaatggatctcacgtatacacaccactcatttataattttttaatattagtacataataaacacccaattcctccaatccataatttcacacaaatttt 11241538  T
Q  174 ttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||| |  ||| |||||| |||||||||||||||||||||||||||    
T  11241539 ttaaaaggtatccactaatcaactatcaataactttatatcattata 11241585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 38902126 - 38902048
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaact 154  Q
    |||||||||| |||  |||| |||| | |||||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  38902126 aaatgggtctcacgtgtacatatcactcatttataattttttaatagtagtacctaataagcactcgatcactcaaact 38902048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 37073808 - 37073759
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacctaataaacactcaat 144  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  37073808 acatcatttatttataattttttaatactagtatctaataaacactcaat 37073759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 49003354 - 49003462
Alignment:
Q  105 tttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    |||||||||||||||||||| ||||||||||  | |||||| ||| |||  || ||||| |||||| ||||||||| ||| | || ||| ||||||||||    
T  49003354 tttataattttttaatagtaatacctaataagtattcaatctctccaaccgagcatctcacacaaaattcttaaattagacccacaaatcaactatcaat 49003453  T
Q  204 aactttata 212  Q
    |||||||||    
T  49003454 aactttata 49003462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 51263323 - 51263208
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    |||||||| |||| |||| ||||||||||| | |||||||||| |  || ||||   ||||||||| ||||||||||| |   |||||| ||||||||||    
T  51263323 atttataaattttcaataatagtacctaatgagcactcaatcatttcaattcagca-tctcacaaatttcttaaatgaaacacactaatcaactatcaat 51263225  T
Q  204 aactttatatcattata 220  Q
    |||||||| ||||||||    
T  51263224 aactttatgtcattata 51263208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 23655162 - 23655205
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacctaataaaca 138  Q
    ||||||||||||||||||||||||||| |||||| |||||||||    
T  23655162 acatcatttatttataattttttaataatagtacttaataaaca 23655205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 3623108 - 3623154
Alignment:
Q  174 ttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  3623108 ttaaatgagatttactaatcaactatcaataactttagatcattata 3623154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 32914005 - 32913947
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||   ||||||||||||    
T  32914005 atacacatcatttttttataattttttaataatagtatctaataggtactcaatcactc 32913947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 35988365 - 35988311
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    ||||| |||| |||||||||||||||||||| || |||||||| |||||||||||    
T  35988365 atacaaatcaattatttataattttttaataatattacctaattaacactcaatc 35988311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 9505527 - 9505587
Alignment:
Q  158 atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||| || ||| |||||||| |||| |||||||| |||||||||||||||||||| ||||    
T  9505527 atctcgcataaatttcttaaacgagacctactaatcaactatcaataactttatattatta 9505587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 24555822 - 24555866
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcact 148  Q
    |||||||||||||||||||||||| ||||||| || |||||||||    
T  24555822 atttataattttttaatagtagtatctaataagcattcaatcact 24555866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 40287000 - 40287084
Alignment:
Q  127 acctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttat 211  Q
    ||||||||| |||| |||| ||| ||| |||||||| ||||||||| ||||||| || |  ||||| |||||||||||| |||||    
T  40287000 acctaataagcactaaatccctccaacccagatctcacacaaagttattaaatgggacccgctaatcaactatcaataattttat 40287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 46487110 - 46487070
Alignment:
Q  105 tttataattttttaatagtagtacctaataaacactcaatc 145  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  46487110 tttataattttttaataataatacctaataaacactcaatc 46487070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 47364457 - 47364377
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgaga 183  Q
    ||||||||||||| ||||||||||  ||||||| ||| |||||||  |||| || ||||| |||||| |||||||||||||    
T  47364457 atttataatttttaaatagtagtatataataaatacttaatcacttcaactgagcatctcacacaaatttcttaaatgaga 47364377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 14775153 - 14775196
Alignment:
Q  102 ttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||    
T  14775153 ttatttataattttctaatagtagtaactaataaatactcaatc 14775196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 15726923 - 15726962
Alignment:
Q  94 cacatcatttatttataattttttaatagtagtacctaat 133  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  15726923 cacataatttatttataattttttaatagtagtatctaat 15726962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 39864334 - 39864389
Alignment:
Q  91 atacacatcatttatttataatttt-ttaatagtagtacctaataaacactcaatc 145  Q
    ||||| |||||| |||||||||||| ||||||| ||||||||||||||||| ||||    
T  39864334 atacatatcattcatttataatttttttaatagaagtacctaataaacacttaatc 39864389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 11566929 - 11566983
Alignment:
Q  164 cacaaagttcttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    |||||| |||| ||||||||  || |||| |||||||||||||||||||||||||    
T  11566929 cacaaatttctcaaatgagacttattaatcaactatcaataactttatatcatta 11566983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 11569967 - 11570021
Alignment:
Q  164 cacaaagttcttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    |||||| |||| ||||||||  || |||| |||||||||||||||||||||||||    
T  11569967 cacaaatttctcaaatgagacttattaatcaactatcaataactttatatcatta 11570021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 44665316 - 44665422
Alignment:
Q  115 tttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatat 213  Q
    |||||||||| || |||||||  |||||||| ||| ||  ||| |||||  |||||  |||||||||| ||  |||||| |||||||||||| |||||||    
T  44665316 tttaatagtaatatctaataagtactcaatcgctccaatccagtatctcatacaaatctcttaaatgaaatacactaatcaactatcaataattttatat 44665415  T
Q  214 cattata 220  Q
    |||||||    
T  44665416 cattata 44665422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 17349811 - 17349864
Alignment:
Q  92 tacacatcatttattt-ataattttttaatagtagtacctaataaacactcaat 144  Q
    |||||||||||||||| ||||||||||||||  | |||||||||| ||||||||    
T  17349811 tacacatcatttattttataattttttaatatcaatacctaataatcactcaat 17349864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 33041613 - 33041572
Alignment:
Q  92 tacacatcatttatttataatt-ttttaatagtagtacctaa 132  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  33041613 tacacatcatttatttataatttttttagtagtagtacctaa 33041572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 37524181 - 37524214
Alignment:
Q  95 acatcatttatttataattttttaatagtagtac 128  Q
    |||||||| |||||||||||||||||||||||||    
T  37524181 acatcattcatttataattttttaatagtagtac 37524214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 42401146 - 42401089
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    ||||||||| |  |||||||||||||||||  |||||||||||| |||||| ||||||    
T  42401146 tacacatcactcttttataattttttaataacagtacctaataagcactcagtcactc 42401089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 51504494 - 51504546
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtac 128  Q
    |||||||||| |||  || |||||| | |||||||||||||||||||||||||    
T  51504494 aaatgggtctcacgtgtatacatcactcatttataattttttaatagtagtac 51504546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 32658387 - 32658531
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||   |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||| ||||||||||||    
T  32658387 aaatgggtctcacgtggacacatcactcatttataattttttaatagtagtacctaataaacactaaatcactccaacccatatctcacacaaagttctt 32658486  T
Q  176 aaatgagatctactaataaactatcaataactttatatcattata 220  Q
    |||||  ||| |||||| |||||||||||||||||||||| ||||    
T  32658487 aaatggaatccactaatcaactatcaataactttatatcagtata 32658531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 5002330 - 5002476
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaat--agtagtacctaataaacactcaatcactctaactcagatctctcacaaagttc 173  Q
    ||||||||||||||  ||||||||| ||||||||||||||||  |  ||||||| ||||||| ||||||||||||| |||  ||||||| ||||||||||    
T  5002330 aaatgggtcttacgtgtacacatcacttatttataatttttttttgtagtagtatctaataagcactcaatcactccaaccgagatctcacacaaagttc 5002429  T
Q  174 ttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||| || | |||||| |||||||||||||||||||| ||||||    
T  5002430 ttaaatgggacccactaatcaactatcaataactttatattattata 5002476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 32977333 - 32977470
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataatttt-ttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttct 174  Q
    |||||||||  |||| ||||||||| | |||||| ||||| |||||||||||||||||||| ||||||||| ||| ||| |||||||| |||||||||||    
T  32977333 aaatgggtcccacgcgtacacatcactcatttatgatttttttaatagtagtacctaataagcactcaatccctccaacccagatctcacacaaagttct 32977432  T
Q  175 taaatgagatctactaataaactatcaataactttata 212  Q
    |||||| || | |||||| |||||||||||||||||||    
T  32977433 taaatgggacccactaatcaactatcaataactttata 32977470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 22281763 - 22281873
Alignment:
Q  110 aattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataacttt 209  Q
    |||||||||||||||||||||||||| ||||||||||||| |||   |||||| ||||||||||||||||| |||  |||||| ||| ||||||||||||    
T  22281763 aattttttaatagtagtacctaataagcactcaatcactccaaccttgatctcccacaaagttcttaaatgggattcactaatcaaccatcaataacttt 22281862  T
Q  210 atatcattata 220  Q
    |||||||||||    
T  22281863 atatcattata 22281873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 33755876 - 33755768
Alignment:
Q  102 ttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatca 201  Q
    |||||||| |||||||||||||||||||||||||  | |||||||||| ||| || ||||| |||||| ||||||||||| ||| |||||| ||||||||    
T  33755876 ttatttattattttttaatagtagtacctaataagtattcaatcactccaacacaaatctcacacaaaattcttaaatgaaatccactaatcaactatca 33755777  T
Q  202 ataacttta 210  Q
    |||||||||    
T  33755776 ataacttta 33755768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 7693887 - 7694024
Alignment:
Q  79 tgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactca-gatctctcacaaagttcttaa 177  Q
    ||||||| ||| |||||||||| | ||||||||||||||| || |||||||||||||  |||||||| ||| ||| ||  ||||| |||||| || ||||    
T  7693887 tgggtctcacgtatacacatcactcatttataattttttagtaatagtacctaataagtactcaatccctccaacccataatctcacacaaattttttaa 7693986  T
Q  178 atgagatctactaataaactatcaataactttatatca 215  Q
    |||  | | |||||| ||||||||||||||| ||||||    
T  7693987 atggaacccactaatcaactatcaataacttcatatca 7694024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 21940941 - 21941028
Alignment:
Q  124 agtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttat 211  Q
    |||||||||||||||||||||| ||| ||| || ||||| ||||||  ||||||||| |  | |||||||||||||||||||||||||    
T  21940941 agtacctaataaacactcaatccctccaacccatatctcacacaaaagtcttaaatgggtcccactaataaactatcaataactttat 21941028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 387860 - 387743
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaat-cactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    |||||||||||||||||||||||| || |||  |||||||| || || | |  | || || |||||| ||||||||| ||| | |||||| |||||||||    
T  387860 atttataattttttaatagtagtatctgataggcactcaattcattcaatccaacatttcacacaaatttcttaaataagacccactaatcaactatcaa 387761  T
Q  203 taactttatatcattata 220  Q
    ||||||||||| ||||||    
T  387760 taactttatattattata 387743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 3705692 - 3705740
Alignment:
Q  87 acgcatacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    |||| ||||||||| ||||||  ||||||||||||||||||||||||||    
T  3705692 acgcgtacacatcacttatttggaattttttaatagtagtacctaataa 3705740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 24072523 - 24072566
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    |||||||||||| ||||||||||||||||| || ||||||||||    
T  24072523 tacacatcatttctttataattttttaatattaatacctaataa 24072566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 6988323 - 6988198
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa-ctcagatctctcacaaagttcttaaatgagatctact 189  Q
    |||||||| | || ||||||||||| ||||||| |||||||||||| ||| ||||||| ||| ||   |||||  || || || |||||||| | |||||    
T  6988323 atacacattacttgtttataattttataatagtggtacctaataaaaacttaatcactttaatctagtatctcatac-aattttttaaatgaaacctact 6988225  T
Q  190 aataaactatcaataactttatatcat 216  Q
    ||  |||||||||||| ||||||||||    
T  6988224 aaacaactatcaataattttatatcat 6988198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 3436014 - 3436058
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    |||||||||||| |||| |||||||||||||||| || |||||||    
T  3436014 atacacatcattcatttgtaattttttaatagtaatatctaataa 3436058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 19069640 - 19069600
Alignment:
Q  87 acgcatacacatcatttatttataattttttaatagtagta 127  Q
    |||||| ||||||| |||||||||||||||||||| |||||    
T  19069640 acgcatgcacatcaattatttataattttttaatattagta 19069600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 4e-37; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 2375684 - 2375566
Alignment:
Q  102 ttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatca 201  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | |||| ||||| ||||||||||||||||| || | |||||| ||||||||    
T  2375684 ttatttataattttttaatagtagtacctaataaacattcaatcactcaacctcaaatctcacacaaagttcttaaatgggacccactaatcaactatca 2375585  T
Q  202 ataactttatatcattata 220  Q
    |||||||||||| ||||||    
T  2375584 ataactttatataattata 2375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 1309745 - 1309868
Alignment:
Q  97 atcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaac 196  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||  || ||||| ||||||||||||||||  |||  |||||| ||     
T  1309745 atcatttatttataattttttaataatagtatctaataagcactcaatcactccaatccaaatctcacacaaagttcttaaattggatacactaatcaat 1309844  T
Q  197 tatcaataactttatatcattata 220  Q
    ||||||||| ||||||||||||||    
T  1309845 tatcaataattttatatcattata 1309868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 41520839 - 41520966
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| |||||||||||||||||||||| |||||||||||  |||||||| ||| ||| ||| ||||| |||||||||| |||||| || | || |    
T  41520839 tacacatcacttatttataattttttaatagtggtacctaataagaactcaatccctccaacccagcatctcacacaaagttcctaaatgggacccacaa 41520938  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || ||||||||||||||||||| |||||    
T  41520939 attaactatcaataactttataccatta 41520966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 13420670 - 13420814
Alignment:
Q  76 aaatgggtctt-acgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttct 174  Q
    ||||||||||| ||| ||| |||||| |||||| ||||||| ||||||| |||| |||||| ||||| ||||||| |||| ||||||| ||||||||| |    
T  13420670 aaatgggtcttcacgtatatacatcacttatttgtaatttt-taatagtggtacttaataatcactcgatcactccaacttagatctcacacaaagttgt 13420768  T
Q  175 taaatgagatctactaataaactatcaataactttatatcattata 220  Q
    |||||| ||   |||||| |||||||||||||||||||| ||||||    
T  13420769 taaatgggactcactaatcaactatcaataactttatataattata 13420814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 26675457 - 26675581
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | |||||||||||||||||||||||| || |||| |||| ||||  || |||||||||||| || ||| ||||||||| ||| | |||||    
T  26675457 tacacatcactcatttataattttttaatagtagtatcttataagcacttaatccttccaactcagatctcacataaatttcttaaattagacccactaa 26675556  T
Q  192 taaactatcaataactttatatcat 216  Q
    | || ||||||||||||||||||||    
T  26675557 tcaaatatcaataactttatatcat 26675581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 26947065 - 26947189
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | |||||||||||||||||||||||| || |||| |||| ||||  || |||||||||||| || ||| ||||||||| ||| | |||||    
T  26947065 tacacatcactcatttataattttttaatagtagtatcttataagcacttaatccttccaactcagatctcacataaatttcttaaattagacccactaa 26947164  T
Q  192 taaactatcaataactttatatcat 216  Q
    | || ||||||||||||||||||||    
T  26947165 tcaaatatcaataactttatatcat 26947189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 215
Target Start/End: Original strand, 18396480 - 18396619
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||  |||| ||||||||  | |||||||||||||||||| |||||||||||||| |||||||  ||||||||  |||||| ||||||  ||||    
T  18396480 aaatgggtcacacgcgtacacatccctcatttataattttttaataatagtacctaataaatactcaattcctctaacttggatctcacacaaaaatctt 18396579  T
Q  176 aaatgagatctactaataaactatcaataactttatatca 215  Q
    ||||| || | || ||| |||||| |||||||||||||||    
T  18396580 aaatgggacccaccaatcaactataaataactttatatca 18396619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 29558483 - 29558357
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| | ||||| |||||||||||| |||||| |||||| |||| |||| ||  ||||||| ||||| |||||| ||||||||| ||||||| ||    
T  29558483 tacacatcactcatttacaattttttaataatagtac-taataagcacttaatctcttcaactcagcatctcacacaaatttcttaaataagatctaata 29558385  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || |||||||||||| ||||||||||||    
T  29558384 atcaactatcaataattttatatcatta 29558357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 13486693 - 13486602
Alignment:
Q  129 ctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||| |||||||  | | |||||| | |||||||||||||||||||||||||    
T  13486693 ctaataagcactcaatcactccaacctagatctctcacaaagtttttaaatggaacccactaatcagctatcaataactttatatcattata 13486602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 42951756 - 42951833
Alignment:
Q  138 actcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatca 215  Q
    |||||||| ||| |||||||||||| |||||||||||||||||||| | |||||| || ||||||||| |||||||||    
T  42951756 actcaatccctccaactcagatctcacacaaagttcttaaatgagacccactaatcaattatcaataattttatatca 42951833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 7293208 - 7293066
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||  |||| | ||||||||| ||||||||||||||||||||| ||||| ||||  | ||| || |||  || || ||||| ||||||||| ||    
T  7293208 aaatgggtcccacgcgtgcacatcattcatttataattttttaatagtaataccttataagtattcattccctccgacccaaatctcacacaaagttttt 7293109  T
Q  176 aaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||  ||   |||||| ||||||||||||| |||||||||||    
T  7293108 aaataggactcactaattaactatcaataacattatatcatta 7293066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 12593272 - 12593146
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | |||||||| ||||||||||||||| |||||||  ||||| || | |   | ||  ||||  ||||| ||||||||||||| | |||||    
T  12593272 tacacatcactcatttataactttttaatagtagtatctaataagtactcattcccccatccccacgtctcaaacaaatttcttaaatgagaccaactaa 12593173  T
Q  192 taaactatcaataactttatatcatta 218  Q
    | || ||||||||||||||||||||||    
T  12593172 tcaattatcaataactttatatcatta 12593146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 33133237 - 33133346
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    |||||||| |||||||||||| ||  || ||| ||||||||| ||| ||||||| ||||| |||||| ||||||||| |||   |||||| |||||||||    
T  33133237 atttataaatttttaatagtaatattta-taagcactcaatctctcaaactcagcatctcacacaaatttcttaaataagactcactaatcaactatcaa 33133335  T
Q  203 taactttatat 213  Q
    |||||||||||    
T  33133336 taactttatat 33133346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 35463217 - 35463333
Alignment:
Q  105 tttataattttttaatagtagtacctaataaacactcaat-cactctaactc-agatctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    |||||||||||||||||||||||||||||||  ||||||| |  || ||| | | ||||| |||||| ||||||||||| ||  |  ||| |||||||||    
T  35463217 tttataattttttaatagtagtacctaataagtactcaatcctttcaaacccaacatctcacacaaatttcttaaatgaaattcataaatcaactatcaa 35463316  T
Q  203 taactttatatcattat 219  Q
    ||| |||||||||||||    
T  35463317 taattttatatcattat 35463333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 42551057 - 42551145
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaat 179  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| || |||||| ||| |||  || ||||| |||||| |||||||||    
T  42551057 tacacatcattcatttataattttttaataatagtacataataagcaatcaatccctcaaacctagcatctcacacaaatttcttaaat 42551145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 1666750 - 1666878
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||||||| ||||||||||| | |  |||||| | |||| ||||||||| ||| ||| ||| || |  ||| || ||||||||||  ||||| ||    
T  1666750 tacacatcatttacttataatttttaactc-tagtactttataagcactcaatctctccaacccagcattttacacgaatttcttaaatggaatctaata 1666848  T
Q  191 ataaactatcaataactttatatcattata 220  Q
    || ||||||||||||||||||||| |||||    
T  1666849 atcaactatcaataactttatatcgttata 1666878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 11200872 - 11200756
Alignment:
Q  105 tttataattttttaatagtagtac--ctaataaacactcaatcactctaa-ctcagatctctcacaaagttcttaaatgagatctactaataaactatca 201  Q
    |||||||||||||||| |||| ||  ||||||||||||||||  |||||| || | ||||| |||||| ||||| ||| ||| ||| | || ||||||||    
T  11200872 tttataattttttaattgtagcactcctaataaacactcaattcctctaatctaacatctcacacaaaattcttgaataagacctattgatcaactatca 11200773  T
Q  202 ataactttatatcatta 218  Q
    |||| ||||||| ||||    
T  11200772 ataattttatattatta 11200756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 15958687 - 15958743
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||||||||||||||||||||||||||  | |||||| |||| ||||||| ||||    
T  15958687 acacatcatttatttataattttttaataaaattacctattaaagactcaataactc 15958743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 25324307 - 25324255
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaat 144  Q
    |||| |||||| ||||||||||||||||||||| || |||||| |||||||||    
T  25324307 tacaaatcattcatttataattttttaatagtaatatctaatatacactcaat 25324255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 2970350 - 2970393
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaata 134  Q
    |||||||||| | ||||||||||||||||||||||||| |||||    
T  2970350 atacacatcactcatttataattttttaatagtagtacataata 2970393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 4432477 - 4432350
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||| ||||||||||||||| ||||||||||| ||| ||| ||  | |||||| ||  ||| ||| ||||| || ||| ||||||||||||||  | |     
T  4432477 tacacctcatttatttataatattttaatagtaatacttaaaaagaattcaatcccttaaacgcagcatctcacaaaaatttcttaaatgagattcattg 4432378  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || | |||||||||||||||||| ||||    
T  4432377 atcagctatcaataactttatataatta 4432350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 8516874 - 8516933
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa 152  Q
    |||||||||||||||||||||||||||||  ||||| || |||  ||||||| |||||||    
T  8516874 acacatcatttatttataattttttaataaaagtacttattaaggactcaatgactctaa 8516933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 20420221 - 20420187
Alignment:
Q  186 tactaataaactatcaataactttatatcattata 220  Q
    ||||||| |||||||||||||||||||||||||||    
T  20420221 tactaatcaactatcaataactttatatcattata 20420187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 4277376 - 4277432
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||||| || || |||||||||||||| |||||||||||||  |||||| |||||    
T  4277376 acacatcactttttaataattttttaataatagtacctaataactactcaaccactc 4277432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 11200546 - 11200498
Alignment:
Q  87 acgcatacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    |||| ||||||||| | |||||||||||||||||| || ||||||||||    
T  11200546 acgcgtacacatcactcatttataattttttaataataatacctaataa 11200498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 15468166 - 15468226
Alignment:
Q  158 atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||| |||||| |||||||||| |||| |||||| |  ||||||||| ||||||||||||    
T  15468166 atctcacacaaatttcttaaatgggatccactaatcatttatcaataattttatatcatta 15468226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 31051398 - 31051458
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa 152  Q
    ||||||| ||||||||||||||||||||||  |||| ||| |||| | ||||| |||||||    
T  31051398 tacacattatttatttataattttttaataaaagtatctattaaagattcaatgactctaa 31051458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 32080369 - 32080325
Alignment:
Q  100 atttatttataattttttaatagtagtacctaataaacactcaat 144  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||    
T  32080369 atttatttttaatattttaataatagtacctaataaacattcaat 32080325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 34382456 - 34382576
Alignment:
Q  99 catttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaact 197  Q
    |||||||| |||||||||||| ||| |||| ||||||| ||| |||| ||| ||| ||| | ||| |||| |  |||||||  || |||| |||| | ||    
T  34382456 catttattaataattttttaaaagtggtacataataaaaacttaatctctccaacccagcaactcacacagatatcttaaacaaggtctattaatcatct 34382555  T
Q  198 atcaataactttatatcatta 218  Q
    |||||||| ||||||||||||    
T  34382556 atcaataattttatatcatta 34382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 9583284 - 9583160
Alignment:
Q  96 catcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaa 195  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||||||||||||||  || | |||||| ||    
T  9583284 catcacttatttataattttttaatagtagtatctaataagcactcaatcactcaaactcagatctcacacaaagttcttaaattggacccactaatcaa 9583185  T
Q  196 ctatcaataactttatatcattata 220  Q
     | |||||||||||| |||||||||    
T  9583184 ttgtcaataactttacatcattata 9583160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 6710833 - 6710975
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||  |||| |||| | |||||||||||||||||||||||| ||||||| |||||| |||||| |||  ||||||| ||||||||||||    
T  6710833 aaatgggtctcacgtgtacagatcactcatttataattttttaatagtagtatctaataagcactcagtcactccaacctagatctcacacaaagttctt 6710932  T
Q  176 aaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||   ||| | |||| |||||||||||||||||||||||||    
T  6710933 aaatagaatcaattaatcaactatcaataactttatatcatta 6710975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 11922106 - 11921964
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||  ||||||| | | ||||||||||||||||||||||||||||| || ||||||||  ||| ||| || ||||| |||||| |||||    
T  11922106 aaatgggtctcacgtgtacacattactcatttataattttttaatagtagtacctaaaaagcactcaattcctccaacccaaatctcacacaaatttctt 11922007  T
Q  176 aaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||| || |||||||| ||||| |||||||||||||||||||    
T  11922006 aaatgggacctactaatcaactaccaataactttatatcatta 11921964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 14772887 - 14773023
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| |||| ||||||||||| |||||||||||||||| | |||||||||||||  |||||||  ||| ||| |||||||| ||||||||||||    
T  14772887 aaatgggtctcacgcgtacacatcattcatttataattttttaacaatagtacctaataagtactcaattcctccaacacagatctcacacaaagttctt 14772986  T
Q  176 aaatgagatctactaataaactatcaataactttata 212  Q
    ||||| ||   | |||| |||||||||||||||||||    
T  14772987 aaatgggactcattaatcaactatcaataactttata 14773023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 26312617 - 26312491
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaa 191  Q
    ||||||||| | |||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||||| |||||| || ||||||   | | |||||    
T  26312617 tacacatcactcatttataattttttaatagtagtacctaataagcactcaattcctccaactcagatctcacacaaatttattaaatagaacccactaa 26312518  T
Q  192 taaactatcaataactttatatcatta 218  Q
    | ||||| |||||||||||| ||||||    
T  26312517 tcaactaccaataactttatgtcatta 26312491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 36887546 - 36887672
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcaga-tctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| |||||||||| ||||||||| ||||| |||||||  ||||| || ||  | | |||| |||| || ||| ||||||||||||||| ||||    
T  36887546 tacacatcacttatttataaatttttaataatagtatctaataataactcagtcccttcagcgcagagtctcacaaaaaattcttaaatgagatccacta 36887645  T
Q  191 ataaactatcaataactttatatcatt 217  Q
    || |||||||||||| |||||||||||    
T  36887646 atcaactatcaataaatttatatcatt 36887672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 37347814 - 37347944
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag----atctctcacaaagttcttaaatgagatcta 187  Q
    ||||||||||||||||||||||||||||||||| || |||||||  | |||||| ||| ||| |||    ||||| ||||||||||||||||  || |||    
T  37347814 tacacatcatttatttataattttttaatagtaatatctaataagaattcaatccctccaacccagcatcatctcacacaaagttcttaaatatgaccta 37347913  T
Q  188 ctaataaactatcaataactttatatcatta 218  Q
    | ||| || | |||||||||||||| |||||    
T  37347914 caaatcaagtgtcaataactttataccatta 37347944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 18970120 - 18970016
Alignment:
Q  115 tttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatat 213  Q
    ||||||||||||||||||||||||||||||| ||  |||||||  |||| |||||| ||||||||||| |   |||||| |||||| |||||||||||||    
T  18970120 tttaatagtagtacctaataaacactcaatctcttcaactcagcctctcacacaaatttcttaaatgaaactcactaatcaactattaataactttatat 18970021  T
Q  214 catta 218  Q
     ||||    
T  18970020 aatta 18970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 34375194 - 34375069
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa-ctcagatctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  | |||||| ||| || || |||  ||||| |||  ||||||||| || | | ||    
T  34375194 tacacatcacttatttataattttttaatagtagtacctaataagaattcaatccctccaacctaaga--tctcaaaaaaatcttaaatgggacccatta 34375097  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || |||||||||||||||||||| ||||    
T  34375096 atcaactatcaataactttatattatta 34375069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 3668973 - 3668858
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    ||||||||||||||||||||||||  ||||||  ||||||||  || ||||||  || || |||||| ||||||||| ||| | |||||| ||||||| |    
T  3668973 atttataattttttaatagtagtaattaataagtactcaatccgtccaactcaatatatcacacaaatttcttaaataagaaccactaattaactatcga 3668874  T
Q  203 taactttatatcatta 218  Q
    ||| ||||||||||||    
T  3668873 taattttatatcatta 3668858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 65383 - 65497
Alignment:
Q  105 tttataattttttaatagtagtacctaataaacactcaatcactctaa-ctcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    |||||||||||||||| ||||||| ||||||||||| |||| ||| || |  | ||||| |||||| || |||||||||| | | |||| ||||||||||    
T  65383 tttataattttttaattgtagtacataataaacacttaatccctccaatccaacatctcacacaaatttattaaatgagaaccattaatcaactatcaat 65482  T
Q  204 aactttatatcatta 218  Q
    || ||| ||||||||    
T  65483 aagtttgtatcatta 65497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 4634103 - 4634046
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||||||||| | ||||||||||||||| |||||||||||||  ||||||||||||    
T  4634103 tacacatcatttttgtataattttttaataatagtacctaataagaactcaatcactc 4634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 5038859 - 5038729
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaa--atgagatctact 189  Q
    |||| |||||||||||||||||||||||| |||||  |||||| || |||||| ||| ||| | | ||||| |||||| |||||||   || || | |||    
T  5038859 acacctcatttatttataattttttaataatagtaattaataagcattcaatctctccaacccggcatctcacacaaatttcttaattgtgtgacccact 5038760  T
Q  190 aataaactatcaataactttatatcattata 220  Q
    ||| |||||||||||| ||||||| ||||||    
T  5038759 aatcaactatcaataattttatattattata 5038729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 28857241 - 28857182
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    |||||||||||||  |||||||| ||||||||||||||||||| ||||| ||| ||||||    
T  28857241 aaatgggtcttacttatacacataatttatttataattttttagtagtaatacttaataa 28857182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 32887588 - 32887706
Alignment:
Q  99 catttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaacta 198  Q
    |||| |||||||||||||||||||| || |||||||| || |||||| ||| ||  ||||| || || ||| || |||||| | ||| |||||| |||||    
T  32887588 cattcatttataattttttaatagtggtgcctaataagcattcaatctctccaatccagatatcacataaattttttaaat-aaatccactaatcaacta 32887686  T
Q  199 tcaataactttatatcatta 218  Q
    | ||||||||||||| ||||    
T  32887687 taaataactttatattatta 32887706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 16117873 - 16118018
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttct 174  Q
    |||||||||| |||  |||| |||| | ||||||||||||||||||  | |||||||||| ||||||||  ||| |||   | ||||| |||| | | |     
T  16117873 aaatgggtctcacgtgtacatatcactcatttataattttttaatatcaatacctaataagcactcaattcctccaaccatgcatctcacacatattcca 16117972  T
Q  175 taaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||||  ||| || ||| |||||||||||||||||||||||||||    
T  16117973 taaatggtatccacaaatcaactatcaataactttatatcattata 16118018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 41068777 - 41068896
Alignment:
Q  95 acatcatttatttataattttttaatagtagtacct-aataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctact-aat 192  Q
    |||||||| ||||||||||||| ||||||||||| | ||||| |||||||||| |||        |||| |||||| || |||||||||| | ||| |||    
T  41068777 acatcattcatttataatttttaaatagtagtacttaaataagcactcaatcattct-------ctctcacacaaaatttttaaatgaga-ccactaaat 41068868  T
Q  193 aaactatcaataactttatatcattata 220  Q
     |||||||||||||||||||||||||||    
T  41068869 caactatcaataactttatatcattata 41068896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 31050086 - 31050122
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtac 128  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31050086 tacacatcacttatttataattttttaatagtagtac 31050122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 44887065 - 44887109
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||    
T  44887065 atacatatcatttatttataattttttaataatagtatctaataa 44887109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 44887291 - 44887346
Alignment:
Q  165 acaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||| || |||||||||||| | |||| |||||||||||| ||||||||||||||    
T  44887291 acaaattttttaaatgagatccaataatcaactatcaataaatttatatcattata 44887346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 3703436 - 3703493
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    ||||||||||||||||||||| ||||||||  |||||||| |||  ||||||| ||||    
T  3703436 tacacatcatttatttataatattttaataaaagtacctattaaggactcaatgactc 3703493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 30465398 - 30465365
Alignment:
Q  102 ttatttataattttttaatagtagtacctaataa 135  Q
    |||||||||||||||||||||||||| |||||||    
T  30465398 ttatttataattttttaatagtagtatctaataa 30465365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 26297186 - 26297138
Alignment:
Q  167 aaagttcttaaatgagatctactaataaactatcaataactttatatca 215  Q
    |||||||||||||| ||||   |||| ||||||||||||||||||||||    
T  26297186 aaagttcttaaatgggatccgataatcaactatcaataactttatatca 26297138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 34178269 - 34178333
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactca 156  Q
    ||||| || ||||||||||  ||||||||| |||||| || ||||||||||||  ||||||||||    
T  34178269 tacacttcttttatttatatctttttaataatagtacttattaaacactcaatttctctaactca 34178333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 40999752 - 40999696
Alignment:
Q  164 cacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    |||||| ||||||||||  | | |||||| ||| |||||||||||||||||||||||    
T  40999752 cacaaatttcttaaatggaacccactaatcaaccatcaataactttatatcattata 40999696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 41000051 - 41000007
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    |||||||||||||||||||| |||||||| || |||| |||||||    
T  41000051 atacacatcatttatttatagttttttaaaagcagtatctaataa 41000007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 45135855 - 45135780
Alignment:
Q  144 tcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    |||||| ||| ||||| ||  |||||||| ||||||| || | || ||| |||||||||||||||||||||||||||    
T  45135855 tcactccaacccagatatcatacaaagtttttaaatg-gacccacaaatcaactatcaataactttatatcattata 45135780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 36657878 - 36657994
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||| ||| |||||||| ||||||||||||||||| || | |||||| ||||||||||    
T  36657878 atttataattttttaatagtactatctaataagcactcaatcactccaacccagatctcacacaaagttcttaaatgggacccactaatcaactatcaat 36657977  T
Q  204 aactttatatcattata 220  Q
    || |||||| |||||||    
T  36657978 aattttataccattata 36657994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 43302108 - 43302224
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||   ||||||| |||| | |||||||||| || | |||||| ||||||||||    
T  43302108 atttataattttttaatagtagtacctaataaatactcaatcactccaatctagatctcacacataattcttaaatgggacccactaatcaactatcaat 43302207  T
Q  204 aactttatatcattata 220  Q
    |||||||||||||||||    
T  43302208 aactttatatcattata 43302224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 36482001 - 36482112
Alignment:
Q  109 taattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactt 208  Q
    |||| ||||||||||||||  |||||| ||||||||||||||||| ||||| || |||||||||||||||||||||  |||||| |||||||||||||||    
T  36482001 taatattttaatagtagtatttaataagcactcaatcactctaacccagatatcacacaaagttcttaaatgagattcactaatcaactatcaataactt 36482100  T
Q  209 tatatcattata 220  Q
    ||||| ||||||    
T  36482101 tatataattata 36482112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 23156213 - 23156341
Alignment:
Q  87 acgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatct 186  Q
    |||| ||||||||||  ||||||| |||| ||||||||||| ||||||| |||| |||| ||| |||  ||||||| |||||||||||||||||||| |     
T  23156213 acgcgtacacatcatcaatttatagttttataatagtagtagctaataagcacttaatccctccaacctagatctcacacaaagttcttaaatgagaccc 23156312  T
Q  187 actaataaactatcaataactttatatca 215  Q
    | |||| ||||||||||||||||||||||    
T  23156313 attaatcaactatcaataactttatatca 23156341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 31330542 - 31330414
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactc-agatctctcacaaagttcttaaatgagatctact 189  Q
    |||||||||| | ||||||||||||||||| |||||||||||||| ||||||||| ||| ||| | | || || |||||| |||||||||||||  ||||    
T  31330542 atacacatcactcatttataattttttaatggtagtacctaataagcactcaatccctccaacccaacatttcacacaaatttcttaaatgagacgtact 31330443  T
Q  190 aataaactatcaataactttatatcatta 218  Q
    ||| |||||||||||| | ||||||||||    
T  31330442 aatcaactatcaataagtatatatcatta 31330414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 215
Target Start/End: Complemental strand, 37698610 - 37698511
Alignment:
Q  116 ttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatca 215  Q
    |||||||||||||||||||| ||||||||| ||| ||| || ||||| |||||| ||||||||||| | | |||||||||||||||| ||||||||||||    
T  37698610 ttaatagtagtacctaataagcactcaatccctccaacccaaatctcacacaaaattcttaaatgaaacccactaataaactatcaacaactttatatca 37698511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 4958388 - 4958258
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaac----tcagatctctcacaaagttcttaaatgagatcta 187  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| |||      | ||||| |||||  ||||||||||| | | |    
T  4958388 tacacatcattcatttataattttttaatagtagtatctaataaacactcaatccctccaaccgaacaacatctcacacaactttcttaaatgaaaccca 4958289  T
Q  188 ctaataaactatcaataactttatatcatta 218  Q
    | ||| ||||||||| |||||||||||||||    
T  4958288 caaatcaactatcaacaactttatatcatta 4958258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 19987306 - 19987179
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactc-agatctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||  ||   ||| ||| ||| | | ||||| ||||||||||||||||| || |||| |    
T  19987306 tacacatcattcatttataattttttaatagtagtacataataagtacatgatccctccaacccaacatctcacacaaagttcttaaatgggacctacaa 19987207  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    ||  |||||||||||||||| |||||||    
T  19987206 atcgactatcaataactttaaatcatta 19987179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 36656598 - 36656712
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaat 203  Q
    |||||||||||||||||||| ||| |||||||| |||||||| ||| || |   |||||  ||||||||||||||||||| | |  ||| |||||| |||    
T  36656598 atttataattttttaatagtggtatctaataaatactcaatccctccaattagtatctcatacaaagttcttaaatgagacccataaatcaactattaat 36656697  T
Q  204 aactttatatcatta 218  Q
    |||||||||||||||    
T  36656698 aactttatatcatta 36656712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 36901033 - 36901143
Alignment:
Q  112 ttttttaatagtagtacctaataaacact-caatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaataacttt 209  Q
    ||||||||||||||||||||||||| | | ||||| ||| |||  || ||||| || ||| ||||||||||||| |||||||| |||||||||||| |||    
T  36901033 ttttttaatagtagtacctaataaagaattcaatccctccaaccgagtatctcacaaaaatttcttaaatgagacctactaatcaactatcaataatttt 36901132  T
Q  210 atatcattata 220  Q
    |||||||||||    
T  36901133 atatcattata 36901143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 48767131 - 48767260
Alignment:
Q  92 tacacatcatttatttataatttttt-aatagtagtacctaataaac-actcaatcactctaactcag-atctctcaca-aagttcttaaatgagatcta 187  Q
    ||||||||| | |||||||||||||| |||||||||||||||||| | |||||||  |||||||  || ||||| || | || ||||||||||||| | |    
T  48767131 tacacatcactcatttataatttttttaatagtagtacctaataagccactcaatacctctaacctagtatctcacaaataatttcttaaatgagaccca 48767230  T
Q  188 ctaataaactatcaataactttatatcatt 217  Q
    ||||| ||||||||||||||||||||||||    
T  48767231 ctaatcaactatcaataactttatatcatt 48767260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 46282108 - 46282235
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    |||||||| || |||||||||||||||||||   |||||||||||||||  ||| ||| ||| ||| |||||   |||| ||||||||||||| | ||||    
T  46282108 tacacatcgttaatttataattttttaatagcgatacctaataaacactagatccctccaac-cagcatctcattcaaatttcttaaatgagacccacta 46282206  T
Q  191 ataaactatcaataactttatatcattat 219  Q
    || |||||||||||| |||||||||||||    
T  46282207 atcaactatcaataattttatatcattat 46282235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 44441738 - 44441611
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctacta 190  Q
    ||||||||| | ||||||||||||||||  ||||||||||||||  |||||||  ||| ||| ||| ||||| || ||| ||||||||||||| | ||||    
T  44441738 tacacatcactcatttataattttttaacggtagtacctaataagaactcaatatctccaacccagcatctcacaaaaatttcttaaatgagacccacta 44441639  T
Q  191 ataaactatcaataactttatatcatta 218  Q
    || ||||||||| ||||  |||||||||    
T  44441638 atcaactatcaacaactggatatcatta 44441611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 29914383 - 29914507
Alignment:
Q  96 catcatttatttataattttt-taatagtagtacctaataaacactcaatcactctaac-tcagatctctcacaaagttcttaaatgagatctactaata 193  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||| |||| ||| ||| | | ||||| |||||| ||| |||||| ||    |||||     
T  29914383 catcacttatttataatttttataatagtaatacctaataaacacttaatccctccaacttaacatctcacacaaatttcataaatgggactcgctaatc 29914482  T
Q  194 aactatcaataactttatatcatta 218  Q
    |||||||||||||||||||| ||||    
T  29914483 aactatcaataactttatattatta 29914507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 46748009 - 46748063
Alignment:
Q  91 atacacatcatttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  ||||||||    
T  46748009 atacacatcacttatttataattttttaatagtagcacctaataagaactcaatc 46748063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 30859734 - 30859633
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    ||||||||||||||  || | |||| | |||||||||||||||||||||||||| |||||  |||||||  ||| ||| |||||||| || ||| |||||    
T  30859734 aaatgggtcttacgtgtatatatcactcatttataattttttaatagtagtacccaataagtactcaattcctccaacccagatctcacaaaaatttctt 30859635  T
Q  176 aa 177  Q
    ||    
T  30859634 aa 30859633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 47841411 - 47841520
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctactaataaactatcaa 202  Q
    |||||||||||| |||||||||||  ||||||  |||||||| ||| |||  || ||||| || |||||||||||||||||   || ||| |||||||||    
T  47841411 atttataattttgtaatagtagtatttaataagtactcaatccctccaaccaagcatctcacataaagttcttaaatgagactcacaaatcaactatcaa 47841510  T
Q  203 taactttata 212  Q
    ||||||||||    
T  47841511 taactttata 47841520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 27334508 - 27334472
Alignment:
Q  102 ttatttataattttttaatagtagtacctaataaaca 138  Q
    |||||||||||||||||||||||||||||||||||||    
T  27334508 ttatttataattttttaatagtagtacctaataaaca 27334472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 13057950 - 13057892
Alignment:
Q  158 atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcat 216  Q
    ||||| |||||| |||||||||| ||  ||||||| |||||||||||||||||||||||    
T  13057950 atctcacacaaatttcttaaatgtgacttactaatcaactatcaataactttatatcat 13057892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 38224124 - 38223995
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttctt--aaatgagatctac 188  Q
    ||||||| ||||||||| |||||||| || ||||||||||||||  |||||||| ||  ||| ||| |||||  |||||||||||  ||||||||   |     
T  38224124 tacacatgatttatttagaattttttgatggtagtacctaataagtactcaatcccttcaacccagtatctcaaacaaagttcttaaaaatgagactcaa 38224025  T
Q  189 taataaactatcaataactttatatcatta 218  Q
     ||| ||||||||||||| |||||||||||    
T  38224024 aaatcaactatcaataacattatatcatta 38223995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 9429785 - 9429732
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||| | ||||||    
T  9429785 tacacaacattcatttataattttttaattgtagtacctaataaatattcaatc 9429732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 29770797 - 29770850
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatc 145  Q
    |||| ||||||||||||||| ||||||||||||||| ||  |||||||||||||    
T  29770797 tacaaatcatttatttataaatttttaatagtagtaacttgtaaacactcaatc 29770850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 15018443 - 15018399
Alignment:
Q  174 ttaaatgagatctactaataaactatcaataactttatatcatta 218  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||    
T  15018443 ttaaatgagatctactaatcaattatcaataactttatattatta 15018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 31322290 - 31322333
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  31322290 tacacatcactcatttataattttttaacagtagtacctaataa 31322333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 39853849 - 39853787
Alignment:
Q  158 atctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||| || ||| |||||||||| || | |||||| ||||||||||||||||||| |||||||    
T  39853849 atctcacaaaaatttcttaaatgggacccactaatcaactatcaataactttataccattata 39853787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 121
Target Start/End: Original strand, 19735863 - 19735892
Alignment:
Q  92 tacacatcatttatttataattttttaata 121  Q
    ||||||||||||||||||||||||||||||    
T  19735863 tacacatcatttatttataattttttaata 19735892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 38360778 - 38360815
Alignment:
Q  108 ataattttttaatagtagtacctaataaacactcaatc 145  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  38360778 ataattttttaatagtagtatctaataagcactcaatc 38360815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 5513823 - 5513951
Alignment:
Q  92 tacacatcatttatttataa-ttttttaatagtagtacctaataaacactcaatcactctaactcag-atctctcacaaagttcttaaatgagatctact 189  Q
    ||||||||| |||||||||| ||||||||||||| || |||||||   ||||||| ||| ||| | | ||||| | |||| || ||||||||||   |||    
T  5513823 tacacatcacttatttataatttttttaatagtaatatctaataagttctcaatccctccaaccccgtatctcacgcaaattttttaaatgagactcact 5513922  T
Q  190 aataaactatcaataactttatatcatta 218  Q
    |||  || |||||||||||||||| ||||    
T  5513923 aatcgaccatcaataactttatataatta 5513951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 43788670 - 43788614
Alignment:
Q  93 acacatcatttatttataattttttaatagtagtacctaataaacactcaatcactc 149  Q
    |||||||| ||||||||||||||||||||  |||||||| |||  ||||||| ||||    
T  43788670 acacatcacttatttataattttttaataaaagtacctattaaggactcaatgactc 43788614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 31764 - 31908
Alignment:
Q  76 aaatgggtcttacgcatacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttctt 175  Q
    |||||||||| | | || ||||||| | ||||||||||| |||||||||||| | ||||| || ||||| |||| ||| ||||| || ||||||||||||    
T  31764 aaatgggtctcatgtattcacatcactcatttataatttcttaatagtagtatcaaataagcattcaattactccaacccagatttcacacaaagttctt 31863  T
Q  176 aaatgagatctactaataaactatcaataactttatatcattata 220  Q
    ||||  ||   | |||| ||||| |||||||||||||| ||||||    
T  31864 aaataggactaagtaatcaactaacaataactttatatgattata 31908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 63685 - 63636
Alignment:
Q  104 atttataattttttaatagtagtacctaataaacactcaatcactctaac 153  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  63685 atttataattttttaatagtagtacctaataaggactcaatctctctaac 63636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 2073 - 2173
Alignment:
Q  115 tttaatagtagtacctaataaacactcaatcactctaactcagatctctcacaaagttcttaaatgagatctactaataaactatcaataactttatatc 214  Q
    |||||||||| || |||||||  | |||||| ||  |||| ||||||| ||||||||||||||||  |||  |||||| |||||| ||||||||||||||    
T  2073 tttaatagtaatagctaataagtattcaatcccttaaacttagatctcacacaaagttcttaaataggattcactaatcaactattaataactttatatc 2172  T
Q  215 a 215  Q
    |    
T  2173 a 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 59746 - 59700
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaaca 138  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||    
T  59746 tacacatcatttatttataattttttaatagcaatatctaataaaca 59700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 55753 - 55798
Alignment:
Q  90 catacacatcatttatttataattttttaatagtagtacctaataa 135  Q
    ||||||||||| | |||||||||||||||||| ||||| |||||||    
T  55753 catacacatcactcatttataattttttaatattagtagctaataa 55798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 1543 - 1483
Alignment:
Q  92 tacacatcatttatttataattttttaatagtagtacctaataaacactcaatcactctaa 152  Q
    ||||||| ||||||||||||||||||||||  |||| ||| |||| | ||||| |||||||    
T  1543 tacacattatttatttataattttttaataaaagtatctattaaagattcaatgactctaa 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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