View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20768_high_24 (Length: 255)
Name: NF20768_high_24
Description: NF20768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20768_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 15909088 - 15908860
Alignment:
| Q |
17 |
acagacactgaactagacattgacacttcgacaattgaatgtagcaacatatgtcgatgtcatgtcagtctcaaacaccagacacgacttcaatcagatt |
116 |
Q |
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| T |
15909088 |
acagacactgaactagacattgacacttcgacaattgaatgtagcaacatatgtcgatgtcatgtcagtctcaaacaccagacacgacttcaatcagatt |
15908989 |
T |
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| Q |
117 |
gaagtgtaggagatcataagactttaaattttagaccaagtaaatgtaatgtatcagacattattagatttgttagttagttagttaaatcagttaacaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
15908988 |
gaagtgtaggagatcataagactttaaattttagacctagtaaatgtaatgtaacagacattattagatttgttagttagttagttaaatcagttaagaa |
15908889 |
T |
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| Q |
217 |
acagtttacaattgttattaagttagtca |
245 |
Q |
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| T |
15908888 |
acagtttacaattgttattaagttagtca |
15908860 |
T |
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