View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20768_high_8 (Length: 440)

Name: NF20768_high_8
Description: NF20768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20768_high_8
NF20768_high_8
[»] chr1 (37 HSPs)
chr1 (181-433)||(50559918-50560183)
chr1 (196-433)||(4891012-4891260)
chr1 (181-433)||(15314121-15314384)
chr1 (196-433)||(29187227-29187475)
chr1 (196-433)||(29841805-29842053)
chr1 (196-433)||(33360614-33360863)
chr1 (181-429)||(51966854-51967114)
chr1 (196-433)||(10695309-10695557)
chr1 (196-433)||(13663534-13663783)
chr1 (196-433)||(18110600-18110849)
chr1 (196-433)||(28566836-28567085)
chr1 (196-433)||(43255672-43255921)
chr1 (196-433)||(50396086-50396335)
chr1 (181-319)||(31618557-31618695)
chr1 (181-433)||(42681264-42681522)
chr1 (191-319)||(38846468-38846596)
chr1 (196-319)||(18813101-18813224)
chr1 (181-319)||(34686455-34686593)
chr1 (196-319)||(41964174-41964297)
chr1 (196-433)||(52308718-52308966)
chr1 (196-433)||(52522687-52522936)
chr1 (196-319)||(34691008-34691131)
chr1 (196-319)||(41831299-41831422)
chr1 (196-319)||(48339276-48339399)
chr1 (196-319)||(49225160-49225283)
chr1 (198-319)||(18095697-18095816)
chr1 (18-89)||(15313069-15313140)
chr1 (339-433)||(18813256-18813350)
chr1 (339-433)||(21736711-21736805)
chr1 (339-433)||(31618727-31618820)
chr1 (339-433)||(34686625-34686718)
chr1 (339-433)||(38846342-38846436)
chr1 (339-433)||(48339431-48339525)
chr1 (339-433)||(41831174-41831267)
chr1 (359-433)||(18097674-18097748)
chr1 (339-433)||(34691163-34691257)
chr1 (339-433)||(41964049-41964142)
[»] scaffold0069 (1 HSPs)
scaffold0069 (181-433)||(12667-12929)
[»] chr5 (49 HSPs)
chr5 (181-433)||(25697647-25697910)
chr5 (196-433)||(34716500-34716747)
chr5 (181-319)||(3151860-3151998)
chr5 (196-433)||(19394329-19394578)
chr5 (196-433)||(31296662-31296911)
chr5 (181-433)||(3398463-3398727)
chr5 (196-319)||(7284517-7284640)
chr5 (196-319)||(30688156-30688279)
chr5 (196-319)||(34375657-34375780)
chr5 (181-319)||(4881110-4881248)
chr5 (181-433)||(12589409-12589667)
chr5 (196-433)||(289448-289697)
chr5 (196-315)||(20997198-20997317)
chr5 (196-319)||(27064742-27064865)
chr5 (196-319)||(37463240-37463363)
chr5 (181-319)||(3211453-3211591)
chr5 (196-433)||(3027299-3027549)
chr5 (196-314)||(41690187-41690305)
chr5 (196-319)||(33612395-33612518)
chr5 (196-319)||(35541116-35541239)
chr5 (196-319)||(26322330-26322452)
chr5 (196-319)||(30141415-30141538)
chr5 (196-294)||(2193627-2193725)
chr5 (181-319)||(1853174-1853311)
chr5 (181-287)||(19446969-19447075)
chr5 (339-433)||(30141571-30141665)
chr5 (339-433)||(3211327-3211421)
chr5 (339-433)||(34375531-34375625)
chr5 (339-433)||(35540990-35541084)
chr5 (339-433)||(41690340-41690434)
chr5 (339-433)||(21029101-21029195)
chr5 (339-433)||(1853048-1853142)
chr5 (339-433)||(3151734-3151828)
chr5 (339-433)||(20348935-20349029)
chr5 (339-433)||(19447126-19447220)
chr5 (339-433)||(27064897-27064991)
chr5 (339-429)||(4881280-4881370)
chr5 (339-433)||(7284672-7284766)
chr5 (258-319)||(20348847-20348908)
chr5 (339-433)||(20997074-20997163)
chr5 (339-433)||(26322205-26322298)
chr5 (339-433)||(30688311-30688404)
chr5 (339-433)||(2194161-2194254)
chr5 (339-433)||(33612269-33612363)
chr5 (181-231)||(18037358-18037408)
chr5 (196-228)||(12420344-12420376)
chr5 (339-385)||(37463395-37463441)
chr5 (290-319)||(2194100-2194129)
chr5 (196-228)||(21029048-21029080)
[»] chr2 (46 HSPs)
chr2 (196-433)||(10049116-10049365)
chr2 (196-433)||(4291769-4292017)
chr2 (181-433)||(28608118-28608382)
chr2 (181-433)||(18093845-18094109)
chr2 (196-433)||(6343845-6344094)
chr2 (196-433)||(14324329-14324578)
chr2 (196-433)||(16882842-16883091)
chr2 (196-433)||(17040532-17040781)
chr2 (181-433)||(42884287-42884550)
chr2 (196-433)||(1994057-1994306)
chr2 (196-433)||(28501191-28501440)
chr2 (196-319)||(21096610-21096733)
chr2 (181-319)||(4810443-4810581)
chr2 (196-319)||(3709820-3709943)
chr2 (196-319)||(11867473-11867596)
chr2 (196-319)||(26826437-26826560)
chr2 (196-319)||(30568113-30568236)
chr2 (196-319)||(35358866-35358989)
chr2 (196-433)||(9544744-9544995)
chr2 (196-319)||(19168875-19168998)
chr2 (196-319)||(26820529-26820652)
chr2 (196-315)||(36634338-36634457)
chr2 (196-319)||(45206214-45206337)
chr2 (181-319)||(33665022-33665160)
chr2 (196-319)||(14752080-14752202)
chr2 (339-433)||(33664896-33664990)
chr2 (341-433)||(9917825-9917917)
chr2 (339-433)||(14752234-14752328)
chr2 (339-433)||(30567987-30568081)
chr2 (339-433)||(36634209-36634303)
chr2 (339-433)||(4810613-4810707)
chr2 (339-433)||(19168749-19168843)
chr2 (339-433)||(26826592-26826686)
chr2 (339-433)||(33906336-33906430)
chr2 (196-302)||(7360941-7361047)
chr2 (196-273)||(33905206-33905283)
chr2 (344-433)||(7361057-7361146)
chr2 (236-319)||(9917951-9918034)
chr2 (339-433)||(26820684-26820778)
chr2 (339-433)||(45206088-45206182)
chr2 (339-433)||(21096765-21096858)
chr2 (270-319)||(33906255-33906304)
chr2 (339-385)||(3709975-3710021)
chr2 (339-385)||(11867395-11867441)
chr2 (339-385)||(35358788-35358834)
chr2 (359-433)||(11446731-11446807)
[»] chr7 (63 HSPs)
chr7 (196-433)||(17169938-17170186)
chr7 (196-424)||(33639832-33640070)
chr7 (196-433)||(6912479-6912728)
chr7 (196-433)||(47574457-47574706)
chr7 (181-433)||(9227357-9227621)
chr7 (196-319)||(19519477-19519600)
chr7 (181-319)||(42686432-42686570)
chr7 (196-428)||(47164697-47164942)
chr7 (196-319)||(14307809-14307932)
chr7 (196-319)||(19518903-19519026)
chr7 (196-319)||(29489853-29489976)
chr7 (196-319)||(33231208-33231331)
chr7 (181-319)||(5961562-5961700)
chr7 (196-433)||(47173368-47173614)
chr7 (196-433)||(3794391-3794634)
chr7 (196-319)||(8927153-8927276)
chr7 (196-319)||(19034908-19035031)
chr7 (196-319)||(19520051-19520174)
chr7 (196-319)||(20719605-20719728)
chr7 (196-319)||(20764275-20764398)
chr7 (196-319)||(34283351-34283474)
chr7 (181-433)||(42916713-42916977)
chr7 (181-319)||(31899041-31899179)
chr7 (196-319)||(23767699-23767821)
chr7 (196-314)||(27736315-27736433)
chr7 (196-319)||(11499510-11499633)
chr7 (181-433)||(48528887-48529150)
chr7 (196-319)||(39650201-39650324)
chr7 (181-299)||(9148255-9148373)
chr7 (339-433)||(9148394-9148488)
chr7 (339-433)||(31898913-31899007)
chr7 (339-433)||(39650074-39650168)
chr7 (339-433)||(5961732-5961826)
chr7 (339-433)||(17476934-17477028)
chr7 (339-433)||(17481380-17481474)
chr7 (339-433)||(17512576-17512670)
chr7 (339-433)||(17540544-17540638)
chr7 (339-433)||(17571740-17571834)
chr7 (339-433)||(17576186-17576280)
chr7 (339-433)||(42686602-42686696)
chr7 (252-319)||(4485910-4485977)
chr7 (256-319)||(17476838-17476901)
chr7 (256-319)||(17481284-17481347)
chr7 (256-319)||(17571867-17571930)
chr7 (256-319)||(17576313-17576376)
chr7 (339-433)||(19519058-19519152)
chr7 (339-433)||(19519632-19519726)
chr7 (339-433)||(19520206-19520300)
chr7 (339-433)||(23767574-23767667)
chr7 (344-431)||(4485786-4485873)
chr7 (339-433)||(27736191-27736278)
chr7 (256-319)||(17512481-17512544)
chr7 (256-319)||(17540670-17540733)
chr7 (339-433)||(14307964-14308057)
chr7 (339-394)||(11499665-11499720)
chr7 (339-433)||(8927028-8927121)
chr7 (339-385)||(19034830-19034876)
chr7 (339-385)||(20719760-20719806)
chr7 (339-385)||(20764430-20764476)
chr7 (339-385)||(29490008-29490054)
chr7 (339-385)||(33231130-33231176)
chr7 (339-385)||(34283273-34283319)
chr7 (196-253)||(42245910-42245967)
[»] chr6 (44 HSPs)
chr6 (196-433)||(1219436-1219684)
chr6 (196-433)||(24444839-24445087)
chr6 (196-433)||(9980188-9980435)
chr6 (181-433)||(33977813-33978077)
chr6 (196-433)||(13457852-13458101)
chr6 (196-319)||(1074529-1074652)
chr6 (196-319)||(7221602-7221725)
chr6 (196-319)||(18600252-18600375)
chr6 (181-433)||(34319934-34320198)
chr6 (181-319)||(22375112-22375250)
chr6 (196-319)||(14889204-14889327)
chr6 (196-319)||(248786-248909)
chr6 (196-319)||(15274461-15274584)
chr6 (181-433)||(25532112-25532376)
chr6 (196-319)||(34854814-34854937)
chr6 (181-319)||(17938365-17938503)
chr6 (196-319)||(12581044-12581167)
chr6 (196-433)||(3089172-3089419)
chr6 (196-319)||(1080855-1080979)
chr6 (181-319)||(11937052-11937190)
chr6 (196-319)||(7220059-7220182)
chr6 (198-319)||(2520017-2520145)
chr6 (339-433)||(1074403-1074497)
chr6 (339-433)||(7221757-7221851)
chr6 (339-433)||(15274616-15274710)
chr6 (196-302)||(11517657-11517763)
chr6 (339-433)||(17938536-17938630)
chr6 (339-433)||(18600126-18600220)
chr6 (339-433)||(4423397-4423491)
chr6 (339-433)||(22374986-22375080)
chr6 (344-433)||(11517558-11517647)
chr6 (339-433)||(7219933-7220027)
chr6 (339-433)||(11936926-11937020)
chr6 (359-423)||(33325611-33325675)
chr6 (339-422)||(14889090-14889172)
chr6 (339-433)||(2520177-2520270)
chr6 (196-302)||(11269587-11269693)
chr6 (359-423)||(35135277-35135341)
chr6 (339-433)||(34854969-34855062)
chr6 (262-319)||(4423308-4423365)
chr6 (339-385)||(248941-248987)
chr6 (339-433)||(1080731-1080823)
chr6 (339-385)||(12580966-12581012)
chr6 (181-228)||(3052136-3052183)
[»] scaffold0057 (1 HSPs)
scaffold0057 (196-433)||(19507-19754)
[»] chr4 (63 HSPs)
chr4 (181-433)||(35496661-35496925)
chr4 (196-433)||(52799938-52800185)
chr4 (196-433)||(15519741-15519990)
chr4 (196-433)||(17738935-17739183)
chr4 (181-319)||(19832659-19832797)
chr4 (181-319)||(23477782-23477920)
chr4 (196-433)||(741425-741674)
chr4 (196-319)||(5275018-5275141)
chr4 (196-319)||(13626945-13627068)
chr4 (196-319)||(55999972-56000095)
chr4 (196-319)||(10260580-10260703)
chr4 (196-319)||(21563752-21563875)
chr4 (196-319)||(24078650-24078773)
chr4 (196-319)||(26925522-26925645)
chr4 (196-319)||(28971986-28972109)
chr4 (196-319)||(43331273-43331396)
chr4 (196-319)||(51451339-51451462)
chr4 (181-319)||(575277-575415)
chr4 (181-319)||(14830783-14830921)
chr4 (200-431)||(16904172-16904415)
chr4 (181-319)||(34057837-34057975)
chr4 (181-319)||(39715770-39715908)
chr4 (181-319)||(40621024-40621162)
chr4 (196-433)||(47721211-47721460)
chr4 (196-319)||(15656084-15656207)
chr4 (196-319)||(28136328-28136451)
chr4 (196-433)||(35713259-35713502)
chr4 (181-319)||(19589725-19589863)
chr4 (197-319)||(36856024-36856146)
chr4 (181-319)||(53341287-53341425)
chr4 (181-319)||(33504260-33504398)
chr4 (181-319)||(39746118-39746256)
chr4 (196-319)||(7645384-7645507)
chr4 (196-319)||(1943392-1943515)
chr4 (339-433)||(40621194-40621288)
chr4 (339-433)||(39715644-39715738)
chr4 (341-433)||(575151-575243)
chr4 (339-433)||(55999846-55999940)
chr4 (339-433)||(7645258-7645352)
chr4 (339-433)||(28972141-28972235)
chr4 (343-433)||(19832533-19832623)
chr4 (339-433)||(39745992-39746086)
chr4 (339-433)||(53341457-53341551)
chr4 (340-433)||(19589896-19589989)
chr4 (340-433)||(28136202-28136295)
chr4 (339-433)||(13627100-13627194)
chr4 (339-433)||(15655958-15656052)
chr4 (196-302)||(16892042-16892148)
chr4 (339-433)||(33504134-33504228)
chr4 (339-428)||(1943547-1943636)
chr4 (339-433)||(14830658-14830751)
chr4 (339-433)||(54332788-54332882)
chr4 (339-433)||(23477952-23478045)
chr4 (339-433)||(5274893-5274986)
chr4 (339-433)||(34057712-34057805)
chr4 (339-385)||(10260502-10260548)
chr4 (339-385)||(21563907-21563953)
chr4 (339-385)||(24078572-24078618)
chr4 (339-385)||(26925444-26925490)
chr4 (339-385)||(43331428-43331474)
chr4 (339-385)||(51451494-51451540)
chr4 (344-421)||(16892158-16892235)
chr4 (339-385)||(36856178-36856224)
[»] chr3 (56 HSPs)
chr3 (196-433)||(8241580-8241829)
chr3 (196-433)||(16494755-16495004)
chr3 (196-433)||(5253374-5253623)
chr3 (196-319)||(52841780-52841903)
chr3 (181-319)||(51247230-51247368)
chr3 (196-433)||(36168584-36168833)
chr3 (196-433)||(54794086-54794335)
chr3 (196-319)||(6105372-6105495)
chr3 (196-319)||(31370275-31370398)
chr3 (181-319)||(11326900-11327038)
chr3 (181-319)||(17911009-17911147)
chr3 (196-433)||(2845879-2846128)
chr3 (196-433)||(35435850-35436099)
chr3 (196-319)||(917573-917696)
chr3 (196-319)||(44073968-44074091)
chr3 (196-319)||(48975557-48975680)
chr3 (196-319)||(54648768-54648891)
chr3 (196-319)||(55296037-55296160)
chr3 (181-319)||(35089093-35089231)
chr3 (196-319)||(21700816-21700939)
chr3 (181-429)||(40828063-40828323)
chr3 (196-319)||(49111947-49112070)
chr3 (196-319)||(52854699-52854822)
chr3 (181-319)||(11952535-11952673)
chr3 (181-433)||(22476572-22476830)
chr3 (196-319)||(39797588-39797711)
chr3 (183-319)||(12169192-12169328)
chr3 (196-319)||(16340548-16340668)
chr3 (196-315)||(23192406-23192525)
chr3 (339-433)||(12169066-12169160)
chr3 (343-433)||(11952409-11952499)
chr3 (339-433)||(16340700-16340794)
chr3 (339-429)||(39797466-39797556)
chr3 (339-433)||(51247400-51247494)
chr3 (339-433)||(55295911-55296005)
chr3 (339-433)||(23192561-23192655)
chr3 (339-433)||(49112104-49112198)
chr3 (339-428)||(50740393-50740482)
chr3 (339-428)||(50772372-50772461)
chr3 (344-433)||(52841654-52841743)
chr3 (339-431)||(17910885-17910977)
chr3 (341-433)||(21700690-21700782)
chr3 (341-429)||(52854577-52854665)
chr3 (362-433)||(28165211-28165282)
chr3 (339-433)||(11326774-11326868)
chr3 (339-433)||(35088967-35089061)
chr3 (339-433)||(54648642-54648736)
chr3 (256-319)||(50740297-50740360)
chr3 (256-319)||(50772494-50772557)
chr3 (196-250)||(18742115-18742169)
chr3 (339-433)||(48975712-48975806)
chr3 (340-433)||(6105247-6105339)
chr3 (339-433)||(31370150-31370243)
chr3 (339-385)||(917728-917774)
chr3 (339-385)||(44073890-44073936)
chr3 (125-169)||(8241506-8241550)
[»] chr8 (50 HSPs)
chr8 (181-319)||(14080076-14080214)
chr8 (196-433)||(23967508-23967757)
chr8 (196-433)||(37028587-37028836)
chr8 (196-433)||(42061782-42062031)
chr8 (196-433)||(44939192-44939441)
chr8 (181-433)||(12759108-12759372)
chr8 (196-431)||(44384062-44384309)
chr8 (196-319)||(19396593-19396715)
chr8 (196-319)||(30825074-30825197)
chr8 (181-433)||(39203245-39203509)
chr8 (196-433)||(41976087-41976335)
chr8 (196-319)||(44598394-44598517)
chr8 (196-433)||(41155260-41155508)
chr8 (196-319)||(20664174-20664297)
chr8 (196-319)||(22357691-22357814)
chr8 (196-319)||(30549540-30549663)
chr8 (196-319)||(33425501-33425624)
chr8 (196-319)||(36603314-36603437)
chr8 (196-319)||(41627521-41627644)
chr8 (196-319)||(41906477-41906600)
chr8 (196-319)||(44214290-44214413)
chr8 (196-319)||(6301720-6301843)
chr8 (181-319)||(42812196-42812334)
chr8 (198-319)||(27629302-27629423)
chr8 (181-433)||(45295172-45295436)
chr8 (339-433)||(6301594-6301688)
chr8 (339-433)||(36603188-36603282)
chr8 (339-433)||(44598550-44598644)
chr8 (339-433)||(6478611-6478705)
chr8 (339-433)||(19246886-19246980)
chr8 (339-433)||(19320070-19320164)
chr8 (339-433)||(22357565-22357659)
chr8 (339-433)||(14079950-14080044)
chr8 (339-433)||(42812070-42812164)
chr8 (339-433)||(41627676-41627770)
chr8 (339-433)||(27629455-27629549)
chr8 (339-433)||(33425377-33425470)
chr8 (339-433)||(41906632-41906726)
chr8 (275-319)||(19246810-19246854)
chr8 (275-319)||(19319994-19320038)
chr8 (181-249)||(29432925-29432993)
chr8 (339-385)||(20664096-20664142)
chr8 (339-385)||(30549462-30549508)
chr8 (196-229)||(38961187-38961220)
chr8 (196-229)||(38991532-38991565)
chr8 (339-433)||(30825229-30825319)
chr8 (341-385)||(44214212-44214256)
chr8 (388-429)||(19396488-19396529)
chr8 (279-319)||(6478736-6478776)
chr8 (125-169)||(39203186-39203230)
[»] scaffold0121 (1 HSPs)
scaffold0121 (191-319)||(16588-16716)
[»] scaffold0006 (3 HSPs)
scaffold0006 (196-433)||(153299-153548)
scaffold0006 (196-319)||(65885-66008)
scaffold0006 (339-428)||(65764-65853)
[»] scaffold0005 (2 HSPs)
scaffold0005 (196-319)||(8803-8926)
scaffold0005 (339-433)||(8958-9051)
[»] scaffold0010 (4 HSPs)
scaffold0010 (181-433)||(118901-119165)
scaffold0010 (238-310)||(118592-118664)
scaffold0010 (340-433)||(49896-49989)
scaffold0010 (340-433)||(57429-57522)
[»] scaffold0047 (2 HSPs)
scaffold0047 (181-319)||(27617-27755)
scaffold0047 (339-433)||(27492-27585)
[»] scaffold1884 (2 HSPs)
scaffold1884 (196-319)||(704-827)
scaffold1884 (362-433)||(862-933)
[»] scaffold0051 (3 HSPs)
scaffold0051 (196-319)||(48942-49065)
scaffold0051 (339-433)||(49097-49191)
scaffold0051 (196-225)||(64327-64356)
[»] scaffold0032 (4 HSPs)
scaffold0032 (196-319)||(5511-5634)
scaffold0032 (196-319)||(11960-12083)
scaffold0032 (374-433)||(5392-5451)
scaffold0032 (374-433)||(11841-11900)
[»] scaffold0045 (2 HSPs)
scaffold0045 (181-314)||(14109-14241)
scaffold0045 (340-433)||(13978-14071)
[»] scaffold0079 (2 HSPs)
scaffold0079 (197-319)||(13729-13851)
scaffold0079 (340-433)||(13601-13696)
[»] scaffold0009 (1 HSPs)
scaffold0009 (252-433)||(231552-231745)
[»] scaffold2007 (1 HSPs)
scaffold2007 (339-433)||(94-188)


Alignment Details
Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 50559918 - 50560183
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||| |   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  50559918 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctgttcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 50560017  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||||||||||||||| ||           ||||||||||            ||||||||||||||||||| ||||||||||    
T  50560018 tgcattatgatttcacaatacagtgttagagtaaattattatttcacaatctgatttgattggtttttgaccatgtttcttgaattgttatcgtgacctt 50560117  T
Q  369 aacatttctcaagctcaag-gtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50560118 aacacttctcaagctcaagagtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 50560183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 4891012 - 4891260
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  4891012 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 4891111  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||||| ||||||||||     
T  4891112 caatacagtgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 4891211  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  4891212 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 4891260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 15314121 - 15314384
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||| |||||||||||||||||||||||    
T  15314121 agtcaatggcaacctaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcattcggttgttaagaagtttaagacttaataagtt 15314220  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||| ||||||||||||||           ||||||||||            ||||||| ||||||||||| ||||||||||    
T  15314221 tgcattatgatttcacaatacaatgttagagtaacttattatttcacaatctgatttgattttttttttaccatgtt-cttgaattgttgtcgtgacctt 15314319  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15314320 aacacttctcaagttcaaggtcaaagcatcagtcaaaacttaagtcagagttcggcttcttctca 15314384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 29187475 - 29187227
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  29187475 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 29187376  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||||| ||||||||||     
T  29187375 caatacagtgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 29187276  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  29187275 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 29187227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 29842053 - 29841805
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||| |||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  29842053 aaatatatgtaacaattggttaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 29841954  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           || |||||||           | ||||||||||||||||| |||||||||||||| |||||||||||    
T  29841953 caatacagtgttagagtaaattattatttcacaatttgatttgattgtttttgactatgtttcttgaattgttgtcgtgaccttaacacttctcaagctc 29841854  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  29841853 agagtcaaagcatcagtctgaacttaagtcagagttcggcttcttctca 29841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 33360614 - 33360863
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  33360614 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 33360713  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||||| ||||||||||     
T  33360714 caatacagtgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 33360813  T
Q  385 aaggtc-aaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  33360814 agagtcaaaagcatcagtcagaacttaagtcagagttcgacttcttctca 33360863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 181 - 429
Target Start/End: Complemental strand, 51967114 - 51966854
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||| |||||||| ||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  51967114 agtcaatgacaacccaaatatatgtaacaattgatcaggttcaaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 51967015  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||||||||||||||| ||           ||||||||||            ||||||||||||||||||| ||||||||||    
T  51967014 tgcattatgatttcacaatacagtgttagagtaaattattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgacctt 51966915  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttctt 429  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  51966914 aacacttctcaagctcagagtcaaagcatcagtcagaacttaagtcagagttcgacttctt 51966854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 10695557 - 10695309
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||| ||||||||||||||| ||||||||  |||||||||||    
T  10695557 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgggaagtttaagacttagtaagtttgcgttatgatttca 10695458  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    |||||||||||||||| |||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  10695457 caatacagtgttagag-aacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 10695359  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||||||||||| |||||||||||||||||||||||||||||    
T  10695358 catagtcaaagcatcagtcaaaacttaagtcagagttcggcttcttctca 10695309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 13663783 - 13663534
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||| |||||||| |||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  13663783 aaatatatgtaacaattagtcaggtttgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 13663684  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  13663683 caatacagtgttagagtaacttattatttcacaatctgatttgattattttttgaccatgtttcttgaattgttatcgtgaccttaacacttctcaagct 13663584  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||||  |||||||||||||||| |||||||||||||||||||    
T  13663583 cagagtcaaagctacagtcagaacttaagttagagttcggcttcttctca 13663534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 18110600 - 18110849
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  18110600 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 18110699  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  18110700 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 18110799  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  18110800 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 18110849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 28567085 - 28566836
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||| |||  ||||   |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  28567085 aaatatatgtaacaattggtcaggtttgagcttgctcatcaacctacatcatccggttggtgagaagtttaagacttagtaagtttgcattatgatttca 28566986  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||||||           ||||||||||            ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  28566985 caatacagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttatcgtgacattaacacttctcaagct 28566886  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||||  ||||||||||||||||||||||||||||||||||||    
T  28566885 cagagtcaaagctacagtcagaacttaagtcagagttcggcttcttctca 28566836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 43255921 - 43255672
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  43255921 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 43255822  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  43255821 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 43255722  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  43255721 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 43255672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 50396335 - 50396086
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  50396335 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 50396236  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  50396235 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 50396136  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  50396135 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 50396086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 31618557 - 31618695
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31618557 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 31618656  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  31618657 tgcattatgatttcacaatacagtgttagagtaacttat 31618695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 42681264 - 42681522
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||     |||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  42681264 agtcaatgacaacccaaatatatgtaacaattggt-----tcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 42681358  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctta 369  Q
    || ||||||||||||||||||||||||||||||| ||           || |||||||           | ||||||||||||||||| |||||||||||    
T  42681359 tgcattatgatttcacaatacagtgttagagtaaattattatttcacaatttgatttgattgtttttgactatgtttcttgaattgttgtcgtgacctta 42681458  T
Q  370 acatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  42681459 acacttctcaagctcagagtcaaagcatcagtctgaacttaagtcagagttcggcttcttctca 42681522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 38846596 - 38846468
Alignment:
Q  191 aatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatga 290  Q
    |||| ||||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  38846596 aatccaaatatatgtaacaattggtcaggttcgaggcttctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatga 38846497  T
Q  291 tttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||||||||||||||    
T  38846496 tttcacaatacagtgttagagtaacttat 38846468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 18813101 - 18813224
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  18813101 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 18813200  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  18813201 caatacagtgttagagtaacttat 18813224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 34686455 - 34686593
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||||||||||| ||||||    
T  34686455 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatctggttgttgagaagtttaagacttagtaagtt 34686554  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  34686555 tgcattatgatttcacaatacagtgttagagtaacttat 34686593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 41964297 - 41964174
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  41964297 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatctggttgttgagaagtttaagacttagtaagtttgcattatgatttca 41964198  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  41964197 caatacagtgttagagtaacttat 41964174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 52308718 - 52308966
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||| ||||||||||||||||||||||||   |||||||||| ||||| |||||||||| ||||||||||| |||||||| ||||||||||||    
T  52308718 aaatatatgtagcaattggtcaggttcgaggctgctcatcaacctacattatccgattgttgagaaatttaagacttagtaagtttgaattatgatttca 52308817  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||| ||           ||||||||||            |||||||||||| | |||| |||||||||||||| ||||||||||    
T  52308818 caatacagtgttagagtaaattattattttccaatctgatttgattgttttttgaccatgtttcttgta-tgttgtcgtgaccttaacacttctcaagct 52308916  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||||||||| |||||||||||||||||| ||||||||||||    
T  52308917 cagagtcaaagcatcagttagaacttaagtcagagtttggcttcttctca 52308966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 52522936 - 52522687
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||    
T  52522936 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatctggttgttgagaaatttaagacttagtaagtttgcattatgatttca 52522837  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||||||||||||||||||||           ||||||||||            |||| |||||||||||||| ||||||| |||||| ||||||||||    
T  52522836 aaatacagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatatttcttgaattgttgtcgtgactttaacacttctcaagct 52522737  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||| | ||||| |||||||||||||||||||  ||||||||||    
T  52522736 cagagtcaaaacttcagttagaacttaagtcagagttcaacttcttctca 52522687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 34691008 - 34691131
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||| |||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  34691008 aaatatatgtaacaattggtaaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaaaacttagtaagtttgcattatgatttca 34691107  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||| ||||||||||||||||||    
T  34691108 caatatagtgttagagtaacttat 34691131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 41831422 - 41831299
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||| |||| ||||   ||||||||||||||| ||  ||||||||||||||||||| |||||||| ||||||||||||    
T  41831422 aaatatatgtaacaattggtcaggtttgaggttgctcatcaacctacatcatccagtgtttgagaagtttaagacttagtaagtttgcattatgatttca 41831323  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  41831322 caatacagtgttagagtaacttat 41831299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 48339276 - 48339399
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||| | |||||||||||||   ||||||||| |||||||||||||| |||||||||||||| ||| |||| ||||||||||||    
T  48339276 aaatatatgtaacaattggttaagttcgaggctgctcatcaacctacaacatccggttgttgataagtttaagacttagtaaatttgcattatgatttca 48339375  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  48339376 caatacagtgttagagtaacttat 48339399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 49225160 - 49225283
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||| || ||| | |||||||||||||||||||||| |||||||| ||||||||||||    
T  49225160 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctaaataatcagattgttgagaagtttaagacttagtaagtttgcattatgatttca 49225259  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  49225260 caatacattgttagagtaacttat 49225283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 18095697 - 18095816
Alignment:
Q  198 atatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttcaca 297  Q
    |||||| ||||||||||||||||| |||||||||   |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||| |||    
T  18095697 atatatttaacaattggtcaggtttgaggctgctcatcaacctacatcatctggttgttgagaagtttaagacttagtaagtttgcattatgattttaca 18095796  T
Q  298 atacagtgttagagtaacttat 319  Q
    |||||  |||||||||||||||    
T  18095797 ataca--gttagagtaacttat 18095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 15313069 - 15313140
Alignment:
Q  18 atgacacacaaagcttttcattggtctgtcagaacaccaaaaactcttgctcatatttaaggtcacagttac 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15313069 atgacacacaaagcttttcattggtctgtcagaacaccaaaaactcttgctcatatttaaggtcacagttac 15313140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 18813256 - 18813350
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  18813256 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaaacttcagttagaacttaagtcagagttcgacttcttctca 18813350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 21736711 - 21736805
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||  |||||||| ||||||||||||||||| ||||||  |||||||||||    
T  21736711 ccatgtttcttgaattgttgtcgtgaccttaacacttctaaagctcacagtcaaagcttcagtcagaacttaagttagagttatgcttcttctca 21736805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 31618727 - 31618820
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  31618727 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacttaagtcagagttcgacttcttctca 31618820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 34686625 - 34686718
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  34686625 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacttaagtcagagttcgacttcttctca 34686718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 38846436 - 38846342
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| | |||||||||||| |||| |||||||  |||||||| ||||| |||||||||||||||||| | ||||||||||    
T  38846436 ccatgtttcttgaattgttgttgtgaccttaacacttcttaagctcagagtcaaagcttcagttagaacttaagtcagagtttgacttcttctca 38846342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 48339431 - 48339525
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||| || ||||||| |||||||||||||| |||||||||| |  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  48339431 ccatgtttattaaattgttgtcgtgaccttaacacttctcaagcttagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 48339525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 41831267 - 41831174
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||  ||||||||||    
T  41831267 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacttaagtcagagttcaacttcttctca 41831174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 433
Target Start/End: Original strand, 18097674 - 18097748
Alignment:
Q  359 tcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||| ||||||||||||  |||||||  ||||||||||||||| |||| ||| | ||||||||||    
T  18097674 tcgtgaccttaacacttctcaagctcagagtcaaagtttcagtcagaacttaaatcagggtttgacttcttctca 18097748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 34691163 - 34691257
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||  ||||||| |||||| |||||||||| |  |||||| | | ||| ||||||||||||||||||   ||||||||||    
T  34691163 ccatgtttcttgaattgtagtcgtgactttaacacttctcaagctaagagtcaaaactttagttagaacttaagtcagagtttaacttcttctca 34691257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 41964142 - 41964049
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || |||  |||||| ||||||| ||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  41964142 ccatgtttcttgaattgttgtcatgattttaacacttctcaaactcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 41964049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 12667 - 12929
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  12667 agtcaatgacaacctaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 12766  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctta 369  Q
    || ||||||||||||||||||||||||||||||| ||           |||| |||||          | ||||||| |||||||||| |||||||||||    
T  12767 tgcattatgatttcacaatacagtgttagagtaaattattatttcacaatctaatttgattttttttac-catgtttattgaattgttgtcgtgacctta 12865  T
Q  370 acatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  12866 acacttctcaagcttagagtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 12929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 25697910 - 25697647
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  25697910 agtcaatggcaacctaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 25697811  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctta 369  Q
    || ||||||||||||||||||| ||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||    
T  25697810 tgcattatgatttcacaatacaatgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgtgacctta 25697711  T
Q  370 acatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  25697710 acacttctcaagcttagagtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 25697647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 34716500 - 34716747
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  34716500 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 34716599  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||          | |||||||||||||||||| |||||||||||||| ||||||||||     
T  34716600 caatacagtgttagagtaaattattatttcacaatctaatttgattttttttac-catgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 34716698  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  34716699 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 34716747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 3151998 - 3151860
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||  |||||    
T  3151998 agtcaatgacaatccaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagcaagtt 3151899  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  3151898 tgcattatgatttcacaatacagtgttagagtaacttat 3151860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 19394329 - 19394578
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19394329 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 19394428  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  19394429 aaatatagtattagagtaacttattatttcacaatctgatttgattattttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 19394528  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  19394529 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 19394578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 31296911 - 31296662
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  31296911 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 31296812  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  31296811 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 31296712  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  31296711 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 31296662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 3398727 - 3398463
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaatt-ggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagt 279  Q
    |||||| || |||| ||||||||||||||||| |||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||| |||||    
T  3398727 agtcaacgacaatccaaatatatgtaacaatttggtcaggttcgaggctgctcatcaacctacatcatccgattgttgagaagtttaagacttagtaagt 3398628  T
Q  280 ttgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    ||| |||||||||||| |||||||||||||| ||||||           ||| ||||||           ||||||||||||||||||| ||||||||||    
T  3398627 ttgcattatgatttcaaaatacagtgttagaataacttattatttcacaatccgatttgattttttttgaccatgtttcttgaattgttgtcgtgacctt 3398528  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||||||||  |||||||| |||||  ||||||||||||||||||| ||||||||||    
T  3398527 aacacttctcaagctcagagtcaaagcttcagttggaacttaagtcagagttcgacttcttctca 3398463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 7284517 - 7284640
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  7284517 aaatatatgtaacaattggtcaggttcgaggttgcttatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 7284616  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  7284617 caatacaatgttagagtaacttat 7284640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 30688156 - 30688279
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  30688156 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 30688255  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  30688256 caatacagtgttagagtaacttat 30688279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 34375780 - 34375657
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  34375780 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttaagaagtttaagacttagtaagtttgcattatgatttca 34375681  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  34375680 caatacagtgttagagtaacttat 34375657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 4881110 - 4881248
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||| ||||||    
T  4881110 agtcaatgataacccaaatatatgtaacaattggtcaggttcgaggctgctcatggacctacatcatccggttgttgagaagtttaagacttagtaagtt 4881209  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||| ||||||||||||||||||||||||||||||||    
T  4881210 tgcattttgatttcacaatacagtgttagagtaacttat 4881248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 12589667 - 12589409
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||     |||||||||||   |||||| ||| |||||||||||||||||||||||||||| ||||||    
T  12589667 agtcaatgacaacccaaatatatgtaacaattggt-----tcgaggctgctcatcaacctgcattatccggttgttgagaagtttaagacttagtaagtt 12589573  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctta 369  Q
    || ||||||||||||||||||||||||||||||| ||           || |||||||           | ||||||||||||||||| |||||||||||    
T  12589572 tgcattatgatttcacaatacagtgttagagtaaattattatttcacaatttgatttgattgtttttgactatgtttcttgaattgttgtcgtgacctta 12589473  T
Q  370 acatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12589472 acacttctcaagctcagagtcaaagcatcagtctgaacttaagtcagagttcggcttcttctca 12589409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 289448 - 289697
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||||||| |   |||||||||||||||| |||||||||||||||| ||||  |||||||| ||||||||||||    
T  289448 aaatatatgtaacaattggtcaggttcgaggctggtcatcaacctacatcatccgattgttgagaagtttaaaacttggtaagtttgcattatgatttca 289547  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| |||||||||| |||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  289548 aaatatagtgttagaggaacttattatttcacaatctgatttgattgttgtttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 289647  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||| ||||||||||||||||||||||||||| |||||||||    
T  289648 cagagtcaaagcttcagtcagaacttaagtcagagttcggtttcttctca 289697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 20997317 - 20997198
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  20997317 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacttacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 20997218  T
Q  296 caatacagtgttagagtaac 315  Q
    ||||||||||||||||||||    
T  20997217 caatacagtgttagagtaac 20997198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 27064742 - 27064865
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  27064742 aaatatatgtaacaattgatcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 27064841  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||| ||||    
T  27064842 caatacagtgttagagtaatttat 27064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 37463240 - 37463363
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  37463240 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 37463339  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  37463340 caatacagtgttagagtaacttat 37463363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 3211591 - 3211453
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  3211591 agtcaatgacaatccaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccagttattgagaagtttaagacttagtaagtt 3211492  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || |||||||||| |||||||||||||||||||||||||    
T  3211491 tgcattatgattttacaatacagtgttagagtaacttat 3211453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 3027299 - 3027549
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  3027299 aaatatatgtaacaattggttaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagactcagtaagtttgcattatgatttca 3027398  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnncc--ccatgtttcttgaattgttttcgtgaccttaacatttctcaagc 382  Q
    ||||||  ||||||||||||||           ||||||||||             ||||||||||||||||||| ||||||| |||||| ||||| |||    
T  3027399 caatacgatgttagagtaacttattatttcacaatctgatttgattgttttttttaccatgtttcttgaattgttgtcgtgacattaacacttctccagc 3027498  T
Q  383 tcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| |||||||| ||||| ||||||||||| |||||||  ||||||||||    
T  3027499 tcaaagtcaaagcttcagttagaacttaagttagagttcaacttcttctca 3027549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 41690187 - 41690305
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||| ||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  41690187 aaatatatgtaacaattggtcaggttcgaagctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 41690286  T
Q  296 caatacagtgttagagtaa 314  Q
    |||||||||||||||||||    
T  41690287 caatacagtgttagagtaa 41690305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 33612518 - 33612395
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||| ||||||||||| |||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  33612518 aaatatatataacaattggtaaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaaaacttagtaagtttgcattatgatttca 33612419  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  33612418 caatacagtgttagagtaacttat 33612395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 35541239 - 35541116
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||    
T  35541239 aaatatatgtaacaattagtcaggttcgaggctactcatcaacctacatcatccggttgttaagaagtttaagacttggtaagtttgcattatgatttca 35541140  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  35541139 caatacagtgttagagtaacttat 35541116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 26322452 - 26322330
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||| |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  26322452 aaatatatgtaacaattggtgaggttcgaggttgctcatcaacctacatcatccggttgt-gagaagtttaagacttagtaagtttgcattatgatttca 26322354  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  26322353 caatacaatgttagagtaacttat 26322330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 30141415 - 30141538
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||| ||| |||||||||||||||||||| ||   |||||||||| || ||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  30141415 aaatatatataataattggtcaggttcgaggctactcatcaacctacattattcggttgttgagaagtttaaaacttagtaagtttgcattatgatttca 30141514  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||| ||||    
T  30141515 caatacagtgttagagtaaattat 30141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 294
Target Start/End: Original strand, 2193627 - 2193725
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttc 294  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  2193627 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttc 2193725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 1853311 - 1853174
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||| |||||||||||||||  ||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||    
T  1853311 agtcaatgacaacccaaatat-tgtaacaattggtcatcttcgaggctgctcatcgacctacatcatccggttgttgagaagtttaagacttagtaagtt 1853213  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || |||||  |||||| ||||| ||||||||||||||||    
T  1853212 tgcattattttttcaccatacaatgttagagtaacttat 1853174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 19446969 - 19447075
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  19446969 agtcaatgacaacccaaatatatgtaacaattgttcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 19447068  T
Q  281 tgtatta 287  Q
    || ||||    
T  19447069 tgcatta 19447075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 30141571 - 30141665
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||    
T  30141571 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagcttagagtcaaagcatcaatcagaacttaagtcagagttcggcttcttctca 30141665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 3211421 - 3211327
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||    
T  3211421 ccatatttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagtcagaacttaagtcatagttcggcttcttctca 3211327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 34375625 - 34375531
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  34375625 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 34375531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 35541084 - 35540990
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| | |||||||||||||||||||||||||||||    
T  35541084 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttaaaacttaagtcagagttcggcttcttctca 35540990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 41690340 - 41690434
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| |  |||||||||||||| |||||||||||||||||||| ||||||||||    
T  41690340 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagcttagagtcaaagcatcagtaagaacttaagtcagagttcgacttcttctca 41690434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 21029101 - 21029195
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||| | ||||||||||    
T  21029101 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagtttgacttcttctca 21029195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 1853142 - 1853048
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  1853142 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcatagtcaaaacttcagttaaaacttaagtcagagttcgacttcttctca 1853048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 3151828 - 3151734
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||  |||||||| | ||| |||||||||||||||||||| ||||||||||    
T  3151828 ccatgtttcttgaattgttgtcgtggccttaacacttctcaagctcagagtcaaagctttagttagaacttaagtcagagttcgacttcttctca 3151734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 20348935 - 20349029
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||| ||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  20348935 ccatgtttcttgaattgttgtcgtgatcttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 20349029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 19447126 - 19447220
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||| |||||||| |||||||||||||| ||||| ||||||  |||||||  ||||| |||||||||||||||||||| ||||||||||    
T  19447126 ccatgtttctagaattgttgtcgtgaccttaacacttctccagctcagagtcaaagattcagttagaacttaagtcagagttcgacttcttctca 19447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 27064897 - 27064991
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||| ||||| | ||||||||||||  |||||||| ||||| ||||||| |||||||||||| ||||||||||    
T  27064897 ccatgtttcttgaattgttgtcgtgaacttaatacttctcaagctcagagtcaaagcttcagttagaacttcagtcagagttcgacttcttctca 27064991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 429
Target Start/End: Original strand, 4881280 - 4881370
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttctt 429  Q
    ||||||||||||||||||| || |||||||||||  |||||||||||  ||||||||  |||| |||||||||||||||||||| ||||||    
T  4881280 ccatgtttcttgaattgttgtcatgaccttaacaactctcaagctcagagtcaaagctccagttagaacttaagtcagagttcgacttctt 4881370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 7284672 - 7284766
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||| ||||||||||||||  ||||||||||    
T  7284672 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaaacttcagttagaatttaagtcagagttcaacttcttctca 7284766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 20348847 - 20348908
Alignment:
Q  258 agaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||    
T  20348847 agaagtttaagacttagtaagtttgcattatcatttcacaatacagtgttagagtaacttat 20348908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 20997163 - 20997074
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| |||||     ||||||| |||||||| ||||||||||    
T  20997163 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagt-----cttaagtaagagttcgacttcttctca 20997074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 26322298 - 26322205
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| | |||| ||||||||||||  ||||||   ||||| |||||||||||||||||||| ||||||||||    
T  26322298 ccatgtttcttgaattgttgtcgtgacttcaacacttctcaagctcagagtcaaa-attcagttagaacttaagtcagagttcgacttcttctca 26322205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 30688311 - 30688404
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  30688311 ccatgtttcttgaattgttgtcatgactttaacacttctcaagctcatagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 30688404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 2194161 - 2194254
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | ||||||||||| |||||| ||||||||||    
T  2194161 ccatgtttcttaaattgttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcaaagttcgacttcttctca 2194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 33612363 - 33612269
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| || ||| |||||||||| |  |||||| | | ||| ||||||||||||||||||   ||||||||||    
T  33612363 ccatgtttcttgaattgttgtcgtgacttttacacttctcaagctaagagtcaaaactttagttagaacttaagtcagagtttaacttcttctca 33612269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 18037408 - 18037358
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgct 231  Q
    ||||||||| || | |||||||||||||||||||||| |||||||||||||    
T  18037408 agtcaatgacaacccaaatatatgtaacaattggtcaagttcgaggctgct 18037358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 12420376 - 12420344
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggct 228  Q
    |||||||||||||||||||||||||||||||||    
T  12420376 aaatatatgtaacaattggtcaggttcgaggct 12420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 37463395 - 37463441
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||||    
T  37463395 ccatgtttcttgaattgttctcatgaacttaacacttctcaagctca 37463441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 2194100 - 2194129
Alignment:
Q  290 atttcacaatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||||||||    
T  2194100 atttcacaatacagtgttagagtaacttat 2194129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 21029048 - 21029080
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggct 228  Q
    ||||||||||||||||||||||||||| |||||    
T  21029048 aaatatatgtaacaattggtcaggttcaaggct 21029080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 8e-62; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 10049365 - 10049116
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10049365 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctatattatccggttgttgagaagtttaagacttagtaagtttgtattatgatttca 10049266  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||| ||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  10049265 caatacagtgttagagtaaattattatttcacaatctgatttgattgtttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 10049166  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
     |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  10049165 tagagtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 10049116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 4292017 - 4291769
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  4292017 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 4291918  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||| ||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||||| ||||||||||     
T  4291917 caatacattgttagagtaaattattattttacaatctaatttgatttctttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 4291818  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  4291817 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 4291769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 28608118 - 28608382
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| ||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  28608118 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctactcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 28608217  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||||||||||||||| ||           ||||||||||            ||||||||||||||||||||||||||||||    
T  28608218 tgcattatgatttcacaatacagtgttagagtaaattattatttgacaatctgatttgattgttttttgaccatgtttcttgaattgttttcgtgacctt 28608317  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||| || |  |||||||||||||||||||||||||||||||||| |||||||||||    
T  28608318 aacacttctcaaacttagagtcaaagcatcagtcagaacttaagtcagagttcagcttcttctca 28608382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 18094109 - 18093845
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  18094109 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 18094010  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||||||||||||||| ||           ||||||||||            ||||||||||||||||||| ||||||||||    
T  18094009 tgcattatgatttcacaatacagtgttagagtaaattattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgacctt 18093910  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| || |||||||||  |||||| |||||||||||||||||||||| ||||| ||||||||||    
T  18093909 aacacttatcaagctcagagtcaaaacatcagtcagaacttaagtcagggttcgacttcttctca 18093845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 6344094 - 6343845
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  6344094 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 6343995  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  6343994 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 6343895  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  6343894 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 6343845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 14324578 - 14324329
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  14324578 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 14324479  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  14324478 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 14324379  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  14324378 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 14324329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 16882842 - 16883091
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||    
T  16882842 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgccttatgatttca 16882941  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||| ||||||||||||||||           ||||||||||            ||||||||||||||||||| ||||| |||||| | ||||||||||    
T  16882942 caatatagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtggccttaaaacttctcaagct 16883041  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||| ||||||||||||||||||||||||||| |||||||||    
T  16883042 cagagtcaaagcttcagtcagaacttaagtcagagttcggtttcttctca 16883091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 17040532 - 17040781
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||    
T  17040532 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgccttatgatttca 17040631  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||| ||||||||||||||||           ||||||||||            ||||||||||||||||||| ||||| |||||| | ||||||||||    
T  17040632 caatatagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtggccttaaaacttctcaagct 17040731  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||| ||||||||||||||||||||||||||| |||||||||    
T  17040732 cagagtcaaagcttcagtcagaacttaagtcagagttcggtttcttctca 17040781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 42884287 - 42884550
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  42884287 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaaaacttagtaagtt 42884386  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctta 369  Q
    || ||||||||||||| ||||||||||||||||||||           ||| ||||||           ||||||||||||||||||| | |||||| ||    
T  42884387 tgcattatgatttcacgatacagtgttagagtaacttattatttcacaatccgatttgattgttttttaccatgtttcttgaattgttgttgtgaccgta 42884486  T
Q  370 acatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| |||| |||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  42884487 acacttcttaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 42884550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 1994306 - 1994057
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||| ||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  1994306 aaatataagtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 1994207  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  1994206 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 1994107  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  1994106 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 1994057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 28501191 - 28501440
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  28501191 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 28501290  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| | |||||||||||| ||||||||||    
T  28501291 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgttgtgaccttaacacttctcaagct 28501390  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  28501391 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 28501440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 21096610 - 21096733
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21096610 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 21096709  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  21096710 caatacagtgttagagtaacttat 21096733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 4810443 - 4810581
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||  |||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4810443 agtcaatggcaatccaaatatatgtgacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttattaagtt 4810542  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||| ||||||||||||||||    
T  4810543 tgcattatgatttcacaatacaatgttagagtaacttat 4810581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 3709820 - 3709943
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  3709820 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 3709919  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  3709920 caatacagtgttagagtaacttat 3709943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 11867596 - 11867473
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  11867596 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 11867497  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  11867496 caatacagtgttagagtaacttat 11867473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 26826437 - 26826560
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  26826437 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttaagaagtttaagacttagtaagtttgcattatgatttca 26826536  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||| ||||||||||    
T  26826537 caatacagtgttatagtaacttat 26826560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 30568236 - 30568113
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  30568236 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggatgttgagaagtttaagacttagtaagtttgcattatgatttca 30568137  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  30568136 caatacaatgttagagtaacttat 30568113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 35358989 - 35358866
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  35358989 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 35358890  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  35358889 caatacagtgttagagtaacttat 35358866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 9544995 - 9544744
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  9544995 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 9544896  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcg---tgaccttaacatttctcaag 381  Q
    ||||| ||||||||||||| ||           |||| |||||           ||||||||||||||||||| |||    |||||||||| ||||||||    
T  9544895 caatatagtgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgcgacgaccttaacacttctcaag 9544796  T
Q  382 ctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    || |  ||||||| ||||||||||||||||||||||||||  ||||||||||    
T  9544795 cttagagtcaaagtatcagtcagaacttaagtcagagttcaacttcttctca 9544744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 19168998 - 19168875
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||  |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19168998 aaatatatgtaacaattaatcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 19168899  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||| ||||||||||||||||||    
T  19168898 caataaagtgttagagtaacttat 19168875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 26820529 - 26820652
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| |||    |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  26820529 aaatatatgtaacaattggtcaggttcgaggttgcccatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 26820628  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  26820629 caatacagtgttagagtaacttat 26820652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 36634457 - 36634338
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||    
T  36634457 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatcctgttgttgataagtttaagacttagtaagtttgcattatgatttca 36634358  T
Q  296 caatacagtgttagagtaac 315  Q
    ||||||||||||||||||||    
T  36634357 caatacagtgttagagtaac 36634338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 45206337 - 45206214
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||| | |||||||||||||   ||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||    
T  45206337 aaatatatgtaacaattggttaagttcgaggctgctcatcaacctacatcatccagttgttgataagtttaagacttagtaagtttgcattatgatttca 45206238  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  45206237 caatacagtgttagagtaacttat 45206214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 33665160 - 33665022
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||| ||     |||||||||||||||| ||||||| |||||||||||||| ||||||    
T  33665160 agtcaatggtaacccaaatatatgtaacaattggtcaggttcgaggttgagcatcaacctacatcatccgattgttgataagtttaagacttagtaagtt 33665061  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||| |||||| |||||||||||||    
T  33665060 tgcattatgatttcacaaaacagtgctagagtaacttat 33665022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 14752080 - 14752202
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||| || ||| |||||||||||||||||||  |||||||| ||||||||||||    
T  14752080 aaatatatgtaacaattggtcaggttcgaggctggtcatcaacctacatcgtctggt-gttgagaagtttaagacttggtaagtttgcattatgatttca 14752178  T
Q  296 caatacagtgttagagtaacttat 319  Q
     |||||||||||||||||||||||    
T  14752179 aaatacagtgttagagtaacttat 14752202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 33664990 - 33664896
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  33664990 ccatgtttcttgaattgttgtcgtgaccttaacatttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 33664896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 9917917 - 9917825
Alignment:
Q  341 atgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  9917917 atgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagtatcagtctgaacttaagtcagagttcggcttcttctca 9917825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 14752234 - 14752328
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||||    
T  14752234 ccatgtttcttgaattattgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagtcagaacttaagttagagttcggcttcttctca 14752328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 30568081 - 30567987
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  30568081 ccatgtttcttgaattgttctcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 30567987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 36634303 - 36634209
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  36634303 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 36634209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 4810613 - 4810707
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||| || |||||||||||||| |||||||| |||  ||||||||  ||||||||||||||||||||||||||||||||||||    
T  4810613 ccatgtttcttgaattattatcgtgaccttaacacttctcaagatcagagtcaaagctacagtcagaacttaagtcagagttcggcttcttctca 4810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 19168843 - 19168749
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| | ||| |||||||||||||||||||| ||||||||||    
T  19168843 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttaagttagaacttaagtcagagttcgacttcttctca 19168749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 26826592 - 26826686
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  26826592 ccatgtttcttgaattattgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 26826686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 33906336 - 33906430
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| ||||||||||||||||||||  |||||||||    
T  33906336 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgatttcttctca 33906430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 7360941 - 7361047
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||| ||| |||||||||    ||||||||||| ||| ||||| |||||||||||||||  |||||||| ||||||||||||    
T  7360941 aaatatatgtaacaattggtcaagtttgaggctgctcattaacctacatcacccgattgtttagaagtttaagacttggtaagtttgcattatgatttca 7361040  T
Q  296 caataca 302  Q
    |||||||    
T  7361041 caataca 7361047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 33905206 - 33905283
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagactta 273  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||| ||||||||||||||||    
T  33905206 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatctggttgttaagaagtttaagactta 33905283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 344 - 433
Target Start/End: Original strand, 7361057 - 7361146
Alignment:
Q  344 tttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||| |||||||||||||||||| || |||||||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||    
T  7361057 tttcttgaatagttttcgtgaccttaacacttttcaagctcagagtcaaagcttcagtcataacttaagtcagggttcgacttcttctca 7361146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 9918034 - 9917951
Alignment:
Q  236 aacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    ||||||||| ||||||||||||| ||||||||  |||| |||||||| ||||||||||||||||| ||||||||||||| ||||    
T  9918034 aacctacattatccggttgttgataagtttaaatcttagtaagtttgcattatgatttcacaatagagtgttagagtaaattat 9917951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 26820684 - 26820778
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| |||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| ||||||||||||| |||||| ||||||||||    
T  26820684 ccatatttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaaacttcagttagaacttaagtcatagttcgacttcttctca 26820778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 45206182 - 45206088
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||| || || |||| |||||||||||||| ||||||||||||  |||||| | ||||  |||||||||||||||||||| ||||||||||    
T  45206182 ccatgtttatttaactgttgtcgtgaccttaacacttctcaagctcagagtcaaaacttcagatagaacttaagtcagagttcgacttcttctca 45206088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 21096765 - 21096858
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  21096765 ccatgtttcttaaattgttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 21096858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 33906255 - 33906304
Alignment:
Q  270 cttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  33906255 cttagtaagtttgcattatgatttcacaatacagtgttagagtaacttat 33906304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 3709975 - 3710021
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  3709975 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 3710021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 11867441 - 11867395
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  11867441 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 11867395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 35358834 - 35358788
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  35358834 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 35358788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 433
Target Start/End: Original strand, 11446731 - 11446807
Alignment:
Q  359 tcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaa--gtcagagttcggcttcttctca 433  Q
    |||||||||||||| ||||||||||||  |||||||| ||| | |||||||||  ||| ||||||| ||||||||||    
T  11446731 tcgtgaccttaacacttctcaagctcagagtcaaagcttcaattagaacttaagtgtctgagttcgacttcttctca 11446807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 3e-61; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 17169938 - 17170186
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  17169938 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 17170037  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||||| ||||||||||     
T  17170038 caatacagtgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 17170137  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17170138 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 17170186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 196 - 424
Target Start/End: Complemental strand, 33640070 - 33639832
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  33640070 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 33639971  T
Q  296 caatacagtgttagagtaact----------tatctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |           ||||||||||           ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  33639970 caatacagtgttagagtaattattatttcacaatctgatttgattgtttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctca 33639871  T
Q  386 aggtcaaagcatcagtcagaacttaagtcagagttcggc 424  Q
      |||||||||||||| ||||||||||||||||||||||    
T  33639870 gagtcaaagcatcagtaagaacttaagtcagagttcggc 33639832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 6912728 - 6912479
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  6912728 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 6912629  T
Q  296 caatacagtgttagagtaacttat-----------ctgatttgnnnnnnnnncc-ccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||||           ||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  6912628 aaatatagtattagagtaacttatcatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 6912529  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  6912528 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 6912479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 47574706 - 47574457
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  47574706 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 47574607  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  47574606 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 47574507  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  47574506 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 47574457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 9227621 - 9227357
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||| |   ||||||| ||||||| |||||||| ||||||||||||| |||||||    
T  9227621 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctggtcatcaacctagatcatccagttgttgaaaagtttaagacttgataagtt 9227522  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || |||||||||||| |||||||||||||||||||||           ||||||||||            ||||||||||||||||||| ||||||||||    
T  9227521 tgcattatgatttcaaaatacagtgttagagtaacttattatttcacaatctgatttgattgttgtttgaccatgtttcttgaattgttgtcgtgacctt 9227422  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||||||||  |||||||  ||||||||||||||||||| ||||||||||| |||||    
T  9227421 aacacttctcaagctcatagtcaaagtttcagtcagaacttaagtcaaagttcggcttcatctca 9227357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 19519477 - 19519600
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19519477 aaatatatgtaacaattggtcaggttcgaggctgctcgtcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 19519576  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||| ||| ||||    
T  19519577 caatacagtgttagaataagttat 19519600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 42686432 - 42686570
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  42686432 agtcaatgacaatccaaatatatgtaataattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 42686531  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||| | ||||||||||||||||    
T  42686532 tgcattatgatttcacaataaaatgttagagtaacttat 42686570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 196 - 428
Target Start/End: Complemental strand, 47164942 - 47164697
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| || |   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  47164942 aaatatatgtaacaattggtcaggttcgaggttgttcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 47164843  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnncc--ccatgtttcttgaattgttttcgtgaccttaacatttctcaagc 382  Q
    ||||||| ||||||||||||||           ||||||||||             ||||||||||||||||||| |||||||||||||| |||||||||    
T  47164842 caatacaatgttagagtaacttattatttcacaatctgatttgattgttttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagc 47164743  T
Q  383 tcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttct 428  Q
    | |  |||||||| |||||||||||||||||| |||||||| ||||    
T  47164742 ttagagtcaaagcttcagtcagaacttaagtcggagttcggtttct 47164697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 14307809 - 14307932
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||| ||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  14307809 aaatatatgtaacaattggtcgggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 14307908  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  14307909 caatacagtgttagagtaacttat 14307932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 19518903 - 19519026
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19518903 aaatatatgtaaaaattggtcaggttcgaggctgctcgtcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 19519002  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||| ||| ||||    
T  19519003 caatacagtgttagaataagttat 19519026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 29489853 - 29489976
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  29489853 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccgattgttgaaaagtttaagacttagtaagtttgtattatgatttca 29489952  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  29489953 caatacagtgttagagtaacttat 29489976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 33231331 - 33231208
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  33231331 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 33231232  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  33231231 caatacagtgttagagtaacttat 33231208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 5961562 - 5961700
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||| ||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  5961562 agtcaatgacaacccaaatacatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatgcggttgttgagaagtttaagacttagtaagtt 5961661  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || |||||||||||||||||||||||| |||||||||||    
T  5961662 tgcattatgatttcacaatacagtgtttgagtaacttat 5961700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 47173368 - 47173614
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||  |||||||||||||||||||| |||||   ||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  47173368 aaatatataaaacaattggtcaggttcgagactgctcatcaacctacaccatccggttgttgagaagtttaagacttagtaaatttgcattatgatttca 47173467  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||||||           ||||||||||            |||||||||||||||||||   |||||||||||| ||||||||||    
T  47173468 caatacagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgtt---gtgaccttaacacttctcaagct 47173564  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||| ||||||||||||||||| |||||||||||||||||||    
T  47173565 catagtcaaagcttcagtcagaacttaagttagagttcggcttcttctca 47173614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 3794391 - 3794634
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||     |||||||||||   |||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  3794391 aaatatatgtaacaattggt-----tcgaggctgctcatcaacctacattatctggttgttgagaagtttaagacttagtaagtttgcattatgatttca 3794485  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           || |||||||           | ||||||||||||||||| |||||||||||||| ||||| |||||    
T  3794486 caatacagtgttagagtaaattattatttcacaatttgatttgattgtttttgactatgtttcttgaattgttgtcgtgaccttaacacttctccagctc 3794585  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  3794586 agagtcaaagcatcagtctgaacttaagtcagagttcggcttcttctca 3794634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 8927276 - 8927153
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||| |||||| ||||   |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  8927276 aaatatatgtaacaattggtcaggctcgaggttgctcatcaacctacatcatccgtttgttgagaagtttaagacttagtaagtttgcattatgatttca 8927177  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  8927176 caatacagtgttagagtaacttat 8927153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 19035031 - 19034908
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||    
T  19035031 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccgattgttgaaaagtttaagacttagtaagtttgcattatgatttca 19034932  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  19034931 caatacagtgttagagtaacttat 19034908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 19520051 - 19520174
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||||||| |||||||||||||||||||||| |||||||  ||||||||||||    
T  19520051 aaatatatgtaacaattggtcaggttcgaggctgttcgtcaacctacatcatccgattgttgagaagtttaagacttagtaagtttccattatgatttca 19520150  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||| ||||||||||||||||||    
T  19520151 caatatagtgttagagtaacttat 19520174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 20719605 - 20719728
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||    
T  20719605 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccgattgttgaaaagtttaagacttagtaagtttgcattatgatttca 20719704  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  20719705 caatacagtgttagagtaacttat 20719728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 20764275 - 20764398
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  20764275 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 20764374  T
Q  296 caatacagtgttagagtaacttat 319  Q
    |||||| |||||||||||||||||    
T  20764375 caatactgtgttagagtaacttat 20764398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 34283474 - 34283351
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||    
T  34283474 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttggtaagtttgcattatgatttca 34283375  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  34283374 caatacagtgttagagtaacttat 34283351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 42916713 - 42916977
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||  |||||||||||| |   |||||||||| |||||||||||||||||||||||||||| | ||||    
T  42916713 agtcaatgacaacccaaatatatgtaacaattggtgtggttcgaggctgatcatcaacctacattatccggttgttgagaagtttaagacttagtcagtt 42916812  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgattt-gnnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||||||||||||||||||           ||||||||| |           ||| ||||||||||||||| |||||| |||    
T  42916813 tgcattatgatttcacaatacagtgttagagtaacttattatttcacaatctgatttggttgttttttgaccaagtttcttgaattgttgtcgtgaactt 42916912  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    || | ||||||||||||  ||||||||||||||||||||||| |||||||||| | |||||||||    
T  42916913 aaaacttctcaagctcatagtcaaagcatcagtcagaacttatgtcagagttcagtttcttctca 42916977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 31899179 - 31899041
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||||   |||||||||| || ||||||||||||||||||||||||| ||||||    
T  31899179 agtcaatggcaacctaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattattcggttgttgagaagtttaagacttagtaagtt 31899080  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||| ||||||||||| ||||    
T  31899079 tgcattatgatttcacaatacaatgttagagtaaattat 31899041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 23767821 - 23767699
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| || |   ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  23767821 aaatatatgtaacaattggtcaggttcgaggttggtcatcaacctacatcatccggttgt-gagaagtttaagacttagtaagtttgcattatgatttca 23767723  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  23767722 caatacagtgttagagtaacttat 23767699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 27736433 - 27736315
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| || ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  27736433 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattattcggttgttgagaagtttaagacttagtaagtttgcattatgatttca 27736334  T
Q  296 caatacagtgttagagtaa 314  Q
    ||||||| |||||||||||    
T  27736333 caatacactgttagagtaa 27736315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 11499510 - 11499633
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||| |||||||||||| ||||   ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||| |    
T  11499510 aaatatatgtaacaattgatcaggttcgaggttgctcatcaacctacatcattcggttgttgagaagtttaagacttagtaagtttgcattatgatttta 11499609  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  11499610 caatacaatgttagagtaacttat 11499633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 48529150 - 48528887
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||  ||||||| |||| || |   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  48529150 agtcaatgacaacccaaatatatgtaacaatttttcaggtttgaggttgttcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 48529051  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctta 369  Q
    || ||||||||||||||||| | ||||||||||| ||           |||| |||||           |||| |||||||||||||| ||| |||||||    
T  48529050 tgcattatgatttcacaatatattgttagagtaaattattatttcacaatctaatttgatttttttttaccatatttcttgaattgttgtcgcgacctta 48528951  T
Q  370 acatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| |||||||||| |  ||||||| |||||||||||||||||||||||||| |||||||||||    
T  48528950 acacttctcaagcttagagtcaaagtatcagtcagaacttaagtcagagttcagcttcttctca 48528887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 39650324 - 39650201
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||| |||||||||||||||||||||||| ||   |||||||||| || ||||||||||||||||||||||||| |||||||  ||||||||||||    
T  39650324 aaatatatataacaattggtcaggttcgaggctactcatcaacctacattattcggttgttgagaagtttaagacttagtaagtttacattatgatttca 39650225  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||| ||||    
T  39650224 caatacagtgttagagtaaattat 39650201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 9148255 - 9148373
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||| |||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  9148255 agtcaatgacaacccaaatttatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 9148354  T
Q  281 tgtattatgatttcacaat 299  Q
    || ||||| ||||||||||    
T  9148355 tgcattattatttcacaat 9148373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 9148394 - 9148488
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  9148394 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaaactcagagtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 9148488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 31899007 - 31898913
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||    
T  31899007 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagcttagagtcaaagcatcagtcataacttaagtcagagttcggcttcttctca 31898913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 39650168 - 39650074
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||    
T  39650168 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagcttagagtcaaagcatcaatcagaacttaagtcagagttcggcttcttctca 39650074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 5961732 - 5961826
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  || ||||| ||||| |||||||||||||||||||| ||||||||||    
T  5961732 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagttaaagcttcagttagaacttaagtcagagttcgacttcttctca 5961826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 17476934 - 17477028
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17476934 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 17477028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 17481380 - 17481474
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17481380 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 17481474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 17512576 - 17512670
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17512576 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 17512670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 17540638 - 17540544
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17540638 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 17540544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 17571834 - 17571740
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17571834 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 17571740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 17576280 - 17576186
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17576280 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 17576186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 42686602 - 42686696
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| || || |||||||||||||||||||| ||||||||||    
T  42686602 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttctgttagaacttaagtcagagttcgacttcttctca 42686696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 4485977 - 4485910
Alignment:
Q  252 ttgttgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  4485977 ttgttgagaagtttaagacttagtaagtttgcattatgatttcacaatatagtgttagagtaacttat 4485910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17476838 - 17476901
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  17476838 tgagaagtttaagacttagtaagtttgcattatgatttcacaatacagtgttagagtaacttat 17476901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17481284 - 17481347
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  17481284 tgagaagtttaagacttagtaagtttgcattatgatttcacaatacagtgttagagtaacttat 17481347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 17571930 - 17571867
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  17571930 tgagaagtttaagacttagtaagtttgcattatgatttcacaatacagtgttagagtaacttat 17571867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 17576376 - 17576313
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  17576376 tgagaagtttaagacttagtaagtttgcattatgatttcacaatacagtgttagagtaacttat 17576313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 19519058 - 19519152
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||| | |||||||| |||||||||||||| ||||||||||||| |||||||  ||||| ||||||||||||||| |||| ||||||||||    
T  19519058 ccatgtttatagaattgttgtcgtgaccttaacacttctcaagctcaaagtcaaagattcagttagaacttaagtcagaattcgacttcttctca 19519152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 19519632 - 19519726
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||| | |||||||| |||||||||||||| ||||||||||||| |||||||  ||||| ||||||||||||||| |||| ||||||||||    
T  19519632 ccatgtttatagaattgttgtcgtgaccttaacacttctcaagctcaaagtcaaagattcagttagaacttaagtcagaattcgacttcttctca 19519726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 19520206 - 19520300
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||  |||||||  ||||| ||||||||||||||| |||| ||||||||||    
T  19520206 ccatgtttcttgaattgttgtcatgaccttaacacttctcaagctcagagtcaaagattcagttagaacttaagtcagaattcgacttcttctca 19520300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 23767667 - 23767574
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  23767667 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacttaagtcagagttcgacttcttctca 23767574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 431
Target Start/End: Complemental strand, 4485873 - 4485786
Alignment:
Q  344 tttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttct 431  Q
    ||||||||||| || |||||||| ||||| ||||||||||||  |||||||| ||| ||||||||||||||||||||| |||||||||    
T  4485873 tttcttgaattattgtcgtgaccataacacttctcaagctcagagtcaaagcttcaatcagaacttaagtcagagttcagcttcttct 4485786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 27736278 - 27736191
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| | |||||||||||| ||||||||       |||||||||||||||||||| |||||| |||||||||||||||||    
T  27736278 ccatgtttcttgaattgttgttgtgaccttaacaattctcaag-------tcaaagcatcagtcagaactaaagtcacagttcggcttcttctca 27736191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 17512481 - 17512544
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||    
T  17512481 tgagaagtttaagacttagtaagtttgcattaagatttcacaatatagtgttagagtaacttat 17512544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 17540733 - 17540670
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||    
T  17540733 tgagaagtttaagacttagtaagtttgcattaagatttcacaatatagtgttagagtaacttat 17540670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 14307964 - 14308057
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  14307964 ccatgtttcttgaattgttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 14308057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 394
Target Start/End: Original strand, 11499665 - 11499720
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaag 394  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||    
T  11499665 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaag 11499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 8927121 - 8927028
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | |||||||| |||||| || ||||||||||    
T  8927121 ccatgtttcttaaattgttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagccagagtccgacttcttctca 8927028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 19034876 - 19034830
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  19034876 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 19034830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 20719760 - 20719806
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  20719760 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 20719806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 20764430 - 20764476
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  20764430 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 20764476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 29490008 - 29490054
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  29490008 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 29490054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 33231176 - 33231130
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  33231176 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 33231130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 34283319 - 34283273
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  34283319 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 34283273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 42245967 - 42245910
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggtt 253  Q
    ||||||||| |||||||||||||||| |||||| ||   |||| ||||||||||||||    
T  42245967 aaatatatgcaacaattggtcaggtttgaggcttctcatcaacttacatcatccggtt 42245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 1219436 - 1219684
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  1219436 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 1219535  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||||| ||||||||||     
T  1219536 caatacagtgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 1219635  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  1219636 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 1219684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 24444839 - 24445087
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  24444839 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 24444938  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||           ||||||||||||||||||| |||||||||||||| ||||||||||     
T  24444939 caatacagtgttagagtaaattattatttcacaatctaatttgatttttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 24445038  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  24445039 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 24445087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 9980435 - 9980188
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  9980435 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 9980336  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||          | |||||||||||||||||| |||||||||||||| ||||||||||     
T  9980335 caatacagtgttagagtaaattattatttcacaatctaatttgattttttttac-catgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 9980237  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9980236 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 9980188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 33977813 - 33978077
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    |||||||| ||| | ||||| |||||||||||||||||||||||||||| |   |||||||||||||||||||||||| |||||||||||||| ||||||    
T  33977813 agtcaatggtaacccaaatagatgtaacaattggtcaggttcgaggctgttcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtt 33977912  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||||||||||||||||||           ||||||||||            |||||||||||||||||||||||||| |||    
T  33977913 tgcattatgatttcacaatacagtgttagagtaacttattatttcacaatctgatttgattgtttattgaccatgtttcttgaattgttttcgtgaactt 33978012  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||||||||  |||||||| || |||| ||||||||| |||||||||||||||||||    
T  33978013 aacacttctcaagctcagagtcaaagcttccgtcataacttaagtgagagttcggcttcttctca 33978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 13458101 - 13457852
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  13458101 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 13458002  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  13458001 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 13457902  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  13457901 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 13457852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 1074652 - 1074529
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  1074652 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 1074553  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  1074552 caatacagtgttagagtaacttat 1074529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 7221602 - 7221725
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  7221602 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 7221701  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  7221702 caatacagtgttagagtaacttat 7221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 18600375 - 18600252
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  18600375 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 18600276  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  18600275 caatacagtgttagagtaacttat 18600252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 34319934 - 34320198
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    |||||||| ||| | |||||||||||| ||||||| ||||||||||||| |   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  34319934 agtcaatggtaacccaaatatatgtaagaattggttaggttcgaggctgatcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 34320033  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||| ||||||||||||||||           ||||||||||            ||| ||||||||||||||| ||||||||||    
T  34320034 tgcattatgatttcacaatagagtgttagagtaacttactatttcacaatctgatttgattgttttttgaccaagtttcttgaattgttgtcgtgacctt 34320133  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    || | ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  34320134 aaaacttctcaagctcagagtcaaagcatcagtcagaacttaagtcagagttcggtttcttctca 34320198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 22375250 - 22375112
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  22375250 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctgcacatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 22375151  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  22375150 tgcattatgatttcacaatacagtgttagagtaacttat 22375112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 14889327 - 14889204
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  14889327 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 14889228  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  14889227 caatacagtgttagagtaacttat 14889204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 248786 - 248909
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  248786 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 248885  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  248886 caatacagtgttagagtaacttat 248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 15274461 - 15274584
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||| |||||||||   |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  15274461 aaatatatgtaacaattggtcaggtttgaggctgctcatcaacctacatcatcaggttgttgagaagtttaagacttagtaagtttgcattatgatttca 15274560  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  15274561 caatacagtgttagagtaacttat 15274584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 25532112 - 25532376
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   ||||||| || |||| ||||||||||||||||| ||||| ||||||    
T  25532112 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggatgctcatcaacctaaattatccagttgttgagaagtttaaaacttagtaagtt 25532211  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || || |||||||||||||||||||||||||||| ||           ||||||||||            ||||||||||||||||||| ||||| ||||    
T  25532212 tgcataatgatttcacaatacagtgttagagtaaattattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtggcctt 25532311  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    || ||||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||    
T  25532312 aatatttctcaagctcagaatcaaagcatcagtcagaacttaagtcagagttcagcttcttctca 25532376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 34854814 - 34854937
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  34854814 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctccatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 34854913  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  34854914 caatacagtgttagagtaacttat 34854937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 17938365 - 17938503
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  17938365 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctgctcattaacctacatcatccgattgttgagaagtttaagacttagtaagtt 17938464  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |  ||||||||||||||||||||||||||||||||||||    
T  17938465 tacattatgatttcacaatacagtgttagagtaacttat 17938503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 12581167 - 12581044
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| |||||||||||||||| |||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  12581167 aaatagatgtaacaattggtcaagttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 12581068  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  12581067 caatacagtgttagagtaacttat 12581044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 3089419 - 3089172
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||| || ||| |||| ||||||||||||||||||| |||||||| ||||||||||||    
T  3089419 aaataaatgtaacaattggtcaggttcgaggctgctcatcaacctaaataatcaggttattgagaagtttaagacttagtaagtttgcattatgatttca 3089320  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||  ||||||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| |||||| |||    
T  3089319 caat--agtgttagagtaacttattatttcataatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaggct 3089222  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||| | |||||||||||||||||||||||||||||||||||||    
T  3089221 catagtcaaaacttcagtcagaacttaagtcagagttcggcttcttctca 3089172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 1080979 - 1080855
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcga-ggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttc 294  Q
    ||||||||||||||||||||||||||||| || ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  1080979 aaatatatgtaacaattggtcaggttcgacggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttc 1080880  T
Q  295 acaatacagtgttagagtaacttat 319  Q
    |||||||| ||||||||||||||||    
T  1080879 acaatacattgttagagtaacttat 1080855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 11937190 - 11937052
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| ||| ||    
T  11937190 agtcaatgaaaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaattt 11937091  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||| |||||| |||| ||||||||||||||||||    
T  11937090 tgcattattatttcataatatagtgttagagtaacttat 11937052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 7220182 - 7220059
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||| |||| ||||||||||  |   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  7220182 aaatatatgtaacaattagtcaagttcgaggctaatcatcaacctacataatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 7220083  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  7220082 caatacagtgttagagtaacttat 7220059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 2520017 - 2520145
Alignment:
Q  198 atatatgtaacaattggtcaggttcgaggctgcttgccaacctac-------atcatccggttgttgagaagtttaagacttaataagtttgtattatga 290  Q
    ||||||||||||||||||||||||||||| ||||   ||||||||       ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  2520017 atatatgtaacaattggtcaggttcgaggttgctcatcaacctacaatctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatga 2520116  T
Q  291 tttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||||||||||||||    
T  2520117 tttcacaatacagtgttagagtaacttat 2520145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 1074497 - 1074403
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  1074497 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 1074403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 7221757 - 7221851
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  7221757 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 7221851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 15274616 - 15274710
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||  ||||| |||||||||||||||||||| ||||||||||    
T  15274616 ccatgtttcttgaattgttgtcgtgaccttaacatttctcaagttcaaagtcaaagtttcagttagaacttaagtcagagttcgacttcttctca 15274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 302
Target Start/End: Complemental strand, 11517763 - 11517657
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||| ||| |||||||||    ||||||||||| ||| ||||| ||||||||||||||| ||||||||| ||||||||||||    
T  11517763 aaatatatgtaacaattggtcaagtttgaggctgctcattaacctacatcacccgattgtttagaagtttaagacttgataagtttgcattatgatttca 11517664  T
Q  296 caataca 302  Q
    |||||||    
T  11517663 caataca 11517657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 17938536 - 17938630
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  17938536 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaaacttcagttagaacttaagtcagagttcgacttcttctca 17938630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 18600220 - 18600126
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  18600220 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaaacttcagttagaacttaagtcagagttcgacttcttctca 18600126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 4423397 - 4423491
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||||| ||||| ||||||||||||| |||||| ||||||||||    
T  4423397 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcaaagttcgacttcttctca 4423491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 22375080 - 22374986
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||  ||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  22375080 ccatgtttcttgaattgttgtcgtgacactaacacttctcaagctcagagtcaaaacttcagttagaacttaagtcagagttcgacttcttctca 22374986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 344 - 433
Target Start/End: Complemental strand, 11517647 - 11517558
Alignment:
Q  344 tttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||| |||||||||||||||||| || |||||||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||    
T  11517647 tttcttgaatagttttcgtgaccttaacacttttcaagctcagagtcaaagcttcagtcataacttaagtcagggttcgacttcttctca 11517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 7220027 - 7219933
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||| || ||||||| |||||||||||||  ||||||||||||  | |||||| ||||| |||||||||||||||||||| ||||||||||    
T  7220027 ccatgtttatttaattgttgtcgtgaccttaacgcttctcaagctcagagccaaagcttcagttagaacttaagtcagagttcgacttcttctca 7219933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 11937020 - 11936926
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| || |||||||||  |||||| | ||||| |||||||||||||||||||  ||||||||||    
T  11937020 ccatgtttcttgaattgttgtcgtgactttaacacttttcaagctcagagtcaaaacttcagttagaacttaagtcagagttcaacttcttctca 11936926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 33325675 - 33325611
Alignment:
Q  359 tcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcgg 423  Q
    |||||||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  33325675 tcgtgaccttaacacttctcaagctcagagtcaaagcatgagtcagaacttaagtcagagttcgg 33325611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 422
Target Start/End: Complemental strand, 14889172 - 14889090
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcg 422  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||||  |||||| | ||||| ||||||||||||||||||||    
T  14889172 ccatgtttcttgaactgttttcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacttaagtcagagttcg 14889090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 2520177 - 2520270
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||| || ||||||||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  2520177 ccatgtttcttaaattgttgtcatgaccttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 2520270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 11269587 - 11269693
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||| ||| |||| ||||    ||||||||||| ||| ||||| | |||||||||||||  |||||||| ||||||||||||    
T  11269587 aaatatatgtaacaattggtcaagtttgaggttgctcattaacctacatcacccgattgtttaaaagtttaagacttggtaagtttgcattatgatttca 11269686  T
Q  296 caataca 302  Q
     ||||||    
T  11269687 gaataca 11269693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 35135277 - 35135341
Alignment:
Q  359 tcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcgg 423  Q
    |||||||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||    
T  35135277 tcgtgaccttaacacttctcaagctcagagtcaaagcatgagtcagaacttaaatcagagttcgg 35135341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 34854969 - 34855062
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||| ||||||| |||||| |||||||||| |  |||||| | ||||| ||||||||||||||| |||| ||||||||||    
T  34854969 ccatgtttcttaaattgttgtcgtgactttaacacttctcaagcttagagtcaaa-cttcagttagaacttaagtcagaattcgacttcttctca 34855062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 4423308 - 4423365
Alignment:
Q  262 gtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||    
T  4423308 gtttaagacttagtaagtttgcattatgatttcacaatagaatgttagagtaacttat 4423365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 248941 - 248987
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  248941 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 248987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 1080823 - 1080731
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||| || |||| |||||| ||||||||||||  ||||||   ||||| | |||||||||||||||||| ||||||||||    
T  1080823 ccatgtttctt-aattgttgtcatgactttaacacttctcaagctcagagtcaaatt-tcagttaaaacttaagtcagagttcgacttcttctca 1080731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 12581012 - 12580966
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  12581012 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 12580966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 3052183 - 3052136
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggct 228  Q
    ||||||||| || | |||||||||||||||||||||| ||||||||||    
T  3052183 agtcaatgacaaccaaaatatatgtaacaattggtcaagttcgaggct 3052136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 19754 - 19507
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19754 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 19655  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||          | |||||||||||||||||| |||||||||||||| ||||||||||     
T  19654 caatacagtgttagagtaaattattatttcacaatctaatttgatttttttttc-catgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 19556  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  19555 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 19507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 7e-59; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 35496925 - 35496661
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||||||||| |||| ||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  35496925 agtcaatgacaacccaaatatatgtaacaattggtcaggtttgaggttgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 35496826  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||| ||||||||||| ||           ||||||||||            ||||||||||||||||||| ||||||||||    
T  35496825 tgcattatgatttcacaatacaatgttagagtaaattattatttcacaatctgatttgattggttttttaccatgtttcttgaattgttgtcgtgacctt 35496726  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  35496725 aacacttctcaagctcagagtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 35496661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 52799938 - 52800185
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  52799938 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 52800037  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           |||| |||||          | |||||||||||||||||| |||||||||||||| ||||||||||     
T  52800038 caatacagtgttagagtaaattattatttcacaatctaatttgattttttttac-catgtttcttgaattgttgtcgtgaccttaacacttctcaagctt 52800136  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  52800137 agagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 52800185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 15519741 - 15519990
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15519741 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 15519840  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  15519841 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 15519940  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  15519941 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 15519990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 17738935 - 17739183
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  17738935 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggtagttgagaagtttaagacttagtaagtttgcattatgatttca 17739034  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    | ||||||||||||||||| ||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  17739035 c-atacagtgttagagtaaattattatttcacaatctgatttgattgtttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 17739133  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||||||||||  ||||||||||||||||||||||||||||||    
T  17739134 cagagtcaaagcatcagtatgaacttaagtcagagttcggcttcttctca 17739183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 19832797 - 19832659
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  19832797 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 19832698  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||| ||||||||||    
T  19832697 tgcattatgatttcacaatacagtgttacagtaacttat 19832659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 23477782 - 23477920
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  23477782 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 23477881  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  23477882 tgcattatgatttcacaatacagtgttagagtaacttat 23477920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 741674 - 741425
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  741674 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 741575  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  741574 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 741475  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  | ||||| |||||||| ||||||||| |||||||||||||||||||    
T  741474 cagaggcaaagtatcagtcataacttaagttagagttcggcttcttctca 741425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 5275141 - 5275018
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  5275141 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 5275042  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  5275041 caatacagtgttagagtaacttat 5275018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 13626945 - 13627068
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  13626945 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 13627044  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  13627045 caatacattgttagagtaacttat 13627068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 56000095 - 55999972
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  56000095 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 55999996  T
Q  296 caatacagtgttagagtaacttat 319  Q
    || |||||||||||||||||||||    
T  55999995 cagtacagtgttagagtaacttat 55999972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 10260703 - 10260580
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  10260703 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 10260604  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  10260603 caatacagtgttagagtaacttat 10260580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 21563752 - 21563875
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  21563752 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 21563851  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  21563852 caatacagtgttagagtaacttat 21563875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 24078773 - 24078650
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  24078773 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 24078674  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  24078673 caatacagtgttagagtaacttat 24078650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 26925645 - 26925522
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  26925645 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 26925546  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  26925545 caatacagtgttagagtaacttat 26925522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 28971986 - 28972109
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  28971986 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttaagaagtttaagacttagtaagtttgcattatgatttca 28972085  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||| ||||||||||    
T  28972086 caatacagtgttatagtaacttat 28972109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 43331273 - 43331396
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  43331273 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 43331372  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  43331373 caatacagtgttagagtaacttat 43331396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 51451339 - 51451462
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  51451339 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 51451438  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  51451439 caatacagtgttagagtaacttat 51451462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 575415 - 575277
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||| ||||||||||||||||  |||||||||| |||| ||||||||||||||||||||||| ||||||    
T  575415 agtcaatgacaacccaaatatatgtaacaattggttaggttcgaggctgcttatcaacctacattatccagttgttgagaagtttaagacttagtaagtt 575316  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||| ||||    
T  575315 tgcattatgatttcacaatacagtgttagagtaaattat 575277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 14830921 - 14830783
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||||||||||| ||||||    
T  14830921 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatctggttgttgagaagtttaagacttagtaagtt 14830822  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||| ||||||||||||||||    
T  14830821 tgcattatgatttcacaatacaatgttagagtaacttat 14830783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 200 - 431
Target Start/End: Original strand, 16904172 - 16904415
Alignment:
Q  200 atatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttcacaat 299  Q
    |||||||||||||| |||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  16904172 atatgtaacaattgttcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttcacaat 16904271  T
Q  300 acagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaag 387  Q
    ||||||||||||||| ||           ||||||||||            |||| |||||||||||||| ||||||| |||||| |||| |||||||      
T  16904272 acagtgttagagtaaattattatttcacaatctgatttgattgttttttgaccatatttcttgaattgttctcgtgacgttaacacttctaaagctcaga 16904371  T
Q  388 gtcaaagcatcagtcagaacttaagtcagagttcggcttcttct 431  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  16904372 gtcaaaacatcagtcagaacttaagttagagttcggcttcttct 16904415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 34057975 - 34057837
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||||||| ||| ||||||    
T  34057975 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatctggttgttgagaagtttaagaattagtaagtt 34057876  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  34057875 tgcattatgatttcacaatacagtgttagagtaacttat 34057837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 39715908 - 39715770
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||||   |||||||||| ||||| |||||||||||||||||||||||||||||    
T  39715908 agtcaatggcaacctaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccgattgttgagaagtttaagacttaataagtt 39715809  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||| ||||| ||||    
T  39715808 tgcattatgatttcacaatacagtgttaaagtaaattat 39715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 40621024 - 40621162
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||| |   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  40621024 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctgttcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 40621123  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||| ||||    
T  40621124 tgcattatgatttcacaatacagtgttagagtaaattat 40621162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 47721460 - 47721211
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||||||| |   ||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  47721460 aaatatatgtaacaattggtcaggttcgaggctggtcatcaacctaaatcatctggttgttgagaagtttaagacttagtaagtttgcattatgatttca 47721361  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||||||||||||||||||||           ||||||||||            |||||||| |||||||||| | |||||||||||| ||||||| ||    
T  47721360 aaatacagtgttagagtaacttattatttcacaatctgatttgattgttgtttgaccatgtttattgaattgttgttgtgaccttaacacttctcaaact 47721261  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
     |  |||||||| ||||||||||||||||||||||||| |||||||||||    
T  47721260 tagagtcaaagcttcagtcagaacttaagtcagagttcagcttcttctca 47721211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 15656207 - 15656084
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||| ||||| |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15656207 aaatatatgtaataattgatcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 15656108  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  15656107 caatacagtgttagagtaacttat 15656084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 28136451 - 28136328
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||||||    
T  28136451 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggatgttgaaaagtttaagacttagtaagtttgcattatgatttca 28136352  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  28136351 caatacaatgttagagtaacttat 28136328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 35713502 - 35713259
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||     |||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  35713502 aaatatatgtaacaattggt-----tcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 35713408  T
Q  296 caatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    ||||||||||||||||||| ||           || |||||||           | ||||||||||||||||| |||||||||||||| |||||||||||    
T  35713407 caatacagtgttagagtaaattattatttcacaatttgatttgattgtttttaactatgtttcttgaattgttgtcgtgaccttaacacttctcaagctc 35713308  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  || |||||||||||| |||||||||| |||||||||||||||||||    
T  35713307 agagtgaaagcatcagtctgaacttaagttagagttcggcttcttctca 35713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 19589725 - 19589863
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    |||||||| ||| | ||||| |||||||||||||||||||||||||||| |   ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  19589725 agtcaatggtaacccaaatagatgtaacaattggtcaggttcgaggctgttcatcaacctacatcattcggttgttgaaaagtttaagacttagtaagtt 19589824  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  19589825 tgcattatgatttcacaatacagtgttagagtaacttat 19589863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 36856024 - 36856146
Alignment:
Q  197 aatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttcac 296  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  36856024 aatacatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttcac 36856123  T
Q  297 aatacagtgttagagtaacttat 319  Q
    ||||||||||| ||||| |||||    
T  36856124 aatacagtgttggagtatcttat 36856146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 53341287 - 53341425
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||| ||||||||| |||||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||    
T  53341287 agtcaatgacaacccaaatatatgtaataattggtcacgttcgaggctgctcattaacctacatcatccggttgttgagaagtttaagacttagtaagtt 53341386  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || |||||||||| |||||||||||||||||||||||||    
T  53341387 tgcattatgattttacaatacagtgttagagtaacttat 53341425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 33504398 - 33504260
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||| |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||  ||||||    
T  33504398 agtcaatgacaacccaaatatatgtaacaattgttcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttggtaagtt 33504299  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || |||||||||| |||||||||||| ||||||||||||    
T  33504298 tgcattatgattttacaatacagtgtgagagtaacttat 33504260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 39746256 - 39746118
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||  ||||| ||   |||||||||||||| ||||||||| |||||||||||||| ||| ||    
T  39746256 agtcaatgacaacccaaatatatgtaacaattggtcaggtttaaggcttctcatcaacctacatcatctggttgttgaaaagtttaagacttagtaattt 39746157  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39746156 tgtattatgatttcacaatacagtgttagagtaacttat 39746118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 7645507 - 7645384
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||| | ||||||   ||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||    
T  7645507 aaatatatgtaacaattggtcaggttcaaagctgctcatcaacctacatcatccggttgttgagaactttaatacttagtaagtttgcattatgatttca 7645408  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||| ||||||||    
T  7645407 caatacagtgttagaataacttat 7645384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 1943392 - 1943515
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||| || || |   |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |    
T  1943392 aaatatatgtaacaattggtcaggttcgtggttgttcatcaacctacatcaaccggttgttgagaagtttaagacttagtaagtttgcattatgatttaa 1943491  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  1943492 caatacaatgttagagtaacttat 1943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 40621194 - 40621288
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  40621194 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcataagtcagaacttaagtcagagttcggcttcttctca 40621288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 39715738 - 39715644
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  39715738 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaaacttagagtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 39715644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 575243 - 575151
Alignment:
Q  341 atgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  575243 atgtttcttgaattgttgtcgtgaccttaacactactcaagctcagagtcaaagcatcagtctgaacttaagtcagagttcggcttcttctca 575151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 55999940 - 55999846
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  55999940 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 55999846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 7645352 - 7645258
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| | ||| |||||||||||||||||||| ||||||||||    
T  7645352 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcatagtcaaagctttagttagaacttaagtcagagttcgacttcttctca 7645258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 28972141 - 28972235
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  28972141 ccatgtttcttgaattattgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 28972235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 343 - 433
Target Start/End: Complemental strand, 19832623 - 19832533
Alignment:
Q  343 gtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||| |||||||||||||| ||||||||||||  ||||| || ||||| |||||||||||||||||||| ||||||||||    
T  19832623 gtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaatgcttcagttagaacttaagtcagagttcgacttcttctca 19832533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 39746086 - 39745992
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||| | |||||||||||||||| ||| ||||||||||    
T  39746086 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcaattagaacttaagtcagagctcgacttcttctca 39745992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 53341457 - 53341551
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||  |||||||| ||||| ||||||||||||||||||||  |||||||||    
T  53341457 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaaactcagagtcaaagcttcagttagaacttaagtcagagttcgatttcttctca 53341551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 19589896 - 19589989
Alignment:
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||  |||||||| || |||| ||||||||||| |||||||||||||||||    
T  19589896 catgtttcttgaattgttgtcgtgaacttaacacttctcaagctcagagtcaaagcttccgtcataacttaagtcatagttcggcttcttctca 19589989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 28136295 - 28136202
Alignment:
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||  |||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  28136295 catgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaagcttcagttagaactaaagtcagagttcgacttcttctca 28136202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 13627100 - 13627194
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||  |||||||| ||| | |||||||||||||||||||| ||| ||||||    
T  13627100 ccatgtttcttgaattgttgtcatgaccttaacacttctcaagctcagagtcaaagcttcatttagaacttaagtcagagttcgccttattctca 13627194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 15656052 - 15655958
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| |||||||| |||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  15656052 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagttcagagtcaaaacttcagttagaacttaagtcagagttcgacttcttctca 15655958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 16892042 - 16892148
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||| ||| |||||| ||    ||||||||||| ||| ||||| |||||||||||||||  |||||||| ||||||||||||    
T  16892042 aaatatatgtaacaattggtcaagtttgaggcttctcattaacctacatcacccgattgtttagaagtttaagacttggtaagtttgcattatgatttca 16892141  T
Q  296 caataca 302  Q
    |||||||    
T  16892142 caataca 16892148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 33504228 - 33504134
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||  |||||||| | ||| |||||||||||||||| ||| ||||||||||    
T  33504228 ccatatttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagctttagttagaacttaagtcagagctcgacttcttctca 33504134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 1943547 - 1943636
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttct 428  Q
    |||| |||||||||||||| |||| ||||||||| |||| |||||||  |||||||| |||||||||||||||||| |||||||||||||    
T  1943547 ccatttttcttgaattgttgtcgtaaccttaacacttctgaagctcagagtcaaagcttcagtcagaacttaagtcggagttcggcttct 1943636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 14830751 - 14830658
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| ||||| |||||||||||||| ||||||||||    
T  14830751 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacgtaagtcagagttcgacttcttctca 14830658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 54332882 - 54332788
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||   |||||| | ||||| ||||||||||||| |||||| ||||||||||    
T  54332882 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcggagtcaaaacttcagttagaacttaagtcatagttcgacttcttctca 54332788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 23477952 - 23478045
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||  || |||| |||||| ||||||||||||| |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  23477952 ccatgtttcttgaattgtcgtcatgactttaacacttctcaagctcaaagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 23478045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 5274986 - 5274893
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  5274986 ccatgtttcttaaattgttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 5274893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 34057805 - 34057712
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || |||  |||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  34057805 ccatgtttcttgaattgttgtcatgagtttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 34057712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 10260548 - 10260502
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  10260548 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 10260502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 21563907 - 21563953
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  21563907 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 21563953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 24078618 - 24078572
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  24078618 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 24078572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 26925490 - 26925444
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  26925490 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 26925444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 43331428 - 43331474
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  43331428 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 43331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 51451494 - 51451540
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  51451494 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 51451540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 421
Target Start/End: Original strand, 16892158 - 16892235
Alignment:
Q  344 tttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttc 421  Q
    |||||||||||||| |||||||||||||| || |||||||||  |||||||  ||| ||| ||| |||||||| ||||    
T  16892158 tttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagtttcaatcataacgtaagtcagggttc 16892235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 36856178 - 36856224
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    |||||||| ||| |||||| |||||||||||||| ||||||||||||    
T  36856178 ccatgttttttgcattgttgtcgtgaccttaacacttctcaagctca 36856224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 8241580 - 8241829
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||| |||||   ||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  8241580 aaatatatgtaacaattggtcaggttcgagtctgctcatcaacccacatcatccggttgttaagaagtttaagacttagtaagtttgcattatgatttca 8241679  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||||||           ||||||||||            |||||||||||||||| || |||||||||||||| ||||||||||    
T  8241680 caatacagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattattgtcgtgaccttaacacttctcaagct 8241779  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||| ||||| |||||||||||||||||||||||||||||||    
T  8241780 cagagtcaaagcttcagtaagaacttaagtcagagttcggcttcttctca 8241829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 16494755 - 16495004
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||| |||||||| |||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  16494755 aaatatatgtaacaattagtcaggtttgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 16494854  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  16494855 caatacagtgttagagtaacttattatttcacaatctgatttgattattttttgaccatgtttcttgaattgttatcgtgaccttaacacttctcaagct 16494954  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||||  |||||||||||||||| |||||||||||||||||||    
T  16494955 cagagtcaaagctacagtcagaacttaagttagagttcggcttcttctca 16495004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 5253623 - 5253374
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  5253623 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 5253524  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  5253523 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 5253424  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  5253423 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 5253374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 52841903 - 52841780
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  52841903 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 52841804  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  52841803 caatacagtgttagagtaacttat 52841780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 51247230 - 51247368
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  51247230 agtcaatggcaatccaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 51247329  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || |||||||||||||||| |||||||||||||||||||    
T  51247330 tgcattatgatttcacaatgcagtgttagagtaacttat 51247368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 36168833 - 36168584
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  36168833 aaatatatgtaacaattggtcaggttcaagactgctcatcaacctacatcatccggttgttgagaagtttaagacttggtaagtttgcattatgatttca 36168734  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||||||||||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  36168733 aaatacagtgttagagtaacttattatttcacaatctgatttgattgttgtttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 36168634  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||| ||||||| ||||||||| |||||||| ||||||||||    
T  36168633 cagagtcaaagcttcagtcataacttaagttagagttcgacttcttctca 36168584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 54794335 - 54794086
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||| ||||||| |   |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  54794335 aaatatatgtaacaattggtcaggtttgaggctgttaatcaacctacatcatccggttgttgagaagtttaaggcttagtaagtttgcattatgatttca 54794236  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||||||           ||||||||||            ||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  54794235 caatacagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgagttgttgtcgtgaccttaacacttctcgagct 54794136  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||||  |||||||||||||||| |||||||||||||||||||    
T  54794135 cagagtcaaagctacagtcagaacttaagtgagagttcggcttcttctca 54794086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 6105495 - 6105372
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  6105495 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 6105396  T
Q  296 caatacagtgttagagtaacttat 319  Q
    |||||||||||||||| |||||||    
T  6105395 caatacagtgttagagcaacttat 6105372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 31370398 - 31370275
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  31370398 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 31370299  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  31370298 caatacagtgttagagtaacttat 31370275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 11327038 - 11326900
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| | |||||||||||||| ||||||    
T  11327038 agtcaatgaaaacccaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttaaaaagtttaagacttagtaagtt 11326939  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  11326938 tgcattatgatttcacaatacagtgttagagtaacttat 11326900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 17911147 - 17911009
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||  ||||||    
T  17911147 agtcaatgacaacccaaataaatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttcgtaagtt 17911048  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  17911047 tgcattatgatttcacaatacagtgttagagtaacttat 17911009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 2846128 - 2845879
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||    
T  2846128 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcattcagttgttgagaagtttaagacttagtaagtttgcattatgatttca 2846029  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||||||||||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| |||| |||||    
T  2846028 aaatacagtgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttcttaagct 2845929  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||  ||||| ||||||||||| |||||||| ||||||||||    
T  2845928 cagagtcaaagattcagttagaacttaagttagagttcgacttcttctca 2845879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 35435850 - 35436099
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||| |||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||    
T  35435850 aaatatatgtaacaatttgtcaggttcgaggctgatcatcaacctacatcatccggttgttgagaagtttaagacttggtaagtttgcattataatttca 35435949  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     ||||||||||| |||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  35435950 aaatacagtgttggagtaacttattatttcacaatctgatttgattgttgtttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 35436049  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  |||||||| | |||||||||||||||||||||||||| ||||||||    
T  35436050 cagagtcaaagctttagtcagaacttaagtcagagttcggcctcttctca 35436099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 917573 - 917696
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  917573 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 917672  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  917673 caatacagtgttagagtaacttat 917696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 44074091 - 44073968
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  44074091 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 44073992  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  44073991 caatacagtgttagagtaacttat 44073968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 48975557 - 48975680
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||| ||| |   |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48975557 aaatatatgtaacaattggtcaggttcgagactgttcatcaacctacatcagccggttgttgagaagtttaagacttaataagtttgcattatgatttca 48975656  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  48975657 caatacagtgttagagtaacttat 48975680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 54648891 - 54648768
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  54648891 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttgagacttagtaagtttgcattatgatttca 54648792  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  54648791 caatacaatgttagagtaacttat 54648768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 55296160 - 55296037
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  55296160 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 55296061  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||| ||||    
T  55296060 caatacagtgttagagtaaattat 55296037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 35089231 - 35089093
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||| ||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  35089231 agtcaatggcaatccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 35089132  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || |||||||||| |||||||||||||||||||||||||    
T  35089131 tgcattatgattttacaatacagtgttagagtaacttat 35089093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 21700939 - 21700816
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||    
T  21700939 aaatatatgtaacaattggtcaggttcaaggctgctcgtcaacctacatcatccggttgttgagaagtttaagactgagtaaatttgcattatgatttca 21700840  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||| ||||||||||||||||||    
T  21700839 caatatagtgttagagtaacttat 21700816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 181 - 429
Target Start/End: Complemental strand, 40828323 - 40828063
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   |||||||||| ||||||||||||||||||||||||||| |||| ||    
T  40828323 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacattatccggttgttgagaagtttaagacttgataaatt 40828224  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||| ||||||||||||||| ||           ||||||||||            ||||||||||||||||||| |||| |||||    
T  40828223 tgcattatgatttcacaaaacagtgttagagtaaattattattttacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtaacctt 40828124  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttctt 429  Q
    |||| |||| |||||||  || ||| ||||||||||||||||||| |||||||||||||||    
T  40828123 aacacttcttaagctcagagttaaaacatcagtcagaacttaagttagagttcggcttctt 40828063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 49111947 - 49112070
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  49111947 aaatatatgtaacaattggtcaggtttgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaaatttgcattatgatttca 49112046  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  49112047 caatacaatgttagagtaacttat 49112070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 52854822 - 52854699
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||| ||||||||||||||||||||| |||||||||   |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  52854822 aaatttatgtaacaattggtcaggtttgaggctgctcatcaacctacatcatctggttgttgagaagtttaagacttagtaagtttgcattatgatttca 52854723  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  52854722 caatacagtgttagagtaacttat 52854699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 11952673 - 11952535
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||| |||||||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  11952673 agtcaatgacaaccgaaatatatgtaacaattggttaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 11952574  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||| ||||||||||||| ||||    
T  11952573 tgcattatgatttcacaatatagtgttagagtaaattat 11952535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 22476572 - 22476830
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||||      |||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  22476572 agtcaatgacaacccaaatatatgtaacaattggc-----tcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 22476666  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgacctta 369  Q
    || ||||||||||||||||||||||||||||||| ||           || |||||||           | ||||||||||||||||| |||||||||||    
T  22476667 tgcattatgatttcacaatacagtgttagagtaaattattatttcacaatttgatttgattgtttttaactatgtttcttgaattgttgtcgtgacctta 22476766  T
Q  370 acatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| ||||||||||||  || |||||||||||| |||||||||| |||||||||||||||||||    
T  22476767 acacttctcaagctcagagtgaaagcatcagtctgaacttaagttagagttcggcttcttctca 22476830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 39797711 - 39797588
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  39797711 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 39797612  T
Q  296 caatacagtgttagagtaacttat 319  Q
     |||| ||| ||||||||||||||    
T  39797611 aaatatagtattagagtaacttat 39797588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 12169328 - 12169192
Alignment:
Q  183 tcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttg 282  Q
    ||||||| || | ||||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||||| ||||| ||| ||||    
T  12169328 tcaatgacaacccaaatatatgtaacaattggtcaggttcgaggatgctcatcaacctacatcatctggttgttgagaagtttaatacttagtaattttg 12169229  T
Q  283 tattatgatttcacaatacagtgttagagtaacttat 319  Q
     |||||||||||| |||||||||||||||||||||||    
T  12169228 cattatgatttcaaaatacagtgttagagtaacttat 12169192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 16340548 - 16340668
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||| ||||||  |   ||||||| |||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  16340548 aaatatatgtaacaattggtcaggtttgaggctcat---caacctatatcatccggttgttaagaagtttaagacttagtaagtttgcattatgatttca 16340644  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  16340645 caatacagtgttagagtaacttat 16340668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 23192406 - 23192525
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||| ||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  23192406 aaatatatgtaacaattgatcaagttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 23192505  T
Q  296 caatacagtgttagagtaac 315  Q
     | |||||| ||||||||||    
T  23192506 tagtacagtattagagtaac 23192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 12169160 - 12169066
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  12169160 ccatctttcttgaattgtttttgtgaccttaacacttctcaagctcagagtcaaagcttcagtcagaacttaagtcagagttcggcttcttctca 12169066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 343 - 433
Target Start/End: Complemental strand, 11952499 - 11952409
Alignment:
Q  343 gtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||| |||||||||||||| ||||||||||||  |||||||||| |||| ||||||||||||||||||||||||||||||    
T  11952499 gtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcattagtctgaacttaagtcagagttcggcttcttctca 11952409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 16340700 - 16340794
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  16340700 ccatgttttttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 16340794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 429
Target Start/End: Complemental strand, 39797556 - 39797466
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttctt 429  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  ||||||| |||||||| ||||||||| |||||||||||||||    
T  39797556 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagtatcagtcataacttaagttagagttcggcttctt 39797466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 51247400 - 51247494
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||| ||||||||||||||| ||||||||||    
T  51247400 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaaattaagtcagagttcgacttcttctca 51247494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 55296005 - 55295911
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| | || ||||||||||||    
T  55296005 ccatgtttcttgaattgttgttgtgaccttaacacttctcaagctcaaagtcaaagcatcagtcagaactaaagtcacaatttggcttcttctca 55295911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 23192561 - 23192655
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||| || ||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  23192561 ccatgtttatttaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 23192655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 49112104 - 49112198
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||  |||| ||||||||||||| |||||| ||||||||||    
T  49112104 ccatgtttcttgaattgttgttgtgaccttaacacttctcaagctcaaagtcaaagctacagttagaacttaagtcatagttcgacttcttctca 49112198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 50740393 - 50740482
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttct 428  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| |||||    
T  50740393 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttct 50740482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 339 - 428
Target Start/End: Complemental strand, 50772461 - 50772372
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttct 428  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||  |||||||| ||||| |||||||||||||||||||| |||||    
T  50772461 ccatgtttcttgaattgttgtcgtgaccttaacacttttcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttct 50772372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 344 - 433
Target Start/End: Complemental strand, 52841743 - 52841654
Alignment:
Q  344 tttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||| |||||||||||||| ||||||||||||  |||||||| || |  |||||||||||||||||||| ||||||||||    
T  52841743 tttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcggctagaacttaagtcagagttcgacttcttctca 52841654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 431
Target Start/End: Complemental strand, 17910977 - 17910885
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttct 431  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||||| | ||| | |||||||||||||||||| ||||||||    
T  17910977 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaagctttagttaaaacttaagtcagagttcgacttcttct 17910885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 21700782 - 21700690
Alignment:
Q  341 atgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||| || | ||||||||| ||||||||||||  || ||||| ||||| |||||||||||||||||||| ||||||||||    
T  21700782 atgtttcttgaattgttgtcataaccttaacacttctcaagctcagagttaaagcttcagttagaacttaagtcagagttcgacttcttctca 21700690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 429
Target Start/End: Complemental strand, 52854665 - 52854577
Alignment:
Q  341 atgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttctt 429  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||  |||||||  ||||| |||||||||||||||||| | ||||||    
T  52854665 atgtttcttgaattgttgtcgtgaccttaacacttctcaagctcatagtcaaagtttcagttagaacttaagtcagagtttgacttctt 52854577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 362 - 433
Target Start/End: Complemental strand, 28165282 - 28165211
Alignment:
Q  362 tgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28165282 tgaccttcacacttctcaagctcagagtcaaagcatcagtcagaacttaagtcagagttcggcttattctca 28165211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 11326868 - 11326774
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||  |||||||  ||||| ||||||||||| ||||||||  |||||||||    
T  11326868 ccatgtttcttgaattgttgtcgtgaccttaacacttctgaagctcagagtcaaagattcagttagaacttaagttagagttcgaattcttctca 11326774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 35089061 - 35088967
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | || || ||||||||||||| |||||| ||||||||||    
T  35089061 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaaacttcggttagaacttaagtcatagttcgacttcttctca 35088967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 54648736 - 54648642
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||  |||||||| ||| | ||||||||||||| ||||||  |||||||||    
T  54648736 ccatgtttcttgaattgttgtcatgaccttaacacttctcaagctcagagtcaaagcttcacttagaacttaagtcaaagttcgatttcttctca 54648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 50740297 - 50740360
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||    
T  50740297 tgagaagtttaagacttagtaagtttacattatgagttcacaatacagtgttagagtaacttat 50740360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 50772557 - 50772494
Alignment:
Q  256 tgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||    
T  50772557 tgagaagtttaagacttagtaagtttacattatgagttcacaatacagtgttagagtaacttat 50772494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 18742169 - 18742115
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccg 250  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  18742169 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccg 18742115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 48975712 - 48975806
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||| ||||||||||  |||| |||||| || |||||||| ||   |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  48975712 ccatgttccttgaattgtcgtcgtaaccttagcacttctcaagttcggagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 48975806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 6105339 - 6105247
Alignment:
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||| || || |||| |||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  6105339 catgtttcttgaattcttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 6105247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 31370243 - 31370150
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||| ||||| ||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | |||||||||||||||||| ||||||||||    
T  31370243 ccatggttcttaaattgttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaacttaagtcagagttcgacttcttctca 31370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 917728 - 917774
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  917728 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 917774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 44073936 - 44073890
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  44073936 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 44073890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 8241506 - 8241550
Alignment:
Q  125 tactttgtagttttatcatttgccatctatttatattgagttctt 169  Q
    |||||||||| |||||||||| |||||||||||  ||||||||||    
T  8241506 tactttgtagctttatcatttaccatctatttactttgagttctt 8241550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 2e-53; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 14080214 - 14080076
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14080214 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 14080115  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||||||||||||||||||||    
T  14080114 tgcattatgatttcacaatacagtgttagagtaacttat 14080076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 23967757 - 23967508
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  23967757 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 23967658  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  23967657 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 23967558  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  23967557 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 23967508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 37028587 - 37028836
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  37028587 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 37028686  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  37028687 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 37028786  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  37028787 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 37028836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 42062031 - 42061782
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  42062031 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 42061932  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  42061931 aaatatagtattagagtaacttattatttcacaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 42061832  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  42061831 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 42061782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 44939192 - 44939441
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  44939192 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 44939291  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
     |||| ||| ||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  44939292 aaatatagtattagagtaacttattatttcacaatctgatttgattgtttattgaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 44939391  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  44939392 cagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 44939441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 12759108 - 12759372
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||| |||||||| |||||||||||||||| |   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  12759108 agtcaatgacaacccaaatatatataacaattagtcaggttcgaggctgatcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 12759207  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || |||||||||||||||||| |||||||||||| ||           ||||||||||            ||||||||||||||||||| ||||||||||    
T  12759208 tgcattatgatttcacaatacggtgttagagtaaattattatttcaaaatctgatttgattgttttttgaccatgtttcttgaattgttgtcgtgacctt 12759307  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||    
T  12759308 aacacttctcaagctcagagtcaaagcaacagtcagaacttaagtaagagttcggcttcttctca 12759372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 196 - 431
Target Start/End: Complemental strand, 44384309 - 44384062
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  44384309 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 44384210  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||| ||||||||||||| ||           ||||||||||            |||||||| |||||||||| |||||||||||| | || |||||||    
T  44384209 caatatagtgttagagtaaattattatttcacaatctgatttgattgttttttgaccatgtttattgaattgttgtcgtgaccttaatacttttcaagct 44384110  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttct 431  Q
    ||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  44384109 caaagtcaaagcatcagtcagaacttaagtcacagttcgacttcttct 44384062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 19396715 - 19396593
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  19396715 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgagaagtttaagactt-ataagtttgcattatgatttca 19396617  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  19396616 caatacagtgttagagtaacttat 19396593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 30825074 - 30825197
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  30825074 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 30825173  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  30825174 caatacagtgttagagtaacttat 30825197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 39203245 - 39203509
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||| | |||| |||||||||||||||||||||||||||||| ||||||  |||||| ||| |||| ||| ||||||||||||||| ||| ||||||    
T  39203245 agtcaataacaatcaaaatatatgtaacaattggtcaggttcgagactgcttatcaacctccattatccagttattgagaagtttaagatttagtaagtt 39203344  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||| ||| ||||||||||||           ||||||||||            |||| ||||||||||| || ||||||||||    
T  39203345 tgcattatgatttcacaatatagtattagagtaacttattatttcacaatctgatttgattgtttattgaccatatttcttgaattcttgtcgtgacctt 39203444  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  39203445 aacacttctcaagctcaaagtcaaagcttcagtcagaacttaagtcagagttcggcttcttctca 39203509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 41976087 - 41976335
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||    |||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  41976087 aaatatatgtaacaattggtcaggttcgaggttgctcattaacctacattttccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 41976186  T
Q  296 caatacagtgttagagtaact-----------tatctgatttgnnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagctc 384  Q
    |||| |||||||||||||| |            |||| |||||           ||||||||||||||||||| | |||||||||||| |||||||||||    
T  41976187 caatgcagtgttagagtaaatcattatttcacaatctcatttgattgttttttaccatgtttcttgaattgttgttgtgaccttaacacttctcaagctc 41976286  T
Q  385 aaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  41976287 agagtcaaagcatcagtcagaacttaagtcagagtttggcttcttctca 41976335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 44598394 - 44598517
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  44598394 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttaagaagtttaagacttagtaagtttgcattatgatttca 44598493  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  44598494 caatacagtgttagagtaacttat 44598517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 41155260 - 41155508
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||||||||| |     |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  41155260 aaatatatgtaacaattggtcaggttcgaggctgttcatttacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 41155359  T
Q  296 caatacagtgttagagtaacttat-----------ctgatttgnnnnnnnnncc-ccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||| ||||||||||| ||||           ||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  41155360 caatacaatgttagagtaaattattatttcacaatctgatttgattgtttttttaccatgtttcttgaattgttgtcgtgaccttaacacttctcaagct 41155459  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
     | | ||||||||||||||| |||||||||||||||||||||||||||||    
T  41155460 ta-gatcaaagcatcagtcaaaacttaagtcagagttcggcttcttctca 41155508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 20664297 - 20664174
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  20664297 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 20664198  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  20664197 caatacagtgttagagtaacttat 20664174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 22357814 - 22357691
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| || |||||||||||||||| |||||||| ||||||||||||    
T  22357814 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttctttagaagtttaagacttagtaagtttgcattatgatttca 22357715  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  22357714 caatacagtgttagagtaacttat 22357691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 30549663 - 30549540
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  30549663 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 30549564  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  30549563 caatacagtgttagagtaacttat 30549540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 33425624 - 33425501
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  33425624 aaatatatgtaacaattggtcaggttcgaggttgctcattaacctacatcatccggttgttgagaagtttaagacttagtaagtttggattatgatttca 33425525  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  33425524 caatacagtgttagagtaacttat 33425501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 36603437 - 36603314
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  36603437 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacgtacatcatccggatgttgagaagtttaagacttagtaagtttgcattatgatttca 36603338  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  36603337 caatacagtgttagagtaacttat 36603314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 41627521 - 41627644
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| |  |   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  41627521 aaatatatgtaacaattggtcaggttcgaggtttttcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 41627620  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  41627621 caatacagtgttagagtaacttat 41627644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 41906477 - 41906600
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  41906477 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctatatcatccggttgttgagaagtttaagacttggtaagtttgcattatgatttca 41906576  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||| ||||||||||||||||||    
T  41906577 caataaagtgttagagtaacttat 41906600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 44214413 - 44214290
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  44214413 aaatagatgtaacaattggtcaggttcgaggctgctcatcaacctacatcatccggttgttgaaaagtttaagacttagtaagtttgcattatgatttca 44214314  T
Q  296 caatacagtgttagagtaacttat 319  Q
    |||||| |||||||||||||||||    
T  44214313 caatactgtgttagagtaacttat 44214290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 6301843 - 6301720
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  6301843 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 6301744  T
Q  296 caatacagtgttagagtaacttat 319  Q
     |||| ||| ||||||||||||||    
T  6301743 aaatatagtattagagtaacttat 6301720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 42812334 - 42812196
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||| |||||||||| || |||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  42812334 agtcaatgacaacccaaatatatgtaataattggtcagattagaggctgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtt 42812235  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||| ||||||||||||||||||||| ||||||||    
T  42812234 tgcattataatttcacaatacagtgttagaataacttat 42812196  T

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Target: chr8; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 27629302 - 27629423
Alignment:
Q  198 atatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttcaca 297  Q
    |||||||||||||||||| |||||||||||||||   |||||||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  27629302 atatatgtaacaattggttaggttcgaggctgctcatcaacctacatcatctggttgttgagaagtttaagacttagtaagtttgcattaagatttcaca 27629401  T
Q  298 atacagtgttagagtaacttat 319  Q
    ||| ||||||||||||||||||    
T  27629402 atatagtgttagagtaacttat 27629423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 181 - 433
Target Start/End: Complemental strand, 45295436 - 45295172
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | |||||||||||||||||| ||||||| |||| || |   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  45295436 agtcaatgacaacccaaatatatgtaacaattgatcaggtttgaggttgatcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 45295337  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||| ||||||||||||||           ||||||||||            ||||||| ||||||||||| ||||||||||    
T  45295336 tgcattatgatttcacaatacaatgttagagtaacttattatttcacaatctgatttgattgttttttgaccatgttccttgaattgttgtcgtgacctt 45295237  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    || | |||||||||| |  |||||| ||| |||||||||||||||||||||| || |||||||||    
T  45295236 aaaacttctcaagcttagagtcaaaacattagtcagaacttaagtcagagtttggtttcttctca 45295172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 6301688 - 6301594
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  6301688 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagtatcagtcataacttaagttagagttcggcttcttctca 6301594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 36603282 - 36603188
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  36603282 ccatgtttcttgaattgttatcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 36603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 44598550 - 44598644
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  44598550 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 44598644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 6478705 - 6478611
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  6478705 ccatgcttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagttagaacttaagtcagagttcgacttcttctca 6478611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 19246886 - 19246980
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||  |||||||||||| ||| ||||||||||||||||||| |||||||||    
T  19246886 ccatgtttcttgaattgttgtcgtgaccttaaaacttctcaagctcagagtcaaagcatcattcataacttaagtcagagttcggtttcttctca 19246980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 19320070 - 19320164
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||  |||||||||||| ||| ||||||||||||||||||| |||||||||    
T  19320070 ccatgtttcttgaattgttgtcgtgaccttaaaacttctcaagctcagagtcaaagcatcattcataacttaagtcagagttcggtttcttctca 19320164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 22357659 - 22357565
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||| | ||||||||||    
T  22357659 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcatagtcaaagcttcagttagaacttaagtcagagtttgacttcttctca 22357565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 14080044 - 14079950
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  14080044 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaaacttcagttagaacttaagtcagagttcgacttcttctca 14079950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 42812164 - 42812070
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||||| ||||| ||||||||||| |||||||| ||||||||||    
T  42812164 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcatagtcaaagcttcagttagaacttaagttagagttcgacttcttctca 42812070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 41627676 - 41627770
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| || ||| ||||||||||||   ||||||| ||||| |||||||||||||||||||| ||||||||||    
T  41627676 ccatgtttcttgaattgttgtcgtgacattgacacttctcaagctcagattcaaagcttcagttagaacttaagtcagagttcgacttcttctca 41627770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 27629455 - 27629549
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||  |||||||| ||| |||||| |||||| || ||||| ||||||||||    
T  27629455 ccatgtttcttgaatagttgtcgtgatcttaacatttctcaagctcagagtcaaagcttcaatcagaatttaagttagggttcgacttcttctca 27629549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 33425470 - 33425377
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||||||  |||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  33425470 ccatgtttcttgaattgttgccgtgactttaacacttctcaagctcatagtcaaa-cttcagttagaacttaagtcagagttcgacttcttctca 33425377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 41906632 - 41906726
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||| ||||  |||||||| ||||| |||| |||||||| |||||| ||||||||||    
T  41906632 ccatgtttcttgaattgttatcgtgacattaacacttctcaaactcagagtcaaagcttcagttagaaattaagtcaaagttcgacttcttctca 41906726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 19246810 - 19246854
Alignment:
Q  275 taagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  19246810 taagtttgcgttatgatttcacaatacagtgttagagtaacttat 19246854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 19319994 - 19320038
Alignment:
Q  275 taagtttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  19319994 taagtttgcgttatgatttcacaatacagtgttagagtaacttat 19320038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 29432925 - 29432993
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatcc 249  Q
    ||||||||| || ||||||||||  ||||||||||||||||||||||||||   |||| ||||||||||    
T  29432925 agtcaatgacaacctaaatatatacaacaattggtcaggttcgaggctgctcatcaacttacatcatcc 29432993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 20664142 - 20664096
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  20664142 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 20664096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 30549508 - 30549462
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  30549508 ccatgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 30549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 38961187 - 38961220
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctg 229  Q
    ||||||||||||||||||||||||||||||||||    
T  38961187 aaatatatgtaacaattggtcaggttcgaggctg 38961220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 38991532 - 38991565
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctg 229  Q
    ||||||||||||||||||||||||||||||||||    
T  38991532 aaatatatgtaacaattggtcaggttcgaggctg 38991565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 30825229 - 30825319
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| || |||| |||||| ||||||||||||  |||||| | ||||| | ||||   ||||||||||| ||||||||||    
T  30825229 ccatgtttcttgaattgttgtcatgactttaacacttctcaagctcagagtcaaa-cttcagttaaaact---gtcagagttcgacttcttctca 30825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 44214256 - 44214212
Alignment:
Q  341 atgtttcttgaattgttttcgtgaccttaacatttctcaagctca 385  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||    
T  44214256 atgtttcttgaattgttgtcgtgaacttaacacttctcaagctca 44214212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 429
Target Start/End: Complemental strand, 19396529 - 19396488
Alignment:
Q  388 gtcaaagcatcagtcagaacttaagtcagagttcggcttctt 429  Q
    |||||||| ||||| |||||||||||||||||||| ||||||    
T  19396529 gtcaaagcttcagttagaacttaagtcagagttcgacttctt 19396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 6478776 - 6478736
Alignment:
Q  279 tttgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  6478776 tttgcattatgatttcatattacagtgttagagtaacttat 6478736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 39203186 - 39203230
Alignment:
Q  125 tactttgtagttttatcatttgccatctatttatattgagttctt 169  Q
    |||||||||| |||||||||| |||||||||||  ||||||||||    
T  39203186 tactttgtagctttatcatttaccatctatttaccttgagttctt 39203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 16716 - 16588
Alignment:
Q  191 aatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatga 290  Q
    |||| ||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16716 aatccaaatatatgtaacaattggtcaggttcgaggcttctcatcaacctacatcatccggttgttgagaagtttaagacttaataagtttgcattatga 16617  T
Q  291 tttcacaatacagtgttagagtaacttat 319  Q
    |||||||||||||||||||||||||||||    
T  16616 tttcacaatacagtgttagagtaacttat 16588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 105; Significance: 3e-52; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 153548 - 153299
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||| |||||||| |||| ||||   ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  153548 aaatatatgtaacaattagtcaggtttgaggttgctcatcaacctacatcatccggttgttgagaagtttaagaattagtaagtttgcattatgatttca 153449  T
Q  296 caatacagtgttagagtaactt-----------atctgatttg-nnnnnnnnnccccatgtttcttgaattgttttcgtgaccttaacatttctcaagct 383  Q
    ||||||||||||||||||||||           ||||||||||            ||||||||||||||||||| |||||||||||||| ||||||||||    
T  153448 caatacagtgttagagtaacttattatttcacaatctgatttgattattttttgaccatgtttcttgaattgttatcgtgaccttaacacttctcaagct 153349  T
Q  384 caaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||  ||||||||  |||||||||||||||| |||||||||||||||||||    
T  153348 cagagtcaaagctacagtcagaacttaagttagagttcggcttcttctca 153299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 66008 - 65885
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    |||||||||||||||||||||||||||| || || |   |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |    
T  66008 aaatatatgtaacaattggtcaggttcgtggttgttcatcaacctacatcaaccggttgttgagaagtttaagacttagtaagtttgcattatgatttaa 65909  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||||||||||||||    
T  65908 caatacaatgttagagtaacttat 65885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 339 - 428
Target Start/End: Complemental strand, 65853 - 65764
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttct 428  Q
    |||| |||||||||||||| |||| ||||||||| |||| |||||||  |||||||| |||||||||||||||||| |||||||||||||    
T  65853 ccatttttcttgaattgttgtcgtaaccttaacacttctgaagctcagagtcaaagcttcagtcagaacttaagtcggagttcggcttct 65764  T

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Target: scaffold0005 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 8803 - 8926
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  8803 aaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatccggttgttgagaagtttaagacttagtaagtttgcattatgatttca 8902  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||||||||||||||||||||    
T  8903 caatacagtgttagagtaacttat 8926  T

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Target: scaffold0005; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 8958 - 9051
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||||||||    
T  8958 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacttaagtcagagttcgacttcttctca 9051  T

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Target: scaffold0010 (Bit Score: 96; Significance: 6e-47; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 181 - 433
Target Start/End: Original strand, 118901 - 119165
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||  ||||||||||||||||||||||| ||   || ||||| | |||||||||||||||||||||||||||| ||||||    
T  118901 agtcaatgacaacccaaatatataaaacaattggtcaggttcgaggctactcatcatcctacttgatccggttgttgagaagtttaagacttagtaagtt 119000  T
Q  281 tgtattatgatttcacaatacagtgttagagtaactt-----------atctgatttgnnnnnnnnnc-cccatgtttcttgaattgttttcgtgacctt 368  Q
    || ||||||||||||||||||||||||||||||||||           ||||||||||         |  ||||||||||| |||||||  | |||||||    
T  119001 tgcattatgatttcacaatacagtgttagagtaacttattattttacaatctgatttgattgtttttcgaccatgtttcttcaattgttgccatgacctt 119100  T
Q  369 aacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||||||||||| ||||||||||    
T  119101 aacacttctcaagctcatagtcaaagcttcagtcagaacttaagtcagagttcgacttcttctca 119165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 118592 - 118664
Alignment:
Q  238 cctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttaga 310  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  118592 cctacatgatccggttgttgagaagtttaagacttagtaagtttgcattatgatttcacaatacagtgttaga 118664  T

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Target: scaffold0010; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 49896 - 49989
Alignment:
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||  |||||||| ||||||||| | |||||||||||||| | ||||||||    
T  49896 catgtttcttcaattgttgccgtgaccttaacacttctcaagctcatagtcaaagcttcagtcagagcataagtcagagttcgacgtcttctca 49989  T

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Target: scaffold0010; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 57429 - 57522
Alignment:
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||  |||||||| ||||||||| | |||||||||||||| | ||||||||    
T  57429 catgtttcttcaattgttgccgtgaccttaacacttctcaagctcatagtcaaagcttcagtcagagcataagtcagagttcgacgtcttctca 57522  T

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Target: scaffold0047 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 27755 - 27617
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||||||||||| ||||||    
T  27755 agtcaatgacaacccaaatatatgtaacaattggtcaggttcgaggttgctcatcaacctacatcatctggttgttgagaagtttaagacttagtaagtt 27656  T
Q  281 tgtattatgatttcacaatacagtgttagagtaacttat 319  Q
    || ||||||||||||||||||| ||||||||||||||||    
T  27655 tgcattatgatttcacaatacaatgttagagtaacttat 27617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 27585 - 27492
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||| | ||||| ||||| |||||||||||||| ||||||||||    
T  27585 ccatgtttcttgaattgttgtcgtgactttaacacttctcaagctcagagtcaaa-cttcagttagaacgtaagtcagagttcgacttcttctca 27492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1884 (Bit Score: 84; Significance: 9e-40; HSPs: 2)
Name: scaffold1884
Description:

Target: scaffold1884; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 704 - 827
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||| |||| |||||||||||||||| |||||||| ||||||||||||    
T  704 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctacattatccgggtgttaagaagtttaagacttagtaagtttgcattatgatttca 803  T
Q  296 caatacagtgttagagtaacttat 319  Q
    ||||||| ||||| ||||||||||    
T  804 caatacaatgttaaagtaacttat 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1884; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 433
Target Start/End: Original strand, 862 - 933
Alignment:
Q  362 tgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||| ||||||||||||   ||||||| ||||| |||| ||||||||||||||| ||||||||||    
T  862 tgaccttaacacttctcaagctcagattcaaagcttcagttagaatttaagtcagagttcgacttcttctca 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 48942 - 49065
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||  |||    ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  48942 aaatatatgtaacaattggtcaggttcgagaatgcacatcaacctacatcatccggttgttgagaagtttaagacttagtaaatttgcattatgatttca 49041  T
Q  296 caatacagtgttagagtaacttat 319  Q
     |||||||||||||||||||||||    
T  49042 aaatacagtgttagagtaacttat 49065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 49097 - 49191
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||||| |||||||||||||||||||||||||||||    
T  49097 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaagcttcagtcaaaacttaagtcagagttcggcttcttctca 49191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 64327 - 64356
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgag 225  Q
    ||||||||||||||||||||||||||||||    
T  64327 aaatatatgtaacaattggtcaggttcgag 64356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 84; Significance: 9e-40; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 5634 - 5511
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||| || ||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  5634 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctaaattatctggttgttgagaagtttaagacttagtaagtttgcattatgatttca 5535  T
Q  296 caatacagtgttagagtaacttat 319  Q
    |||||| |||||||||||| ||||    
T  5534 caatacggtgttagagtaaattat 5511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 12083 - 11960
Alignment:
Q  196 aaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttca 295  Q
    ||||||||||||||||||||||||||||||||||||   ||||||| || ||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  12083 aaatatatgtaacaattggtcaggttcgaggctgctcatcaacctaaattatctggttgttgagaagtttaagacttagtaagtttgcattatgatttca 11984  T
Q  296 caatacagtgttagagtaacttat 319  Q
     |||| ||| ||||||||| ||||    
T  11983 aaataaagtattagagtaaattat 11960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 5451 - 5392
Alignment:
Q  374 ttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  5451 ttctcaagcacagagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 5392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 11900 - 11841
Alignment:
Q  374 ttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11900 ttctcaagcacagagtcaaagcatcagtcagaacttaagtcagagttcgacttcttctca 11841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 181 - 314
Target Start/End: Complemental strand, 14241 - 14109
Alignment:
Q  181 agtcaatgataatctaaatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtt 280  Q
    ||||||||| || | ||||| |||||||||||||| |||||||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||    
T  14241 agtcaatgacaacccaaata-atgtaacaattggttaggttcgaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaagtt 14143  T
Q  281 tgtattatgatttcacaatacagtgttagagtaa 314  Q
    || ||||||||||||||||||| || ||||||||    
T  14142 tgcattatgatttcacaatacaatgatagagtaa 14109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 14071 - 13978
Alignment:
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||| ||||| ||||    
T  14071 catgtttcttgaattgttgtcgtgaccttaacaattctcaagctcatagtcaaagcatcagtcaaaacttaagtcagagttcgacttctcctca 13978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 13851 - 13729
Alignment:
Q  197 aatatatgtaacaattggtcaggttcgaggctgcttgccaacctacatcatccggttgttgagaagtttaagacttaataagtttgtattatgatttcac 296  Q
    ||||||||||||||||| |||| ||| ||||||||   |||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  13851 aatatatgtaacaattgatcagattcaaggctgctcatcaacctacattatccggttgttgagaagtttaagacttagtaaatttgcattatgatttcac 13752  T
Q  297 aatacagtgttagagtaacttat 319  Q
    ||||||||||| |||||| ||||    
T  13751 aatacagtgtttgagtaaattat 13729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 13696 - 13601
Alignment:
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagc--atcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||  |||||| |  ||||||| ||||||||||||||||||||||||||||||    
T  13696 catgtttcttgaattgttgtcgtgaccttaacacttctcaagctcagagtcaaaacatatcagtcggaacttaagtcagagttcggcttcttctca 13601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 252 - 433
Target Start/End: Original strand, 231552 - 231745
Alignment:
Q  252 ttgttgagaagtttaagacttaataagtttgtattatgatttcacaatacagtgttagagtaacttat-----------ctgatttgnnnnnnnnncc-c 339  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||           ||||||||            |    
T  231552 ttgttgagaagtttaagacttagtaagtttgcattatgatttcacaatacagtgttagagtaaattattatttcacaatctgatttgattgttttttgac 231651  T
Q  340 catgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||| |||||||||||||| |||||||||||||| || ||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||    
T  231652 catttttcttgaattgttgtcgtgaccttaacacttttcaagcttagagtcaaaacatcagtcagaacttaagtcagagttcggcttcttctca 231745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 188 - 94
Alignment:
Q  339 ccatgtttcttgaattgttttcgtgaccttaacatttctcaagctcaaggtcaaagcatcagtcagaacttaagtcagagttcggcttcttctca 433  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||| || |||| ||||||    
T  188 ccatgtttcttgaattgttgtcgtgaccttaacacttctcaagctcaaagtcaaagcttcagttagaacttaagtcagagatcagcttattctca 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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